Citrus Sinensis ID: 012790
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 456 | 2.2.26 [Sep-21-2011] | |||||||
| Q0WSF1 | 596 | Aldehyde dehydrogenase 22 | yes | no | 0.997 | 0.763 | 0.848 | 0.0 | |
| P38694 | 644 | Putative aldehyde dehydro | yes | no | 0.953 | 0.675 | 0.389 | 2e-86 | |
| Q9P7K9 | 522 | Putative aldehyde dehydro | yes | no | 0.929 | 0.812 | 0.360 | 7e-82 | |
| P12693 | 483 | Aldehyde dehydrogenase OS | N/A | no | 0.844 | 0.797 | 0.324 | 1e-51 | |
| P17202 | 497 | Betaine aldehyde dehydrog | N/A | no | 0.747 | 0.686 | 0.344 | 6e-50 | |
| Q9S795 | 501 | Betaine aldehyde dehydrog | no | no | 0.743 | 0.676 | 0.360 | 2e-49 | |
| Q9I6C8 | 476 | Probable coniferyl aldehy | yes | no | 0.811 | 0.777 | 0.317 | 1e-48 | |
| Q87H52 | 486 | Betaine aldehyde dehydrog | yes | no | 0.734 | 0.689 | 0.330 | 3e-48 | |
| B0V944 | 490 | Betaine aldehyde dehydrog | no | no | 0.728 | 0.677 | 0.347 | 3e-48 | |
| B7I896 | 490 | Betaine aldehyde dehydrog | no | no | 0.728 | 0.677 | 0.347 | 3e-48 |
| >sp|Q0WSF1|AL221_ARATH Aldehyde dehydrogenase 22A1 OS=Arabidopsis thaliana GN=ALDH22A1 PE=2 SV=2 | Back alignment and function desciption |
|---|
Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/455 (84%), Positives = 425/455 (93%)
Query: 1 MVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWN 60
MVDASLGEIMTTCEKITWLLSEGE+WLKPE RSSGR+M+HK ++VEFHPLGV+GAIV WN
Sbjct: 140 MVDASLGEIMTTCEKITWLLSEGERWLKPESRSSGRAMLHKVSRVEFHPLGVIGAIVPWN 199
Query: 61 YPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA 120
YPFHNIFNPMLAAVFSGNGIVIKVSE+ASWSGCFYFRIIQAALAAVGAPENLVDVITGFA
Sbjct: 200 YPFHNIFNPMLAAVFSGNGIVIKVSEHASWSGCFYFRIIQAALAAVGAPENLVDVITGFA 259
Query: 121 ETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQI 180
ETGEALVSSVDK+IFVGS VG+MIMRNA++TLTPVTLELGGKDAFI+C+D DV HVAQ+
Sbjct: 260 ETGEALVSSVDKMIFVGSTAVGKMIMRNAAETLTPVTLELGGKDAFIICEDADVSHVAQV 319
Query: 181 AVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 240
AVR LQSSGQNCAGAERFYVH+DIY F+ QV KIVKSVSAGPPL G+YDMGA+CL EH
Sbjct: 320 AVRGTLQSSGQNCAGAERFYVHKDIYTAFIGQVTKIVKSVSAGPPLTGRYDMGAICLQEH 379
Query: 241 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIM 300
SE LQ+LVNDALDKGAEI RGSFGHL E AVDQYFPPTV++NVNH MK+M+EEAFGPIM
Sbjct: 380 SEHLQSLVNDALDKGAEIAVRGSFGHLGEDAVDQYFPPTVLINVNHNMKIMKEEAFGPIM 439
Query: 301 PIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSL 360
PIM+F+TDEEV+KLANDSRY LGCAVFSGS+HRA++IA+QIQCGVAAINDFASNYMCQSL
Sbjct: 440 PIMQFSTDEEVIKLANDSRYALGCAVFSGSKHRAKQIASQIQCGVAAINDFASNYMCQSL 499
Query: 361 PFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVAENGFEFQESL 420
PFGGVKDSGFGRFAG+EGLRACCLVKSVVEDR+WP IKTKIPKPIQYPVAEN FEFQE+L
Sbjct: 500 PFGGVKDSGFGRFAGIEGLRACCLVKSVVEDRFWPLIKTKIPKPIQYPVAENAFEFQEAL 559
Query: 421 VEALYGLNIWDRLRALVNVLKVLTEQNTPVSSRRN 455
VE LYGLNIWDRLR+L++VLK LT+Q++ VS R
Sbjct: 560 VETLYGLNIWDRLRSLIDVLKFLTDQSSNVSRTRK 594
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Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 3 |
| >sp|P38694|MSC7_YEAST Putative aldehyde dehydrogenase-like protein YHR039C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MSC7 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 320 bits (819), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 180/462 (38%), Positives = 261/462 (56%), Gaps = 27/462 (5%)
Query: 1 MVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI---HKKAKVEFHPLGVVGAIV 57
M+DAS+GEI+ T EKI W + G++ L+P R + +K A++ + PLGV+ +IV
Sbjct: 186 MLDASMGEILVTLEKIQWTIKHGQRALQPSRRPGPTNFFMKWYKGAEIRYEPLGVISSIV 245
Query: 58 SWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVI- 116
SWNYPFHN+ P++AA+F+GN IV+K SE WS F+ +I+ L A +LV +
Sbjct: 246 SWNYPFHNLLGPIIAALFTGNAIVVKCSEQVVWSSEFFVELIRKCLEACDEDPDLVQLCY 305
Query: 117 ----TGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 170
T ++ S I F+GS V I++ A+K+LTPV +ELGGKDAFIV D
Sbjct: 306 CLPPTENDDSANYFTSHPGFKHITFIGSQPVAHYILKCAAKSLTPVVVELGGKDAFIVLD 365
Query: 171 DV-DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAG- 228
++ ++ I +R QSSGQNC G ER V ++ Y + KI+ PL
Sbjct: 366 SAKNLDALSSIIMRGTFQSSGQNCIGIERVIVSKENY----DDLVKILNDRMTANPLRQG 421
Query: 229 -------KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 281
DMGA+ ++L+ LV DA+ KGA +L GS + YF PT++
Sbjct: 422 SDIDHLENVDMGAMISDNRFDELEALVKDAVAKGARLLQGGSRFKHPKYPQGHYFQPTLL 481
Query: 282 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 341
V+V MK+ Q E FGPI+ +MK + V+LAN + +GLG +VF +A +
Sbjct: 482 VDVTPEMKIAQNEVFGPILVMMKAKNTDHCVQLANSAPFGLGGSVFGADIKECNYVANSL 541
Query: 342 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKI 401
Q G AINDFA+ Y+CQ LPFGG+ SG+G+F G EGL C KSV D P++ T+I
Sbjct: 542 QTGNVAINDFATFYVCQ-LPFGGINGSGYGKFGGEEGLLGLCNAKSVCFDT-LPFVSTQI 599
Query: 402 PKPIQYPVAEN--GFEFQESLVEALYGLNIWDRLRALVNVLK 441
PKP+ YP+ N + F +S + Y + W R+++L ++ K
Sbjct: 600 PKPLDYPIRNNAKAWNFVKSFIVGAYTNSTWQRIKSLFSLAK 641
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Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: - |
| >sp|Q9P7K9|YOSF_SCHPO Putative aldehyde dehydrogenase-like protein C21C3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC21C3.15c PE=3 SV=1 | Back alignment and function description |
|---|
Score = 305 bits (780), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 155/430 (36%), Positives = 248/430 (57%), Gaps = 6/430 (1%)
Query: 1 MVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWN 60
+VDA+ GEI+ T EKI W L+ GE+ L+P R + +K V++ PLGV+ A+VSWN
Sbjct: 79 LVDAAFGEILVTLEKINWTLANGEQSLRPTKRPNSLLTSYKGGYVKYEPLGVIAALVSWN 138
Query: 61 YPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA 120
YP HN P+++A+F+GN IV+K SE +WS Y ++++ L ++G LV IT
Sbjct: 139 YPLHNALGPIISALFAGNAIVVKGSELTAWSTHQYCEMVRSLLQSMGHSPELVQCITCLP 198
Query: 121 ETGEALV--SSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVA 178
+ + L S + I F+GS + +++ +A+K LTP+ LELGGKD I+ DD + +
Sbjct: 199 DVADHLTSHSGIKHITFIGSQPIAKLVAASAAKQLTPLCLELGGKDPCILTDDHRLEEIL 258
Query: 179 QIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLL 238
I +R QS+GQNC G ER +Y ++++ + ++ G DMGA+
Sbjct: 259 SIVMRGVFQSAGQNCIGIERIIALDGVYDTIITKLYNRISTMRLGMYTQNDVDMGAMVSN 318
Query: 239 EHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGP 298
+ L++L+ DA+ KGA ++ G + YF PT++V+ + MK+ QEE F P
Sbjct: 319 NRFDHLESLIQDAVSKGARLVYGGHRFQHPKYPKGNYFLPTLLVDATNEMKIAQEECFAP 378
Query: 299 IMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQ 358
I + + + E +++AN + +GLG +VF + + ++ G+ A+NDF + Y+ Q
Sbjct: 379 IALVFRAKSPEHALEIANGTEFGLGASVFGRDKQLCQYFTDNLETGMVAVNDFGAFYLLQ 438
Query: 359 SLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPV--AENGFEF 416
+PFGG K SG+GRFAG EGLR C K++ DR + I T IP + YP+ ++ ++F
Sbjct: 439 -MPFGGCKKSGYGRFAGYEGLRGICNSKAIAYDR-FSAIHTGIPPAVDYPIPDSQKAWQF 496
Query: 417 QESLVEALYG 426
L+ +YG
Sbjct: 497 VRGLMGTVYG 506
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Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: - |
| >sp|P12693|ALDH_PSEOL Aldehyde dehydrogenase OS=Pseudomonas oleovorans GN=alkH PE=2 SV=1 | Back alignment and function description |
|---|
Score = 204 bits (519), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 132/407 (32%), Positives = 201/407 (49%), Gaps = 22/407 (5%)
Query: 3 DASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYP 62
+ L EI ++I + W+KP + S+ +A + + P GV I WNYP
Sbjct: 74 EVKLTEIFPVLQEINHAKRNLKDWMKPRRVRAALSVAGTRAGLRYEPKGVCLIIAPWNYP 133
Query: 63 FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET 122
F+ F P+++A+ +GN +VIK SE + I++ A + +LV V+ G A
Sbjct: 134 FNLSFGPLVSALAAGNSVVIKPSELTPHTATLIGSIVREAFSV-----DLVAVVEGDAAV 188
Query: 123 GEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIA 181
+ L++ D I F GSP VG+++M ASKTL VTLELGGK I+ ++P A+
Sbjct: 189 SQELLALPFDHIFFTGSPRVGKLVMEAASKTLASVTLELGGKSPTIIGPTANLPKAARNI 248
Query: 182 VRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLL--- 238
V ++GQ C + +VHR I F + K + V G A + C +
Sbjct: 249 VWGKFSNNGQTCIAPDHVFVHRCIAQKFNEILVKEIVRVY-GKDFAAQRRSADYCRIVND 307
Query: 239 EHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGP 298
+H ++ L+ DA KGA+IL G A ++ PTV+ NV M + EE FGP
Sbjct: 308 QHFNRINKLLTDAKAKGAKILQGGQVD-----ATERLVVPTVLSNVTAAMDINHEEIFGP 362
Query: 299 IMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQ 358
++PI++++ + V+K ND L VFS + I A+ G +N +++
Sbjct: 363 LLPIIEYDDIDSVIKRVNDGDKPLALYVFSEDKQFVNNIVARTSSGSVGVNLSVVHFLHP 422
Query: 359 SLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRW----W---PYIK 398
+LPFGGV +SG G GV G RA K V+ D++ W PY K
Sbjct: 423 NLPFGGVNNSGIGSAHGVYGFRAFSHEKPVLIDKFSITHWLFPPYTK 469
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Pseudomonas oleovorans (taxid: 301) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P17202|BADH_SPIOL Betaine aldehyde dehydrogenase, chloroplastic OS=Spinacia oleracea PE=1 SV=1 | Back alignment and function description |
|---|
Score = 198 bits (504), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 122/354 (34%), Positives = 187/354 (52%), Gaps = 13/354 (3%)
Query: 42 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 101
K+ V PLGVVG I WNYP + A+ +G V+K SE AS + C F +
Sbjct: 141 KSHVLRQPLGVVGLISPWNYPLLMATWKIAPALAAGCTAVLKPSELASVT-CLEFGEV-- 197
Query: 102 ALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTL 158
VG P +++++TG + G LVS VDKI F GS G +M +A++ + PVTL
Sbjct: 198 -CNEVGLPPGVLNILTGLGPDAGAPLVSHPDVDKIAFTGSSATGSKVMASAAQLVKPVTL 256
Query: 159 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 218
ELGGK +V +DVD+ V + + ++GQ C+ R VH I A FV ++ K K
Sbjct: 257 ELGGKSPIVVFEDVDIDKVVEWTIFGCFWTNGQICSATSRLLVHESIAAEFVDKLVKWTK 316
Query: 219 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFG-HLSEGAVDQYFP 277
++ P +G + +K+ ++ A +GA IL GS HL +G Y
Sbjct: 317 NIKISDPFEEGCRLGPVISKGQYDKIMKFISTAKSEGATILYGGSRPEHLKKG---YYIE 373
Query: 278 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREI 337
PT++ +++ +M++ +EE FGP++ + F++++E + LAND+ YGL AVFS R I
Sbjct: 374 PTIVTDISTSMQIWKEEVFGPVLCVKTFSSEDEAIALANDTEYGLAAAVFSNDLERCERI 433
Query: 338 AAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 391
++ G +N S P+GG+K SGFGR G G++ +K V +D
Sbjct: 434 TKALEVGAVWVN--CSQPCFVQAPWGGIKRSGFGRELGEWGIQNYLNIKQVTQD 485
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Spinacia oleracea (taxid: 3562) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 8 |
| >sp|Q9S795|BADH1_ARATH Betaine aldehyde dehydrogenase 1, chloroplastic OS=Arabidopsis thaliana GN=ALDH10A8 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 197 bits (500), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 127/352 (36%), Positives = 185/352 (52%), Gaps = 13/352 (3%)
Query: 42 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 101
K+ V PLGVVG I WNYP + ++ +G ++K SE AS + C I
Sbjct: 144 KSYVLKQPLGVVGLITPWNYPLLMAVWKVAPSLAAGCTAILKPSELASVT-CLELADI-- 200
Query: 102 ALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTL 158
VG P +++V+TGF +E G L S VDKI F GS G +M A++ + PV++
Sbjct: 201 -CREVGLPPGVLNVLTGFGSEAGAPLASHPGVDKIAFTGSFATGSKVMTAAAQLVKPVSM 259
Query: 159 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 218
ELGGK IV DDVD+ A+ A+ ++GQ C+ R VH I + F+ ++ K K
Sbjct: 260 ELGGKSPLIVFDDVDLDKAAEWALFGCFWTNGQICSATSRLLVHESIASEFIEKLVKWSK 319
Query: 219 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFG-HLSEGAVDQYFP 277
++ P+ +G + EK+ ++ A +GA IL GS HL +G +
Sbjct: 320 NIKISDPMEEGCRLGPVVSKGQYEKILKFISTAKSEGATILHGGSRPEHLEKGF---FIE 376
Query: 278 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREI 337
PT+I +V +M++ +EE FGP++ + F +++E ++LANDS YGLG AV S R I
Sbjct: 377 PTIITDVTTSMQIWREEVFGPVLCVKTFASEDEAIELANDSHYGLGAAVISNDTERCDRI 436
Query: 338 AAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389
+ + G+ IN S P+GGVK SGFGR G GL VK V
Sbjct: 437 SEAFEAGIVWIN--CSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVT 486
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Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 8 |
| >sp|Q9I6C8|CALB_PSEAE Probable coniferyl aldehyde dehydrogenase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=calB PE=3 SV=1 | Back alignment and function description |
|---|
Score = 194 bits (493), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 122/384 (31%), Positives = 191/384 (49%), Gaps = 14/384 (3%)
Query: 6 LGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN 65
L EIM + I + +KW+KP R+ G A+V + PLGVVG IV WNYP
Sbjct: 76 LAEIMPSLHGIHYAAKRVKKWMKPARRAVGLQFQPASAQVVYQPLGVVGVIVPWNYPLFL 135
Query: 66 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEA 125
P+ A+ +GN ++IK+SE+ +G R+++ LA + PE+ V V+ G + G A
Sbjct: 136 SIGPLTGALAAGNRVMIKMSESTPATG----RLLKDLLARI-FPEDQVAVVLGEVDVGVA 190
Query: 126 LVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRA 184
D ++F G+ VG+ +MR A++ LTPVTLELGGK IV D V + A+
Sbjct: 191 FSKLPFDHLLFTGATSVGKHVMRAAAENLTPVTLELGGKSPAIVSDSVPMKDAAERIAFG 250
Query: 185 ALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKL 244
++GQ C + V FVSQ ++V+ P L+ D A+ +L
Sbjct: 251 KSLNAGQTCVAPDYVLVPSRRVEEFVSQYKEVVQGFF--PRLSDNPDYTAIINERQLGRL 308
Query: 245 QNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMK 304
+ ++DA +KGA ++ + G + P T+++NV+ MK+MQEE FGP++P++
Sbjct: 309 RGYLDDAREKGATLVPLFAEGQ------QRRLPQTLLLNVSDDMKVMQEEIFGPLLPVIP 362
Query: 305 FNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGG 364
+ E+ + N L F + + + + + G +ND + +PFGG
Sbjct: 363 YERLEDALAYVNQRPRPLALYYFGYDKAQQQRVLHETHSGGVCLNDTLLHVAQDDIPFGG 422
Query: 365 VKDSGFGRFAGVEGLRACCLVKSV 388
V SG G + G EG K V
Sbjct: 423 VGPSGMGHYHGHEGFLTFSKAKGV 446
|
Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) (taxid: 208964) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 6 EC: 8 |
| >sp|Q87H52|BETB_VIBPA Betaine aldehyde dehydrogenase OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) GN=betB PE=3 SV=1 | Back alignment and function description |
|---|
Score = 193 bits (490), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 114/345 (33%), Positives = 176/345 (51%), Gaps = 10/345 (2%)
Query: 48 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 107
PLG+ I +WNYP A+ +GN ++ K SE + I A G
Sbjct: 138 EPLGICAGIGAWNYPIQIAMWKSAPALAAGNAMIFKPSEETPLTALKLAEIYSEA----G 193
Query: 108 APENLVDVITGFAETGEALVSSVD--KIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 165
P+ + +V+ G G+ L + D K+ F G G G+++M +++KTL VT+ELGGK
Sbjct: 194 LPDGVFNVVQGDYRVGQMLTAHPDIAKVSFTGESGTGKVVMGDSAKTLKQVTMELGGKSP 253
Query: 166 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 225
IV DD + A+ A + G+ C R +VH IY FV+Q+ + + G P
Sbjct: 254 LIVFDDAKLDDAVSAAMVANFYTQGEVCTNGTRVFVHESIYDDFVAQLKTRTEKLVVGDP 313
Query: 226 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF-PPTVIVNV 284
L +GAL EH K+ + + A GA +L G + G + F PTV ++
Sbjct: 314 LDENTQIGALISKEHESKVLSAIESAKASGATLLT-GGYKVTDNGLQNGNFVAPTVFIDC 372
Query: 285 NHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCG 344
+ +M +Q+E FGP+M ++KF+ + EV++ AND+ YGL VF+ + RA + +IQ G
Sbjct: 373 DDSMSHVQQEIFGPVMSVLKFSEEAEVIERANDTDYGLAAGVFTQNLSRAHRVIHKIQAG 432
Query: 345 VAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389
+ +N + + +P GG K SG GR GVE L+ KSV+
Sbjct: 433 ICWVNAWGDS--PAEMPVGGYKQSGIGRENGVETLKHYTQTKSVL 475
|
Vibrio parahaemolyticus (taxid: 670) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 8 |
| >sp|B0V944|BETB_ACIBY Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain AYE) GN=betB PE=3 SV=1 | Back alignment and function description |
|---|
Score = 193 bits (490), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 121/348 (34%), Positives = 177/348 (50%), Gaps = 16/348 (4%)
Query: 48 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 107
PLGVV I +WNYP A+ +GN ++ K SE + I A G
Sbjct: 141 EPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSETTPLTALKLAEIYTEA----G 196
Query: 108 APENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNAS-KTLTPVTLELGGK 163
P+ + +V+ G E G+ L ++KI F G G+ +M +A+ TL VT+ELGGK
Sbjct: 197 LPDGVFNVVQGAGREIGQWLTEHPVIEKISFTGGVETGKKVMASAAGSTLKEVTMELGGK 256
Query: 164 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 223
I+C+D D+ A IAV A SSGQ C R +V + A F V + VK + G
Sbjct: 257 SPLIICEDADLNRAADIAVMANFFSSGQVCTNGTRVFVPKSRLADFEKAVVERVKRIRVG 316
Query: 224 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEIL---ARGSFGHLSEGAVDQYFPPTV 280
P+A + G L H EK+ + + +GA++L R + G L++GA Y PTV
Sbjct: 317 DPMAEDTNFGPLTSFPHMEKVLSFIESGKQQGAKVLIGGGRATEGELAKGA---YVLPTV 373
Query: 281 IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQ 340
+ M ++QEE FGP+M I+ + T+EEV++ AND+ +GL V + RA I Q
Sbjct: 374 FSDCTDQMAIVQEEIFGPVMSILSYETEEEVIQRANDTTFGLAAGVVTQDISRAHRIIHQ 433
Query: 341 IQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 388
I+ G+ IN + + +P GG K SG GR G+ L +KS+
Sbjct: 434 IEAGICWINTWGES--PAEMPVGGYKQSGVGRENGLTTLGHYTRIKSI 479
|
Acinetobacter baumannii (strain AYE) (taxid: 509173) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 8 |
| >sp|B7I896|BETB_ACIB5 Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain AB0057) GN=betB PE=3 SV=1 | Back alignment and function description |
|---|
Score = 193 bits (490), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 121/348 (34%), Positives = 177/348 (50%), Gaps = 16/348 (4%)
Query: 48 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 107
PLGVV I +WNYP A+ +GN ++ K SE + I A G
Sbjct: 141 EPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSETTPLTALKLAEIYTEA----G 196
Query: 108 APENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNAS-KTLTPVTLELGGK 163
P+ + +V+ G E G+ L ++KI F G G+ +M +A+ TL VT+ELGGK
Sbjct: 197 LPDGVFNVVQGAGREIGQWLTEHPVIEKISFTGGVETGKKVMASAAGSTLKEVTMELGGK 256
Query: 164 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 223
I+C+D D+ A IAV A SSGQ C R +V + A F V + VK + G
Sbjct: 257 SPLIICEDADLNRAADIAVMANFFSSGQVCTNGTRVFVPKSRLADFEKAVVERVKRIRVG 316
Query: 224 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEIL---ARGSFGHLSEGAVDQYFPPTV 280
P+A + G L H EK+ + + +GA++L R + G L++GA Y PTV
Sbjct: 317 DPMAEDTNFGPLTSFPHMEKVLSFIESGKQQGAKVLIGGGRATEGELAKGA---YVLPTV 373
Query: 281 IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQ 340
+ M ++QEE FGP+M I+ + T+EEV++ AND+ +GL V + RA I Q
Sbjct: 374 FSDCTDQMAIVQEEIFGPVMSILSYETEEEVIQRANDTTFGLAAGVVTQDISRAHRIIHQ 433
Query: 341 IQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 388
I+ G+ IN + + +P GG K SG GR G+ L +KS+
Sbjct: 434 IEAGICWINTWGES--PAEMPVGGYKQSGVGRENGLTTLGHYTRIKSI 479
|
Acinetobacter baumannii (strain AB0057) (taxid: 480119) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 8 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 456 | ||||||
| 255556370 | 593 | aldehyde dehydrogenase, putative [Ricinu | 0.997 | 0.767 | 0.894 | 0.0 | |
| 225431946 | 593 | PREDICTED: aldehyde dehydrogenase 22A1 [ | 1.0 | 0.768 | 0.875 | 0.0 | |
| 356521770 | 597 | PREDICTED: aldehyde dehydrogenase 22A1-l | 1.0 | 0.763 | 0.864 | 0.0 | |
| 224101571 | 594 | predicted protein [Populus trichocarpa] | 1.0 | 0.767 | 0.868 | 0.0 | |
| 357448941 | 595 | Aldehyde dehydrogenase 22A1 [Medicago tr | 0.995 | 0.763 | 0.863 | 0.0 | |
| 356564784 | 596 | PREDICTED: aldehyde dehydrogenase 22A1-l | 1.0 | 0.765 | 0.857 | 0.0 | |
| 110735945 | 596 | betaine aldehyde dehydrogenase like prot | 0.997 | 0.763 | 0.848 | 0.0 | |
| 42572293 | 596 | aldehyde dehydrogenase 22A1 [Arabidopsis | 0.997 | 0.763 | 0.848 | 0.0 | |
| 218200296 | 611 | hypothetical protein OsI_27412 [Oryza sa | 0.997 | 0.744 | 0.837 | 0.0 | |
| 115474211 | 597 | Os07g0688800 [Oryza sativa Japonica Grou | 0.997 | 0.762 | 0.837 | 0.0 |
| >gi|255556370|ref|XP_002519219.1| aldehyde dehydrogenase, putative [Ricinus communis] gi|223541534|gb|EEF43083.1| aldehyde dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/456 (89%), Positives = 437/456 (95%), Gaps = 1/456 (0%)
Query: 1 MVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWN 60
M+DASLGEIMTTCEKITWLLSEGE+WLKPEYRSSGRSM+HKKAKVEFHPLGV+GAIVSWN
Sbjct: 139 MIDASLGEIMTTCEKITWLLSEGEQWLKPEYRSSGRSMLHKKAKVEFHPLGVIGAIVSWN 198
Query: 61 YPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA 120
YPFHNIFNPMLAAVFSGN IVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD+ITGFA
Sbjct: 199 YPFHNIFNPMLAAVFSGNSIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDIITGFA 258
Query: 121 ETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQI 180
ETGEALVSS DK+IFVGSPGVG+MIMRNA+ TL PVTLELGGKDAFIVC+DVDVPHVAQI
Sbjct: 259 ETGEALVSSADKVIFVGSPGVGKMIMRNAANTLVPVTLELGGKDAFIVCEDVDVPHVAQI 318
Query: 181 AVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 240
AVRAALQSSGQNCAGAERFYVH+DIY+ FVS+VAKIVKSVSAGPPL G+YDMGA+CL EH
Sbjct: 319 AVRAALQSSGQNCAGAERFYVHKDIYSSFVSEVAKIVKSVSAGPPLTGRYDMGAICLQEH 378
Query: 241 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIM 300
S+KLQNLVNDA+DKGA I ARGSFGHL EGAVDQYFPPT++VNVNHTMKLM+EE FGPIM
Sbjct: 379 SDKLQNLVNDAIDKGAVIEARGSFGHLGEGAVDQYFPPTILVNVNHTMKLMREETFGPIM 438
Query: 301 PIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSL 360
PIMKF+TDEE VKLAND RYGLGCAVFSGSQ RA+EIA+QI CGVAAINDFAS YMCQSL
Sbjct: 439 PIMKFSTDEEAVKLANDCRYGLGCAVFSGSQRRAKEIASQIHCGVAAINDFASTYMCQSL 498
Query: 361 PFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVAENGFEFQESL 420
PFGGVKDSGFGRFAG+EGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPV+ENGFEFQESL
Sbjct: 499 PFGGVKDSGFGRFAGIEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVSENGFEFQESL 558
Query: 421 VEALYGLNIWDRLRALVNVLKVLTEQNTPVSSRRND 456
VEALYGLNIWDRLRALVNVLK+L+EQN+ ++RND
Sbjct: 559 VEALYGLNIWDRLRALVNVLKMLSEQNSS-GNKRND 593
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225431946|ref|XP_002277743.1| PREDICTED: aldehyde dehydrogenase 22A1 [Vitis vinifera] gi|296083253|emb|CBI22889.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/458 (87%), Positives = 438/458 (95%), Gaps = 2/458 (0%)
Query: 1 MVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWN 60
MVDASLGEIMTTCEKITWLLSEGE+WLKPEYRS+GRSM+HK AKVEFHPLGV+GAIVSWN
Sbjct: 136 MVDASLGEIMTTCEKITWLLSEGERWLKPEYRSTGRSMLHKTAKVEFHPLGVIGAIVSWN 195
Query: 61 YPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA 120
YPFHNIFNPMLAAVFSGNG+VIKVSE+ASWSGCFY RIIQAALAAVGAPENLVDVITGFA
Sbjct: 196 YPFHNIFNPMLAAVFSGNGVVIKVSEHASWSGCFYLRIIQAALAAVGAPENLVDVITGFA 255
Query: 121 ETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQI 180
ETGEALVSSVDKIIFVGSPGVG+ IMRNAS TL PVTLELGGKDAFIVC+DVDVPHVAQI
Sbjct: 256 ETGEALVSSVDKIIFVGSPGVGKTIMRNASDTLIPVTLELGGKDAFIVCEDVDVPHVAQI 315
Query: 181 AVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 240
AVRAALQSSGQNCAGAERFYVH+DIY+ FV++V +IVKSV+AGPPL+GKYDMGA+C+ EH
Sbjct: 316 AVRAALQSSGQNCAGAERFYVHQDIYSKFVAEVVRIVKSVTAGPPLSGKYDMGAICMQEH 375
Query: 241 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIM 300
SEKLQNLVN+ALDKGAE RGSFG+L E AVDQ+FPPTV+VNVNH+M+LMQEEAFGPI+
Sbjct: 376 SEKLQNLVNEALDKGAEFAGRGSFGNLGEDAVDQFFPPTVLVNVNHSMQLMQEEAFGPIL 435
Query: 301 PIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSL 360
PIMKF++DEEVVKLANDSRYGLGCAVFSGSQ RA+ IA+QI CG+AAINDFAS YMCQSL
Sbjct: 436 PIMKFSSDEEVVKLANDSRYGLGCAVFSGSQRRAKAIASQIHCGMAAINDFASTYMCQSL 495
Query: 361 PFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVAENGFEFQESL 420
PFGGVKDSGFGRFAG+EGLRACCLVKSVVEDRWWP+IKTKIPKPIQYPVA+NGFEFQESL
Sbjct: 496 PFGGVKDSGFGRFAGIEGLRACCLVKSVVEDRWWPFIKTKIPKPIQYPVADNGFEFQESL 555
Query: 421 VEALYGLNIWDRLRALVNVLKVLTEQNTPVSS--RRND 456
VEALYGLN+WDRLRALV+VLK+LTEQNTP +S R+ND
Sbjct: 556 VEALYGLNVWDRLRALVHVLKMLTEQNTPSNSTKRKND 593
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356521770|ref|XP_003529524.1| PREDICTED: aldehyde dehydrogenase 22A1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 837 bits (2161), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/458 (86%), Positives = 432/458 (94%), Gaps = 2/458 (0%)
Query: 1 MVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWN 60
MVDASLGEIMTTCEKI WLLSEGE+WLKPEYRSSGRSM+HK+AKVEFHPLGV+GAIVSWN
Sbjct: 140 MVDASLGEIMTTCEKINWLLSEGEQWLKPEYRSSGRSMLHKRAKVEFHPLGVIGAIVSWN 199
Query: 61 YPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA 120
YPFHNIFNPMLAA+FSGNGIVIK+SE+ASWSGCFYFRIIQ+ALAA+GAPE+LV+VITGFA
Sbjct: 200 YPFHNIFNPMLAAIFSGNGIVIKISEHASWSGCFYFRIIQSALAAIGAPEDLVEVITGFA 259
Query: 121 ETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQI 180
ETGEALVSSVDK+IFVGSPGVG+MIM NAS TL PVTLELGGKDAFIVC+DVD+ HVAQI
Sbjct: 260 ETGEALVSSVDKVIFVGSPGVGKMIMNNASNTLIPVTLELGGKDAFIVCEDVDLDHVAQI 319
Query: 181 AVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 240
AVRA LQSSGQNCAGAERFYVHR+IY+ FVS+V KIVKSV+AGPPL GKYDMGALC+ EH
Sbjct: 320 AVRAVLQSSGQNCAGAERFYVHREIYSSFVSKVTKIVKSVTAGPPLVGKYDMGALCMHEH 379
Query: 241 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIM 300
SEKL+ LVNDALDKGAEI+ARG+ GH+ E AVDQYFPPTVIVNVNHTM+LMQEEAFGPIM
Sbjct: 380 SEKLEGLVNDALDKGAEIVARGNLGHIGEDAVDQYFPPTVIVNVNHTMRLMQEEAFGPIM 439
Query: 301 PIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSL 360
PIMKF++DEEVV+LANDS+YGLGCAVFSG+Q RAREIA+QI GVAA+NDFAS YMCQSL
Sbjct: 440 PIMKFSSDEEVVRLANDSKYGLGCAVFSGNQSRAREIASQIHAGVAAVNDFASTYMCQSL 499
Query: 361 PFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVAENGFEFQESL 420
PFGGVK SGFGRF GVEGLRACCLVK+VVEDRWWP++KTKIPKPIQYPVAENGFEFQESL
Sbjct: 500 PFGGVKHSGFGRFGGVEGLRACCLVKAVVEDRWWPFVKTKIPKPIQYPVAENGFEFQESL 559
Query: 421 VEALYGLNIWDRLRALVNVLKVLTEQNTPVSS--RRND 456
VEALYGL IWDRLRALVNVLK+LTEQN SS RRND
Sbjct: 560 VEALYGLGIWDRLRALVNVLKMLTEQNPGGSSNKRRND 597
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224101571|ref|XP_002312334.1| predicted protein [Populus trichocarpa] gi|222852154|gb|EEE89701.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 833 bits (2152), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/456 (86%), Positives = 425/456 (93%)
Query: 1 MVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWN 60
MVDASLGEIMTTCEKITWLLSEGEKWLKPEYR SGR+M +KK++VEFHPLGV+GAIVSWN
Sbjct: 139 MVDASLGEIMTTCEKITWLLSEGEKWLKPEYRCSGRAMFYKKSRVEFHPLGVIGAIVSWN 198
Query: 61 YPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA 120
YPFHNIFNPMLAAVFSGN IVIKVSENASWSG FYFRIIQAALAAVGAPENLVDVITGFA
Sbjct: 199 YPFHNIFNPMLAAVFSGNSIVIKVSENASWSGLFYFRIIQAALAAVGAPENLVDVITGFA 258
Query: 121 ETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQI 180
ETGEALVSSVDKIIFVGSPGVG+MIMRNAS TL PVTLELGGKD FIVC+D DV HVAQI
Sbjct: 259 ETGEALVSSVDKIIFVGSPGVGKMIMRNASDTLIPVTLELGGKDPFIVCEDADVSHVAQI 318
Query: 181 AVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 240
AVRA LQSSGQNCAGAERFYVHRDIY+ FVS+V KIVKSVS GPPLAG+YDMGA+CL EH
Sbjct: 319 AVRAVLQSSGQNCAGAERFYVHRDIYSSFVSEVTKIVKSVSVGPPLAGRYDMGAICLQEH 378
Query: 241 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIM 300
S+KLQ LVNDAL+KGAEI+ RGSFGHL EGAVDQ++PPTV+VNV+HTMKLMQEE FGP+M
Sbjct: 379 SDKLQILVNDALEKGAEIVVRGSFGHLGEGAVDQFYPPTVLVNVDHTMKLMQEETFGPVM 438
Query: 301 PIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSL 360
PIMKF+TDEE VKLANDSRYGLGCAVFSGSQ RAREIA+QI CGVAA+NDFASNYMCQSL
Sbjct: 439 PIMKFSTDEEAVKLANDSRYGLGCAVFSGSQRRAREIASQIHCGVAAVNDFASNYMCQSL 498
Query: 361 PFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVAENGFEFQESL 420
PFGGVK SGFGRFAGVEGLRACCLVKSVVEDR WPYIKTKIPKPIQYPV EN FEFQ+SL
Sbjct: 499 PFGGVKHSGFGRFAGVEGLRACCLVKSVVEDRLWPYIKTKIPKPIQYPVGENSFEFQQSL 558
Query: 421 VEALYGLNIWDRLRALVNVLKVLTEQNTPVSSRRND 456
VEALYGLNI D+LRA VNVLK+++EQN+ S RN+
Sbjct: 559 VEALYGLNIRDKLRAGVNVLKIMSEQNSSNSKSRNE 594
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357448941|ref|XP_003594746.1| Aldehyde dehydrogenase 22A1 [Medicago truncatula] gi|124359955|gb|ABN07971.1| Aldehyde dehydrogenase [Medicago truncatula] gi|355483794|gb|AES64997.1| Aldehyde dehydrogenase 22A1 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 833 bits (2151), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/454 (86%), Positives = 429/454 (94%)
Query: 1 MVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWN 60
MVDASLGEIMTTCEKI WLLSEGEK LKPEYRSSGRSM+HK+A+VEFHPLGV+GAIVSWN
Sbjct: 140 MVDASLGEIMTTCEKINWLLSEGEKCLKPEYRSSGRSMLHKRARVEFHPLGVIGAIVSWN 199
Query: 61 YPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA 120
YPFHNIFNPMLAAVFSGNGIVIK+SE+ASWSGCFYFRIIQ+ALAA+GAPE+LV+VITGF
Sbjct: 200 YPFHNIFNPMLAAVFSGNGIVIKISEHASWSGCFYFRIIQSALAAIGAPEDLVEVITGFG 259
Query: 121 ETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQI 180
ETGEALVSSVDK+IFVGSPGVG+MIM+NAS+TL PVTLELGGKDAFIVC+DVDV HVAQI
Sbjct: 260 ETGEALVSSVDKVIFVGSPGVGKMIMKNASETLIPVTLELGGKDAFIVCEDVDVDHVAQI 319
Query: 181 AVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 240
AVRA LQS GQNCAGAERFYVHR+IY FVS+V KI+KSV+AGPPLAGKYDMGALC+ EH
Sbjct: 320 AVRAVLQSGGQNCAGAERFYVHRNIYPSFVSKVTKIIKSVTAGPPLAGKYDMGALCMHEH 379
Query: 241 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIM 300
SEKL LVNDALDKGAEI+ARGSFGH+ E AVDQYFPPTVIVNVNH+MKLMQEEAFGPIM
Sbjct: 380 SEKLLGLVNDALDKGAEIVARGSFGHIGEDAVDQYFPPTVIVNVNHSMKLMQEEAFGPIM 439
Query: 301 PIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSL 360
PIMKF++DEEV+KLANDS+YGL CAVFSGSQ AREIA+ I CGVAA+NDFASNYMCQSL
Sbjct: 440 PIMKFSSDEEVIKLANDSKYGLSCAVFSGSQSHAREIASHIHCGVAAVNDFASNYMCQSL 499
Query: 361 PFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVAENGFEFQESL 420
PFGGVK SGFGRF GVEGLRACCLVKSVVEDRWWP+IKTKIPKPIQYPVAENGFEFQESL
Sbjct: 500 PFGGVKHSGFGRFGGVEGLRACCLVKSVVEDRWWPFIKTKIPKPIQYPVAENGFEFQESL 559
Query: 421 VEALYGLNIWDRLRALVNVLKVLTEQNTPVSSRR 454
VEALYGL+IWDRL+ALVNVLK+LTEQN+ +++
Sbjct: 560 VEALYGLSIWDRLQALVNVLKMLTEQNSTGGNKK 593
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356564784|ref|XP_003550628.1| PREDICTED: aldehyde dehydrogenase 22A1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 831 bits (2147), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/457 (85%), Positives = 430/457 (94%), Gaps = 1/457 (0%)
Query: 1 MVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWN 60
MVDASLGEIMTTCEKI WLLSEGE+WLKPEYRSSGRSM+HK+AKVEFHPLGV+GAIVSWN
Sbjct: 140 MVDASLGEIMTTCEKINWLLSEGEQWLKPEYRSSGRSMLHKRAKVEFHPLGVIGAIVSWN 199
Query: 61 YPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA 120
YPFHNIFNPMLAA+FSGNGIVIK+SE+ASWSGCFYFRIIQ+ALAA+GAPE+LV+VITGFA
Sbjct: 200 YPFHNIFNPMLAAIFSGNGIVIKISEHASWSGCFYFRIIQSALAAIGAPEDLVEVITGFA 259
Query: 121 ETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQI 180
ETGEALVSSVDK+IFVGSPGVG+MIM NA+ TLTPVTLELGGKDAFIVC+DVD+ HVAQI
Sbjct: 260 ETGEALVSSVDKVIFVGSPGVGKMIMNNAANTLTPVTLELGGKDAFIVCEDVDLDHVAQI 319
Query: 181 AVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 240
AVRA LQSSGQNCAGAERFYVHR+IY+ FVS V KIVKSV+AGPPL GKYDMGALC+ EH
Sbjct: 320 AVRAVLQSSGQNCAGAERFYVHREIYSSFVSLVTKIVKSVTAGPPLVGKYDMGALCMHEH 379
Query: 241 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIM 300
SEKL+ LVNDALDKGAEI+ARGSFGH+ E AVDQYFPPTVIVNVNHTM+LMQEEAFGPIM
Sbjct: 380 SEKLEGLVNDALDKGAEIVARGSFGHIGEDAVDQYFPPTVIVNVNHTMRLMQEEAFGPIM 439
Query: 301 PIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSL 360
PIMKF++DEEVV+LAN+S+YGLGCAVFSG+Q RAREIA+QI GVAA+NDFAS YMCQSL
Sbjct: 440 PIMKFSSDEEVVRLANESKYGLGCAVFSGNQSRAREIASQIHAGVAAVNDFASTYMCQSL 499
Query: 361 PFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVAENGFEFQESL 420
PFGGVK SGFGRF GVEGLRACCLVK+V EDRWWP++KTKIPKPIQYPVAENGFEFQESL
Sbjct: 500 PFGGVKHSGFGRFGGVEGLRACCLVKAVAEDRWWPFVKTKIPKPIQYPVAENGFEFQESL 559
Query: 421 VEALYGLNIWDRLRALVNVLKVLTEQNT-PVSSRRND 456
VEALYG+ IWDRLRALVNVLK+LTEQ+ RRND
Sbjct: 560 VEALYGIGIWDRLRALVNVLKMLTEQHPGGGGKRRND 596
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|110735945|dbj|BAE99947.1| betaine aldehyde dehydrogenase like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/455 (84%), Positives = 425/455 (93%)
Query: 1 MVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWN 60
MVDASLGEIMTTCEKITWLLSEGE+WLKPE RSSGR+M+HK ++VEFHPLGV+GAIV WN
Sbjct: 140 MVDASLGEIMTTCEKITWLLSEGERWLKPESRSSGRAMLHKVSRVEFHPLGVIGAIVPWN 199
Query: 61 YPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA 120
YPFHNIFNPMLAAVFSGNGIVIKVSE+ASWSGCFYFRIIQAALAAVGAPENLVDVITGFA
Sbjct: 200 YPFHNIFNPMLAAVFSGNGIVIKVSEHASWSGCFYFRIIQAALAAVGAPENLVDVITGFA 259
Query: 121 ETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQI 180
ETGEALVSSVDK+IFVGS VG+MIMRNA++TLTPVTLELGGKDAFI+C+D DV HVAQ+
Sbjct: 260 ETGEALVSSVDKMIFVGSTAVGKMIMRNAAETLTPVTLELGGKDAFIICEDADVSHVAQV 319
Query: 181 AVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 240
AVR LQSSGQNCAGAERFYVH+DIY F+ QV KIVKSVSAGPPL G+YDMGA+CL EH
Sbjct: 320 AVRGTLQSSGQNCAGAERFYVHKDIYTAFIGQVTKIVKSVSAGPPLTGRYDMGAICLQEH 379
Query: 241 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIM 300
SE LQ+LVNDALDKGAEI RGSFGHL E AVDQYFPPTV++NVNH MK+M+EEAFGPIM
Sbjct: 380 SEHLQSLVNDALDKGAEIAVRGSFGHLGEDAVDQYFPPTVLINVNHNMKIMKEEAFGPIM 439
Query: 301 PIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSL 360
PIM+F+TDEEV+KLANDSRY LGCAVFSGS+HRA++IA+QIQCGVAAINDFASNYMCQSL
Sbjct: 440 PIMQFSTDEEVIKLANDSRYALGCAVFSGSKHRAKQIASQIQCGVAAINDFASNYMCQSL 499
Query: 361 PFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVAENGFEFQESL 420
PFGGVKDSGFGRFAG+EGLRACCLVKSVVEDR+WP IKTKIPKPIQYPVAEN FEFQE+L
Sbjct: 500 PFGGVKDSGFGRFAGIEGLRACCLVKSVVEDRFWPLIKTKIPKPIQYPVAENAFEFQEAL 559
Query: 421 VEALYGLNIWDRLRALVNVLKVLTEQNTPVSSRRN 455
VE LYGLNIWDRLR+L++VLK LT+Q++ VS R
Sbjct: 560 VETLYGLNIWDRLRSLIDVLKFLTDQSSNVSRTRK 594
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|42572293|ref|NP_974242.1| aldehyde dehydrogenase 22A1 [Arabidopsis thaliana] gi|118595572|sp|Q0WSF1.2|AL221_ARATH RecName: Full=Aldehyde dehydrogenase 22A1; AltName: Full=Novel aldehyde dehydrogenase family 22 member A1; Flags: Precursor gi|42406419|emb|CAE48165.1| putative aldehyde dehydrogenase [Arabidopsis thaliana] gi|332640912|gb|AEE74433.1| aldehyde dehydrogenase 22A1 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/455 (84%), Positives = 425/455 (93%)
Query: 1 MVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWN 60
MVDASLGEIMTTCEKITWLLSEGE+WLKPE RSSGR+M+HK ++VEFHPLGV+GAIV WN
Sbjct: 140 MVDASLGEIMTTCEKITWLLSEGERWLKPESRSSGRAMLHKVSRVEFHPLGVIGAIVPWN 199
Query: 61 YPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA 120
YPFHNIFNPMLAAVFSGNGIVIKVSE+ASWSGCFYFRIIQAALAAVGAPENLVDVITGFA
Sbjct: 200 YPFHNIFNPMLAAVFSGNGIVIKVSEHASWSGCFYFRIIQAALAAVGAPENLVDVITGFA 259
Query: 121 ETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQI 180
ETGEALVSSVDK+IFVGS VG+MIMRNA++TLTPVTLELGGKDAFI+C+D DV HVAQ+
Sbjct: 260 ETGEALVSSVDKMIFVGSTAVGKMIMRNAAETLTPVTLELGGKDAFIICEDADVSHVAQV 319
Query: 181 AVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 240
AVR LQSSGQNCAGAERFYVH+DIY F+ QV KIVKSVSAGPPL G+YDMGA+CL EH
Sbjct: 320 AVRGTLQSSGQNCAGAERFYVHKDIYTAFIGQVTKIVKSVSAGPPLTGRYDMGAICLQEH 379
Query: 241 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIM 300
SE LQ+LVNDALDKGAEI RGSFGHL E AVDQYFPPTV++NVNH MK+M+EEAFGPIM
Sbjct: 380 SEHLQSLVNDALDKGAEIAVRGSFGHLGEDAVDQYFPPTVLINVNHNMKIMKEEAFGPIM 439
Query: 301 PIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSL 360
PIM+F+TDEEV+KLANDSRY LGCAVFSGS+HRA++IA+QIQCGVAAINDFASNYMCQSL
Sbjct: 440 PIMQFSTDEEVIKLANDSRYALGCAVFSGSKHRAKQIASQIQCGVAAINDFASNYMCQSL 499
Query: 361 PFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVAENGFEFQESL 420
PFGGVKDSGFGRFAG+EGLRACCLVKSVVEDR+WP IKTKIPKPIQYPVAEN FEFQE+L
Sbjct: 500 PFGGVKDSGFGRFAGIEGLRACCLVKSVVEDRFWPLIKTKIPKPIQYPVAENAFEFQEAL 559
Query: 421 VEALYGLNIWDRLRALVNVLKVLTEQNTPVSSRRN 455
VE LYGLNIWDRLR+L++VLK LT+Q++ VS R
Sbjct: 560 VETLYGLNIWDRLRSLIDVLKFLTDQSSNVSRTRK 594
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|218200296|gb|EEC82723.1| hypothetical protein OsI_27412 [Oryza sativa Indica Group] gi|222637721|gb|EEE67853.1| hypothetical protein OsJ_25656 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
Score = 825 bits (2130), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/456 (83%), Positives = 429/456 (94%), Gaps = 1/456 (0%)
Query: 1 MVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWN 60
MVDASLGEIMTTCEKITWLL EGEKWLKPEYRS GRSM+HKKAKVEF+PLGV+GAIVSWN
Sbjct: 154 MVDASLGEIMTTCEKITWLLDEGEKWLKPEYRSCGRSMLHKKAKVEFYPLGVIGAIVSWN 213
Query: 61 YPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA 120
YPFHN+FNPMLAA+FSGN VIKVSE+ASWSGCFYFRIIQAALAAVGAP+NLV +ITGFA
Sbjct: 214 YPFHNVFNPMLAAIFSGNAAVIKVSEHASWSGCFYFRIIQAALAAVGAPDNLVHIITGFA 273
Query: 121 ETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQI 180
ETG+ALVSSVDKIIFVGSPGVGRMIM AS TL PVTLELGGKDAFIVC+DVD+P V Q+
Sbjct: 274 ETGQALVSSVDKIIFVGSPGVGRMIMNRASDTLIPVTLELGGKDAFIVCEDVDLPSVVQV 333
Query: 181 AVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 240
AVRAALQSSGQNCAGAERFYVH+DIY+ FVSQV KI+KS+S GPPL+G+YDMGA+C++EH
Sbjct: 334 AVRAALQSSGQNCAGAERFYVHKDIYSTFVSQVVKIIKSISVGPPLSGRYDMGAICMIEH 393
Query: 241 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIM 300
SEKLQNLVNDA+DKGAEI RGSFGHL E AVDQ+FPPTV+VNVNHTMK+MQEEAFGPI+
Sbjct: 394 SEKLQNLVNDAVDKGAEIAGRGSFGHLGEDAVDQFFPPTVLVNVNHTMKIMQEEAFGPIL 453
Query: 301 PIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSL 360
PIMKFN+DEEVVKLANDS+YGLGCAVFSG+Q RA +IA+Q+ CGVAAINDFAS+YMCQSL
Sbjct: 454 PIMKFNSDEEVVKLANDSKYGLGCAVFSGNQKRAIKIASQLHCGVAAINDFASSYMCQSL 513
Query: 361 PFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVAENGFEFQESL 420
PFGGVKDSGFGRFAGVEGLRACCLVK+VVEDRWWPY+KT IPKPIQYPV+ENGFEFQE L
Sbjct: 514 PFGGVKDSGFGRFAGVEGLRACCLVKAVVEDRWWPYVKTMIPKPIQYPVSENGFEFQELL 573
Query: 421 VEALYGLNIWDRLRALVNVLKVLTEQ-NTPVSSRRN 455
VE LYGL++WDRLR+LVN+LK+++EQ N+P ++R+
Sbjct: 574 VETLYGLSVWDRLRSLVNLLKMISEQNNSPANTRKK 609
|
Source: Oryza sativa Indica Group Species: Oryza sativa Genus: Oryza Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|115474211|ref|NP_001060704.1| Os07g0688800 [Oryza sativa Japonica Group] gi|24059891|dbj|BAC21357.1| betaine aldehyde dehydrogenase-like [Oryza sativa Japonica Group] gi|50509286|dbj|BAD30593.1| betaine aldehyde dehydrogenase-like [Oryza sativa Japonica Group] gi|113612240|dbj|BAF22618.1| Os07g0688800 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
Score = 824 bits (2129), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/456 (83%), Positives = 429/456 (94%), Gaps = 1/456 (0%)
Query: 1 MVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWN 60
MVDASLGEIMTTCEKITWLL EGEKWLKPEYRS GRSM+HKKAKVEF+PLGV+GAIVSWN
Sbjct: 140 MVDASLGEIMTTCEKITWLLDEGEKWLKPEYRSCGRSMLHKKAKVEFYPLGVIGAIVSWN 199
Query: 61 YPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA 120
YPFHN+FNPMLAA+FSGN VIKVSE+ASWSGCFYFRIIQAALAAVGAP+NLV +ITGFA
Sbjct: 200 YPFHNVFNPMLAAIFSGNAAVIKVSEHASWSGCFYFRIIQAALAAVGAPDNLVHIITGFA 259
Query: 121 ETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQI 180
ETG+ALVSSVDKIIFVGSPGVGRMIM AS TL PVTLELGGKDAFIVC+DVD+P V Q+
Sbjct: 260 ETGQALVSSVDKIIFVGSPGVGRMIMNRASDTLIPVTLELGGKDAFIVCEDVDLPSVVQV 319
Query: 181 AVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 240
AVRAALQSSGQNCAGAERFYVH+DIY+ FVSQV KI+KS+S GPPL+G+YDMGA+C++EH
Sbjct: 320 AVRAALQSSGQNCAGAERFYVHKDIYSTFVSQVVKIIKSISVGPPLSGRYDMGAICMIEH 379
Query: 241 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIM 300
SEKLQNLVNDA+DKGAEI RGSFGHL E AVDQ+FPPTV+VNVNHTMK+MQEEAFGPI+
Sbjct: 380 SEKLQNLVNDAVDKGAEIAGRGSFGHLGEDAVDQFFPPTVLVNVNHTMKIMQEEAFGPIL 439
Query: 301 PIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSL 360
PIMKFN+DEEVVKLANDS+YGLGCAVFSG+Q RA +IA+Q+ CGVAAINDFAS+YMCQSL
Sbjct: 440 PIMKFNSDEEVVKLANDSKYGLGCAVFSGNQKRAIKIASQLHCGVAAINDFASSYMCQSL 499
Query: 361 PFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVAENGFEFQESL 420
PFGGVKDSGFGRFAGVEGLRACCLVK+VVEDRWWPY+KT IPKPIQYPV+ENGFEFQE L
Sbjct: 500 PFGGVKDSGFGRFAGVEGLRACCLVKAVVEDRWWPYVKTMIPKPIQYPVSENGFEFQELL 559
Query: 421 VEALYGLNIWDRLRALVNVLKVLTEQ-NTPVSSRRN 455
VE LYGL++WDRLR+LVN+LK+++EQ N+P ++R+
Sbjct: 560 VETLYGLSVWDRLRSLVNLLKMISEQNNSPANTRKK 595
|
Source: Oryza sativa Japonica Group Species: Oryza sativa Genus: Oryza Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 456 | ||||||
| TAIR|locus:2103425 | 596 | ALDH22A1 "AT3G66658" [Arabidop | 0.995 | 0.761 | 0.850 | 1.6e-214 | |
| DICTYBASE|DDB_G0279613 | 589 | DDB_G0279613 "aldehyde dehydro | 0.947 | 0.733 | 0.421 | 1.1e-92 | |
| UNIPROTKB|G5EHY1 | 632 | MGCH7_ch7g516 "Succinate-semia | 0.960 | 0.693 | 0.413 | 2.3e-87 | |
| CGD|CAL0001732 | 614 | orf19.1865 [Candida albicans ( | 0.953 | 0.708 | 0.397 | 1.3e-86 | |
| SGD|S000001081 | 644 | MSC7 "Protein of unknown funct | 0.951 | 0.673 | 0.395 | 2.5e-81 | |
| POMBASE|SPBC21C3.15c | 522 | SPBC21C3.15c "aldehyde dehydro | 0.927 | 0.810 | 0.364 | 3.4e-77 | |
| UNIPROTKB|P96405 | 487 | MT0233 "PROBABLE ALDEHYDE DEHY | 0.817 | 0.765 | 0.325 | 8.5e-49 | |
| TAIR|locus:2027186 | 501 | ALDH10A8 "AT1G74920" [Arabidop | 0.754 | 0.686 | 0.359 | 1.4e-48 | |
| TIGR_CMR|CBU_1204 | 458 | CBU_1204 "aldehyde dehydrogena | 0.798 | 0.794 | 0.306 | 2.3e-48 | |
| TAIR|locus:2034855 | 534 | ALDH2B7 "AT1G23800" [Arabidops | 0.723 | 0.617 | 0.349 | 9.8e-48 |
| TAIR|locus:2103425 ALDH22A1 "AT3G66658" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2073 (734.8 bits), Expect = 1.6e-214, P = 1.6e-214
Identities = 386/454 (85%), Positives = 425/454 (93%)
Query: 1 MVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWN 60
MVDASLGEIMTTCEKITWLLSEGE+WLKPE RSSGR+M+HK ++VEFHPLGV+GAIV WN
Sbjct: 140 MVDASLGEIMTTCEKITWLLSEGERWLKPESRSSGRAMLHKVSRVEFHPLGVIGAIVPWN 199
Query: 61 YPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA 120
YPFHNIFNPMLAAVFSGNGIVIKVSE+ASWSGCFYFRIIQAALAAVGAPENLVDVITGFA
Sbjct: 200 YPFHNIFNPMLAAVFSGNGIVIKVSEHASWSGCFYFRIIQAALAAVGAPENLVDVITGFA 259
Query: 121 ETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQI 180
ETGEALVSSVDK+IFVGS VG+MIMRNA++TLTPVTLELGGKDAFI+C+D DV HVAQ+
Sbjct: 260 ETGEALVSSVDKMIFVGSTAVGKMIMRNAAETLTPVTLELGGKDAFIICEDADVSHVAQV 319
Query: 181 AVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 240
AVR LQSSGQNCAGAERFYVH+DIY F+ QV KIVKSVSAGPPL G+YDMGA+CL EH
Sbjct: 320 AVRGTLQSSGQNCAGAERFYVHKDIYTAFIGQVTKIVKSVSAGPPLTGRYDMGAICLQEH 379
Query: 241 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIM 300
SE LQ+LVNDALDKGAEI RGSFGHL E AVDQYFPPTV++NVNH MK+M+EEAFGPIM
Sbjct: 380 SEHLQSLVNDALDKGAEIAVRGSFGHLGEDAVDQYFPPTVLINVNHNMKIMKEEAFGPIM 439
Query: 301 PIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSL 360
PIM+F+TDEEV+KLANDSRY LGCAVFSGS+HRA++IA+QIQCGVAAINDFASNYMCQSL
Sbjct: 440 PIMQFSTDEEVIKLANDSRYALGCAVFSGSKHRAKQIASQIQCGVAAINDFASNYMCQSL 499
Query: 361 PFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVAENGFEFQESL 420
PFGGVKDSGFGRFAG+EGLRACCLVKSVVEDR+WP IKTKIPKPIQYPVAEN FEFQE+L
Sbjct: 500 PFGGVKDSGFGRFAGIEGLRACCLVKSVVEDRFWPLIKTKIPKPIQYPVAENAFEFQEAL 559
Query: 421 VEALYGLNIWDRLRALVNVLKVLTEQNTPVSSRR 454
VE LYGLNIWDRLR+L++VLK LT+Q++ VS R
Sbjct: 560 VETLYGLNIWDRLRSLIDVLKFLTDQSSNVSRTR 593
|
|
| DICTYBASE|DDB_G0279613 DDB_G0279613 "aldehyde dehydrogenase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 923 (330.0 bits), Expect = 1.1e-92, P = 1.1e-92
Identities = 184/437 (42%), Positives = 270/437 (61%)
Query: 3 DASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYP 62
+A GEI+T+CEK+ +L+ GEK LK E R M K A++E+HPLGV+G I+ WNYP
Sbjct: 144 EAMFGEILTSCEKLRYLIQNGEKALKTEDRIVPMLMGTKSARLEYHPLGVIGIIIPWNYP 203
Query: 63 FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET 122
H+I + AA+F+GN ++KVSE ++ S + +++ L+ G NL+ ++ G ET
Sbjct: 204 IHSIISAAAAAIFAGNAALVKVSEWSTHSKILFEHLLRKVLSNRGYDPNLIQILPGMGET 263
Query: 123 GEALV-SSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIA 181
GEALV S VDKI+F+GSPG G+ +M+ AS +LTPV LELGGKD IV DDV++ I
Sbjct: 264 GEALVRSGVDKILFIGSPGTGKRVMKAASDSLTPVILELGGKDPMIVFDDVELDWALAIV 323
Query: 182 VRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241
R + GQNC +ER +VH IY F Q+A + S+ GPP G +D G++ +
Sbjct: 324 QRGCFINLGQNCISSERVFVHEKIYDQFCKQMADKINSLKQGPPEEGHFDFGSMTMPAQV 383
Query: 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMP 301
+K+++LV A+ +GA +LA G YF PTV+ NV M + QEEAFGP+
Sbjct: 384 DKVEHLVGTAIKEGATLLAGGKRNPAYPKG--NYFLPTVLANVTENMTIFQEEAFGPVCS 441
Query: 302 IMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLP 361
I+KF+ + ++++ AN + +GLGC++ S RA I ++I G+ IND+ ++Y+ Q LP
Sbjct: 442 IIKFSDEHDLIRKANGTAFGLGCSILSSDIKRAERIGSKISTGMLTINDYGASYLIQDLP 501
Query: 362 FGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVAENGFEFQESLV 421
FGG K+SGFGRF G EGLR S++ DR+ IKT +P+ I+YP+ +
Sbjct: 502 FGGCKESGFGRFNGPEGLRGFSREVSILTDRFG--IKTPVPRLIRYPIDPASVGIIRQAI 559
Query: 422 EALYGLNIWDRLRALVN 438
+Y I ++LRA +N
Sbjct: 560 YMIYQRGIVNKLRAALN 576
|
|
| UNIPROTKB|G5EHY1 MGCH7_ch7g516 "Succinate-semialdehyde dehydrogenase" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
Score = 873 (312.4 bits), Expect = 2.3e-87, P = 2.3e-87
Identities = 187/452 (41%), Positives = 274/452 (60%)
Query: 1 MVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWN 60
MVDA LGEI+ T EK+ W ++ GEK L+PE R + M++K+ V + PLGV+ A+VSWN
Sbjct: 182 MVDAQLGEILVTVEKLQWTIAHGEKALRPERRPTNLLMMYKRNSVHYEPLGVIAALVSWN 241
Query: 61 YPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA 120
YPFHN+ P+++A+F+GNGI++KVSEN +WS ++ I + AL A G +L+ + +
Sbjct: 242 YPFHNLLGPIISAIFAGNGILVKVSENTAWSSSYFASIARGALFAHGYDPSLIQTVACWP 301
Query: 121 ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV--DVPH 176
+ + S + I F+GS V + +A+K LTPV ELGGKDAFIV D D+
Sbjct: 302 QVAGHITSHKGISHITFIGSQAVAHKVAESAAKVLTPVCAELGGKDAFIVLDSAAKDLNR 361
Query: 177 VAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP-PLAGKYDMGAL 235
+ ++ +R QS+GQNC G ER +Y V +A+ V+ + GP PL D+GA+
Sbjct: 362 IVEMMLRGTFQSAGQNCIGIERIIATPAVYDRIVLALAERVRGLRVGPGPLDA--DVGAM 419
Query: 236 CLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEA 295
++L++LV DA+ GA +LA G + YF PT++V+V M L +EE
Sbjct: 420 VSDASFDRLEHLVADAVRCGARLLAGGKRLIHPQHPSGHYFTPTLVVDVTPDMALAREEC 479
Query: 296 FGPIMPIMKF--NTDEEVVKLANDSRYGLGCAVFS-GSQHRAREIAAQIQCGVAAINDFA 352
FGPIM +M+ NT + V+ +AN +GLG +VF S +E+ ++ G+ A+NDFA
Sbjct: 480 FGPIMTLMRAPANTAKAVLDVANAPDFGLGGSVFGRDSDPVLKEVVRGLRTGMVAVNDFA 539
Query: 353 SNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR-WWPYIKTKIPKPIQYPVAE 411
+ Y Q LPFGGV SG+GRFAG EGLR KS+ EDR W ++T IP P++YPV +
Sbjct: 540 TYYAVQ-LPFGGVGGSGYGRFAGEEGLRGISNAKSICEDRAGWLGVRTAIPPPMRYPVRD 598
Query: 412 N--GFEFQESLVEALYGLNIWDRLRALVNVLK 441
+ F + +VE YGL + ++R LV + K
Sbjct: 599 QDRSWRFAKGVVELGYGLTLGAKVRGLVGLAK 630
|
|
| CGD|CAL0001732 orf19.1865 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
Score = 866 (309.9 bits), Expect = 1.3e-86, P = 1.3e-86
Identities = 180/453 (39%), Positives = 270/453 (59%)
Query: 2 VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI---HKKAKVEFHPLGVVGAIVS 58
+DAS+GEIM T EK+ W++S GEK L+P R + + K A+V + P+GVV +IVS
Sbjct: 160 LDASMGEIMVTLEKLNWIISHGEKVLRPSQRPGPANFLIGMMKNAEVRYEPMGVVTSIVS 219
Query: 59 WNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITG 118
WNYPFHN+ P++A++F+GN I++K SEN WS ++ + ++ L + ENLV +
Sbjct: 220 WNYPFHNLMGPVIASLFTGNAIIVKCSENVVWSSQWFIKFVRKCLQELDIDENLVQLCCC 279
Query: 119 FAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV-DVP 175
F E VS + I F+GS V ++ A+K LTP +ELGGKDA IV DDV DV
Sbjct: 280 FPNDAEYFVSHPGLSHITFIGSKNVAHHVVSQAAKQLTPCVVELGGKDALIVLDDVKDVQ 339
Query: 176 HVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL--AGKYDMG 233
++ + +R QS+GQNC G ER +Y V + +KS G + + DMG
Sbjct: 340 SLSSVILRGTFQSAGQNCIGVERVICLPKVYEQLVEIFTERIKSFRVGSDIDQLDEIDMG 399
Query: 234 ALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQE 293
A+ +L+ L+ DA+ KGA ++ G YF PT++V+V+ TMK+ QE
Sbjct: 400 AMISDNRFAQLEGLIEDAVSKGARLIHGGKQYQHPNYPQGHYFEPTLLVDVDPTMKIFQE 459
Query: 294 EAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFAS 353
E FGP++ +++ N E+ V +AN + +GLG ++F + ++ +IA Q+Q G AINDFA+
Sbjct: 460 EVFGPVLTMIRANDAEDAVNIANGTEFGLGNSIFGSNFNQVNQIADQLQSGNVAINDFAT 519
Query: 354 NYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIK-----TKIPKPIQYP 408
Y+ Q LPFGG+K SG+G+F G EGL C KSV+ D+ P ++ T IP PI YP
Sbjct: 520 FYVAQ-LPFGGIKQSGYGKFGGEEGLTGLCNAKSVIMDK--PLLRLFGVATSIPPPIDYP 576
Query: 409 VAEN--GFEFQESLVEALYGLNIWDRLRALVNV 439
+ + + F +SL A Y +W++++AL N+
Sbjct: 577 IENDKKAWNFVKSLNIAGYDGRLWNKVKALKNL 609
|
|
| SGD|S000001081 MSC7 "Protein of unknown function" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
|---|
Score = 816 (292.3 bits), Expect = 2.5e-81, P = 2.5e-81
Identities = 183/463 (39%), Positives = 266/463 (57%)
Query: 1 MVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI---HKKAKVEFHPLGVVGAIV 57
M+DAS+GEI+ T EKI W + G++ L+P R + +K A++ + PLGV+ +IV
Sbjct: 186 MLDASMGEILVTLEKIQWTIKHGQRALQPSRRPGPTNFFMKWYKGAEIRYEPLGVISSIV 245
Query: 58 SWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVI- 116
SWNYPFHN+ P++AA+F+GN IV+K SE WS F+ +I+ L A +LV +
Sbjct: 246 SWNYPFHNLLGPIIAALFTGNAIVVKCSEQVVWSSEFFVELIRKCLEACDEDPDLVQLCY 305
Query: 117 ----TGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 170
T ++ S I F+GS V I++ A+K+LTPV +ELGGKDAFIV D
Sbjct: 306 CLPPTENDDSANYFTSHPGFKHITFIGSQPVAHYILKCAAKSLTPVVVELGGKDAFIVLD 365
Query: 171 DV-DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS-VSAGPPLAG 228
++ ++ I +R QSSGQNC G ER V ++ Y + KI+ ++A P G
Sbjct: 366 SAKNLDALSSIIMRGTFQSSGQNCIGIERVIVSKENY----DDLVKILNDRMTANPLRQG 421
Query: 229 K-------YDMGALCLLEHSEKLQNLVNDALDKGAEILARGS-FGHLSEGAVDQYFPPTV 280
DMGA+ ++L+ LV DA+ KGA +L GS F H + YF PT+
Sbjct: 422 SDIDHLENVDMGAMISDNRFDELEALVKDAVAKGARLLQGGSRFKH-PKYPQGHYFQPTL 480
Query: 281 IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQ 340
+V+V MK+ Q E FGPI+ +MK + V+LAN + +GLG +VF +A
Sbjct: 481 LVDVTPEMKIAQNEVFGPILVMMKAKNTDHCVQLANSAPFGLGGSVFGADIKECNYVANS 540
Query: 341 IQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTK 400
+Q G AINDFA+ Y+CQ LPFGG+ SG+G+F G EGL C KSV D P++ T+
Sbjct: 541 LQTGNVAINDFATFYVCQ-LPFGGINGSGYGKFGGEEGLLGLCNAKSVCFDTL-PFVSTQ 598
Query: 401 IPKPIQYPVAENG--FEFQESLVEALYGLNIWDRLRALVNVLK 441
IPKP+ YP+ N + F +S + Y + W R+++L ++ K
Sbjct: 599 IPKPLDYPIRNNAKAWNFVKSFIVGAYTNSTWQRIKSLFSLAK 641
|
|
| POMBASE|SPBC21C3.15c SPBC21C3.15c "aldehyde dehydrogenase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 777 (278.6 bits), Expect = 3.4e-77, P = 3.4e-77
Identities = 157/431 (36%), Positives = 250/431 (58%)
Query: 1 MVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWN 60
+VDA+ GEI+ T EKI W L+ GE+ L+P R + +K V++ PLGV+ A+VSWN
Sbjct: 79 LVDAAFGEILVTLEKINWTLANGEQSLRPTKRPNSLLTSYKGGYVKYEPLGVIAALVSWN 138
Query: 61 YPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA 120
YP HN P+++A+F+GN IV+K SE +WS Y ++++ L ++G LV IT
Sbjct: 139 YPLHNALGPIISALFAGNAIVVKGSELTAWSTHQYCEMVRSLLQSMGHSPELVQCITCLP 198
Query: 121 ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVA 178
+ + L S + I F+GS + +++ +A+K LTP+ LELGGKD I+ DD + +
Sbjct: 199 DVADHLTSHSGIKHITFIGSQPIAKLVAASAAKQLTPLCLELGGKDPCILTDDHRLEEIL 258
Query: 179 QIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLL 238
I +R QS+GQNC G ER +Y ++++ + ++ G DMGA+
Sbjct: 259 SIVMRGVFQSAGQNCIGIERIIALDGVYDTIITKLYNRISTMRLGMYTQNDVDMGAMVSN 318
Query: 239 EHSEKLQNLVNDALDKGAEILARGS-FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFG 297
+ L++L+ DA+ KGA ++ G F H + YF PT++V+ + MK+ QEE F
Sbjct: 319 NRFDHLESLIQDAVSKGARLVYGGHRFQH-PKYPKGNYFLPTLLVDATNEMKIAQEECFA 377
Query: 298 PIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMC 357
PI + + + E +++AN + +GLG +VF + + ++ G+ A+NDF + Y+
Sbjct: 378 PIALVFRAKSPEHALEIANGTEFGLGASVFGRDKQLCQYFTDNLETGMVAVNDFGAFYLL 437
Query: 358 QSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPV--AENGFE 415
Q +PFGG K SG+GRFAG EGLR C K++ DR+ I T IP + YP+ ++ ++
Sbjct: 438 Q-MPFGGCKKSGYGRFAGYEGLRGICNSKAIAYDRF-SAIHTGIPPAVDYPIPDSQKAWQ 495
Query: 416 FQESLVEALYG 426
F L+ +YG
Sbjct: 496 FVRGLMGTVYG 506
|
|
| UNIPROTKB|P96405 MT0233 "PROBABLE ALDEHYDE DEHYDROGENASE" [Mycobacterium tuberculosis (taxid:1773)] | Back alignment and assigned GO terms |
|---|
Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
Identities = 131/403 (32%), Positives = 210/403 (52%)
Query: 1 MVDASLGEIMTTCEKITWLLSEG---------EK--WLKPEYRSSGRSMIHKKAKVEFHP 49
++ A G+ T E + W+ S G +K W + S G+S++ ++ P
Sbjct: 93 LLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTGSYGQSIVSRE------P 146
Query: 50 LGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 109
+GVVGAIV+WN P N + A+ +G IV+K + + + A VG P
Sbjct: 147 VGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTA----NALAEVFAEVGLP 202
Query: 110 ENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFI 167
E ++ V+ G ETG+AL S+ +D F GS VGR + R A++ L P TLELGGK A I
Sbjct: 203 EGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAEMLKPCTLELGGKSAAI 262
Query: 168 VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA 227
+ +DVD+ + V + + ++GQ C R R Y V+ V V ++ GPP
Sbjct: 263 ILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSD 322
Query: 228 GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF-PPTVIVNVNH 286
+G L + +++ + +++GA ++ G G EG + +F PTV +V++
Sbjct: 323 PAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGG--GR-PEGLDNGFFIQPTVFADVDN 379
Query: 287 TMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVA 346
M + QEE FGP++ I+ ++T+E+ + +ANDS YGL +V++ + +I+ QI+ G
Sbjct: 380 KMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTY 439
Query: 347 AINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389
IN +A + PFGG K+SG GR G EG+ KSV+
Sbjct: 440 GINWYAFD---PGSPFGGYKNSGIGRENGPEGVEHFTQQKSVL 479
|
|
| TAIR|locus:2027186 ALDH10A8 "AT1G74920" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 130/362 (35%), Positives = 188/362 (51%)
Query: 42 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 101
K+ V PLGVVG I WNYP + ++ +G ++K SE AS + C I
Sbjct: 144 KSYVLKQPLGVVGLITPWNYPLLMAVWKVAPSLAAGCTAILKPSELASVT-CLELADI-- 200
Query: 102 ALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTL 158
VG P +++V+TGF +E G L S VDKI F GS G +M A++ + PV++
Sbjct: 201 -CREVGLPPGVLNVLTGFGSEAGAPLASHPGVDKIAFTGSFATGSKVMTAAAQLVKPVSM 259
Query: 159 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 218
ELGGK IV DDVD+ A+ A+ ++GQ C+ R VH I + F+ ++ K K
Sbjct: 260 ELGGKSPLIVFDDVDLDKAAEWALFGCFWTNGQICSATSRLLVHESIASEFIEKLVKWSK 319
Query: 219 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFG-HLSEGAVDQYFP 277
++ P+ +G + EK+ ++ A +GA IL GS HL +G +
Sbjct: 320 NIKISDPMEEGCRLGPVVSKGQYEKILKFISTAKSEGATILHGGSRPEHLEKGF---FIE 376
Query: 278 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREI 337
PT+I +V +M++ +EE FGP++ + F +++E ++LANDS YGLG AV S R I
Sbjct: 377 PTIITDVTTSMQIWREEVFGPVLCVKTFASEDEAIELANDSHYGLGAAVISNDTERCDRI 436
Query: 338 AAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV----EDRW 393
+ + G+ IN S P+GGVK SGFGR G GL VK V D W
Sbjct: 437 SEAFEAGIVWIN--CSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTLYTSNDPW 494
Query: 394 -W 394
W
Sbjct: 495 GW 496
|
|
| TIGR_CMR|CBU_1204 CBU_1204 "aldehyde dehydrogenase family protein" [Coxiella burnetii RSA 493 (taxid:227377)] | Back alignment and assigned GO terms |
|---|
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 118/385 (30%), Positives = 200/385 (51%)
Query: 14 EKITWLLS----EGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 69
EK W+ E LKP ++ KK+ V + P GV+ I+ WN+P +F
Sbjct: 88 EKCAWVCDYYADHAEALLKPRIVNTD----WKKSYVTYQPSGVIFGIMPWNFPLWQVFRF 143
Query: 70 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS- 128
+ +G+G ++K + ++ + ++IQ+A P+N+ + E ++S
Sbjct: 144 AAPNLMAGHGCLLKHASISTGTALAIEKLIQSA----DLPDNIFRTLVINTEKASDVISH 199
Query: 129 -SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQ 187
+ + GS G G+ + A K L V LELGG DA+++ D D+ A+ V + L
Sbjct: 200 PKISAVTLTGSEGAGKAVGSAAGKALKKVVLELGGNDAYLILKDADLEKAAEACVESRLS 259
Query: 188 SSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNL 247
+SGQ+C A+R + ++Y F + V + +S G PL + ++G L + + +
Sbjct: 260 NSGQSCIAAKRLIIVENVYDEFKALVIEKAQSYRMGDPLKKETELGPLARSDLRDTVHGQ 319
Query: 248 VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNT 307
V +++DKGA +L G G + E Y+PPTV+ V +E FGP++ +++
Sbjct: 320 VRESIDKGA-LLETG--GEIPESK-GFYYPPTVLSGVRAGQPAFDDEVFGPVIALIRAKD 375
Query: 308 DEEVVKLANDSRYGLGCAVFSGSQHRAREIAA-QIQCGVAAINDFASNYMCQSLPFGGVK 366
++ +++AN+S++GLG AVF+ R +IAA ++Q G +N F + LPFGGVK
Sbjct: 376 EKHAIEIANNSKFGLGAAVFTNDNERGEKIAASELQAGTCVVNTFVKSD--PRLPFGGVK 433
Query: 367 DSGFGRFAGVEGLRACCLVKSVVED 391
SG+GR EG+R+ VK+VV D
Sbjct: 434 HSGYGRELAAEGIRSFMNVKTVVVD 458
|
|
| TAIR|locus:2034855 ALDH2B7 "AT1G23800" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 121/346 (34%), Positives = 181/346 (52%)
Query: 49 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 108
P+GV G I+ WN+P + + A+ GN +V+K +E S +++ A G
Sbjct: 191 PIGVAGQIIPWNFPLLMLSWKLGPALACGNTVVLKTAEQTPLSALLVGKLLHEA----GL 246
Query: 109 PENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGKD 164
P+ +V++++GF T A ++S VDK+ F GS VG++I+ ASK+ L VTLELGGK
Sbjct: 247 PDGVVNIVSGFGATAGAAIASHMDVDKVAFTGSTDVGKIILELASKSNLKAVTLELGGKS 306
Query: 165 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQV-AKIVKSVSAG 223
FIVC+D DV ++A A + GQ C R +VH +Y FV + A+ +K + G
Sbjct: 307 PFIVCEDADVDQAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKR-NVG 365
Query: 224 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVN 283
P + G E K+ + ++ GA + A G L G+ Y PTV +
Sbjct: 366 DPFKSGIEQGPQVDSEQFNKILKYIKHGVEAGATLQAGGD--RL--GSKGYYIQPTVFSD 421
Query: 284 VNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQC 343
V M + +E FGP+ I+KF +EV+ AN+SRYGL VF+ + A + ++
Sbjct: 422 VKDDMLIATDEIFGPVQTILKFKDLDEVIARANNSRYGLAAGVFTQNLDTAHRLMRALRV 481
Query: 344 GVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389
G IN F + + S+PFGG K SG GR G+ L VK+VV
Sbjct: 482 GTVWINCF--DVLDASIPFGGYKMSGIGREKGIYSLNNYLQVKAVV 525
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q0WSF1 | AL221_ARATH | 1, ., 2, ., 1, ., 3 | 0.8483 | 0.9978 | 0.7634 | yes | no |
| Q9P7K9 | YOSF_SCHPO | 1, ., 2, ., 1, ., - | 0.3604 | 0.9298 | 0.8122 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.2.1 | 0.976 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 456 | |||
| cd07098 | 465 | cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil | 0.0 | |
| cd07078 | 432 | cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog | 1e-137 | |
| cd07099 | 453 | cd07099, ALDH_DDALDH, Methylomonas sp | 1e-135 | |
| pfam00171 | 459 | pfam00171, Aldedh, Aldehyde dehydrogenase family | 1e-120 | |
| COG1012 | 472 | COG1012, PutA, NAD-dependent aldehyde dehydrogenas | 1e-117 | |
| cd07114 | 457 | cd07114, ALDH_DhaS, Uncharacterized Candidatus pel | 1e-95 | |
| cd07103 | 451 | cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina | 9e-95 | |
| cd07106 | 446 | cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac | 2e-94 | |
| cd07102 | 452 | cd07102, ALDH_EDX86601, Uncharacterized aldehyde d | 1e-89 | |
| cd07100 | 429 | cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul | 1e-88 | |
| cd07089 | 459 | cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6- | 6e-87 | |
| cd07101 | 454 | cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul | 3e-86 | |
| cd07104 | 431 | cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P) | 6e-85 | |
| PRK09407 | 524 | PRK09407, gabD2, succinic semialdehyde dehydrogena | 3e-83 | |
| cd07091 | 476 | cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH | 3e-83 | |
| cd07093 | 455 | cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen | 4e-83 | |
| cd07112 | 462 | cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+ | 9e-81 | |
| cd07133 | 434 | cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd | 7e-80 | |
| cd07109 | 454 | cd07109, ALDH_AAS00426, Uncharacterized Saccharopo | 1e-79 | |
| cd07090 | 457 | cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy | 3e-79 | |
| cd07138 | 466 | cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox | 1e-77 | |
| cd07115 | 453 | cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens | 2e-77 | |
| cd07139 | 471 | cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo | 5e-77 | |
| cd07150 | 451 | cd07150, ALDH_VaniDH_like, Pseudomonas putida vani | 2e-76 | |
| cd07105 | 432 | cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena | 6e-76 | |
| cd07145 | 456 | cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu | 5e-75 | |
| cd07144 | 484 | cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi | 2e-74 | |
| cd07134 | 433 | cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy | 8e-74 | |
| cd07088 | 468 | cd07088, ALDH_LactADH-AldA, Escherichia coli lacta | 9e-74 | |
| cd07119 | 482 | cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de | 1e-73 | |
| cd07149 | 453 | cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi | 3e-73 | |
| cd07559 | 480 | cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu | 5e-73 | |
| cd07141 | 481 | cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin | 9e-73 | |
| cd07087 | 426 | cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: | 1e-71 | |
| cd07110 | 456 | cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy | 1e-71 | |
| cd07107 | 456 | cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben | 2e-71 | |
| cd07146 | 451 | cd07146, ALDH_PhpJ, Streptomyces putative phosphon | 2e-71 | |
| PLN02278 | 498 | PLN02278, PLN02278, succinic semialdehyde dehydrog | 2e-71 | |
| cd07131 | 478 | cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi | 4e-71 | |
| cd07082 | 473 | cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph | 6e-71 | |
| TIGR01804 | 467 | TIGR01804, BADH, glycine betaine aldehyde dehydrog | 7e-70 | |
| cd07092 | 450 | cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d | 5e-69 | |
| cd07117 | 475 | cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo | 8e-69 | |
| cd07152 | 443 | cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde | 9e-69 | |
| PRK13252 | 488 | PRK13252, PRK13252, betaine aldehyde dehydrogenase | 1e-68 | |
| cd07142 | 476 | cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen | 3e-68 | |
| cd07151 | 465 | cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb | 9e-68 | |
| PRK13473 | 475 | PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd | 1e-67 | |
| PLN02467 | 503 | PLN02467, PLN02467, betaine aldehyde dehydrogenase | 2e-67 | |
| cd07086 | 478 | cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha | 2e-66 | |
| cd07135 | 436 | cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia | 3e-66 | |
| cd07120 | 455 | cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al | 4e-65 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 2e-64 | |
| PLN02766 | 501 | PLN02766, PLN02766, coniferyl-aldehyde dehydrogena | 3e-64 | |
| PRK10090 | 409 | PRK10090, PRK10090, aldehyde dehydrogenase A; Prov | 3e-64 | |
| TIGR01780 | 448 | TIGR01780, SSADH, succinate-semialdehyde dehydroge | 7e-64 | |
| cd07143 | 481 | cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al | 9e-64 | |
| cd07113 | 477 | cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep | 3e-63 | |
| cd07108 | 457 | cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d | 3e-62 | |
| cd07118 | 454 | cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos | 1e-61 | |
| cd07111 | 480 | cd07111, ALDH_F16, Aldehyde dehydrogenase family 1 | 2e-61 | |
| PLN02466 | 538 | PLN02466, PLN02466, aldehyde dehydrogenase family | 5e-61 | |
| cd07136 | 449 | cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh | 7e-61 | |
| cd07094 | 453 | cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA | 2e-60 | |
| cd07147 | 452 | cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f | 3e-60 | |
| TIGR03216 | 481 | TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia | 4e-60 | |
| PTZ00381 | 493 | PTZ00381, PTZ00381, aldehyde dehydrogenase family | 4e-59 | |
| cd07116 | 479 | cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD | 1e-57 | |
| TIGR03250 | 472 | TIGR03250, PhnAcAld_DH, putative phosphonoacetalde | 2e-57 | |
| TIGR02299 | 488 | TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate | 2e-57 | |
| cd07124 | 512 | cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline- | 1e-54 | |
| cd07097 | 473 | cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+ | 1e-54 | |
| TIGR04284 | 480 | TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, | 3e-54 | |
| cd07132 | 443 | cd07132, ALDH_F3AB, Aldehyde dehydrogenase family | 4e-53 | |
| cd07137 | 432 | cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase | 2e-52 | |
| PRK09406 | 457 | PRK09406, gabD1, succinic semialdehyde dehydrogena | 5e-51 | |
| PLN02203 | 484 | PLN02203, PLN02203, aldehyde dehydrogenase | 8e-51 | |
| PRK11241 | 482 | PRK11241, gabD, succinate-semialdehyde dehydrogena | 6e-50 | |
| PRK13968 | 462 | PRK13968, PRK13968, putative succinate semialdehyd | 1e-48 | |
| cd07140 | 486 | cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate | 1e-48 | |
| PRK09847 | 494 | PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty | 4e-48 | |
| TIGR03374 | 472 | TIGR03374, ABALDH, 1-pyrroline dehydrogenase | 2e-45 | |
| cd07095 | 431 | cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem | 1e-43 | |
| PRK03137 | 514 | PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy | 4e-43 | |
| PLN02174 | 484 | PLN02174, PLN02174, aldehyde dehydrogenase family | 1e-41 | |
| cd07085 | 478 | cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd | 9e-41 | |
| cd07130 | 474 | cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin | 1e-40 | |
| TIGR01237 | 511 | TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb | 6e-40 | |
| PLN00412 | 496 | PLN00412, PLN00412, NADP-dependent glyceraldehyde- | 2e-37 | |
| cd07083 | 500 | cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent | 2e-36 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 4e-36 | |
| cd07125 | 518 | cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car | 2e-35 | |
| PLN02315 | 508 | PLN02315, PLN02315, aldehyde dehydrogenase family | 1e-30 | |
| TIGR01722 | 477 | TIGR01722, MMSDH, methylmalonic acid semialdehyde | 2e-30 | |
| PRK09457 | 487 | PRK09457, astD, succinylglutamic semialdehyde dehy | 9e-29 | |
| cd07148 | 455 | cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031 | 6e-28 | |
| TIGR03240 | 484 | TIGR03240, arg_catab_astD, succinylglutamic semial | 9e-27 | |
| TIGR01238 | 500 | TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb | 6e-23 | |
| cd07123 | 522 | cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca | 2e-22 | |
| PLN02419 | 604 | PLN02419, PLN02419, methylmalonate-semialdehyde de | 4e-22 | |
| TIGR01236 | 532 | TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb | 1e-20 | |
| COG4230 | 769 | COG4230, COG4230, Delta 1-pyrroline-5-carboxylate | 2e-19 | |
| PRK11904 | 1038 | PRK11904, PRK11904, bifunctional proline dehydroge | 2e-19 | |
| cd07084 | 442 | cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+ | 8e-15 | |
| PRK11905 | 1208 | PRK11905, PRK11905, bifunctional proline dehydroge | 1e-14 | |
| TIGR02278 | 663 | TIGR02278, PaaN-DH, phenylacetic acid degradation | 5e-11 | |
| PRK11809 | 1318 | PRK11809, putA, trifunctional transcriptional regu | 7e-11 | |
| cd07126 | 489 | cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carb | 1e-08 | |
| cd07128 | 513 | cd07128, ALDH_MaoC-N, N-terminal domain of the mon | 5e-08 | |
| cd07129 | 454 | cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdeh | 8e-07 | |
| cd07122 | 436 | cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldeh | 6e-05 | |
| PRK11903 | 521 | PRK11903, PRK11903, aldehyde dehydrogenase; Provis | 8e-05 | |
| cd07121 | 429 | cd07121, ALDH_EutE, Ethanolamine utilization prote | 8e-05 | |
| TIGR02288 | 551 | TIGR02288, PaaN_2, phenylacetic acid degradation p | 4e-04 | |
| PRK11563 | 675 | PRK11563, PRK11563, bifunctional aldehyde dehydrog | 0.001 | |
| cd07081 | 439 | cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acyla | 0.002 | |
| cd07127 | 549 | cd07127, ALDH_PAD-PaaZ, Phenylacetic acid degradat | 0.002 | |
| PRK15398 | 465 | PRK15398, PRK15398, aldehyde dehydrogenase EutE; P | 0.004 |
| >gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Score = 650 bits (1679), Expect = 0.0
Identities = 211/394 (53%), Positives = 266/394 (67%), Gaps = 2/394 (0%)
Query: 1 MVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWN 60
MVDASLGEI+ TCEKI W L GEK L+PE R G M +K+A+VE+ PLGVVGAIVSWN
Sbjct: 72 MVDASLGEILVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWN 131
Query: 61 YPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA 120
YPFHN+ P++AA+F+GN IV+KVSE +WS F+ II+ LAA G +LV ++T
Sbjct: 132 YPFHNLLGPIIAALFAGNAIVVKVSEQVAWSSGFFLSIIRECLAACGHDPDLVQLVTCLP 191
Query: 121 ETGEALVSSV--DKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVA 178
ET EAL S D I F+GSP VG+ +M A+++LTPV LELGGKD IV DD D+ +A
Sbjct: 192 ETAEALTSHPVIDHITFIGSPPVGKKVMAAAAESLTPVVLELGGKDPAIVLDDADLDQIA 251
Query: 179 QIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLL 238
I +R QSSGQNC G ER VH IY + + V+++ GPPL G D+GA+
Sbjct: 252 SIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISP 311
Query: 239 EHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGP 298
++L+ LV DA++KGA +LA G E YFPPT++V+V MK+ QEE FGP
Sbjct: 312 ARFDRLEELVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGP 371
Query: 299 IMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQ 358
+M +MK + DEE V++AN + YGLG +VF RAR IA+Q++ G+ AINDF NY Q
Sbjct: 372 VMVVMKASDDEEAVEIANSTEYGLGASVFGKDIKRARRIASQLETGMVAINDFGVNYYVQ 431
Query: 359 SLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 392
LPFGGVK SGFGRFAG EGLR C KSV EDR
Sbjct: 432 QLPFGGVKGSGFGRFAGEEGLRGLCNPKSVTEDR 465
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465 |
| >gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 400 bits (1029), Expect = e-137
Identities = 140/390 (35%), Positives = 200/390 (51%), Gaps = 14/390 (3%)
Query: 4 ASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPF 63
+LGE+ + + + S + A V PLGVVGAI WN+P
Sbjct: 54 EALGEVARAADTFRYYAGLARRLHGEVIPSPDP---GELAIVRREPLGVVGAITPWNFPL 110
Query: 64 HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ET 122
+ A+ +GN +V+K SE + ++ A G P +++V+TG E
Sbjct: 111 LLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLAEA----GLPPGVLNVVTGDGDEV 166
Query: 123 GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQI 180
G AL S VDKI F GS VG+ IMR A++ L VTLELGGK IV DD D+ +
Sbjct: 167 GAALASHPRVDKISFTGSTAVGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDAAVKG 226
Query: 181 AVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 240
AV A ++GQ C A R VH IY FV ++ + VK++ G PL DMG L
Sbjct: 227 AVFGAFGNAGQVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQ 286
Query: 241 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIM 300
+++ + DA +GA++L G +G + PPTV+ +V+ M + QEE FGP++
Sbjct: 287 LDRVLAYIEDAKAEGAKLLCGGKRLEGGKGY---FVPPTVLTDVDPDMPIAQEEIFGPVL 343
Query: 301 PIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSL 360
P++ F +EE ++LAND+ YGL VF+ RA +A +++ G IND++ S
Sbjct: 344 PVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVAERLEAGTVWINDYSVG-AEPSA 402
Query: 361 PFGGVKDSGFGRFAGVEGLRACCLVKSVVE 390
PFGGVK SG GR G GL K+V
Sbjct: 403 PFGGVKQSGIGREGGPYGLEEYTEPKTVTI 432
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432 |
| >gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp | Back alignment and domain information |
|---|
Score = 395 bits (1017), Expect = e-135
Identities = 150/388 (38%), Positives = 213/388 (54%), Gaps = 9/388 (2%)
Query: 3 DASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYP 62
+ E++ E I W + L P +G M +KKA VE+ P GVVG I WNYP
Sbjct: 73 ADAGLEVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYP 132
Query: 63 FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET 122
++ A+ +GN +V+K SE G + A AA G P+ ++ V+TG T
Sbjct: 133 LLTPMGDIIPALAAGNAVVLKPSEVTPLVGEL----LAEAWAAAGPPQGVLQVVTGDGAT 188
Query: 123 GEALVSS-VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIA 181
G AL+ + VDK+ F GS GR +M A++ L PV LELGGKD IV D D+ A A
Sbjct: 189 GAALIDAGVDKVAFTGSVATGRKVMAAAAERLIPVVLELGGKDPMIVLADADLERAAAAA 248
Query: 182 VRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241
V A+ ++GQ C ER YVH +Y FV+++ +++ G G D+G +
Sbjct: 249 VWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDIGDADIGPMTTARQL 308
Query: 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMP 301
+ ++ V+DA+ KGA+ L G S G ++ PTV+ +V H M +M+EE FGP++P
Sbjct: 309 DIVRRHVDDAVAKGAKALTGG---ARSNGG-GPFYEPTVLTDVPHDMDVMREETFGPVLP 364
Query: 302 IMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLP 361
+M ++E + LANDSRYGL +VFS RA IA +++ G +IND +LP
Sbjct: 365 VMPVADEDEAIALANDSRYGLSASVFSRDLARAEAIARRLEAGAVSINDVLLTAGIPALP 424
Query: 362 FGGVKDSGFGRFAGVEGLRACCLVKSVV 389
FGGVKDSG GR G EGLR C K++
Sbjct: 425 FGGVKDSGGGRRHGAEGLREFCRPKAIA 452
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453 |
| >gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 358 bits (921), Expect = e-120
Identities = 139/387 (35%), Positives = 208/387 (53%), Gaps = 16/387 (4%)
Query: 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFH 64
+ GE+ + + + K L+ E S A PLGVVGAI WN+P
Sbjct: 86 ARGEVPRAIDTLRYYAGLARK-LEGETLPSDPG---VLAYTRREPLGVVGAITPWNFPLL 141
Query: 65 NIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETG 123
+ A+ +GN +V+K SE + + + A G P +++V+TG +E G
Sbjct: 142 LAAWKIAPALAAGNTVVLKPSELTPLTALLLAELFEEA----GLPPGVLNVVTGSGSEVG 197
Query: 124 EALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIA 181
+ALV VDK+ F GS VGR I + A+K L VTLELGGK+ IV DD D+ + A
Sbjct: 198 DALVEHPDVDKVSFTGSTEVGRRIAKAAAKNLKRVTLELGGKNPLIVFDDADLDAAVEGA 257
Query: 182 VRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241
V A ++GQ C R VH IY FV ++ + KS+ G PL D+G L +
Sbjct: 258 VFGAFGNAGQVCTAGSRLLVHESIYDEFVERLVEAAKSLKVGDPLDPDTDIGPLISKKQR 317
Query: 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMP 301
E++ + + DA ++GA++L G G L +G + PTV+ +V M++ QEE FGP++
Sbjct: 318 ERVLSYIEDAKEEGAKLLCGGEAG-LEKGY---FVEPTVLADVTPDMRIAQEEIFGPVLS 373
Query: 302 IMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLP 361
++ F ++E ++LAND+ YGL VF+ RA +A +++ G+ IND+ + ++LP
Sbjct: 374 VIPFKDEDEAIELANDTEYGLAAGVFTNDLERALRVARRLEAGMVWINDYTTGDP-EALP 432
Query: 362 FGGVKDSGFGRFAGVEGLRACCLVKSV 388
FGG K SGFGR G EGL K+V
Sbjct: 433 FGGFKQSGFGREGGKEGLEEYTETKTV 459
|
This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459 |
| >gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 350 bits (901), Expect = e-117
Identities = 137/387 (35%), Positives = 197/387 (50%), Gaps = 17/387 (4%)
Query: 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFH 64
+ GEI + I + E + + S V PLGVVGAI WN+P
Sbjct: 93 ARGEIARAADFIRYYAEEARRLEGETIPTDKGSKAL----VRREPLGVVGAITPWNFPLA 148
Query: 65 NIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETG 123
+ A+ +GN +V+K SE S + A G P +++V+TG AE G
Sbjct: 149 LAAWKLAPALAAGNTVVLKPSEQTPLSALALAELAAEA----GLPAGVLNVVTGGGAEVG 204
Query: 124 EALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIA 181
+ALV+ VD I F GS VGR I A+ L PVTLELGGK IV +D D+ A
Sbjct: 205 DALVAHPDVDAISFTGSTAVGRAIAAAAAANLKPVTLELGGKSPAIVLEDADLDAAVDAA 264
Query: 182 VRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241
V A ++GQ C A R VH +Y FV ++ S+ G PL D+G L E
Sbjct: 265 VFGAFFNAGQRCTAASRLIVHESVYDEFVERLVARAASLKVGDPLDPSTDLGPLISEEQL 324
Query: 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMP 301
++++ + DA+ +GA +LA G + PT++ V M++ +EE FGP++P
Sbjct: 325 DRVEGYIEDAVAEGARLLAGGKRPG------GYFVEPTILEGVTPDMRIAREEIFGPVLP 378
Query: 302 IMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLP 361
+++F +EE ++LAND+ YGL A+F+ RA +A +++ G+ IND+ LP
Sbjct: 379 VIRFKDEEEAIELANDTEYGLAAAIFTRDLARAFRVARRLEAGMVGINDYTGGADIAYLP 438
Query: 362 FGGVKDSGFGRFAGVEGLRACCLVKSV 388
FGGVK SG GR G GL VK+V
Sbjct: 439 FGGVKQSGLGREGGKYGLEEFTEVKTV 465
|
Length = 472 |
| >gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Score = 295 bits (757), Expect = 1e-95
Identities = 134/354 (37%), Positives = 184/354 (51%), Gaps = 29/354 (8%)
Query: 49 PLGVVGAIVSWNYPFHNIFN------PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAA 102
PLGVV AI WN P + P LAA GN +V+K SE+ S ++ + A
Sbjct: 119 PLGVVAAITPWNSP---LLLLAKKLAPALAA---GNTVVLKPSEHTPASTLELAKLAEEA 172
Query: 103 LAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLE 159
G P +V+V+TGF ETGEALV V KI F G GR I R A++ L PVTLE
Sbjct: 173 ----GFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAENLAPVTLE 228
Query: 160 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 219
LGGK IV DD D+ V ++GQ C R V R IY FV ++ ++
Sbjct: 229 LGGKSPNIVFDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARA 288
Query: 220 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILA---RGSFGHLSEGAVDQYF 276
+ G PL + MG L EK++ V A ++GA +L R S L G +F
Sbjct: 289 IRVGDPLDPETQMGPLATERQLEKVERYVARAREEGARVLTGGERPSGADLGAG---YFF 345
Query: 277 PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRARE 336
PT++ +V + M++ QEE FGP++ ++ F+ +EE + LANDS YGL +++ RA
Sbjct: 346 EPTILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTRDLARAHR 405
Query: 337 IAAQIQCGVAAINDF-ASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389
+A I+ G +N + A + PFGG KDSG GR G+E +R KSV
Sbjct: 406 VARAIEAGTVWVNTYRALSPS---SPFGGFKDSGIGRENGIEAIREYTQTKSVW 456
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457 |
| >gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Score = 292 bits (751), Expect = 9e-95
Identities = 145/395 (36%), Positives = 201/395 (50%), Gaps = 32/395 (8%)
Query: 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGR----SMIHKKAKVEFHPLGVVGAIVSWN 60
+ GE+ + W E R GR K+ V P+GVV AI WN
Sbjct: 76 ARGEVDYAASFLEWFAEEAR-------RIYGRTIPSPAPGKRILVIKQPVGVVAAITPWN 128
Query: 61 YPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVIT 117
+P I P LAA G +V+K +E S + + A G P +++V+T
Sbjct: 129 FPAAMITRKIAPALAA---GCTVVLKPAEETPLSALALAELAEEA----GLPAGVLNVVT 181
Query: 118 GF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDV 174
G AE GEAL +S V KI F GS VG+++M A+ T+ V+LELGG FIV DD D+
Sbjct: 182 GSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAADTVKRVSLELGGNAPFIVFDDADL 241
Query: 175 PHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGA 234
A+ + +++GQ C A R YVH IY FV ++ + VK + G L DMG
Sbjct: 242 DKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMGP 301
Query: 235 LCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 294
L EK++ LV DA+ KGA++L G G ++ PTV+ +V M +M EE
Sbjct: 302 LINERAVEKVEALVEDAVAKGAKVLTGGK-RLGLGGY---FYEPTVLTDVTDDMLIMNEE 357
Query: 295 AFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFA-S 353
FGP+ PI+ F+T++EV+ AND+ YGL VF+ RA +A ++ G+ IN S
Sbjct: 358 TFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLARAWRVAEALEAGMVGINTGLIS 417
Query: 354 NYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 388
+ PFGGVK+SG GR G EGL K V
Sbjct: 418 D---AEAPFGGVKESGLGREGGKEGLEEYLETKYV 449
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451 |
| >gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Score = 291 bits (748), Expect = 2e-94
Identities = 125/361 (34%), Positives = 188/361 (52%), Gaps = 33/361 (9%)
Query: 40 HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLA------AVFSGNGIVIKVSENASWSGC 93
++ ++ PLGVV AIV WN+P +LA A+ +GN +V+K S
Sbjct: 105 TRRVELRRKPLGVVAAIVPWNFPL------LLAAWKIAPALLAGNTVVLKPSPFTPLCTL 158
Query: 94 FYFRIIQAALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASK 151
+ Q L P +++V++G E G AL S + KI F GS G+ +M +A+K
Sbjct: 159 KLGELAQEVL-----PPGVLNVVSGGDELGPALTSHPDIRKISFTGSTATGKKVMASAAK 213
Query: 152 TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVS 211
TL VTLELGG DA IV DVD+ VA A +SGQ CA +R YVH IY F
Sbjct: 214 TLKRVTLELGGNDAAIVLPDVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCE 273
Query: 212 QVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF----GHL 267
+ + K+ G L +G + +K++ LV DA KGA++LA G G+
Sbjct: 274 ALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKELVEDAKAKGAKVLAGGEPLDGPGY- 332
Query: 268 SEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVF 327
+ PPT++ + +++ EE FGP++P++K++ ++EV+ ANDS YGLG +V+
Sbjct: 333 -------FIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVW 385
Query: 328 SGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKS 387
S RA +A +++ G IN + + PFGG K SG G G+EGL+ +
Sbjct: 386 SSDLERAEAVARRLEAGTVWINTHGA--LDPDAPFGGHKQSGIGVEFGIEGLKEYTQTQV 443
Query: 388 V 388
+
Sbjct: 444 I 444
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446 |
| >gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Score = 279 bits (716), Expect = 1e-89
Identities = 130/388 (33%), Positives = 188/388 (48%), Gaps = 20/388 (5%)
Query: 7 GEIMTTCEKITWLLSEGEKWLKPE--YRSSG--RSMIHKKAKVEFHPLGVVGAIVSWNYP 62
GEI E+ +++S E+ L G R + + PLGVV I WNYP
Sbjct: 77 GEIRGMLERARYMISIAEEALADIRVPEKDGFERYIRRE-------PLGVVLIIAPWNYP 129
Query: 63 FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET 122
+ N ++ A+ +GN +++K S G AA A G PE + V+ ET
Sbjct: 130 YLTAVNAVIPALLAGNAVILKHSPQTPLCGER----FAAAFAEAGLPEGVFQVLHLSHET 185
Query: 123 GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQI 180
AL++ +D + F GS GR I R A+ V LELGGKD V D D+ A+
Sbjct: 186 SAALIADPRIDHVSFTGSVAGGRAIQRAAAGRFIKVGLELGGKDPAYVRPDADLDAAAES 245
Query: 181 AVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 240
V A +SGQ+C ER YVH IY FV +VK G PL +G +
Sbjct: 246 LVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARA 305
Query: 241 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIM 300
++ ++ + DA+ KGA L G+ + Y PTV+ NV+H+M++M+EE FGP++
Sbjct: 306 ADFVRAQIADAIAKGARALIDGALFPEDKAGG-AYLAPTVLTNVDHSMRVMREETFGPVV 364
Query: 301 PIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSL 360
IMK +D E + L NDS YGL +V++ RA + Q++ G +N +Y+ +L
Sbjct: 365 GIMKVKSDAEAIALMNDSEYGLTASVWTKDIARAEALGEQLETGTVFMN--RCDYLDPAL 422
Query: 361 PFGGVKDSGFGRFAGVEGLRACCLVKSV 388
+ GVKDSG G G KS
Sbjct: 423 AWTGVKDSGRGVTLSRLGYDQLTRPKSY 450
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452 |
| >gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Score = 276 bits (708), Expect = 1e-88
Identities = 130/405 (32%), Positives = 196/405 (48%), Gaps = 46/405 (11%)
Query: 2 VDASLGEIMTTCEKITWLLS----EGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIV 57
+ + E+ EK W+ E +L E + KA V + PLGVV I+
Sbjct: 53 IAEARAEV----EKCAWICRYYAENAEAFLADEPIETD----AGKAYVRYEPLGVVLGIM 104
Query: 58 SWNYPFHNIFN---PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 114
WN+PF +F P L A GN +++K + N I+ G PE +
Sbjct: 105 PWNFPFWQVFRFAAPNLMA---GNTVLLKHASNVPGCA----LAIEELFREAGFPEGVFQ 157
Query: 115 VITGFAETGEALVSSVDKII---------FVGSPGVGRMIMRNASKTLTPVTLELGGKDA 165
+ ++ + V+ II GS GR + A K L LELGG D
Sbjct: 158 NL--LIDSDQ-----VEAIIADPRVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDP 210
Query: 166 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 225
FIV DD D+ + AV+ LQ++GQ+C A+RF VH D+Y F+ + + + ++ G P
Sbjct: 211 FIVLDDADLDKAVKTAVKGRLQNAGQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDP 270
Query: 226 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVN 285
+ D+G L + ++L V +A+ GA +L G GA ++PPTV+ +V
Sbjct: 271 MDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKR-PDGPGA---FYPPTVLTDVT 326
Query: 286 HTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGV 345
M EE FGP+ ++K +EE + LANDS +GLG +VF+ RA +A +++ G+
Sbjct: 327 PGMPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVARRLEAGM 386
Query: 346 AAINDF-ASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389
IN S+ LPFGGVK SG+GR G G+R +K+V
Sbjct: 387 VFINGMVKSD---PRLPFGGVKRSGYGRELGRFGIREFVNIKTVW 428
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429 |
| >gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Score = 272 bits (699), Expect = 6e-87
Identities = 123/349 (35%), Positives = 176/349 (50%), Gaps = 11/349 (3%)
Query: 44 KVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 103
V P+GVV AI WN+PF + A+ +GN +V+K + + S II
Sbjct: 118 VVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLSALLLGEII---- 173
Query: 104 AAVGAPENLVDVITG-FAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 160
A P +V+V+TG GEAL + VD + F GS VGR IM A+ TL V LEL
Sbjct: 174 AETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAATLKRVLLEL 233
Query: 161 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 220
GGK A IV DD D+ A AV + ++GQ CA R V R Y V +A +++
Sbjct: 234 GGKSANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEAL 293
Query: 221 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTV 280
G P MG L ++++ + D+GA ++ G G + Y PT+
Sbjct: 294 PVGDPADPGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGG--GRPAGLDKGFYVEPTL 351
Query: 281 IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQ 340
+V++ M++ QEE FGP++ ++ ++ D+E V++ANDS YGL V+S RA +A +
Sbjct: 352 FADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGVWSADVDRAYRVARR 411
Query: 341 IQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389
I+ G IN PFGG K SG GR G+EGL KS+
Sbjct: 412 IRTGSVGINGGG--GYGPDAPFGGYKQSGLGRENGIEGLEEFLETKSIA 458
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459 |
| >gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Score = 270 bits (693), Expect = 3e-86
Identities = 126/359 (35%), Positives = 192/359 (53%), Gaps = 12/359 (3%)
Query: 24 EKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIK 83
E+ LKP R ++ + V P GVVG I WNYP + + A+ +GN +V+K
Sbjct: 94 ERLLKPRRRRGAIPVL-TRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLK 152
Query: 84 VSENASWSGCFYFRIIQAALAAVGAPENLVDVITG-FAETGEALVSSVDKIIFVGSPGVG 142
+ + + ++ A G P +L V+TG +E G A+V + D ++F GS G
Sbjct: 153 PDSQTALTALWAVELLIEA----GLPRDLWQVVTGPGSEVGGAIVDNADYVMFTGSTATG 208
Query: 143 RMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVH 202
R++ A + L +LELGGK+ IV +D D+ A AVRA ++GQ C ER YVH
Sbjct: 209 RVVAERAGRRLIGCSLELGGKNPMIVLEDADLDKAAAGAVRACFSNAGQLCVSIERIYVH 268
Query: 203 RDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG 262
+Y FV + +++ G L DMG+L +++ V+DA+ KGA +LA G
Sbjct: 269 ESVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHVDDAVAKGATVLAGG 328
Query: 263 SFGHLSEGAVDQYF-PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 321
+ + YF PTV+ V M+L EE FGP++ I + D+E ++LAND+ YG
Sbjct: 329 R----ARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYG 384
Query: 322 LGCAVFSGSQHRAREIAAQIQCGVAAIND-FASNYMCQSLPFGGVKDSGFGRFAGVEGL 379
L +V++ R R IAA+++ G +N+ +A+ + P GG+KDSG GR G EGL
Sbjct: 385 LNASVWTRDGARGRRIAARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLGRRHGAEGL 443
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454 |
| >gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 266 bits (683), Expect = 6e-85
Identities = 122/335 (36%), Positives = 168/335 (50%), Gaps = 22/335 (6%)
Query: 48 HPLGVVGAIVSWNYPFH---NIFNPMLAAVFSGNGIVIKVSENASWSGCFYF-RIIQAAL 103
PLGVVG I +N+P P LA GN +V+K +G I + A
Sbjct: 97 VPLGVVGVISPFNFPLILAMRSVAPALAL---GNAVVLKPDSRTPVTGGLLIAEIFEEA- 152
Query: 104 AAVGAPENLVDVITG-FAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 160
G P+ +++V+ G +E G+ALV V I F GS VGR I A + L V LEL
Sbjct: 153 ---GLPKGVLNVVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGRHLKKVALEL 209
Query: 161 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 220
GG + IV DD D+ A A GQ C A R VH +Y FV ++ K++
Sbjct: 210 GGNNPLIVLDDADLDLAVSAAAFGAFLHQGQICMAAGRILVHESVYDEFVEKLVAKAKAL 269
Query: 221 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTV 280
G P +G L +++ +V DA+ GA +L G++ EG + PTV
Sbjct: 270 PVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGTY----EGLF---YQPTV 322
Query: 281 IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQ 340
+ +V M + +EE FGP+ P++ F+ DEE V+LAND+ YGL AVF+ RA A +
Sbjct: 323 LSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFAER 382
Query: 341 IQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG 375
++ G+ IND N PFGGVK SG GRF G
Sbjct: 383 LETGMVHINDQTVNDEPHV-PFGGVKASGGGRFGG 416
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431 |
| >gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 265 bits (679), Expect = 3e-83
Identities = 134/385 (34%), Positives = 190/385 (49%), Gaps = 30/385 (7%)
Query: 23 GEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVI 82
K L P R+ ++ K P GVVG I WNYP + + A+ +GN +V+
Sbjct: 129 APKLLAPRRRAGALPVL-TKTTELRQPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVL 187
Query: 83 KVSENASWSGCFYFRIIQAALAAV------GAPENLVDVITG-FAETGEALVSSVDKIIF 135
K + ALAAV G P +L V+TG G ALV + D ++F
Sbjct: 188 KPDSQTPLT----------ALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDNADYLMF 237
Query: 136 VGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAG 195
GS GR++ A + L +LELGGK+ IV DD D+ A AVRA ++GQ C
Sbjct: 238 TGSTATGRVLAEQAGRRLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCIS 297
Query: 196 AERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKG 255
ER YVH IY FV V+++ G DMG+L E + V+DA+ KG
Sbjct: 298 IERIYVHESIYDEFVRAFVAAVRAMRLGAGYDYSADMGSLISEAQLETVSAHVDDAVAKG 357
Query: 256 AEIL----ARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEV 311
A +L AR G L ++ PTV+ V M+L +EE FGP++ + +E
Sbjct: 358 ATVLAGGKARPDLGPL-------FYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEA 410
Query: 312 VKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIND-FASNYMCQSLPFGGVKDSGF 370
V+ AND+ YGL +V++G R R IAA+I+ G +N+ +A+ + P GG+KDSG
Sbjct: 411 VERANDTPYGLNASVWTGDTARGRAIAARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGL 470
Query: 371 GRFAGVEGLRACCLVKSVVEDRWWP 395
GR G EGL +++ R P
Sbjct: 471 GRRHGAEGLLKYTESQTIATQRVLP 495
|
Length = 524 |
| >gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Score = 263 bits (675), Expect = 3e-83
Identities = 126/349 (36%), Positives = 178/349 (51%), Gaps = 22/349 (6%)
Query: 49 PLGVVGAIVSWNYP---FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 105
P+GV G I+ WN+P P LAA GN +V+K +E S + +I+ A
Sbjct: 141 PIGVCGQIIPWNFPLLMLAWKLAPALAA---GNTVVLKPAEQTPLSALYLAELIKEA--- 194
Query: 106 VGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELG 161
G P +V+++ GF T G A+ S VDKI F GS VGR IM A+K+ L VTLELG
Sbjct: 195 -GFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAAAKSNLKKVTLELG 253
Query: 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 221
GK IV DD D+ + A + GQ C R +V IY FV + +
Sbjct: 254 GKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVEKFKARAEKRV 313
Query: 222 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF-PPTV 280
G P G +K+ + + +GA +L G H S+G YF PTV
Sbjct: 314 VGDPFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGE-RHGSKG----YFIQPTV 368
Query: 281 IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQ 340
+V MK+ +EE FGP++ I+KF T++EV++ AND+ YGL VF+ ++A ++
Sbjct: 369 FTDVKDDMKIAKEEIFGPVVTILKFKTEDEVIERANDTEYGLAAGVFTKDINKALRVSRA 428
Query: 341 IQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389
++ G +N + N ++PFGG K SGFGR G EGL VK+V
Sbjct: 429 LKAGTVWVNTY--NVFDAAVPFGGFKQSGFGRELGEEGLEEYTQVKAVT 475
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476 |
| >gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Score = 262 bits (673), Expect = 4e-83
Identities = 125/358 (34%), Positives = 180/358 (50%), Gaps = 31/358 (8%)
Query: 45 VEFHPLGVVGAIVSWNYPFHNIFNPMLA------AVFSGNGIVIKVSENASWSGCFYFRI 98
V P+GV G I WN P ML A+ GN +V+K SE + +
Sbjct: 113 VLRQPVGVAGLITPWNLPL------MLLTWKIAPALAFGNTVVLKPSEWTPLTAWLLAEL 166
Query: 99 IQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTP 155
A G P +V+V+ GF E G ALV+ VD I F G GR IMR A+ L P
Sbjct: 167 ANEA----GLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAPNLKP 222
Query: 156 VTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAK 215
V+LELGGK+ IV D D+ AVR++ ++G+ C R V R IY F+ + +
Sbjct: 223 VSLELGGKNPNIVFADADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVE 282
Query: 216 IVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS---FGHLSEGAV 272
K++ G PL ++G L EH EK+ V A +GA IL G L G
Sbjct: 283 RAKALKVGDPLDPDTEVGPLISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGY- 341
Query: 273 DQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQH 332
+ PTVI +++ ++ QEE FGP++ ++ F+ +EE ++LAND+ YGL V++
Sbjct: 342 --FVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLG 399
Query: 333 RAREIAAQIQCGVAAINDFASNYMCQSL--PFGGVKDSGFGRFAGVEGLRACCLVKSV 388
RA +A +++ G +N + + + L PFGGVK SG GR G L +K+V
Sbjct: 400 RAHRVARRLEAGTVWVNCW----LVRDLRTPFGGVKASGIGREGGDYSLEFYTELKNV 453
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455 |
| >gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Score = 257 bits (658), Expect = 9e-81
Identities = 117/348 (33%), Positives = 173/348 (49%), Gaps = 19/348 (5%)
Query: 49 PLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 105
PLGVVGA+V WN+P P LAA GN +V+K +E + + R+ + AL A
Sbjct: 124 PLGVVGAVVPWNFPLLMAAWKIAPALAA---GNSVVLKPAEQSPLTA---LRLAELALEA 177
Query: 106 VGAPENLVDVITGFAET-GEALV--SSVDKIIFVGSPGVGRMIMRNASKT-LTPVTLELG 161
G P +++V+ GF T GEAL VD + F GS VGR + + ++ L V LE G
Sbjct: 178 -GLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECG 236
Query: 162 GKDAFIVCDDV-DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 220
GK IV D D+ A+ A + G+ C+ R VH I F+ +V +
Sbjct: 237 GKSPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREW 296
Query: 221 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTV 280
G PL MGAL H +K+ + +GA ++A G G + PTV
Sbjct: 297 KPGDPLDPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETG--GFFVEPTV 354
Query: 281 IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQ 340
V M++ +EE FGP++ ++ F+++EE V LANDS YGL +V++ RA +A +
Sbjct: 355 FDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAASVWTSDLSRAHRVARR 414
Query: 341 IQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 388
++ G +N F + + PFGG K SG GR + L +K+
Sbjct: 415 LRAGTVWVNCFDEGDI--TTPFGGFKQSGNGRDKSLHALDKYTELKTT 460
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462 |
| >gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 253 bits (649), Expect = 7e-80
Identities = 130/388 (33%), Positives = 189/388 (48%), Gaps = 14/388 (3%)
Query: 6 LGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN 65
L EI+ + I +KW+KP R G + KA+VE+ PLGVVG IV WNYP +
Sbjct: 58 LAEILPSIAGIKHARKHLKKWMKPSRRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYL 117
Query: 66 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEA 125
P++AA+ +GN ++IK SE + ++ E+ V V+TG A+ A
Sbjct: 118 ALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAEYF-----DEDEVAVVTGGADVAAA 172
Query: 126 LVSSV--DKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVR 183
SS+ D ++F GS VGR +MR A++ LTPVTLELGGK I+ D D+ A+
Sbjct: 173 -FSSLPFDHLLFTGSTAVGRHVMRAAAENLTPVTLELGGKSPAIIAPDADLAKAAERIAF 231
Query: 184 AALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEK 243
L ++GQ C + V D FV+ V + P LA D ++ H +
Sbjct: 232 GKLLNAGQTCVAPDYVLVPEDKLEEFVAAAKAAVAKMY--PTLADNPDYTSIINERHYAR 289
Query: 244 LQNLVNDALDKGAEILARGSFGHLSEGAVD-QYFPPTVIVNVNHTMKLMQEEAFGPIMPI 302
LQ L+ DA KGA ++ E + PPT+++NV M++MQEE FGPI+PI
Sbjct: 290 LQGLLEDARAKGARVI---ELNPAGEDFAATRKLPPTLVLNVTDDMRVMQEEIFGPILPI 346
Query: 303 MKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPF 362
+ +++ +E + N L F + + + G IND + LPF
Sbjct: 347 LTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRTHSGGVTINDTLLHVAQDDLPF 406
Query: 363 GGVKDSGFGRFAGVEGLRACCLVKSVVE 390
GGV SG G + G EG K V +
Sbjct: 407 GGVGASGMGAYHGKEGFLTFSHAKPVFK 434
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434 |
| >gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Score = 253 bits (649), Expect = 1e-79
Identities = 122/347 (35%), Positives = 186/347 (53%), Gaps = 16/347 (4%)
Query: 49 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 108
P GV G I+ WNYP + A+ +GN +V+K +E+A + R+ + A A G
Sbjct: 117 PHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTAL---RLAELAEEA-GL 172
Query: 109 PENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 165
P ++V+TG AE G ALV+ VD I F GS G +MR A++ + PVTLELGGK
Sbjct: 173 PAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAENVVPVTLELGGKSP 232
Query: 166 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 225
IV D D+ + V A +Q++GQ C+ R VHR IY + ++ + +++ GP
Sbjct: 233 QIVFADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPG 292
Query: 226 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF--GHLSEGAVDQYFPPTVIVN 283
L D+G L + ++++ V A +GA I+A G G + G + PT++ +
Sbjct: 293 LEDP-DLGPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGY---FVAPTLLDD 348
Query: 284 VNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQC 343
V +L QEE FGP++ +M F+ + E + LAN + YGL V++ RA +A +++
Sbjct: 349 VPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGDRALRVARRLRA 408
Query: 344 GVAAIND-FASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389
G +N+ A + LPFGGVK SG GR G+E L K+V
Sbjct: 409 GQVFVNNYGAGGGI--ELPFGGVKKSGHGREKGLEALYNYTQTKTVA 453
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454 |
| >gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Score = 252 bits (647), Expect = 3e-79
Identities = 124/346 (35%), Positives = 174/346 (50%), Gaps = 15/346 (4%)
Query: 49 PLGVVGAIVSWNYPFHNIF---NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 105
PLGV I +WNYP P LA GN +V K S + I+ A
Sbjct: 116 PLGVCAGIGAWNYPIQIASWKSAPALAC---GNAMVYKPSPFTPLTALLLAEILTEA--- 169
Query: 106 VGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK 163
G P+ + +V+ G ETG+ L V K+ F GS G+ +M A+K + VTLELGGK
Sbjct: 170 -GLPDGVFNVVQGGGETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKGIKHVTLELGGK 228
Query: 164 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 223
I+ DD D+ + A+ A S GQ C+ R +V R I F ++ + K + G
Sbjct: 229 SPLIIFDDADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIG 288
Query: 224 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVD-QYFPPTVIV 282
PL MGAL EH EK+ + A +GA++L G +G + Y P V+
Sbjct: 289 DPLDEDTQMGALISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLT 348
Query: 283 NVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ 342
+ M +++EE FGP+M I+ F+T+EEV++ AND+ YGL VF+ RA + AQ+Q
Sbjct: 349 DCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQRAHRVIAQLQ 408
Query: 343 CGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 388
G IN + N +PFGG K SGFGR G L +K+V
Sbjct: 409 AGTCWINTY--NISPVEVPFGGYKQSGFGRENGTAALEHYTQLKTV 452
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457 |
| >gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Score = 249 bits (638), Expect = 1e-77
Identities = 116/361 (32%), Positives = 175/361 (48%), Gaps = 23/361 (6%)
Query: 35 GRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 94
G S++ ++ P+GV G I WN+P + I + A+ +G +V+K SE A S
Sbjct: 122 GNSLVVRE------PIGVCGLITPWNWPLNQIVLKVAPALAAGCTVVLKPSEVAPLSA-- 173
Query: 95 YFRIIQAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASK 151
I+ L G P + +++ G GEAL + VD + F GS G+ + A+
Sbjct: 174 --IILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAAD 231
Query: 152 TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVS 211
T+ V LELGGK A I+ DD D+ V A +SGQ+C R V R YA
Sbjct: 232 TVKRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEE 291
Query: 212 QVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGH---LS 268
A ++ G P +G L +++Q + +++GA ++A G G L
Sbjct: 292 IAAAAAEAYVVGDPRDPATTLGPLASAAQFDRVQGYIQKGIEEGARLVAGGP-GRPEGLE 350
Query: 269 EGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFS 328
G + PTV +V M + +EE FGP++ I+ ++ ++E + +AND+ YGL V+S
Sbjct: 351 RGY---FVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAIANDTPYGLAGYVWS 407
Query: 329 GSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 388
RAR +A +++ G IN A N PFGG K SG GR G GL VKS+
Sbjct: 408 ADPERARAVARRLRAGQVHINGAAFNP---GAPFGGYKQSGNGREWGRYGLEEFLEVKSI 464
Query: 389 V 389
Sbjct: 465 Q 465
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466 |
| >gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 247 bits (633), Expect = 2e-77
Identities = 128/343 (37%), Positives = 179/343 (52%), Gaps = 13/343 (3%)
Query: 49 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 108
P+GVVGAIV WN+P + A+ +GN +V+K +E S RI + A G
Sbjct: 117 PVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSA---LRIAELM-AEAGF 172
Query: 109 PENLVDVITGFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 165
P +++V+TGF E G ALV VDKI F GS VGR IM+ A+ L V+LELGGK A
Sbjct: 173 PAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAGNLKRVSLELGGKSA 232
Query: 166 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 225
IV D D+ + A + GQ C R VH IY F+ + + +S+ G P
Sbjct: 233 NIVFADADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDP 292
Query: 226 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVN 285
L K MG L +++ + V+ ++GA +L G GA + PT+ V
Sbjct: 293 LDPKTQMGPLVSQAQFDRVLDYVDVGREEGARLLTGGK----RPGARGFFVEPTIFAAVP 348
Query: 286 HTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGV 345
M++ QEE FGP++ +M+F +EE +++AN + YGL V++ RA +AA ++ G
Sbjct: 349 PEMRIAQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRVAAALKAGT 408
Query: 346 AAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 388
IN + N PFGG K SGFGR G E L VKSV
Sbjct: 409 VWINTY--NRFDPGSPFGGYKQSGFGREMGREALDEYTEVKSV 449
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453 |
| >gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 247 bits (633), Expect = 5e-77
Identities = 117/373 (31%), Positives = 177/373 (47%), Gaps = 22/373 (5%)
Query: 23 GEKWLKPEYRSS---GRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNG 79
+ E R G ++ ++ P+GVV AIV WN P + A+ +G
Sbjct: 114 ARDFPFEERRPGSGGGHVLVRRE------PVGVVAAIVPWNAPLFLAALKIAPALAAGCT 167
Query: 80 IVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVG 137
+V+K S ++ A G P +V+V+ E GE LV VDK+ F G
Sbjct: 168 VVLKPSPETPLDAY----LLAEAAEEAGLPPGVVNVVPADREVGEYLVRHPGVDKVSFTG 223
Query: 138 SPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAE 197
S GR I + L VTLELGGK A IV DD D+ V A+L ++GQ C
Sbjct: 224 STAAGRRIAAVCGERLARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALT 283
Query: 198 RFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAE 257
R V R Y V +A V ++ G PL +G L E+++ + +GA
Sbjct: 284 RILVPRSRYDEVVEALAAAVAALKVGDPLDPATQIGPLASARQRERVEGYIAKGRAEGAR 343
Query: 258 ILARGSF-GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAN 316
++ G L G + PT+ +V++ M++ QEE FGP++ ++ ++ +++ V++AN
Sbjct: 344 LVTGGGRPAGLDRG---WFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRIAN 400
Query: 317 DSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGV 376
DS YGL +V++ R +A +I+ G +N F + PFGG K SG GR G
Sbjct: 401 DSDYGLSGSVWTADVERGLAVARRIRTGTVGVNGF---RLDFGAPFGGFKQSGIGREGGP 457
Query: 377 EGLRACCLVKSVV 389
EGL A KS+
Sbjct: 458 EGLDAYLETKSIY 470
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471 |
| >gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Score = 245 bits (628), Expect = 2e-76
Identities = 116/349 (33%), Positives = 172/349 (49%), Gaps = 21/349 (6%)
Query: 48 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 107
PLGVV I +NYP + A+ +GN +V+K SE G I++ A G
Sbjct: 118 RPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVIGLKIAEIMEEA----G 173
Query: 108 APENLVDVITG-FAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD 164
P+ + +V+TG AE G+ LV V + F GS VGR I A + L +TLELGGK+
Sbjct: 174 LPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGRHLKKITLELGGKN 233
Query: 165 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 224
IV D D+ + + A A GQ C A R V +Y FV + + G
Sbjct: 234 PLIVLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGD 293
Query: 225 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNV 284
P +G L E+++ V DA+ KGA++L G +G ++ PTV+ +V
Sbjct: 294 PRDPDTVIGPLISPRQVERIKRQVEDAVAKGAKLLTGGK----YDGN---FYQPTVLTDV 346
Query: 285 NHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCG 344
M++ +EE FGP+ ++ EE ++LAND+ YGL A+ + RA ++A +++ G
Sbjct: 347 TPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQRAFKLAERLESG 406
Query: 345 VAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRW 393
+ IND + +PFGGVK SGFGR G + E +W
Sbjct: 407 MVHIND-PTILDEAHVPFGGVKASGFGREGGEWSME------EFTELKW 448
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451 |
| >gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Score = 243 bits (623), Expect = 6e-76
Identities = 130/357 (36%), Positives = 183/357 (51%), Gaps = 39/357 (10%)
Query: 48 HPLGVVGAIVSWNYPFH----NIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 103
P+GVV I WN P I P LAA GN +V+K SE + + I +
Sbjct: 97 EPVGVVLGIAPWNAPVILGTRAIAYP-LAA---GNTVVLKASELSP--RTHWL-IGRVFH 149
Query: 104 AAVGAPENLVDVITGFAETG----EALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVT 157
A G P+ +++V+T E EAL++ V K+ F GS VGR+I A+K L PV
Sbjct: 150 EA-GLPKGVLNVVTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAKHLKPVL 208
Query: 158 LELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 217
LELGGK IV +D D+ A A+ A +SGQ C ER VH I FV ++
Sbjct: 209 LELGGKAPAIVLEDADLDAAANAALFGAFLNSGQICMSTERIIVHESIADEFVEKLKAAA 268
Query: 218 KSVSAGPPLAGK-YDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 276
+ + AGP + G A +++++ LV+DAL KGA+++ G G E
Sbjct: 269 EKLFAGPVVLGSLVSAAA------ADRVKELVDDALSKGAKLVV-G--GLADESPSGTSM 319
Query: 277 PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRARE 336
PPT++ NV M + EE+FGP++ I++ +EE V++ANDS YGL AVF+ RA
Sbjct: 320 PPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALA 379
Query: 337 IAAQIQCGVAAIN-----DFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 388
+A +I+ G IN D +LP GGVK SG+GRF G G+ K +
Sbjct: 380 VAKRIESGAVHINGMTVHDEP------TLPHGGVKSSGYGRFNGKWGIDEFTETKWI 430
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432 |
| >gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 241 bits (618), Expect = 5e-75
Identities = 128/340 (37%), Positives = 190/340 (55%), Gaps = 26/340 (7%)
Query: 48 HPLGVVGAIVSWNYPF----HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 103
P+GVVGAI +N+P H I P +A GN +V+K S N + +I++ A
Sbjct: 122 EPIGVVGAITPFNFPANLFAHKI-APAIAV---GNSVVVKPSSNTPLTAIELAKILEEA- 176
Query: 104 AAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 160
G P +++V+TG+ G+ +V++ V+ I F GS VG +I A T V LEL
Sbjct: 177 ---GLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGTGKKVALEL 233
Query: 161 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 220
GG D IV D D+ IAVR +++GQ C +R V ++Y F+ + + VK +
Sbjct: 234 GGSDPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKL 293
Query: 221 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTV 280
G PL D+G L E E+++NLVNDA++KG +IL G + +FPPTV
Sbjct: 294 KVGDPLDESTDLGPLISPEAVERMENLVNDAVEKGGKILYGG------KRDEGSFFPPTV 347
Query: 281 IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQ 340
+ N M +M+EE FGP++PI K DEE V++AN + YGL +VF+ +RA ++A +
Sbjct: 348 LENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTNDINRALKVARE 407
Query: 341 IQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLR 380
++ G IND ++ + +LPFGG K SG GR EG+R
Sbjct: 408 LEAGGVVIND-STRFRWDNLPFGGFKKSGIGR----EGVR 442
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456 |
| >gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Score = 241 bits (616), Expect = 2e-74
Identities = 123/347 (35%), Positives = 176/347 (50%), Gaps = 17/347 (4%)
Query: 49 PLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 105
P GV G I+ WNYP P LAA GN +VIK +EN S ++ +++ A
Sbjct: 144 PYGVCGQIIPWNYPLAMAAWKLAPALAA---GNTVVIKPAENTPLSLLYFANLVKEA--- 197
Query: 106 VGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162
G P +V++I G+ A G AL VDKI F GS GR++M+ A++ L VTLE GG
Sbjct: 198 -GFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAAAQNLKAVTLECGG 256
Query: 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 222
K +V +D D+ + A + +SGQNC R YV IY FV + + VK
Sbjct: 257 KSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYK 316
Query: 223 -GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 281
G P +G +++ + + +GA+ L G + PPT+
Sbjct: 317 VGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAK-LVYGGEKAPEGLGKGYFIPPTIF 375
Query: 282 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 341
+V M++++EE FGP++ I KF T EE +K AND+ YGL AVF+ RA +A ++
Sbjct: 376 TDVPQDMRIVKEEIFGPVVVISKFKTYEEAIKKANDTTYGLAAAVFTKDIRRAHRVAREL 435
Query: 342 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 388
+ G+ IN +SN +PFGG K SG GR G GL K+V
Sbjct: 436 EAGMVWIN--SSNDSDVGVPFGGFKMSGIGRELGEYGLETYTQTKAV 480
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484 |
| >gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Score = 237 bits (608), Expect = 8e-74
Identities = 125/378 (33%), Positives = 196/378 (51%), Gaps = 12/378 (3%)
Query: 6 LGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN 65
L EI+ +I + +KW+KP+ + + K+K+ + P GV I WNYPF+
Sbjct: 57 LTEILPVLSEINHAIKHLKKWMKPKRVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNL 116
Query: 66 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEA 125
F P+++A+ +GN ++K SE + +II+ A E+ V V G AE +A
Sbjct: 117 AFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREAF-----DEDEVAVFEGDAEVAQA 171
Query: 126 LVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRA 184
L+ D I F GSP VG+++M A+K L VTLELGGK IV + D+ A+
Sbjct: 172 LLELPFDHIFFTGSPAVGKIVMAAAAKHLASVTLELGGKSPTIVDETADLKKAAKKIAWG 231
Query: 185 ALQSSGQNCAGAERFYVHRDIYALFVSQV-AKIVKSVSAGPPLAGKYDMGALCLLEHSEK 243
++GQ C + +VH + FV + A+I K D+ + H ++
Sbjct: 232 KFLNAGQTCIAPDYVFVHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDR 291
Query: 244 LQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIM 303
L+ L++DA+ KGA++ G F A +Y PTV+ NV MK+MQEE FGP++PI+
Sbjct: 292 LKGLLDDAVAKGAKVEFGGQFD-----AAQRYIAPTVLTNVTPDMKIMQEEIFGPVLPII 346
Query: 304 KFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFG 363
+ +EV++ N L VFS + ++ A+ G +ND +++ +LPFG
Sbjct: 347 TYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVVNDVVLHFLNPNLPFG 406
Query: 364 GVKDSGFGRFAGVEGLRA 381
GV +SG G + GV G +A
Sbjct: 407 GVNNSGIGSYHGVYGFKA 424
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433 |
| >gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 239 bits (611), Expect = 9e-74
Identities = 111/319 (34%), Positives = 175/319 (54%), Gaps = 24/319 (7%)
Query: 38 MIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFR 97
I K P+GVV I+ WN+PF I + A+ +GN IVIK SE + +
Sbjct: 128 FIFKV------PIGVVAGILPWNFPFFLIARKLAPALVTGNTIVIKPSEETPLNALEFAE 181
Query: 98 IIQAALAAVGAPENLVDVITG-FAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLT 154
++ A G P +++++TG + G+ALV+ V I GS G+ IM A++ +T
Sbjct: 182 LVDEA----GLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAENIT 237
Query: 155 PVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQS----SGQNCAGAERFYVHRDIYALFV 210
V+LELGGK IV D D+ +AV+A + S GQ C AER YVH DIY F+
Sbjct: 238 KVSLELGGKAPAIVMKDADL----DLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFM 293
Query: 211 SQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEG 270
++ + +K+V G P DMG L +K++ +V A++ GA +L G +G
Sbjct: 294 EKLVEKMKAVKVGDPFDAATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKG 353
Query: 271 AVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGS 330
++ PTV+ NV M+++QEE FGP++P++KF++ +E ++LANDS YGL +++ +
Sbjct: 354 ---YFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELANDSEYGLTSYIYTEN 410
Query: 331 QHRAREIAAQIQCGVAAIN 349
+ A +++ G IN
Sbjct: 411 LNTAMRATNELEFGETYIN 429
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468 |
| >gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 239 bits (611), Expect = 1e-73
Identities = 125/375 (33%), Positives = 186/375 (49%), Gaps = 29/375 (7%)
Query: 40 HKKAKVEFHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYF 96
H ++ P+GV G I WNYP P LAA GN +VIK SE + F
Sbjct: 125 HVISRTVREPVGVCGLITPWNYPLLQAAWKLAPALAA---GNTVVIKPSEVTPLTTIALF 181
Query: 97 RIIQAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKTL 153
+I G P +V+++TG T G L S VD + F G GR IMR A+ +
Sbjct: 182 ELI----EEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAGNV 237
Query: 154 TPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQV 213
V LELGGK+ IV D D A+ ++GQ C+ R V I+ FV+ +
Sbjct: 238 KKVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAAL 297
Query: 214 AKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILA---RGSFGHLSEG 270
A+ K + G L +MG L EH EK+ + + ++GA ++ R + L++G
Sbjct: 298 AERAKKIKLGNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKG 357
Query: 271 AVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGS 330
+ PT+ +V+ TM+++QEE FGP++ + +F+T+EE ++LAND+ YGL AV++
Sbjct: 358 Y---FVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLANDTPYGLAGAVWTKD 414
Query: 331 QHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 390
RA +A +++ G IND+ + P+GG K SG GR G GL K +
Sbjct: 415 IARANRVARRLRAGTVWINDY--HPYFAEAPWGGYKQSGIGRELGPTGLEEYQETKHI-- 470
Query: 391 DRWWPYIKTKIPKPI 405
I P+PI
Sbjct: 471 -----NINLS-PQPI 479
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482 |
| >gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 237 bits (606), Expect = 3e-73
Identities = 120/339 (35%), Positives = 179/339 (52%), Gaps = 29/339 (8%)
Query: 49 PLGVVGAIVSWNYPF----HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALA 104
P+GVV AI +N+P H + P +AA GN +V+K + S ++ A
Sbjct: 123 PIGVVAAITPFNFPLNLVAHKV-GPAIAA---GNAVVLKPASQTPLSALKLAELLLEA-- 176
Query: 105 AVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161
G P+ ++V+TG ET G+ALV+ V I F GSP VG I R A L VTLELG
Sbjct: 177 --GLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG--LKKVTLELG 232
Query: 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 221
A IV D D+ + V A ++GQ C +R +VH DIY F+ + K +
Sbjct: 233 SNAAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLV 292
Query: 222 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 281
G PL D+G + +E+++ V +A++ GA +L G +GA+ PTV+
Sbjct: 293 VGDPLDEDTDVGPMISEAEAERIEEWVEEAVEGGARLLT----GGKRDGAI---LEPTVL 345
Query: 282 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 341
+V MK++ EE F P++ + F+T +E + +ANDS YGL VF+ +A + A ++
Sbjct: 346 TDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDLQKALKAAREL 405
Query: 342 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLR 380
+ G IND +S + +P+GGVK+SG GR EG R
Sbjct: 406 EVGGVMIND-SSTFRVDHMPYGGVKESGTGR----EGPR 439
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453 |
| >gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Score = 237 bits (606), Expect = 5e-73
Identities = 117/340 (34%), Positives = 173/340 (50%), Gaps = 22/340 (6%)
Query: 45 VEFH-PLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQ 100
FH PLGVVG I+ WN+P P LAA GN +V+K + S +I
Sbjct: 131 YHFHEPLGVVGQIIPWNFPLLMAAWKLAPALAA---GNTVVLKPASQTPLSILVLMELIG 187
Query: 101 AALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVT 157
L P+ +V+V+TGF +E G+ L S + K+ F GS VGR+IM+ A++ L PVT
Sbjct: 188 DLL-----PKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAAENLIPVT 242
Query: 158 LELGGKDAFIVCDDVDVPHV-----AQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQ 212
LELGGK I DD A+ + G+ C R V IY F+ +
Sbjct: 243 LELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYDEFIER 302
Query: 213 VAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAV 272
+ +++ G PL + MGA + EK+ + V+ ++GAE+L G L
Sbjct: 303 AVERFEAIKVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDK 362
Query: 273 DQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQH 332
++ PT+I N+ M++ QEE FGP++ ++ F +EE + +AND+ YGLG V++ +
Sbjct: 363 GYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKDEEEAIAIANDTEYGLGGGVWTRDIN 422
Query: 333 RAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGR 372
RA +A IQ G +N + + PFGG K SG GR
Sbjct: 423 RALRVARGIQTGRVWVNCY--HQYPAHAPFGGYKKSGIGR 460
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480 |
| >gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Score = 236 bits (605), Expect = 9e-73
Identities = 116/348 (33%), Positives = 173/348 (49%), Gaps = 20/348 (5%)
Query: 49 PLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 105
P+GV G I+ WN+P P LA GN +V+K +E + + +I+ A
Sbjct: 145 PVGVCGQIIPWNFPLLMAAWKLAPALAC---GNTVVLKPAEQTPLTALYLASLIKEA--- 198
Query: 106 VGAPENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELG 161
G P +V+V+ G+ T A +SS +DK+ F GS VG++I + A K+ L VTLELG
Sbjct: 199 -GFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQQAAGKSNLKRVTLELG 257
Query: 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 221
GK IV D D+ + + A A + GQ C R +V IY FV + + K
Sbjct: 258 GKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIYDEFVKRSVERAKKRV 317
Query: 222 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 281
G P K + G E +K+ L+ +GA++ G G + PTV
Sbjct: 318 VGNPFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGK----RHGDKGYFIQPTVF 373
Query: 282 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 341
+V M++ +EE FGP+ I KF T +EV++ AN++ YGL AVF+ +A + +
Sbjct: 374 SDVTDDMRIAKEEIFGPVQQIFKFKTIDEVIERANNTTYGLAAAVFTKDIDKAITFSNAL 433
Query: 342 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389
+ G +N + + Q+ PFGG K SG GR G GL+ VK+V
Sbjct: 434 RAGTVWVNCY-NVVSPQA-PFGGYKMSGNGRELGEYGLQEYTEVKTVT 479
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481 |
| >gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Score = 232 bits (594), Expect = 1e-71
Identities = 120/388 (30%), Positives = 184/388 (47%), Gaps = 17/388 (4%)
Query: 4 ASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPF 63
A L EI +I L +KW+KP S + KA V PLGVV I WNYP
Sbjct: 55 AYLTEIAVVLGEIDHALKHLKKWMKPRRVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPL 114
Query: 64 HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETG 123
P++ A+ +GN +V+K SE A + ++I V V+ G E
Sbjct: 115 QLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLIPKYF-----DPEAVAVVEGGVEVA 169
Query: 124 EALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAV 182
AL++ D I F GSP VG+++M A+K LTPVTLELGGK IV D ++ A+
Sbjct: 170 TALLAEPFDHIFFTGSPAVGKIVMEAAAKHLTPVTLELGGKSPCIVDKDANLEVAARRIA 229
Query: 183 RAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 242
++GQ C + VH I + ++ K +K P D G + H +
Sbjct: 230 WGKFLNAGQTCIAPDYVLVHESIKDELIEELKKAIKEFYGEDPKESP-DYGRIINERHFD 288
Query: 243 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPI 302
+L +L++D +++ G ++Y PT++ +V+ LMQEE FGPI+PI
Sbjct: 289 RLASLLDDG-----KVVIGGQVD-----KEERYIAPTILDDVSPDSPLMQEEIFGPILPI 338
Query: 303 MKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPF 362
+ ++ +E ++ N L +FS + + A+ G +ND + +LPF
Sbjct: 339 LTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCVNDVLLHAAIPNLPF 398
Query: 363 GGVKDSGFGRFAGVEGLRACCLVKSVVE 390
GGV +SG G + G G +KSV++
Sbjct: 399 GGVGNSGMGAYHGKAGFDTFSHLKSVLK 426
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426 |
| >gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Score = 233 bits (596), Expect = 1e-71
Identities = 123/358 (34%), Positives = 177/358 (49%), Gaps = 23/358 (6%)
Query: 42 KAKVEFHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRI 98
KA+V P+GVVG I WN+P P LAA G +V+K SE S + I
Sbjct: 113 KARVRREPVGVVGLITPWNFPLLMAAWKVAPALAA---GCTVVLKPSELTSLTELELAEI 169
Query: 99 IQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTP 155
A G P +++V+TG E G L + +DKI F GS G +M+ A++ + P
Sbjct: 170 A----AEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQDIKP 225
Query: 156 VTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAK 215
V+LELGGK IV DD D+ + A+ ++GQ C+ R VH I F+ ++A
Sbjct: 226 VSLELGGKSPIIVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLAT 285
Query: 216 IVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF-GHLSEGAVDQ 274
+++ G PL +G L EK+ + + ++GA +L G HL +G
Sbjct: 286 AAEAIRVGDPLEEGVRLGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRPAHLEKG---- 341
Query: 275 YF-PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHR 333
YF PTV +V ++ +EE FGP++ + F T++E + LANDS YGL AV S R
Sbjct: 342 YFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRDAER 401
Query: 334 AREIAAQIQCGVAAINDFASN-YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 390
+A ++ G+ IN S Q P+GG K SG GR G GL VK +
Sbjct: 402 CDRVAEALEAGIVWIN--CSQPCFPQ-APWGGYKRSGIGRELGEWGLDNYLEVKQITR 456
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456 |
| >gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Score = 232 bits (594), Expect = 2e-71
Identities = 107/344 (31%), Positives = 172/344 (50%), Gaps = 11/344 (3%)
Query: 49 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 108
P GVV IV++N+P + A + +GN +V+K E A S + + L
Sbjct: 116 PYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSALRLAELAREVL----- 170
Query: 109 PENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 165
P + +++ G A G ALV V +I +GS GR IMR A++ + VTLELGGK+A
Sbjct: 171 PPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEGIKHVTLELGGKNA 230
Query: 166 FIVCDDVDVPHVAQIAVRAA-LQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 224
IV D D A AV GQ+C R +VH IY +++V + V ++ G
Sbjct: 231 LIVFPDADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGD 290
Query: 225 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNV 284
P MG L + +++ + ++ A +GA ++ G Y PTV +V
Sbjct: 291 PTDPATTMGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADV 350
Query: 285 NHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCG 344
M++ +EE FGP++ ++++ + E+V AN YGL A+++ +A A +++ G
Sbjct: 351 TPGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDISQAHRTARRVEAG 410
Query: 345 VAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 388
IN + +++ PFGGVK+SG GR +E L + K+V
Sbjct: 411 YVWINGSSRHFL--GAPFGGVKNSGIGREECLEELLSYTQEKNV 452
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456 |
| >gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Score = 232 bits (593), Expect = 2e-71
Identities = 107/345 (31%), Positives = 176/345 (51%), Gaps = 18/345 (5%)
Query: 49 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 108
PLGVV AI +N+P + + + + A+ + N IV+K SE S Y + L G
Sbjct: 120 PLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLS-AIYLADL---LYEAGL 175
Query: 109 PENLVDVITG-FAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 165
P +++ V+TG E G+ L++ VD + F G VG+ I A+ LELGG D
Sbjct: 176 PPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIA--ATAGYKRQLLELGGNDP 233
Query: 166 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 225
IV DD D+ A +AV + +SGQ C +R VH + FV + + ++ G P
Sbjct: 234 LIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDP 293
Query: 226 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVN 285
+ DMG + E + +++N V +A+ +GA +L G+ +GA+ + PTV+ +V
Sbjct: 294 MDPATDMGTVIDEEAAIQIENRVEEAIAQGARVL----LGNQRQGAL---YAPTVLDHVP 346
Query: 286 HTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGV 345
+L+ EE FGP+ P+++ +E + ++N + YGL V + + + ++ G
Sbjct: 347 PDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLDTIKRLVERLDVGT 406
Query: 346 AAINDFASNYMCQSLPFGGVKDSGFGRFAGV-EGLRACCLVKSVV 389
+N+ + + PFGGVKDSG G GV E ++ VK+
Sbjct: 407 VNVNE-VPGFRSELSPFGGVKDSGLGGKEGVREAMKEMTNVKTYS 450
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451 |
| >gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 233 bits (596), Expect = 2e-71
Identities = 117/340 (34%), Positives = 178/340 (52%), Gaps = 25/340 (7%)
Query: 49 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA--- 105
P+GVVGAI WN+P I + A+ +G +V+K SE + ALAA
Sbjct: 160 PVGVVGAITPWNFPLAMITRKVGPALAAGCTVVVKPSELTPLT----------ALAAAEL 209
Query: 106 ---VGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLE 159
G P +++V+ G A E G+AL++S V KI F GS VG+ +M A+ T+ V+LE
Sbjct: 210 ALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGAAATVKRVSLE 269
Query: 160 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 219
LGG FIV DD D+ + A+ + ++SGQ C A R V IY F +K V+
Sbjct: 270 LGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFAEAFSKAVQK 329
Query: 220 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPT 279
+ G G L +K+++ V DA+ KGA++L G S G ++ PT
Sbjct: 330 LVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGK--RHSLGGT--FYEPT 385
Query: 280 VIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAA 339
V+ +V M + +EE FGP+ P+ +F T+EE + +AND+ GL +F+ RA ++
Sbjct: 386 VLGDVTEDMLIFREEVFGPVAPLTRFKTEEEAIAIANDTEAGLAAYIFTRDLQRAWRVSE 445
Query: 340 QIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGL 379
++ G+ +N+ + + PFGGVK SG GR G+
Sbjct: 446 ALEYGIVGVNEGLIS--TEVAPFGGVKQSGLGREGSKYGI 483
|
Length = 498 |
| >gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Score = 232 bits (594), Expect = 4e-71
Identities = 113/354 (31%), Positives = 175/354 (49%), Gaps = 21/354 (5%)
Query: 38 MIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFR 97
+ +K A P+GVV I WN+P + A+ GN +V K +E+ +
Sbjct: 124 LPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPAEDTPACA---LK 180
Query: 98 IIQAALAAVGAPENLVDVITGFAE-TGEALV--SSVDKIIFVGSPGVGRMIMRNASKTLT 154
+++ A G P +V+V+ G E GEALV VD + F GS VG I ++
Sbjct: 181 LVEL-FAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCARPNK 239
Query: 155 PVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSS----GQNCAGAERFYVHRDIYALFV 210
V LE+GGK+ IV DD D+ +A+ AL S+ GQ C R VH +Y F+
Sbjct: 240 RVALEMGGKNPIIVMDDADL----DLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFL 295
Query: 211 SQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEG 270
+ + K + G L + DMG L EK+ N ++GA +L G L+ G
Sbjct: 296 KRFVERAKRLRVGDGLDEETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGG--ERLTGG 353
Query: 271 AVDQ--YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFS 328
++ + PTV +V M++ QEE FGP++ +++ ++ EE +++AND+ YGL A+++
Sbjct: 354 GYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEAIEIANDTEYGLSSAIYT 413
Query: 329 GSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRA 381
++A ++ G+ +N LPFGGVK SG G R AG L A
Sbjct: 414 EDVNKAFRARRDLEAGITYVNAPTIGAEVH-LPFGGVKKSGNGHREAGTTALDA 466
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478 |
| >gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Score = 231 bits (592), Expect = 6e-71
Identities = 123/396 (31%), Positives = 188/396 (47%), Gaps = 29/396 (7%)
Query: 4 ASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIH---KKAKVEFHPLGVVGAIVSWN 60
+L E+ T + I + E ++ L + G K A+V PLGVV AI +N
Sbjct: 95 DALKEVDRTIDYIRDTIEELKR-LDGDS-LPGDWFPGTKGKIAQVRREPLGVVLAIGPFN 152
Query: 61 YPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF- 119
YP + + ++ A+ GN +V K + G A G P+ +V+V+TG
Sbjct: 153 YPLNLTVSKLIPALIMGNTVVFKPATQGVLLGIPLAE----AFHDAGFPKGVVNVVTGRG 208
Query: 120 AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHV 177
E G+ LV+ +D I F GS VG + + + LELGGKD IV D D+
Sbjct: 209 REIGDPLVTHGRIDVISFTGSTEVGNRLKKQHPMK--RLVLELGGKDPAIVLPDADLELA 266
Query: 178 AQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCL 237
A+ V+ AL SGQ C +R VH + V + + V + G P D+ L
Sbjct: 267 AKEIVKGALSYSGQRCTAIKRVLVHESVADELVELLKEEVAKLKVGMPWDNGVDITPLID 326
Query: 238 LEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFG 297
+ ++ ++ L++DA+ KGA +L G PT++ V M+L EE FG
Sbjct: 327 PKSADFVEGLIDDAVAKGATVLNGG------GREGGNLIYPTLLDPVTPDMRLAWEEPFG 380
Query: 298 PIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMC 357
P++PI++ N EE ++LAN S YGL ++F+ ++AR++A ++ G IN C
Sbjct: 381 PVLPIIRVNDIEEAIELANKSNYGLQASIFTKDINKARKLADALEVGTVNINS-----KC 435
Query: 358 Q----SLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389
Q PF G KDSG G + LR+ K +V
Sbjct: 436 QRGPDHFPFLGRKDSGIGTQGIGDALRSMTRRKGIV 471
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473 |
| >gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 228 bits (584), Expect = 7e-70
Identities = 110/340 (32%), Positives = 165/340 (48%), Gaps = 9/340 (2%)
Query: 43 AKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAA 102
A PLGV I +WNYP + A+ +GN +V K SEN + I++ A
Sbjct: 127 AYTIREPLGVCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPSENTPLTALKVAEIMEEA 186
Query: 103 LAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLE 159
G P+ + +V+ G AE G LV+ V K+ F G G+ IM A+ L VT+E
Sbjct: 187 ----GLPKGVFNVVQGDGAEVGPLLVNHPDVAKVSFTGGVPTGKKIMAAAAGHLKHVTME 242
Query: 160 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 219
LGGK IV DD D+ A+ S+GQ C+ R +VH+ I F++++ + +
Sbjct: 243 LGGKSPLIVFDDADLESAVDGAMLGNFFSAGQVCSNGTRVFVHKKIKERFLARLVERTER 302
Query: 220 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPT 279
+ G P +MG L H +K+ + + +GA + G + PT
Sbjct: 303 IKLGDPFDEATEMGPLISAAHRDKVLSYIEKGKAEGATLATGGGRPENVGLQNGFFVEPT 362
Query: 280 VIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAA 339
V + M +++EE FGP+M ++ F+ ++EV+ AND+ YGL VF+ RA +A
Sbjct: 363 VFADCTDDMTIVREEIFGPVMTVLTFSDEDEVIARANDTEYGLAGGVFTADLGRAHRVAD 422
Query: 340 QIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGL 379
Q++ G IN + N PFGG K SG GR G L
Sbjct: 423 QLEAGTVWINTY--NLYPAEAPFGGYKQSGIGRENGKAAL 460
|
Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467 |
| >gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Score = 226 bits (577), Expect = 5e-69
Identities = 115/368 (31%), Positives = 175/368 (47%), Gaps = 33/368 (8%)
Query: 30 EYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSE 86
EY SMI ++ P+GVV I WNYP P LAA GN +V+K SE
Sbjct: 105 EYLPGHTSMIRRE------PIGVVAQIAPWNYPLMMAAWKIAPALAA---GNTVVLKPSE 155
Query: 87 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFAE-TGEALVS--SVDKIIFVGSPGVGR 143
+ ++ A LAA P +V+V+ G G+ALV+ V + GS G+
Sbjct: 156 TTPLTT-----LLLAELAAEVLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGK 210
Query: 144 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHR 203
+ R A+ TL V LELGGK IV DD D+ A ++GQ+C A R YVH
Sbjct: 211 KVARAAADTLKRVHLELGGKAPVIVFDDADLDAAVAGIATAGYYNAGQDCTAACRVYVHE 270
Query: 204 DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS 263
+Y FV+ + + V ++ G P +MG L E++ V + A +L G
Sbjct: 271 SVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFV-ERAPAHARVLTGGR 329
Query: 264 FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLG 323
++ PTV+ V +++QEE FGP++ + F+ ++E ++LAND YGL
Sbjct: 330 ----RAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLA 385
Query: 324 CAVFSGSQHRAREIAAQIQCGVAAIND---FASNYMCQSLPFGGVKDSGFGRFAGVEGLR 380
+V++ RA ++A++ G +N A+ +P GG K SG+G+ + L
Sbjct: 386 SSVWTRDVGRAMRLSARLDFGTVWVNTHIPLAAE-----MPHGGFKQSGYGKDLSIYALE 440
Query: 381 ACCLVKSV 388
+K V
Sbjct: 441 DYTRIKHV 448
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450 |
| >gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 226 bits (577), Expect = 8e-69
Identities = 128/332 (38%), Positives = 189/332 (56%), Gaps = 20/332 (6%)
Query: 49 PLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 105
P+GVVG I+ WN+PF P LAA GN +VIK S S S +IIQ L
Sbjct: 136 PIGVVGQIIPWNFPFLMAAWKLAPALAA---GNTVVIKPSSTTSLSLLELAKIIQDVL-- 190
Query: 106 VGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162
P+ +V+++TG +++GE L++ +DK+ F GS VGR + A+K L P TLELGG
Sbjct: 191 ---PKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAAKKLIPATLELGG 247
Query: 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 222
K A I+ DD + + A L + GQ C R +V IY FV+++ + ++V
Sbjct: 248 KSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKV 307
Query: 223 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTV 280
G PL MGA + +K+ + V+ A ++GA+IL G L+E +D+ + PT+
Sbjct: 308 GNPLDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGG--HRLTENGLDKGFFIEPTL 365
Query: 281 IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQ 340
IVNV + M++ QEE FGP+ ++KF T++EV+ +ANDS YGLG VF+ +RA +A
Sbjct: 366 IVNVTNDMRVAQEEIFGPVATVIKFKTEDEVIDMANDSEYGLGGGVFTKDINRALRVARA 425
Query: 341 IQCGVAAINDFASNYMCQSLPFGGVKDSGFGR 372
++ G +N + N + PFGG K SG GR
Sbjct: 426 VETGRVWVNTY--NQIPAGAPFGGYKKSGIGR 455
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475 |
| >gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 225 bits (575), Expect = 9e-69
Identities = 115/330 (34%), Positives = 166/330 (50%), Gaps = 14/330 (4%)
Query: 49 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 108
PLGVVG I +N+P + A+ GN +V+K SG +I G
Sbjct: 110 PLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGV---VIARLFEEAGL 166
Query: 109 PENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 166
P ++ V+ G A+ GEALV V I F GS VGR + A + L V+LELGGK+A
Sbjct: 167 PAGVLHVLPGGADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKKVSLELGGKNAL 226
Query: 167 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 226
IV DD D+ A A GQ C A R VH + + +++A K + G P
Sbjct: 227 IVLDDADLDLAASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPA 286
Query: 227 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNH 286
G+ +G L +++ +V+D++ GA + A G++ +G ++ PTV+ V
Sbjct: 287 TGQVALGPLINARQLDRVHAIVDDSVAAGARLEAGGTY----DG---LFYRPTVLSGVKP 339
Query: 287 TMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVA 346
M EE FGP+ P+ F++DEE V LAND+ YGL + S RA +A +++ G+
Sbjct: 340 GMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALADRLRTGML 399
Query: 347 AINDFASNYMCQSLPFGGVKDSGFG-RFAG 375
IND N + PFGG+ SG G RF G
Sbjct: 400 HINDQTVNDEPHN-PFGGMGASGNGSRFGG 428
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443 |
| >gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 226 bits (578), Expect = 1e-68
Identities = 114/348 (32%), Positives = 168/348 (48%), Gaps = 20/348 (5%)
Query: 49 PLGVVGAIVSWNYPFHNIF----NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALA 104
PLGV I +WNYP I P LAA GN ++ K SE + I A
Sbjct: 142 PLGVCAGIGAWNYPIQ-IACWKSAPALAA---GNAMIFKPSEVTPLTALKLAEIYTEA-- 195
Query: 105 AVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162
G P+ + +V+ G G L + K+ F G G+ +M A+ +L VT+ELGG
Sbjct: 196 --GLPDGVFNVVQGDGRVGAWLTEHPDIAKVSFTGGVPTGKKVMAAAAASLKEVTMELGG 253
Query: 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 222
K IV DD D+ A IA+ A SSGQ C R +V + I A F +++ + V+ +
Sbjct: 254 KSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEARLLERVERIRI 313
Query: 223 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTV 280
G P+ + G L H +K+ + +GA +L G L+EG + PTV
Sbjct: 314 GDPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGG--ERLTEGGFANGAFVAPTV 371
Query: 281 IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQ 340
+ M +++EE FGP+M ++ F+ ++EV+ AND+ YGL VF+ RA + Q
Sbjct: 372 FTDCTDDMTIVREEIFGPVMSVLTFDDEDEVIARANDTEYGLAAGVFTADLSRAHRVIHQ 431
Query: 341 IQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 388
++ G+ IN +P GG K SG GR G+ L +KSV
Sbjct: 432 LEAGICWIN--TWGESPAEMPVGGYKQSGIGRENGIATLEHYTQIKSV 477
|
Length = 488 |
| >gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Score = 224 bits (573), Expect = 3e-68
Identities = 125/346 (36%), Positives = 183/346 (52%), Gaps = 16/346 (4%)
Query: 49 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA-VG 107
P+GVVG I+ WN+P + A+ GN IV+K +E S A LAA G
Sbjct: 141 PIGVVGQIIPWNFPLLMFAWKVGPALACGNTIVLKPAEQTPLSALLA-----AKLAAEAG 195
Query: 108 APENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGK 163
P+ +++++TGF T A ++S VDK+ F GS VG++IM+ A+K+ L PVTLELGGK
Sbjct: 196 LPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLAAKSNLKPVTLELGGK 255
Query: 164 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 223
FIVC+D DV ++A A + GQ C R +VH IY FV + G
Sbjct: 256 SPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVG 315
Query: 224 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVN 283
P + G E EK+ + + ++GA ++ G G+ Y PT+ +
Sbjct: 316 DPFRKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGD----RIGSKGYYIQPTIFSD 371
Query: 284 VNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQC 343
V MK+ ++E FGP+ I+KF T +EV+K AN+S+YGL VFS + A ++ ++
Sbjct: 372 VKDDMKIARDEIFGPVQSILKFKTVDEVIKRANNSKYGLAAGVFSKNIDTANTLSRALKA 431
Query: 344 GVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389
G +N + + S+PFGG K SG GR G+ L VK+VV
Sbjct: 432 GTVWVNCY--DVFDASIPFGGYKMSGIGREKGIYALNNYLQVKAVV 475
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476 |
| >gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 223 bits (570), Expect = 9e-68
Identities = 119/339 (35%), Positives = 177/339 (52%), Gaps = 16/339 (4%)
Query: 41 KKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYF-RII 99
K+ +V PLGVVG I WN+P H + A+ GN +V+K + + +G +I
Sbjct: 122 KENRVYREPLGVVGVISPWNFPLHLSMRSVAPALALGNAVVLKPASDTPITGGLLLAKIF 181
Query: 100 QAALAAVGAPENLVDVITG-FAETGEALVSS-VDKII-FVGSPGVGRMIMRNASKTLTPV 156
+ A G P+ +++V+ G +E G+A V V ++I F GS VGR I A + L V
Sbjct: 182 EEA----GLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGRHLKKV 237
Query: 157 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 216
LELGG + F+V +D D+ AV GQ C R VH D+Y FV + +
Sbjct: 238 ALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKFVER 297
Query: 217 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 276
VK++ G P +G L + L + + A+++GA +L G A
Sbjct: 298 VKALPYGDPSDPDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGE-------AEGNVL 350
Query: 277 PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRARE 336
PTV+ +V + M++ +EE FGP+ PI+K + +EE ++LAND+ YGL AVF+ R +
Sbjct: 351 EPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEYGLSGAVFTSDLERGVQ 410
Query: 337 IAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG 375
A +I G+ IND N +PFGG K+SG GRF G
Sbjct: 411 FARRIDAGMTHINDQPVNDE-PHVPFGGEKNSGLGRFNG 448
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465 |
| >gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 223 bits (570), Expect = 1e-67
Identities = 113/373 (30%), Positives = 181/373 (48%), Gaps = 41/373 (10%)
Query: 30 EYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLA------AVFSGNGIVIK 83
EY SMI + P+GVV +I WNYP M+A A+ +GN +V+K
Sbjct: 125 EYLEGHTSMIRRD------PVGVVASIAPWNYPL------MMAAWKLAPALAAGNTVVLK 172
Query: 84 VSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPG 140
SE + A LAA P +++V+TG A G+ALV V + GS
Sbjct: 173 PSEITPLT-ALKL----AELAADILPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIA 227
Query: 141 VGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFY 200
G+ ++ A+ ++ LELGGK IV DD D+ V + ++GQ+C A R Y
Sbjct: 228 TGKHVLSAAADSVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIY 287
Query: 201 VHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKG-AEIL 259
R IY V+++A V ++ G P ++G L H +++ V A G ++
Sbjct: 288 AQRGIYDDLVAKLAAAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKALGHIRVV 347
Query: 260 ARGSFGHLSEGAVDQ---YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAN 316
G A D Y+ PT++ +++Q E FGP++ + F+ +++ V+ AN
Sbjct: 348 TGGE-------APDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWAN 400
Query: 317 DSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQS-LPFGGVKDSGFGRFAG 375
DS YGL +V++ RA ++A++Q G +N ++M S +P GG K SG+G+
Sbjct: 401 DSDYGLASSVWTRDVGRAHRVSARLQYGCTWVNT---HFMLVSEMPHGGQKQSGYGKDMS 457
Query: 376 VEGLRACCLVKSV 388
+ GL +V+ V
Sbjct: 458 LYGLEDYTVVRHV 470
|
Length = 475 |
| >gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 223 bits (570), Expect = 2e-67
Identities = 131/361 (36%), Positives = 187/361 (51%), Gaps = 19/361 (5%)
Query: 42 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 101
K V PLGVVG I WNYP + A+ +G V+K SE AS + C A
Sbjct: 144 KGYVLKEPLGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKPSELASVT-CLEL----A 198
Query: 102 ALAA-VGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVT 157
+ VG P +++V+TG E G L S VDKI F GS GR IM A++ + PV+
Sbjct: 199 DICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATGRKIMTAAAQMVKPVS 258
Query: 158 LELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 217
LELGGK IV DDVD+ + A+ ++GQ C+ R VH I + F+ ++ K
Sbjct: 259 LELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIASEFLEKLVKWA 318
Query: 218 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF-GHLSEGAVDQYF 276
K++ PL +G + EK+ ++ A +GA IL G HL +G +
Sbjct: 319 KNIKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGF---FI 375
Query: 277 PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRARE 336
PT+I +V +M++ +EE FGP++ + F+T++E ++LANDS YGL AV S R
Sbjct: 376 EPTIITDVTTSMQIWREEVFGPVLCVKTFSTEDEAIELANDSHYGLAGAVISNDLERCER 435
Query: 337 IAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV----EDR 392
++ Q G+ IN + CQ P+GG+K SGFGR G GL VK V ++
Sbjct: 436 VSEAFQAGIVWIN-CSQPCFCQ-APWGGIKRSGFGRELGEWGLENYLSVKQVTKYISDEP 493
Query: 393 W 393
W
Sbjct: 494 W 494
|
Length = 503 |
| >gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 220 bits (562), Expect = 2e-66
Identities = 103/346 (29%), Positives = 161/346 (46%), Gaps = 23/346 (6%)
Query: 48 HPLGVVGAIVSWNYPFHNIF--NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 105
+PLGVVG I ++N+P + N +A V GN +V K SE + +I+ L
Sbjct: 132 NPLGVVGVITAFNFPV-AVPGWNAAIALV-CGNTVVWKPSETTPLTAIAVTKILAEVLEK 189
Query: 106 VGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK 163
G P +V+++TG + GE LV V + F GS VGR + ++ V LELGG
Sbjct: 190 NGLPPGVVNLVTGGGDGGELLVHDPRVPLVSFTGSTEVGRRVGETVARRFGRVLLELGGN 249
Query: 164 DAFIVCDDVDVPHVAQIAVRAALQSS----GQNCAGAERFYVHRDIYALFVSQVAKIVKS 219
+A IV DD D+ +AVRA L ++ GQ C R VH +Y F+ ++ K K
Sbjct: 250 NAIIVMDDADL----DLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEFLERLVKAYKQ 305
Query: 220 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFG-HLSEGAVDQYF-P 277
V G PL +G L ++ +A++ G +G +
Sbjct: 306 VRIGDPLDEGTLVGPL----INQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYVE 361
Query: 278 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREI 337
PT++ V +++QEE F PI+ ++KF++ EE + + ND GL ++F+ A
Sbjct: 362 PTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAINNDVPQGLSSSIFTEDLREAFRW 421
Query: 338 --AAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRA 381
CG+ +N S FGG K++G GR +G + +
Sbjct: 422 LGPKGSDCGIVNVNIPTSGAEIG-GAFGGEKETGGGRESGSDAWKQ 466
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478 |
| >gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Score = 218 bits (557), Expect = 3e-66
Identities = 112/379 (29%), Positives = 175/379 (46%), Gaps = 18/379 (4%)
Query: 6 LGEIMTTCEKITWLLSEGEKWLKPEYRSSG--RSMIHKKAKVEFHPLGVVGAIVSWNYPF 63
L E+ I +L +KW K E G M K ++ PLGVV I WNYP
Sbjct: 64 LTEVSGVKNDILHMLKNLKKWAKDEKVKDGPLAFMFGK-PRIRKEPLGVVLIIGPWNYPV 122
Query: 64 HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITG-FAET 122
+P++ A+ +G +V+K SE + ++ L + V+ G ET
Sbjct: 123 LLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVPKYL-----DPDAFQVVQGGVPET 177
Query: 123 GEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAV 182
L DKI + GS VGR+I A+K LTPVTLELGGK IV + D+ A+ +
Sbjct: 178 TALLEQKFDKIFYTGSGRVGRIIAEAAAKHLTPVTLELGGKSPVIVTKNADLELAAKRIL 237
Query: 183 RAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 242
++GQ C + V +Y FV ++ K++ G A D + H
Sbjct: 238 WGKFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPGGANASP-DYTRIVNPRHFN 296
Query: 243 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPI 302
+L++L++ KG +++ G ++ PPT++ +V+ LM EE FGP++PI
Sbjct: 297 RLKSLLDTT--KG-KVVIGGEMD-----EATRFIPPTIVSDVSWDDSLMSEELFGPVLPI 348
Query: 303 MKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPF 362
+K + +E +K+ N L +F+ + I + + G IND + + PF
Sbjct: 349 IKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSGGVVINDTLIHVGVDNAPF 408
Query: 363 GGVKDSGFGRFAGVEGLRA 381
GGV DSG+G + G G
Sbjct: 409 GGVGDSGYGAYHGKYGFDT 427
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436 |
| >gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Score = 216 bits (551), Expect = 4e-65
Identities = 115/351 (32%), Positives = 167/351 (47%), Gaps = 25/351 (7%)
Query: 37 SMIHKKAKVEFHPLGVVGAIVSWNYP---FHNIFNPMLAAVFSGNGIVIKVSENASWSGC 93
S++ ++ P+GV G IV WN P P LAA G +V+K A +
Sbjct: 111 SLVLRE------PMGVAGIIVPWNSPVVLLVRSLAPALAA---GCTVVVKP---AGQTAQ 158
Query: 94 FYFRIIQAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNAS 150
II+ P +V++ T +E LV+S VD I F GS GR IM A+
Sbjct: 159 INAAIIRILAEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAA 218
Query: 151 KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFV 210
TL + LELGGK IV DD D+ RA +GQ C R V R I
Sbjct: 219 PTLKRLGLELGGKTPCIVFDDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVR 278
Query: 211 SQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG--SFGHLS 268
++A + +V GP L DMG L + +++ +V A+ GAE++ RG L+
Sbjct: 279 DRLAARLAAVKVGPGLDPASDMGPLIDRANVDRVDRMVERAIAAGAEVVLRGGPVTEGLA 338
Query: 269 EGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFS 328
+GA + PT++ + ++QEE FGP++ + F+ + E V LAND+ YGL +V++
Sbjct: 339 KGA---FLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAASVWT 395
Query: 329 GSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGL 379
RA +A I+ G IND+ + GG + SG GR GV L
Sbjct: 396 RDLARAMRVARAIRAGTVWINDWNKLF--AEAEEGGYRQSGLGRLHGVAAL 444
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 211 bits (540), Expect = 2e-64
Identities = 81/230 (35%), Positives = 116/230 (50%), Gaps = 10/230 (4%)
Query: 1 MVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWN 60
++ +LGE+ + + +K PE S +A V PLGVVG I WN
Sbjct: 47 PIEEALGEVARAIDTFRYAAGLADKLGGPELPSPDP---GGEAYVRREPLGVVGVITPWN 103
Query: 61 YPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA 120
+P + A+ +GN +V+K SE + ++Q A G P +V+V+ G
Sbjct: 104 FPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQEA----GLPPGVVNVVPGGG 159
Query: 121 -ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHV 177
E G AL+S VDKI F GS VG+ IM+ A++ L PVTLELGGK IV +D D+
Sbjct: 160 DEVGAALLSHPRVDKISFTGSTAVGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAA 219
Query: 178 AQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA 227
+ AV A ++GQ C A R VH IY FV ++ ++ V P+A
Sbjct: 220 VEGAVFGAFFNAGQICTAASRLLVHESIYDEFVEKLVTVLVDVDPDMPIA 269
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 215 bits (548), Expect = 3e-64
Identities = 121/346 (34%), Positives = 180/346 (52%), Gaps = 16/346 (4%)
Query: 49 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 108
P+GVVG I+ WN+P F + A+ +G +V+K +E S FY + + A G
Sbjct: 158 PIGVVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQTPLSALFYAHLAKLA----GV 213
Query: 109 PENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGKD 164
P+ +++V+TGF T A ++S VDK+ F GS VGR IM+ A+ + L V+LELGGK
Sbjct: 214 PDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQAAATSNLKQVSLELGGKS 273
Query: 165 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 224
++ DD DV +A+ + G+ C + R YV IY FV ++ + K G
Sbjct: 274 PLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVKKLVEKAKDWVVGD 333
Query: 225 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNV 284
P + G + EK+ + + +GA +L G G Y PT+ +V
Sbjct: 334 PFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGK----PCGDKGYYIEPTIFTDV 389
Query: 285 NHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCG 344
MK+ Q+E FGP+M +MKF T EE +K AN+++YGL + + A ++ I+ G
Sbjct: 390 TEDMKIAQDEIFGPVMSLMKFKTVEEAIKKANNTKYGLAAGIVTKDLDVANTVSRSIRAG 449
Query: 345 VAAIN-DFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389
+N FA + C PFGG K SGFGR G++ L VKSVV
Sbjct: 450 TIWVNCYFAFDPDC---PFGGYKMSGFGRDQGMDALDKYLQVKSVV 492
|
Length = 501 |
| >gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Score = 212 bits (541), Expect = 3e-64
Identities = 114/339 (33%), Positives = 175/339 (51%), Gaps = 22/339 (6%)
Query: 49 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 108
LGV I+ WN+PF I M A+ +GN IVIK SE + F I + +G
Sbjct: 71 ALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTP-NNAIAFAKI---VDEIGL 126
Query: 109 PENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 165
P+ + +++ G ET G+ L + V + GS G IM A+K +T V LELGGK
Sbjct: 127 PKGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMAAAAKNITKVCLELGGKAP 186
Query: 166 FIVCDDVDVPHVAQIAVRAALQS----SGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 221
IV DD D+ +AV+A + S SGQ C AER YV + IY FV+++ + +++V
Sbjct: 187 AIVMDDADLD----LAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQ 242
Query: 222 AGPPLAG-KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTV 280
G P MG L E+++ V A+++GA + G + Y+PPT+
Sbjct: 243 FGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGK----AVEGKGYYYPPTL 298
Query: 281 IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQ 340
+++V M +M EE FGP++P++ F+T EE + +ANDS YGL ++++ + + A +
Sbjct: 299 LLDVRQEMSIMHEETFGPVLPVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKG 358
Query: 341 IQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGL 379
++ G IN N+ G + SG G G GL
Sbjct: 359 LKFGETYIN--RENFEAMQGFHAGWRKSGIGGADGKHGL 395
|
Length = 409 |
| >gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 212 bits (542), Expect = 7e-64
Identities = 130/382 (34%), Positives = 196/382 (51%), Gaps = 27/382 (7%)
Query: 7 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRSM----IHKKAKVEFHPLGVVGAIVSWNYP 62
GEI+ + W E + R G ++ K+ V P+GV AI WN+P
Sbjct: 78 GEILYAASFLEWFAEEAK-------RVYGDTIPSPQSDKRLIVIKQPVGVCAAITPWNFP 130
Query: 63 FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-- 120
I AA+ +G +V+K +E S R+ + A G P+ +++VITG
Sbjct: 131 AAMITRKAGAALAAGCTVVVKPAEQTPLSALALARLAEQA----GIPKGVLNVITGSRAK 186
Query: 121 ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVA 178
E G L +S V KI F GS VG+++M+ ++ T+ V++ELGG FIV DD D+
Sbjct: 187 EVGNVLTTSPLVRKISFTGSTNVGKILMKQSASTVKKVSMELGGNAPFIVFDDADLDQAV 246
Query: 179 QIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLL 238
+ A+ + +++GQ C A R YVH IY F ++A+ VK + G L G L
Sbjct: 247 EGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINE 306
Query: 239 EHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGP 298
+ EK++ + DA++KGA+++ G H G +F PTV+ NV M + +EE FGP
Sbjct: 307 KAVEKVEKHIADAVEKGAKVVTGGKR-HELGG---NFFEPTVLSNVTADMLVSKEETFGP 362
Query: 299 IMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIND-FASNYMC 357
+ P+ KF+ +EEV+ +AND+ GL FS R +A ++ G+ IN SN +
Sbjct: 363 LAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLSRIWRVAEALEYGMVGINTGLISNVVA 422
Query: 358 QSLPFGGVKDSGFGRFAGVEGL 379
PFGGVK SG GR G+
Sbjct: 423 ---PFGGVKQSGLGREGSKYGI 441
|
Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448 |
| >gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Score = 213 bits (543), Expect = 9e-64
Identities = 119/345 (34%), Positives = 176/345 (51%), Gaps = 16/345 (4%)
Query: 49 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 108
P+GV G I+ WN+P + A+ +GN IV+K SE S + ++I A G
Sbjct: 144 PIGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPLSALYMTKLIPEA----GF 199
Query: 109 PENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGKD 164
P +++V++G+ T +SS +DK+ F GS VGR +M A+K+ L VTLELGGK
Sbjct: 200 PPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAKSNLKKVTLELGGKS 259
Query: 165 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 224
IV DD D+ + GQ C R YV IY FV + + K + G
Sbjct: 260 PNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKVGD 319
Query: 225 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF-PPTVIVN 283
P A G E++ + + +GA + G H +EG YF PT+ +
Sbjct: 320 PFAEDTFQGPQVSQIQYERIMSYIESGKAEGAT-VETGGKRHGNEG----YFIEPTIFTD 374
Query: 284 VNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQC 343
V MK+++EE FGP++ ++KF T+EE +K ANDS YGL AVF+ + + A +A ++
Sbjct: 375 VTEDMKIVKEEIFGPVVAVIKFKTEEEAIKRANDSTYGLAAAVFTNNINNAIRVANALKA 434
Query: 344 GVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 388
G +N + N + +PFGG K SG GR G L +K+V
Sbjct: 435 GTVWVNCY--NLLHHQVPFGGYKQSGIGRELGEYALENYTQIKAV 477
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481 |
| >gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Score = 211 bits (540), Expect = 3e-63
Identities = 111/345 (32%), Positives = 179/345 (51%), Gaps = 18/345 (5%)
Query: 49 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 108
P+GVV IV WN+ + AA+ +G IVIK SE + R+ + A A G
Sbjct: 142 PVGVVAGIVPWNFSVMIAVWKIGAALATGCTIVIKPSEFTPLT---LLRVAELAKEA-GI 197
Query: 109 PENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 166
P+ +++V+ G G L+S V K+ F GS G+ I R A+ LT VTLELGGK+A
Sbjct: 198 PDGVLNVVNGKGAVGAQLISHPDVAKVSFTGSVATGKKIGRQAASDLTRVTLELGGKNAA 257
Query: 167 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 226
D D+ V + + A GQ CA ERFYVHR + V+++ + + S G P+
Sbjct: 258 AFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDELVTKLKQALSSFQVGSPM 317
Query: 227 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ---YFPPTVIVN 283
G L H +K+ + ++DA +G EI+ G A+ + PT+++
Sbjct: 318 DESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGG-------EALAGEGYFVQPTLVLA 370
Query: 284 VNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQC 343
+ +LM+EE FGP++ + + +EE+++L ND+ +GL +V++ + +A +I+
Sbjct: 371 RSADSRLMREETFGPVVSFVPYEDEEELIQLINDTPFGLTASVWTNNLSKALRYIPRIEA 430
Query: 344 GVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 388
G +N ++ ++PFGG+K SG GR G + +KSV
Sbjct: 431 GTVWVN--MHTFLDPAVPFGGMKQSGIGREFGSAFIDDYTELKSV 473
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477 |
| >gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Score = 208 bits (532), Expect = 3e-62
Identities = 121/345 (35%), Positives = 177/345 (51%), Gaps = 30/345 (8%)
Query: 49 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 108
PLGVVGAI+ WN P + A+ +GN +V+K +E+A + I+ L
Sbjct: 117 PLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAVLLLAEILAQVL----- 171
Query: 109 PENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 165
P +++VITG+ E G ALV VDK+ F GS VG++I R A+ L PV+LELGGK
Sbjct: 172 PAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADRLIPVSLELGGKSP 231
Query: 166 FIVCDDVDVPHVAQIAV---RAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 222
IV D D+ A+ R Q GQ+C R +VH DIY F+ ++ + +
Sbjct: 232 MIVFPDADLDDAVDGAIAGMRFTRQ--GQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKI 289
Query: 223 GPPLAGKYDMGALCLLEHSEKLQNLVNDALD-----KGAEILARGSF---GHLSEGAVDQ 274
G PL D+GA+ SEK V +D GA +L G G L++G
Sbjct: 290 GDPLDEATDIGAII----SEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGF--- 342
Query: 275 YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRA 334
+ PT+ V++ +L +EE FGP++ + + ++EV+ +ANDS YGL V++ RA
Sbjct: 343 FVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRDLGRA 402
Query: 335 REIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGL 379
A ++ G +N QS +GG K SG GR A +EG+
Sbjct: 403 LRAAHALEAGWVQVNQGGGQQPGQS--YGGFKQSGLGREASLEGM 445
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457 |
| >gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Score = 207 bits (528), Expect = 1e-61
Identities = 113/343 (32%), Positives = 175/343 (51%), Gaps = 12/343 (3%)
Query: 49 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 108
P+GVVG I WN+PF + + A+ +G +V+K SE S + + + + A G
Sbjct: 119 PIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTT---LMLAELLIEA-GL 174
Query: 109 PENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 165
P +V+++TG+ A G+A+ VD + F GS VG+ I A++ L V+LELGGK+
Sbjct: 175 PAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAARNLKKVSLELGGKNP 234
Query: 166 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 225
IV D D+ A V ++G+ C R VH I FV+ V + V G P
Sbjct: 235 QIVFADADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDP 294
Query: 226 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVN 285
L + +GA+ K+ + V+ +GA +L G L+ A ++ PT+ +V
Sbjct: 295 LDPETKVGAIINEAQLAKITDYVDAGRAEGATLLLGG--ERLASAA-GLFYQPTIFTDVT 351
Query: 286 HTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGV 345
M + +EE FGP++ ++ F+T +E + LAND+ YGL V+S A +A +I+ G
Sbjct: 352 PDMAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDIDTALTVARRIRAGT 411
Query: 346 AAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 388
+N F LPFGG K SG GR G G+ +K+V
Sbjct: 412 VWVNTFLDGS--PELPFGGFKQSGIGRELGRYGVEEYTELKTV 452
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454 |
| >gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Score = 206 bits (527), Expect = 2e-61
Identities = 112/337 (33%), Positives = 173/337 (51%), Gaps = 20/337 (5%)
Query: 49 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 108
P+GVVG IV WN+P + + A+ GN +V+K +E + + I A G
Sbjct: 147 PVGVVGQIVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTALLFAEICAEA----GL 202
Query: 109 PENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 166
P +++++TG G AL + VDK+ F GS VGR + R + T ++LELGGK F
Sbjct: 203 PPGVLNIVTGNGSFGSALANHPGVDKVAFTGSTEVGRALRRATAGTGKKLSLELGGKSPF 262
Query: 167 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 226
IV DD D+ + V A + GQ C R V + + ++ + + + G PL
Sbjct: 263 IVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKLKERMSHLRVGDPL 322
Query: 227 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG----SFGHLSEGAVDQYFPPTVIV 282
DMGA+ ++++ LV + +GA++ G S G ++PPT+
Sbjct: 323 DKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGP--------FYPPTLFT 374
Query: 283 NVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ 342
NV ++ QEE FGP++ ++ F T +E V LAN++ YGL +V+S + A E+A ++
Sbjct: 375 NVPPASRIAQEEIFGPVLVVLTFRTAKEAVALANNTPYGLAASVWSENLSLALEVALSLK 434
Query: 343 CGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGL 379
GV IN N + FGG ++SGFGR G EGL
Sbjct: 435 AGVVWIN--GHNLFDAAAGFGGYRESGFGREGGKEGL 469
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480 |
| >gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Score = 207 bits (528), Expect = 5e-61
Identities = 125/350 (35%), Positives = 185/350 (52%), Gaps = 24/350 (6%)
Query: 49 PLGVVGAIVSWNYP---FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 105
P+GV G I+ WN+P F P LA GN IV+K +E S + +++ A
Sbjct: 195 PIGVAGQIIPWNFPLLMFAWKVGPALAC---GNTIVLKTAEQTPLSALYAAKLLHEA--- 248
Query: 106 VGAPENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELG 161
G P +++V++GF T A ++S VDK+ F GS G++++ A+K+ L PVTLELG
Sbjct: 249 -GLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAAKSNLKPVTLELG 307
Query: 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQV-AKIVKSV 220
GK FIVC+D DV ++A A + GQ C R +VH +Y FV + A+ +K V
Sbjct: 308 GKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRV 367
Query: 221 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS-FGHLSEGAVDQYFPPT 279
G P + G E EK+ + ++ GA + G FG S+G Y PT
Sbjct: 368 -VGDPFKKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRFG--SKG---YYIQPT 421
Query: 280 VIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAA 339
V NV M + Q+E FGP+ I+KF +EV++ AN++RYGL VF+ + A ++
Sbjct: 422 VFSNVQDDMLIAQDEIFGPVQSILKFKDLDEVIRRANNTRYGLAAGVFTQNLDTANTLSR 481
Query: 340 QIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389
++ G +N F + ++PFGG K SG GR G+ L VK+VV
Sbjct: 482 ALRVGTVWVNCF--DVFDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAVV 529
|
Length = 538 |
| >gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Score = 204 bits (522), Expect = 7e-61
Identities = 116/406 (28%), Positives = 189/406 (46%), Gaps = 31/406 (7%)
Query: 8 EIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF 67
EI +I + + +KW+KP+ + K+ + + P GVV I WNYPF
Sbjct: 59 EIGFVLSEINYAIKHLKKWMKPKRVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLAL 118
Query: 68 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALV 127
P++ A+ +GN V+K SE + +II+ E V V+ G E + L+
Sbjct: 119 APLIGAIAAGNTAVLKPSELTPNTSKVIAKIIEETF-----DEEYVAVVEGGVEENQELL 173
Query: 128 SS-VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAAL 186
D I F GS VG+++M A+K LTPVTLELGGK IV +D ++ A+ V
Sbjct: 174 DQKFDYIFFTGSVRVGKIVMEAAAKHLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKF 233
Query: 187 QSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQN 246
++GQ C + VH + F+ ++ + +K PL D G + +H ++L
Sbjct: 234 LNAGQTCVAPDYVLVHESVKEKFIKELKEEIKKFYGEDPLESP-DYGRIINEKHFDRLAG 292
Query: 247 LVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN 306
L+ +I+ G+ Y PT++ NV +MQEE FGPI+P++ ++
Sbjct: 293 LL-----DNGKIVFGGNTDRE-----TLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYD 342
Query: 307 TDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIND----FASNYMCQSLPF 362
T +E +++ L +FS + +++ + G IND A+ Y+ PF
Sbjct: 343 TLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGCINDTIMHLANPYL----PF 398
Query: 363 GGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYP 408
GGV +SG G + G KS+++ T P++YP
Sbjct: 399 GGVGNSGMGSYHGKYSFDTFSHKKSILKK------STWFDLPLRYP 438
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449 |
| >gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Score = 203 bits (519), Expect = 2e-60
Identities = 107/335 (31%), Positives = 174/335 (51%), Gaps = 21/335 (6%)
Query: 49 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 108
P+GVV AI +N+P + + + + A+ +G +V+K + S +I+ A G
Sbjct: 123 PVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASKTPLSALELAKILVEA----GV 178
Query: 109 PENLVDVITG-FAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 165
PE ++ V+TG G+A + V + F GS VG + NA + LELGG
Sbjct: 179 PEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANAGGK--RIALELGGNAP 236
Query: 166 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 225
IV D D+ + + +GQ C +R YVH ++Y F+ VK + G P
Sbjct: 237 VIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDP 296
Query: 226 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVN 285
L D+G L E +E+++ V +A++ GA +L G +GA+ F PTV+ +V
Sbjct: 297 LDEDTDVGPLISEEAAERVERWVEEAVEAGARLLCGGE----RDGAL---FKPTVLEDVP 349
Query: 286 HTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGV 345
KL EE FGP++PI++++ EE +++AN + YGL +F+ + A + A +++ G
Sbjct: 350 RDTKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDLNVAFKAAEKLEVGG 409
Query: 346 AAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLR 380
+ND +S + +PFGGVK+SG GR EG+
Sbjct: 410 VMVND-SSAFRTDWMPFGGVKESGVGR----EGVP 439
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453 |
| >gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Score = 202 bits (517), Expect = 3e-60
Identities = 110/355 (30%), Positives = 175/355 (49%), Gaps = 33/355 (9%)
Query: 32 RSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPF----HNIFNPMLAAVFSGNGIVIKVSEN 87
R GR + ++ P+G V AI +N+P H + P +AA G V+K +
Sbjct: 111 RGEGRQGLVRRF-----PIGPVSAITPFNFPLNLVAHKV-APAIAA---GCPFVLKPASR 161
Query: 88 ASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMI 145
S I+ LA G P+ V+ + + LV+ + + F GSP VG +
Sbjct: 162 TPLSAL----ILGEVLAETGLPKGAFSVLPCSRDDADLLVTDERIKLLSFTGSPAVGWDL 217
Query: 146 MRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDI 205
A K V LELGG A IV D D+ AQ + A +GQ+C +R VHR +
Sbjct: 218 KARAGKK--KVVLELGGNAAVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSV 275
Query: 206 YALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFG 265
Y F S++ VK++ G P D+G + +E+++ VN+A+D GA++L G
Sbjct: 276 YDEFKSRLVARVKALKTGDPKDDATDVGPMISESEAERVEGWVNEAVDAGAKLLTGGK-- 333
Query: 266 HLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCA 325
+GA+ PT++ +V M++ EE FGP++ + ++ +E + NDS++GL
Sbjct: 334 --RDGAL---LEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAG 388
Query: 326 VFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLR 380
VF+ +A +++ G IND + + +P+GGVKDSG GR EG+R
Sbjct: 389 VFTRDLEKALRAWDELEVGGVVINDVPT-FRVDHMPYGGVKDSGIGR----EGVR 438
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452 |
| >gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 203 bits (519), Expect = 4e-60
Identities = 119/341 (34%), Positives = 178/341 (52%), Gaps = 21/341 (6%)
Query: 49 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 108
PLGVVG I WN P + + A+ GN +V+K SE + ++ A VG
Sbjct: 139 PLGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPSEETPGTATLLGEVMNA----VGV 194
Query: 109 PENLVDVITGF--AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD 164
P+ + +V+ GF GE L VD I F G G IM+ A+ + PV+ ELGGK+
Sbjct: 195 PKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMKAAADGVKPVSFELGGKN 254
Query: 165 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 224
A IV D D +R+A ++GQ C G ER YV R I+ FV+ + +S+ G
Sbjct: 255 AAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFVAALKARAESLKIGV 314
Query: 225 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG---SFG-HLSEGAVDQYFPPTV 280
P +MG L EH +K+ + A+++GA ++ G FG L+ GA + PT+
Sbjct: 315 PDDPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGA---WVQPTI 371
Query: 281 IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQ 340
+ + +++ EE FGP I F+++EEV+ LAND+ YGL +V++ RA +A Q
Sbjct: 372 WTGLPDSARVVTEEIFGPCCHIAPFDSEEEVIALANDTPYGLAASVWTEDLSRAHRVARQ 431
Query: 341 IQCGVAAINDFASNYMCQSL--PFGGVKDSGFGRFAGVEGL 379
++ G+ +N ++ + L PFGG K SG GR GV L
Sbjct: 432 MEVGIVWVN----SWFLRDLRTPFGGSKLSGIGREGGVHSL 468
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481 |
| >gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Score = 201 bits (513), Expect = 4e-59
Identities = 120/404 (29%), Positives = 185/404 (45%), Gaps = 25/404 (6%)
Query: 8 EIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF 67
E++ T +I LL +++LKPE + K+ + PLGVV I +WNYP +
Sbjct: 68 EVLLTVAEIEHLLKHLDEYLKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTL 127
Query: 68 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAE-TGEAL 126
P+ A+ +GN +V+K SE + + +++ L + V VI G E T E L
Sbjct: 128 IPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLTKYL-----DPSYVRVIEGGVEVTTELL 182
Query: 127 VSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAAL 186
D I F GSP VG+++M+ A++ LTP TLELGGK IV ++ A+
Sbjct: 183 KEPFDHIFFTGSPRVGKLVMQAAAENLTPCTLELGGKSPVIVDKSCNLKVAARRIAWGKF 242
Query: 187 QSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQN 246
++GQ C + VHR I F+ + + +K G D + H+++L
Sbjct: 243 LNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEF-FGEDPKKSEDYSRIVNEFHTKRLAE 301
Query: 247 LVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN 306
L+ D G +++ G ++Y PT+IVN + LMQEE FGPI+PI+ +
Sbjct: 302 LIKD---HGGKVVYGGEVD-----IENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYE 353
Query: 307 TDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVK 366
+EV++ N L F + + G IND + + +LPFGGV
Sbjct: 354 NIDEVLEFINSRPKPLALYYFGEDKRHKELVLENTSSGAVVINDCVFHLLNPNLPFGGVG 413
Query: 367 DSGFGRFAGVEGLRACCLVKSVVED----------RWWPYIKTK 400
+SG G + G G K V+ R+ PY K
Sbjct: 414 NSGMGAYHGKYGFDTFSHPKPVLNKSTGNSFDLSLRYPPYTSFK 457
|
Length = 493 |
| >gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 196 bits (501), Expect = 1e-57
Identities = 114/337 (33%), Positives = 169/337 (50%), Gaps = 19/337 (5%)
Query: 46 EFH-PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALA 104
FH PLGVVG I+ WN+P + A+ +GN +V+K +E S +I L
Sbjct: 132 HFHEPLGVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPAEQTPASILVLMELIGDLL- 190
Query: 105 AVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161
P +V+V+ GF E G+ L SS + K+ F G GR+IM+ AS+ + PVTLELG
Sbjct: 191 ----PPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYASENIIPVTLELG 246
Query: 162 GKDAFIVCDDVDVPHVA------QIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAK 215
GK I DV A + V AL + G+ C R + IY F+ + +
Sbjct: 247 GKSPNIFFADVMDADDAFFDKALEGFVMFAL-NQGEVCTCPSRALIQESIYDRFMERALE 305
Query: 216 IVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQY 275
VK++ G PL + +GA LE EK+ + ++ ++GAE+L G L Y
Sbjct: 306 RVKAIKQGNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGY 365
Query: 276 FPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAR 335
+ PT + M++ QEE FGP++ + F +EE +++AND+ YGLG V++ + A
Sbjct: 366 YVPTTFKG-GNKMRIFQEEIFGPVLAVTTFKDEEEALEIANDTLYGLGAGVWTRDGNTAY 424
Query: 336 EIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGR 372
+ IQ G N + Y + FGG K SG GR
Sbjct: 425 RMGRGIQAGRVWTNCYHL-YPAHA-AFGGYKQSGIGR 459
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479 |
| >gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 196 bits (500), Expect = 2e-57
Identities = 100/343 (29%), Positives = 175/343 (51%), Gaps = 18/343 (5%)
Query: 50 LGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 109
LGV+ AI +N+P + + + + A+ + N +V+K SE S Y I L G P
Sbjct: 140 LGVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEKTPLS-ALYLADI---LYEAGLP 195
Query: 110 ENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 166
++ V+TG E + L+++ VD + F G +G+ I A LELGG D
Sbjct: 196 PQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIAARAG--YRRQVLELGGNDPL 253
Query: 167 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 226
IV +D D+ A +AV+ + ++SGQ C +R V + F + + ++ G P+
Sbjct: 254 IVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYGDPM 313
Query: 227 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNH 286
DMG + + + VN+A+ +GA +L G++ +GA+ + PTV+ V+
Sbjct: 314 DPSVDMGTVIDEAAAILFEARVNEAIAQGARLLL----GNVRDGAL---YAPTVLDRVDP 366
Query: 287 TMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVA 346
+M L++EE FGP+ P+++F ++ ++++N + YGL V + A++Q G
Sbjct: 367 SMTLVREETFGPVSPVIRFCDIDDAIRISNSTAYGLSSGVCTNRLDYITRFIAELQVGTV 426
Query: 347 AINDFASNYMCQSLPFGGVKDSGFGRFAGV-EGLRACCLVKSV 388
+ + Y + PFGG+KDSG G GV E +++ +K+
Sbjct: 427 NVWE-VPGYRLELTPFGGIKDSGLGYKEGVQEAMKSFTNLKTY 468
|
This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472 |
| >gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 196 bits (500), Expect = 2e-57
Identities = 115/340 (33%), Positives = 170/340 (50%), Gaps = 24/340 (7%)
Query: 48 HPLGVVGAIVSWNYPFHNIFNPMLA------AVFSGNGIVIKVSENASWSGCFYFRIIQA 101
P+G VG I WN PF ML+ A+ GN +V+K +E WS R+ +
Sbjct: 134 VPVGPVGLITPWNAPF------MLSTWKIAPALAFGNTVVLKPAE---WSPLTAARLAEI 184
Query: 102 ALAAVGAPENLVDVITGFAET-GEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTL 158
A A G P+ + +++ GF E G+ALV+ V + F G G +IMRN + TL ++
Sbjct: 185 AKEA-GLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGADTLKRFSM 243
Query: 159 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 218
ELGGK IV DD D+ V +G+ C + R V I FV ++ + V+
Sbjct: 244 ELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEKLVERVR 303
Query: 219 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAV---DQY 275
++ G PL + ++G L EH K+ V A +GA IL G G Y
Sbjct: 304 AIRVGHPLDPETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNY 363
Query: 276 FPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAR 335
PTV ++ M++ QEE FGP++ ++ F +EE ++ AND+RYGL V++ RA
Sbjct: 364 VLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDEEEAIEKANDTRYGLAGYVWTNDVGRAH 423
Query: 336 EIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG 375
+A ++ G+ +N + N PFGGVK SG GR G
Sbjct: 424 RVALALEAGMIWVN--SQNVRHLPTPFGGVKASGIGREGG 461
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488 |
| >gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Score = 189 bits (483), Expect = 1e-54
Identities = 107/338 (31%), Positives = 160/338 (47%), Gaps = 20/338 (5%)
Query: 49 PLGVVGAIVSWNYPFHNIFNPM-LAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 107
PLGV I WN+P I M AA+ +GN +V+K +E+ I++ A G
Sbjct: 166 PLGVGAVISPWNFPL-AILAGMTTAALVTGNTVVLKPAEDTPVIAAKLVEILEEA----G 220
Query: 108 APENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKT------LTPVTL 158
P +V+ + G E G+ LV V I F GS VG I A+K L V
Sbjct: 221 LPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQPGQKWLKRVIA 280
Query: 159 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 218
E+GGK+A IV +D D+ A+ VR+A GQ C+ R VH +Y F+ ++ + K
Sbjct: 281 EMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDEFLERLVERTK 340
Query: 219 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF-P 277
++ G P + MG + ++++ + K L G G + E A + YF
Sbjct: 341 ALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIG--KSEGRLLLG--GEVLELAAEGYFVQ 396
Query: 278 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREI 337
PT+ +V +L QEE FGP++ ++K +E +++AND+ YGL VFS S
Sbjct: 397 PTIFADVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSRSPEHLERA 456
Query: 338 AAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG 375
+ + G N + + PFGG K SG G AG
Sbjct: 457 RREFEVGNLYANRKITGALVGRQPFGGFKMSGTGSKAG 494
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512 |
| >gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Score = 188 bits (481), Expect = 1e-54
Identities = 105/352 (29%), Positives = 167/352 (47%), Gaps = 22/352 (6%)
Query: 31 YRSSGRSM--IHKKAKVEFH--PLGVVGAIVSWNYPFHNI----FNPMLAAVFSGNGIVI 82
R SG ++ +VE PLGVVG I WN+P I P LA GN +V
Sbjct: 113 LRLSGETLPSTRPGVEVETTREPLGVVGLITPWNFPI-AIPAWKIAPALAY---GNTVVF 168
Query: 83 KVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSP 139
K +E S + +++ L G P + +++ G +E G+ALV VD + F GS
Sbjct: 169 KPAELTPASA---WALVEI-LEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGST 224
Query: 140 GVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERF 199
VGR I A+ V LE+GGK+ +V DD D+ + AV+ A S+GQ C + R
Sbjct: 225 AVGRRIAAAAAARGARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRL 284
Query: 200 YVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEIL 259
V I+ FV + + K++ G L D+G + EK + A +GA+++
Sbjct: 285 IVTEGIHDRFVEALVERTKALKVGDALDEGVDIGPVVSERQLEKDLRYIEIARSEGAKLV 344
Query: 260 ARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSR 319
G L Y P + V + M++ +EE FGP+ +++ +E + +AND+
Sbjct: 345 YGG--ERLKRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALAIANDTE 402
Query: 320 YGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG 371
+GL + + S A +++ GV +N + + +PFGG K S +G
Sbjct: 403 FGLSAGIVTTSLKHATHFKRRVEAGVVMVN-LPTAGVDYHVPFGGRKGSSYG 453
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473 |
| >gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family | Back alignment and domain information |
|---|
Score = 187 bits (477), Expect = 3e-54
Identities = 109/337 (32%), Positives = 165/337 (48%), Gaps = 18/337 (5%)
Query: 49 PLGVVGAIVSWNYPFHNI----FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALA 104
+GVVGAI WN+P H I P LAA GN +V+K + + W +I
Sbjct: 141 AVGVVGAITPWNFP-HQINLAKLGPALAA---GNTVVLKPAPDTPWCAAVLGELIAEH-- 194
Query: 105 AVGAPENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161
P +V+++T AL++ VD + F GS GR +M +A+ TL V LELG
Sbjct: 195 -TDFPPGVVNIVTSSDHRLGALLAKDPRVDMVSFTGSTATGRAVMADAAATLKKVFLELG 253
Query: 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 221
GK AFIV DD D+ +A +GQ CA R V R Y V+ A + S+
Sbjct: 254 GKSAFIVLDDADLAAACSMAAFTVCMHAGQGCAITTRLVVPRARYDEAVAAAAATMGSIK 313
Query: 222 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 281
G P G + +++Q+ ++ A+ +G G G ++ + PTVI
Sbjct: 314 PGDPADPGTVCGPVISARQRDRVQSYLDLAVAEGGRFACGG--GRPADRDRGFFVEPTVI 371
Query: 282 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 341
+++ ++ +EE FGP++ ++ + D++ V++ANDS YGL VF RA +AA++
Sbjct: 372 AGLDNNARVAREEIFGPVLTVIAHDGDDDAVRIANDSPYGLSGTVFGADPERAAAVAARV 431
Query: 342 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEG 378
+ G +N + PFGG K SG GR GV G
Sbjct: 432 RTGTVNVN--GGVWYSADAPFGGYKQSGIGREMGVAG 466
|
This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480 |
| >gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Score = 183 bits (468), Expect = 4e-53
Identities = 124/408 (30%), Positives = 189/408 (46%), Gaps = 35/408 (8%)
Query: 4 ASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFH--PLGVVGAIVSWNY 61
A L EI+ +I + +S +W+KPE +++ V + PLGVV I +WNY
Sbjct: 55 AVLSEILLVKNEIKYAISNLPEWMKPEP--VKKNLATLLDDVYIYKEPLGVVLIIGAWNY 112
Query: 62 PFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA- 120
P P++ A+ +GN +VIK SE + + +I L + V+ G
Sbjct: 113 PLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPKYL-----DKECYPVVLGGVE 167
Query: 121 ETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQI 180
ET E L D I + GS VG+++M+ A+K LTPVTLELGGK V D+ A+
Sbjct: 168 ETTELLKQRFDYIFYTGSTSVGKIVMQAAAKHLTPVTLELGGKSPCYVDKSCDIDVAARR 227
Query: 181 AVRAALQSSGQNCAGAERFYV--HRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLL 238
++GQ C + YV ++ FV + K +K P D G +
Sbjct: 228 IAWGKFINAGQTCIAPD--YVLCTPEVQEKFVEALKKTLKEFYGEDPKESP-DYGRIIND 284
Query: 239 EHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGP 298
H ++L+ L+ G ++ G ++Y PTV+ +V + +MQEE FGP
Sbjct: 285 RHFQRLKKLL-----SGGKVAIGGQTD-----EKERYIAPTVLTDVKPSDPVMQEEIFGP 334
Query: 299 IMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQ 358
I+PI+ N +E ++ N L VFS ++ +I + G +ND +Y
Sbjct: 335 ILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVNDTIMHYTLD 394
Query: 359 SLPFGGVKDSGFGRFAGVEGL-----RACCLVKS-----VVEDRWWPY 396
SLPFGGV +SG G + G + CLVKS + R+ PY
Sbjct: 395 SLPFGGVGNSGMGAYHGKYSFDTFSHKRSCLVKSLNMEKLNSLRYPPY 442
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443 |
| >gnl|CDD|143455 cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Score = 182 bits (463), Expect = 2e-52
Identities = 115/378 (30%), Positives = 176/378 (46%), Gaps = 20/378 (5%)
Query: 3 DASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYP 62
++ E+ + E +KW+ PE + + KA++ PLGVV I +WN+P
Sbjct: 55 ESFRDEVSVLVSSCKLAIKELKKWMAPEKVKTPLTTFPAKAEIVSEPLGVVLVISAWNFP 114
Query: 63 FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET 122
F P++ A+ +GN +V+K SE A + ++I L + VI G
Sbjct: 115 FLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLIPEYLDT-----KAIKVIEGGVPE 169
Query: 123 GEALVSSV-DKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQ-I 180
AL+ DKI F GSP VGR+IM A+K LTPVTLELGGK IV VD+ + I
Sbjct: 170 TTALLEQKWDKIFFTGSPRVGRIIMAAAAKHLTPVTLELGGKCPVIVDSTVDLKVAVRRI 229
Query: 181 AVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 240
A ++GQ C + V + + ++ P K D+ + H
Sbjct: 230 AGGKWGCNNGQACIAPDYVLVEESFAPTLIDALKNTLEKFFGENPKESK-DLSRIVNSHH 288
Query: 241 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ---YFPPTVIVNVNHTMKLMQEEAFG 297
++L L++D A+ + G G D+ Y PT++++ +M EE FG
Sbjct: 289 FQRLSRLLDDP--SVADKIVHG-------GERDEKNLYIEPTILLDPPLDSSIMTEEIFG 339
Query: 298 PIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMC 357
P++PI+ EE +++ N L VF+ ++ R I A+ G ND Y
Sbjct: 340 PLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSSGGVTFNDTVVQYAI 399
Query: 358 QSLPFGGVKDSGFGRFAG 375
+LPFGGV +SGFG + G
Sbjct: 400 DTLPFGGVGESGFGAYHG 417
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. Length = 432 |
| >gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 178 bits (454), Expect = 5e-51
Identities = 117/399 (29%), Positives = 184/399 (46%), Gaps = 45/399 (11%)
Query: 8 EIMTTCEKITWLLSEGEKWLKPE---YRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFH 64
E + + + E L E + G S +A V + PLGVV A++ WN+P
Sbjct: 83 EALKCAKGFRYYAEHAEALLADEPADAAAVGAS----RAYVRYQPLGVVLAVMPWNFPLW 138
Query: 65 NIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVIT--GFAET 122
+ A+ +GN ++K + N + Q AL L D+ GF +
Sbjct: 139 QVVRFAAPALMAGNVGLLKHASN----------VPQTALY-------LADLFRRAGFPDG 181
Query: 123 --GEALVSS--VDKII---------FVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVC 169
LV S V+ I+ GS GR + A + LELGG D FIV
Sbjct: 182 CFQTLLVGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGDEIKKTVLELGGSDPFIVM 241
Query: 170 DDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGK 229
D+ A+ AV A +Q++GQ+C A+RF VH D+Y F + + ++ G P
Sbjct: 242 PSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDPTDPD 301
Query: 230 YDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMK 289
D+G L + ++++ V+DA+ GA IL G +G ++PPTVI ++ M+
Sbjct: 302 TDVGPLATEQGRDEVEKQVDDAVAAGATILCG---GKRPDGP-GWFYPPTVITDITPDMR 357
Query: 290 LMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIN 349
L EE FGP+ + + +E +++AN + +GLG ++ + ++ G IN
Sbjct: 358 LYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTRDEAEQERFIDDLEAGQVFIN 417
Query: 350 DFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 388
+Y LPFGGVK SG+GR G+R C +K+V
Sbjct: 418 GMTVSY--PELPFGGVKRSGYGRELSAHGIREFCNIKTV 454
|
Length = 457 |
| >gnl|CDD|165847 PLN02203, PLN02203, aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 178 bits (454), Expect = 8e-51
Identities = 119/380 (31%), Positives = 171/380 (45%), Gaps = 19/380 (5%)
Query: 2 VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNY 61
V+A E+ + LS +KW+ P+ A+V PLGVV SWN+
Sbjct: 61 VEAYRDEVGVLTKSANLALSNLKKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNF 120
Query: 62 PFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAE 121
P P++ A+ +GN +V+K SE A + F I L + V VI G
Sbjct: 121 PIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAANIPKYLDS-----KAVKVIEGGPA 175
Query: 122 TGEALVSSV-DKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQI 180
GE L+ DKI F GSP VGR+IM A+K LTPV LELGGK IV D + ++
Sbjct: 176 VGEQLLQHKWDKIFFTGSPRVGRIIMTAAAKHLTPVALELGGKCPCIV-DSLSSSRDTKV 234
Query: 181 AVRAALQS-----SGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGAL 235
AV + +GQ C + V + + + +K P K M +
Sbjct: 235 AVNRIVGGKWGSCAGQACIAIDYVLVEERFAPILIELLKSTIKKFFGENPRESKS-MARI 293
Query: 236 CLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEA 295
+H ++L NL+ D A I+ GS + PT+++N +M EE
Sbjct: 294 LNKKHFQRLSNLLKDPRVA-ASIVHGGSID-----EKKLFIEPTILLNPPLDSDIMTEEI 347
Query: 296 FGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY 355
FGP++PI+ E+ + N L F+ ++ R I ++ G ND Y
Sbjct: 348 FGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILSETSSGSVTFNDAIIQY 407
Query: 356 MCQSLPFGGVKDSGFGRFAG 375
C SLPFGGV +SGFGR+ G
Sbjct: 408 ACDSLPFGGVGESGFGRYHG 427
|
Length = 484 |
| >gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Score = 176 bits (448), Expect = 6e-50
Identities = 114/373 (30%), Positives = 183/373 (49%), Gaps = 24/373 (6%)
Query: 7 GEIMTTCEKITWLLSEGEKWLK---PEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPF 63
GEI I W EG++ P +++ R ++ K+ P+GV AI WN+P
Sbjct: 107 GEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQ------PIGVTAAITPWNFPA 160
Query: 64 HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ET 122
I A+ +G +V+K + +S + A G P + +V+TG A
Sbjct: 161 AMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRA----GIPAGVFNVVTGSAGAV 216
Query: 123 GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQI 180
G L S+ V K+ F GS +GR +M +K + V+LELGG FIV DD D+ +
Sbjct: 217 GGELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEG 276
Query: 181 AVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 240
A+ + +++GQ C A R YV +Y F ++ + V + G L +G L +
Sbjct: 277 ALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLEKGVTIGPLIDEKA 336
Query: 241 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIM 300
K++ + DAL+KGA ++ G H G +F PT++V+V K+ +EE FGP+
Sbjct: 337 VAKVEEHIADALEKGARVVCGGK-AHELGG---NFFQPTILVDVPANAKVAKEETFGPLA 392
Query: 301 PIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIND-FASNYMCQS 359
P+ +F + +V+ AND+ +GL ++ R + ++ G+ IN SN +
Sbjct: 393 PLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISN---EV 449
Query: 360 LPFGGVKDSGFGR 372
PFGG+K SG GR
Sbjct: 450 APFGGIKASGLGR 462
|
Length = 482 |
| >gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 172 bits (438), Expect = 1e-48
Identities = 118/390 (30%), Positives = 189/390 (48%), Gaps = 20/390 (5%)
Query: 7 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 66
E+ + W G LK E + +++A +E+ PLG + AI+ WN+P +
Sbjct: 88 AEVAKSANLCDWYAEHGPAMLKAE----PTLVENQQAVIEYRPLGTILAIMPWNFPLWQV 143
Query: 67 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEAL 126
+ + +GNG ++K + N GC ++I G P+ + + G +
Sbjct: 144 MRGAVPILLAGNGYLLKHAPNVM--GCA--QLIAQVFKDAGIPQGVYGWLNA-DNDGVSQ 198
Query: 127 VSSVDKIIFV---GSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVR 183
+ + +I V GS G I A L LELGG D FIV +D D+ + AV
Sbjct: 199 MINDSRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLNDADLELAVKAAVA 258
Query: 184 AALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEK 243
Q++GQ CA A+RF + I + F + ++ G P + +G + + ++
Sbjct: 259 GRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDE 318
Query: 244 LQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIM 303
L + V L +GA +L G GA + Y+ PTV+ NV M +EE FGP+ I
Sbjct: 319 LHHQVEATLAEGARLLLG---GEKIAGAGN-YYAPTVLANVTPEMTAFREELFGPVAAIT 374
Query: 304 KFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDF-ASNYMCQSLPF 362
E ++LANDS +GL +F+ + +AR++AA+++CG IN + AS+ + F
Sbjct: 375 VAKDAEHALELANDSEFGLSATIFTTDETQARQMAARLECGGVFINGYCASD---ARVAF 431
Query: 363 GGVKDSGFGRFAGVEGLRACCLVKSVVEDR 392
GGVK SGFGR GL C +++V +DR
Sbjct: 432 GGVKKSGFGRELSHFGLHEFCNIQTVWKDR 461
|
Length = 462 |
| >gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Score = 173 bits (439), Expect = 1e-48
Identities = 108/350 (30%), Positives = 177/350 (50%), Gaps = 24/350 (6%)
Query: 49 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA-VG 107
P+GV G ++ WNYP + M A + +GN +V+K ++ + + A L G
Sbjct: 147 PIGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVLKPAQVTPLTALKF-----AELTVKAG 201
Query: 108 APENLVDVITGFAE-TGEALVSSVD--KIIFVGSPGVGRMIMRNASKT-LTPVTLELGGK 163
P+ +++++ G G+ L D K+ F GS +G+ IM++ + + L V+LELGGK
Sbjct: 202 FPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMKSCAVSNLKKVSLELGGK 261
Query: 164 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 223
I+ D D+ ++ + + + G+NC A R +V I+ FV +V + VK + G
Sbjct: 262 SPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHDEFVRRVVEEVKKMKIG 321
Query: 224 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ---YFPPTV 280
PL D G H +KL + +GA ++ G VD+ +F PTV
Sbjct: 322 DPLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGK-------QVDRPGFFFEPTV 374
Query: 281 IVNVNHTMKLMQEEAFGPIMPIMKFNTD--EEVVKLANDSRYGLGCAVFSGSQHRAREIA 338
+V M + +EE+FGPIM I KF+ + V++ AND+ YGL VF+ ++A ++
Sbjct: 375 FTDVEDHMFIAKEESFGPIMIISKFDDGDVDGVLQRANDTEYGLASGVFTKDINKALYVS 434
Query: 339 AQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 388
+++ G +N + N + PFGG K SGFG+ G E L K+V
Sbjct: 435 DKLEAGTVFVNTY--NKTDVAAPFGGFKQSGFGKDLGEEALNEYLKTKTV 482
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486 |
| >gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 172 bits (436), Expect = 4e-48
Identities = 105/341 (30%), Positives = 175/341 (51%), Gaps = 23/341 (6%)
Query: 40 HKKAKVEFHPLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYF 96
H+ A + P+GV+ AIV WN+P P LAA GN +++K SE + S
Sbjct: 148 HELAMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAA---GNSVILKPSEKSPLSAIRLA 204
Query: 97 RIIQAALAAVGAPENLVDVITGFA-ETGEALV--SSVDKIIFVGSPGVGRMIMRNASKT- 152
+ + A G P+ +++V+TGF E G+AL + +D I F GS G+ ++++A +
Sbjct: 205 GLAKEA----GLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDSN 260
Query: 153 LTPVTLELGGKDAFIVCDDV-DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVS 211
+ V LE GGK A IV D D+ A + GQ C R + I F++
Sbjct: 261 MKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLA 320
Query: 212 QVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGA 271
+ + ++ G PL MG L H++ + + + + KG +L + G +
Sbjct: 321 LLKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHSFIREGESKGQLLLDGRNAGLAA--- 377
Query: 272 VDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 331
PT+ V+V+ L +EE FGP++ + +F ++E+ ++LANDS+YGLG AV++
Sbjct: 378 ---AIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWTRDL 434
Query: 332 HRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGR 372
RA ++ +++ G +N++ M ++PFGG K SG GR
Sbjct: 435 SRAHRMSRRLKAGSVFVNNYNDGDM--TVPFGGYKQSGNGR 473
|
Length = 494 |
| >gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Score = 164 bits (415), Expect = 2e-45
Identities = 111/364 (30%), Positives = 179/364 (49%), Gaps = 21/364 (5%)
Query: 30 EYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENAS 89
EY SMI + PLGVV +I WNYP + A+ +GN +V+K SE
Sbjct: 124 EYLEGHTSMIRRD------PLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITP 177
Query: 90 WSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVS--SVDKIIFVGSPGVGRMIM 146
+ A LA P +V+++ G +T G+ L V + GS G I+
Sbjct: 178 LTA-LKL----AELAKDIFPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHIL 232
Query: 147 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIY 206
+ + ++ +ELGGK IV DD D+ V + ++GQ+C A R Y R IY
Sbjct: 233 SHTAPSIKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIY 292
Query: 207 ALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGH 266
V ++ V ++ +G P ++G L L H E++ V +A G + G G
Sbjct: 293 DTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVMKAVEEAKALGHIKVITG--GE 350
Query: 267 LSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAV 326
+G YF PT++ ++Q+E FGP++ I F+ +E+VV ANDS+YGL +V
Sbjct: 351 KRKGN-GYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNWANDSQYGLASSV 409
Query: 327 FSGSQHRAREIAAQIQCGVAAINDFASNYMCQS-LPFGGVKDSGFGRFAGVEGLRACCLV 385
++ RA ++A++Q G +N +++M S +P GG K SG+G+ + GL +V
Sbjct: 410 WTKDVGRAHRLSARLQYGCTWVN---THFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVV 466
Query: 386 KSVV 389
+ ++
Sbjct: 467 RHIM 470
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472 |
| >gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Score = 158 bits (401), Expect = 1e-43
Identities = 96/354 (27%), Positives = 156/354 (44%), Gaps = 40/354 (11%)
Query: 36 RSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFY 95
M +A + P GV+ +N+P H ++ A+ +GN +V K SE
Sbjct: 84 TPMAQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELM 143
Query: 96 FRIIQAALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMR----NA 149
+ + A G P +++++ G ETGEAL + +D ++F GS G ++ R
Sbjct: 144 VELWEEA----GLPPGVLNLVQGGRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRP 199
Query: 150 SKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYA-L 208
K L LE+GG + +V D D+ A + V++A ++GQ C A R V
Sbjct: 200 GKILA---LEMGGNNPLVVWDVADIDAAAYLIVQSAFLTAGQRCTCARRLIVPDGAVGDA 256
Query: 209 FVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEIL-------AR 261
F+ ++ + K + G P A MG L + + + D L G E L A
Sbjct: 257 FLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAMERLVAG 316
Query: 262 GSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 321
+F LS G +D V + EE FGP++ + +++ +E + LAN +R+G
Sbjct: 317 TAF--LSPGIID----------VTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFG 364
Query: 322 LGCAVFSGSQHRAREIAAQIQCGVAAIN---DFASNYMCQSLPFGGVKDSGFGR 372
L + S + A+I+ G+ N AS+ + PFGGV SG R
Sbjct: 365 LSAGLLSDDEALFERFLARIRAGIVNWNRPTTGASS----TAPFGGVGLSGNHR 414
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431 |
| >gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 158 bits (402), Expect = 4e-43
Identities = 96/331 (29%), Positives = 158/331 (47%), Gaps = 21/331 (6%)
Query: 49 PLGVVGAIVSWNYPFHNIFNPM-LAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 107
PLGV I WN+PF I M LAA+ +GN +++K + + + +++ A G
Sbjct: 171 PLGVGVVISPWNFPF-AIMAGMTLAAIVAGNTVLLKPASDTPVIAAKFVEVLEEA----G 225
Query: 108 APENLVDVITGF-AETGEALVSSVDK--IIFVGSPGVGRMIMRNASKT------LTPVTL 158
P +V+ + G +E G+ LV I F GS VG I A+K L V
Sbjct: 226 LPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYERAAKVQPGQIWLKRVIA 285
Query: 159 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 218
E+GGKDA +V +D D+ A+ V +A SGQ C+ R VH D+Y + +V ++ K
Sbjct: 286 EMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVYDEVLEKVVELTK 345
Query: 219 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPP 278
++ G P Y MG + ++ + + ++ G E R G + + + P
Sbjct: 346 ELTVGNPEDNAY-MGPVI----NQASFDKIMSYIEIGKE-EGRLVLGGEGDDSKGYFIQP 399
Query: 279 TVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIA 338
T+ +V+ ++MQEE FGP++ +K + +++AN++ YGL AV S ++ +
Sbjct: 400 TIFADVDPKARIMQEEIFGPVVAFIKAKDFDHALEIANNTEYGLTGAVISNNREHLEKAR 459
Query: 339 AQIQCGVAAINDFASNYMCQSLPFGGVKDSG 369
+ G N + + PFGG SG
Sbjct: 460 REFHVGNLYFNRGCTGAIVGYHPFGGFNMSG 490
|
Length = 514 |
| >gnl|CDD|177831 PLN02174, PLN02174, aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Score = 154 bits (389), Expect = 1e-41
Identities = 121/429 (28%), Positives = 201/429 (46%), Gaps = 29/429 (6%)
Query: 16 ITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVF 75
I L + + W+ PE + + A++ PLGVV I +WNYPF +P++ A+
Sbjct: 79 IKLALKQLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAIS 138
Query: 76 SGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITG-FAETGEALVSSVDKII 134
+GN +V+K SE A S ++++ L + + V V+ G ET L DKI
Sbjct: 139 AGNAVVLKPSELAPASSALLAKLLEQYLDS-----SAVRVVEGAVTETTALLEQKWDKIF 193
Query: 135 FVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVP-HVAQIAVRAALQSSGQNC 193
+ GS +GR+IM A+K LTPV LELGGK +V D D+ V +I ++GQ C
Sbjct: 194 YTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDLKVTVRRIIAGKWGCNNGQAC 253
Query: 194 AGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALD 253
+ ++ + + K +++ P+ K DM + H ++L L+++
Sbjct: 254 ISPDYILTTKEYAPKVIDAMKKELETFYGKNPMESK-DMSRIVNSTHFDRLSKLLDEK-- 310
Query: 254 KGAEILARGSFGHLSEGAVDQ---YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEE 310
E+ + +G G D+ PT++++V +M EE FGP++PI+ N EE
Sbjct: 311 ---EVSDKIVYG----GEKDRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEE 363
Query: 311 VVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGF 370
+ L +F+ ++ AA + G +ND A + +LPFGGV +SG
Sbjct: 364 SFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIVVNDIAVHLALHTLPFGGVGESGM 423
Query: 371 GRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVAENGFEFQESLVEALYGLNIW 430
G + G A K+V+ Y ++YP G + L++AL NI+
Sbjct: 424 GAYHGKFSFDAFSHKKAVL------YRSLFGDSAVRYPPYSRG---KLRLLKALVDSNIF 474
Query: 431 DRLRALVNV 439
D + L+ +
Sbjct: 475 DIFKVLLGL 483
|
Length = 484 |
| >gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Score = 151 bits (384), Expect = 9e-41
Identities = 103/361 (28%), Positives = 164/361 (45%), Gaps = 32/361 (8%)
Query: 48 HPLGVVGAIVSWNYPFH--NIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 105
PLGVV I +N+P PM A+ GN V+K SE + ++Q A
Sbjct: 135 QPLGVVAGITPFNFPAMIPLWMFPM--AIACGNTFVLKPSERVPGAAMRLAELLQEA--- 189
Query: 106 VGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK 163
G P+ +++V+ G E AL+ + + FVGS VG I A+ V G K
Sbjct: 190 -GLPDGVLNVVHGGKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAANGKRVQALGGAK 248
Query: 164 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 223
+ +V D D+ A V AA ++GQ C D ++ ++ + K + G
Sbjct: 249 NHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKLVERAKKLKVG 308
Query: 224 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF-PPTVIV 282
DMG + E+++ L+ +++GA+++ G G G + F PT++
Sbjct: 309 AGDDPGADMGPVISPAAKERIEGLIESGVEEGAKLVLDGR-GVKVPGYENGNFVGPTILD 367
Query: 283 NVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ 342
NV MK+ +EE FGP++ I++ +T +E + + N + YG G A+F+ S AR+ ++
Sbjct: 368 NVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAIINANPYGNGAAIFTRSGAAARKFQREVD 427
Query: 343 CGVAAIN--------DFASNYMCQSLPFGGVKDSGFG--RFAGVEGLRACCLVKSVVEDR 392
G+ IN F FGG K S FG F G +G+R K+V R
Sbjct: 428 AGMVGINVPIPVPLAFF---------SFGGWKGSFFGDLHFYGKDGVRFYTQTKTVTS-R 477
Query: 393 W 393
W
Sbjct: 478 W 478
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478 |
| >gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Score = 150 bits (382), Expect = 1e-40
Identities = 100/350 (28%), Positives = 156/350 (44%), Gaps = 46/350 (13%)
Query: 48 HPLGVVGAIVSWNYPFHNIF--NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 105
+PLGVVG I ++N+P ++ N +A V GN +V K S + +I+ L
Sbjct: 131 NPLGVVGVITAFNFPV-AVWGWNAAIALV-CGNVVVWKPSPTTPLTAIAVTKIVARVLEK 188
Query: 106 VGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK 163
G P + ++ G A+ GEALV V + F GS VGR + + + LELGG
Sbjct: 189 NGLPGAIASLVCGGADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVAARFGRSLLELGGN 248
Query: 164 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 223
+A IV +D D+ + + AA+ ++GQ C R VH IY + ++ K K V G
Sbjct: 249 NAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKKAYKQVRIG 308
Query: 224 PPLAGKYDMGALCLLEHSEKLQNLVNDALDK----GAEILARGSFGHLSEGAVDQYFPPT 279
PL +G L H++ + A+++ G +L FG Y PT
Sbjct: 309 DPLDDGTLVGPL----HTKAAVDNYLAAIEEAKSQGGTVL----FGGKVIDGPGNYVEPT 360
Query: 280 VIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREI-- 337
IV +++EE F PI+ ++KF+T EE + N+ GL ++F+ R
Sbjct: 361 -IVEGLSDAPIVKEETFAPILYVLKFDTLEEAIAWNNEVPQGLSSSIFTTDL---RNAFR 416
Query: 338 ---AAQIQCGVAAINDFASNYMCQSLP---------FGGVKDSGFGRFAG 375
CG+ +N + FGG K++G GR +G
Sbjct: 417 WLGPKGSDCGIVNVN----------IGTSGAEIGGAFGGEKETGGGRESG 456
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474 |
| >gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Score = 150 bits (379), Expect = 6e-40
Identities = 101/340 (29%), Positives = 161/340 (47%), Gaps = 22/340 (6%)
Query: 47 FHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 106
+ P GV I WN+PF + +A + +GN +V+K +E A + I++ A
Sbjct: 165 YTPTGVTVVISPWNFPFAIMVGMTVAPIVTGNCVVLKPAEAAPVIAAKFVEILEEA---- 220
Query: 107 GAPENLVDVITGF-AETGEALVSSVDK--IIFVGSPGVGRMIMRNASKT------LTPVT 157
G P+ +V + G +E G+ LV I F GS VG I A+K L V
Sbjct: 221 GLPKGVVQFVPGSGSEVGDYLVDHPKTSLITFTGSREVGTRIFERAAKVQPGQKHLKRVI 280
Query: 158 LELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 217
E+GGKD IV +D D+ AQ A +A +GQ C+ R VH +Y V + +I
Sbjct: 281 AEMGGKDTVIVDEDADIELAAQSAFTSAFGFAGQKCSAGSRAVVHEKVYDEVVERFVEIT 340
Query: 218 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAE--ILARGSFGHLSEGAVDQY 275
+S+ GPP + +G + +K N + + ++ G L G G S+G +
Sbjct: 341 ESLKVGPPDSADVYVGPVI----DQKSFNKIMEYIEIGKAEGRLVSGGCGDDSKG---YF 393
Query: 276 FPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAR 335
PT+ +V+ +L QEE FGP++ ++ + +E +++AN++ YGL V S ++
Sbjct: 394 IGPTIFADVDRKARLAQEEIFGPVVAFIRASDFDEALEIANNTEYGLTGGVISNNRDHIN 453
Query: 336 EIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG 375
A+ + G N + + PFGG K SG AG
Sbjct: 454 RAKAEFEVGNLYFNRNITGAIVGYQPFGGFKMSGTDSKAG 493
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511 |
| >gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 142 bits (360), Expect = 2e-37
Identities = 107/375 (28%), Positives = 172/375 (45%), Gaps = 24/375 (6%)
Query: 19 LLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGN 78
+L EG+ + + + R+ +K+ PLGVV AI +NYP + + + A+ +GN
Sbjct: 131 ILGEGKFLVSDSFPGNERNKYCLTSKI---PLGVVLAIPPFNYPVNLAVSKIAPALIAGN 187
Query: 79 GIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIF 135
+V+K + + ++ A G P+ L+ +TG +E G+ L V+ I F
Sbjct: 188 AVVLKPPTQGAVAA---LHMVHCFHLA-GFPKGLISCVTGKGSEIGDFLTMHPGVNCISF 243
Query: 136 VGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAG 195
G G I + A + P+ +ELGGKDA IV +D D+ A ++ SGQ C
Sbjct: 244 TGGD-TGIAISKKAG--MVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTA 300
Query: 196 AERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKG 255
+ V + V +V V ++ GPP D+ + + ++ LV DA +KG
Sbjct: 301 VKVVLVMESVADALVEKVNAKVAKLTVGPP-EDDCDITPVVSESSANFIEGLVMDAKEKG 359
Query: 256 AEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLA 315
A P ++ NV M++ EE FGP++P+++ N+ EE +
Sbjct: 360 ATF-------CQEWKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHC 412
Query: 316 NDSRYGL-GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFA 374
N S +GL GC VF+ ++A I+ ++ G IN A PF G+KDSG G
Sbjct: 413 NASNFGLQGC-VFTRDINKAILISDAMETGTVQINS-APARGPDHFPFQGLKDSGIGSQG 470
Query: 375 GVEGLRACCLVKSVV 389
+ VKS V
Sbjct: 471 ITNSINMMTKVKSTV 485
|
Length = 496 |
| >gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Score = 140 bits (353), Expect = 2e-36
Identities = 92/340 (27%), Positives = 150/340 (44%), Gaps = 20/340 (5%)
Query: 47 FHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 106
+ LG I WN+P ++A V GN ++ K +E+A G F I A
Sbjct: 152 YVGLGAGVVISPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDAVVVGYKVFEIFHEA---- 207
Query: 107 GAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASK------TLTPVT 157
G P +V + G E G L + I F GS G+ I A++ +
Sbjct: 208 GFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEAAARLAPGQTWFKRLY 267
Query: 158 LELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 217
+E GGK+A IV + D V + V +A GQ C+ A R + + Y + ++ K
Sbjct: 268 VETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAYEPVLERLLKRA 327
Query: 218 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFP 277
+ +S GPP D+G + E K+ + + ++G +++ G EG +
Sbjct: 328 ERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGK---RLEG-EGYFVA 382
Query: 278 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDE--EVVKLANDSRYGLGCAVFSGSQHRAR 335
PTV+ V ++ QEE FGP++ ++++ D+ E +++AN + YGL V+S +
Sbjct: 383 PTVVEEVPPKARIAQEEIFGPVLSVIRYKDDDFAEALEVANSTPYGLTGGVYSRKREHLE 442
Query: 336 EIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG 375
E + G IN + + PFGG K SG G
Sbjct: 443 EARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNAKTG 482
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 136 bits (344), Expect = 4e-36
Identities = 47/112 (41%), Positives = 68/112 (60%), Gaps = 1/112 (0%)
Query: 279 TVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIA 338
TV+V+V+ M + QEE FGP++P+++F +EE + LAND+ YGL VF+ +RA +A
Sbjct: 257 TVLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVA 316
Query: 339 AQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 390
+++ G IND + PFGGVK+SG GR G GL K+VV
Sbjct: 317 ERLRAGTVYINDSSIGVG-PEAPFGGVKNSGIGREGGPYGLEEYTRTKTVVI 367
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Score = 136 bits (346), Expect = 2e-35
Identities = 89/345 (25%), Positives = 149/345 (43%), Gaps = 29/345 (8%)
Query: 44 KVEFHPLGVVGAIVSWNYPFHNIF-NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAA 102
+E H GV I WN+P IF + AA+ +GN ++ K +E R ++
Sbjct: 162 GLELHGRGVFVCISPWNFPL-AIFTGQIAAALAAGNTVIAKPAEQTPLIAA---RAVELL 217
Query: 103 LAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMR---NASKTLTPV 156
A G P +++ ++ G E GEALV+ +D +IF GS ++I R + P+
Sbjct: 218 HEA-GVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAERDGPILPL 276
Query: 157 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 216
E GGK+A IV + V++A S+GQ C+ Y+ +I F+ +
Sbjct: 277 IAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIAERFIEMLKGA 336
Query: 217 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ-- 274
+ S+ G P D+G L + L+ L RG ++ +D
Sbjct: 337 MASLKVGDPWDLSTDVGPLIDKPAGKLLRAHTE---------LMRGEAWLIAPAPLDDGN 387
Query: 275 --YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD--EEVVKLANDSRYGLGCAVFSGS 330
+ P +I V + + E FGPI+ +++F + +E ++ N + YGL + S
Sbjct: 388 GYFVAPGIIEIVG--IFDLTTEVFGPILHVIRFKAEDLDEAIEDINATGYGLTLGIHSRD 445
Query: 331 QHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG 375
+ +++ G IN + + PFGG SG G AG
Sbjct: 446 EREIEYWRERVEAGNLYINRNITGAIVGRQPFGGWGLSGTGPKAG 490
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518 |
| >gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Score = 123 bits (311), Expect = 1e-30
Identities = 99/337 (29%), Positives = 157/337 (46%), Gaps = 18/337 (5%)
Query: 47 FHPLGVVGAIVSWNYPFHNI-FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 105
++PLG+VG I ++N+P + +N +A V GN +V K + +++ L
Sbjct: 152 WNPLGIVGVITAFNFPCAVLGWNACIALV-CGNCVVWKGAPTTPLITIAMTKLVAEVLEK 210
Query: 106 VGAPENLVDVITGFAETGEALV--SSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK 163
P + G AE GEA+ + + + F GS VG M+ + + LEL G
Sbjct: 211 NNLPGAIFTSFCGGAEIGEAIAKDTRIPLVSFTGSSKVGLMVQQTVNARFGKCLLELSGN 270
Query: 164 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 223
+A IV DD D+ + + AA+ ++GQ C R +H IY + Q+ + K V G
Sbjct: 271 NAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLEQLLTVYKQVKIG 330
Query: 224 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVN 283
PL +G L E + + + +G +IL GS SEG + PT IV
Sbjct: 331 DPLEKGTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIE-SEG---NFVQPT-IVE 385
Query: 284 VNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI-- 341
++ +++EE FGP++ +MKF T EE +++ N GL ++F+ I I
Sbjct: 386 ISPDADVVKEELFGPVLYVMKFKTLEEAIEINNSVPQGLSSSIFT---RNPETIFKWIGP 442
Query: 342 ---QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG 375
CG+ +N +N FGG K +G GR AG
Sbjct: 443 LGSDCGIVNVN-IPTNGAEIGGAFGGEKATGGGREAG 478
|
Length = 508 |
| >gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 122 bits (308), Expect = 2e-30
Identities = 102/364 (28%), Positives = 154/364 (42%), Gaps = 41/364 (11%)
Query: 49 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 108
PLGV I +N+P A+ GN V+K SE + + A GA
Sbjct: 136 PLGVCAGITPFNFPAMIPLWMFPIAIACGNTFVLKPSEKVPSAAVKLAELFSEA----GA 191
Query: 109 PENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 166
P+ +++V+ G E + L+ V + FVGS +GR I S V G K+
Sbjct: 192 PDGVLNVVHGDKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSAHGKRVQALGGAKNHM 251
Query: 167 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV-------KS 219
+V D D A V AA ++GQ C A+ V + V +
Sbjct: 252 VVMPDADKDAAADALVGAAYGAAGQRCMAIS--------AAVLVGAADEWVPEIRERAEK 303
Query: 220 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF-PP 278
+ GP +MG L + +++ +L+ +GAE+L G G+ +G + + P
Sbjct: 304 IRIGPGDDPGAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGR-GYKVDGYEEGNWVGP 362
Query: 279 TVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIA 338
T++ V TMK QEE FGP++ +++ +T EE + L N S YG G A+F+ AR
Sbjct: 363 TLLERVPPTMKAYQEEIFGPVLCVLEADTLEEAIALINASPYGNGTAIFTRDGAAARRFQ 422
Query: 339 AQIQCGVAAIN-------DFASNYMCQSLPFGGVKDSGFG--RFAGVEGLRACCLVKSVV 389
+I+ G +N + S F G KDS FG G +G K V
Sbjct: 423 HEIEVGQVGVNVPIPVPLPYFS--------FTGWKDSFFGDHHIYGKQGTHFYTRGK-TV 473
Query: 390 EDRW 393
RW
Sbjct: 474 TTRW 477
|
Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477 |
| >gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 117 bits (296), Expect = 9e-29
Identities = 83/337 (24%), Positives = 159/337 (47%), Gaps = 23/337 (6%)
Query: 42 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 101
A + P GVV +N+P H ++ A+ +GN +V K SE W ++ Q
Sbjct: 127 AAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAELTVKLWQQ 186
Query: 102 ALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRN-ASKTLTPVTL 158
A G P +++++ G ETG+AL + +D ++F GS G ++ R A + + L
Sbjct: 187 A----GLPAGVLNLVQGGRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQPEKILAL 242
Query: 159 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYA-LFVSQVAKIV 217
E+GG + ++ + D+ + +++A S+GQ C A R V + F++++ +
Sbjct: 243 EMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLARLVAVA 302
Query: 218 KSVSAGPPLAGKYD-MGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 276
K ++ G A MGA+ + ++ L L G + L +++
Sbjct: 303 KRLTVGRWDAEPQPFMGAVISEQAAQGLVAAQAQLLALGGKSLL-----EMTQLQAGTGL 357
Query: 277 PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRARE 336
I++V +L EE FGP++ +++++ +E ++LAN++R+GL + S + +
Sbjct: 358 LTPGIIDVTGVAELPDEEYFGPLLQVVRYDDFDEAIRLANNTRFGLSAGLLSDDREDYDQ 417
Query: 337 IAAQIQCGVA----AINDFASNYMCQSLPFGGVKDSG 369
+I+ G+ + +S + PFGGV SG
Sbjct: 418 FLLEIRAGIVNWNKPLTGASS-----AAPFGGVGASG 449
|
Length = 487 |
| >gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 115 bits (289), Expect = 6e-28
Identities = 83/328 (25%), Positives = 146/328 (44%), Gaps = 20/328 (6%)
Query: 49 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 108
P+GVV AI ++N+P + I + + A+ +G +++K + S + ++ A G
Sbjct: 124 PIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATPLSCLAFVDLLHEA----GL 179
Query: 109 PENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 166
PE + E LV+ V F+GS VG M+ + T LE GG
Sbjct: 180 PEGWCQAVPCENAVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAPG-TRCALEHGGAAPV 238
Query: 167 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 226
IV D+ + V+ +GQ C +R +V +I F ++A + + G P
Sbjct: 239 IVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDPT 298
Query: 227 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNH 286
++G L ++++ VN+A+ GA +L G LS D + PTV+++
Sbjct: 299 DPDTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGK--RLS----DTTYAPTVLLDPPR 352
Query: 287 TMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVA 346
K+ +E FGP++ + ++ +E + AN AVF+ A + ++
Sbjct: 353 DAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDLDVALKAVRRLDATAV 412
Query: 347 AIND---FASNYMCQSLPFGGVKDSGFG 371
+ND F ++M PF G + SG+G
Sbjct: 413 MVNDHTAFRVDWM----PFAGRRQSGYG 436
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455 |
| >gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 112 bits (281), Expect = 9e-27
Identities = 89/348 (25%), Positives = 155/348 (44%), Gaps = 45/348 (12%)
Query: 42 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 101
+A + P GVV +N+P H ++ A+ +GN +V K SE W ++ +
Sbjct: 125 RAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAEETVKLWEK 184
Query: 102 ALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNAS----KTLTP 155
A G P +++++ G ETG AL + +D ++F GS G ++ R + K L
Sbjct: 185 A----GLPAGVLNLVQGARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRPEKILA- 239
Query: 156 VTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD-----IYALFV 210
LE+GG + IV + D+ + +++A S+GQ C A R V A V
Sbjct: 240 --LEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLARLV 297
Query: 211 SQVAKIVKSVSAGPPLAGKYD------MGALCLLEHSEKLQNLVNDALDKGAEILARGSF 264
++ G +D MGA+ L+ +++L L G + L
Sbjct: 298 EVAERLT---------VGAWDAEPQPFMGAVISLQAAQRLLAAQAKLLALGGKSLLA--M 346
Query: 265 GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGC 324
L GA I++V +L EE FGP++ +++++ +E + +AN++R+GL
Sbjct: 347 RQLDPGAA---LLTPGIIDVTGVAELPDEEHFGPLLQVIRYDDFDEAIAIANNTRFGLSA 403
Query: 325 AVFSGSQHRAREIAAQIQCGVAAIN---DFASNYMCQSLPFGGVKDSG 369
+ S + +I+ G+ N AS+ + PFGG+ SG
Sbjct: 404 GLLSDDRELYDRFLLEIRAGIVNWNKPLTGASS----AAPFGGIGASG 447
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484 |
| >gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 6e-23
Identities = 83/335 (24%), Positives = 140/335 (41%), Gaps = 15/335 (4%)
Query: 49 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 108
GV I WN+P + AA+ +GN ++ K +E S ++Q A G
Sbjct: 160 SRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYRAVELMQEA----GF 215
Query: 109 PENLVDVITGFAET-GEALVS--SVDKIIFVGSPGVGRMIMRN-ASKTLTPVTL--ELGG 162
P + ++ G G AL S + + F GS V ++I + A + PV L E GG
Sbjct: 216 PAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQREDAPVPLIAETGG 275
Query: 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 222
++A IV V + +R+A S+GQ C+ V D+ ++ + ++ +
Sbjct: 276 QNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLTMIQGAMQELKV 335
Query: 223 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIV 282
G P D+G + E + L + +I A+ + + PT+
Sbjct: 336 GVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKI-AQLTLDDSRACQHGTFVAPTLF- 393
Query: 283 NVNHTMKLMQEEAFGPIMPIMKFNTDE--EVVKLANDSRYGLGCAVFSGSQHRAREIAAQ 340
++ +L EE FGP++ ++++ E ++V N + YGL V S + R I
Sbjct: 394 ELDDIAEL-SEEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKH 452
Query: 341 IQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG 375
+ G +N + PFGG SG G AG
Sbjct: 453 ARVGNCYVNRNQVGAVVGVQPFGGQGLSGTGPKAG 487
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500 |
| >gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Score = 99.6 bits (249), Expect = 2e-22
Identities = 94/351 (26%), Positives = 158/351 (45%), Gaps = 43/351 (12%)
Query: 44 KVEFHPL-GVVGAIVSWNYPFHNI-FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 101
++E+ PL G V A+ +N F I N A GN ++ K S+ A S ++I++
Sbjct: 164 RLEYRPLEGFVYAVSPFN--FTAIGGNLAGAPALMGNVVLWKPSDTAVLSNYLVYKILEE 221
Query: 102 ALAAVGAPENLVDVITGFAET-GEALVSSVD--KIIFVGSPGVGRMIMRNAS------KT 152
A G P +++ + G G+ +++S + F GS + + + +T
Sbjct: 222 A----GLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSLWKQIGENLDRYRT 277
Query: 153 LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQ 212
+ E GGK+ +V DV + VR A + GQ C+ A R YV ++ +
Sbjct: 278 YPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLWPEVKER 337
Query: 213 VAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA-LDKGAEILARGSFGHLSEGA 271
+ + +K + G P MGA+ + ++++ ++ A D AEI+A G S G
Sbjct: 338 LLEELKEIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDD-SVG- 395
Query: 272 VDQYF-PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD--EEVVKLAND-SRYGLGCAVF 327
YF PTVI + KLM EE FGP++ + + EE ++L + S Y L A+F
Sbjct: 396 ---YFVEPTVIETTDPKHKLMTEEIFGPVLTVYVYPDSDFEETLELVDTTSPYALTGAIF 452
Query: 328 SGSQHRAREIAAQIQCGVAAINDFASNYM--CQSL-------PFGGVKDSG 369
A++ A I+ A+ + A N+ + PFGG + SG
Sbjct: 453 ------AQDRKA-IREATDALRNAAGNFYINDKPTGAVVGQQPFGGARASG 496
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522 |
| >gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Score = 99.1 bits (246), Expect = 4e-22
Identities = 79/306 (25%), Positives = 136/306 (44%), Gaps = 13/306 (4%)
Query: 49 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALA-AVG 107
PLGV I +N+P AV GN ++K SE + +I A LA G
Sbjct: 249 PLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGAS-----VILAELAMEAG 303
Query: 108 APENLVDVITGFAETGEALVSSVD--KIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 165
P+ +++++ G +T A+ D + FVGS G I A+ + +G K+
Sbjct: 304 LPDGVLNIVHGTNDTVNAICDDEDIRAVSFVGSNTAGMHIYARAAAKGKRIQSNMGAKNH 363
Query: 166 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDI--YALFVSQVAKIVKSVSAG 223
+V D ++ + A ++GQ C D + + + AK +K
Sbjct: 364 GLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGDAKSWEDKLVERAKALKVTCGS 423
Query: 224 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVN 283
P A D+G + + E++ L+ +D GA++L G + + PT++
Sbjct: 424 EPDA---DLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSG 480
Query: 284 VNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQC 343
V M+ +EE FGP++ M+ N+ +E + + N ++YG G A+F+ S AR+ I+
Sbjct: 481 VTPDMECYKEEIFGPVLVCMQANSFDEAISIINKNKYGNGAAIFTSSGAAARKFQMDIEA 540
Query: 344 GVAAIN 349
G IN
Sbjct: 541 GQIGIN 546
|
Length = 604 |
| >gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Score = 94.5 bits (235), Expect = 1e-20
Identities = 97/347 (27%), Positives = 152/347 (43%), Gaps = 34/347 (9%)
Query: 44 KVEFHPL-GVVGAIVSWNYPFHNIF-NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 101
+ E+ PL G V AI +N F I N A GN ++ K S+ A S RI++
Sbjct: 163 RTEYRPLEGFVYAISPFN--FTAIAGNLAGAPALMGNTVIWKPSDTAMLSNYLVMRILEE 220
Query: 102 ALAAVGAPENLVDVITG-FAETGEALVSSVD--KIIFVGSPGV----GRMIMRNASK--T 152
A G P +++ + G + +++ D I F GS + + +N +
Sbjct: 221 A----GLPPGVINFVPGDGPLVSDTVLADPDLAGIHFTGSTPTFKHLWKQVAQNLDRYHN 276
Query: 153 LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQ 212
+ E GGKD +V DV HV +R A + GQ C+ R YV ++ F +
Sbjct: 277 FPRIVGETGGKDFHVVHPSADVEHVVSGTIRGAFEYQGQKCSACSRLYVPHSLWPRFKGR 336
Query: 213 VAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGA--EILARGSFGHLSEG 270
+ + V G P MGA+ + K+ + A + ILA G + S G
Sbjct: 337 LLAELSRVKVGDPDDFGTFMGAVIDEKSFAKIVKYIEHAKSDPSALTILAGGKYDD-SVG 395
Query: 271 AVDQYF-PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD--EEVVKLA-NDSRYGLGCAV 326
YF PTV+ + + LM+EE FGP++ + + D +E++ L + + YGL AV
Sbjct: 396 ----YFVEPTVVESKDPQEPLMKEEIFGPVLTVYVYPDDKYKEILDLVDSTTSYGLTGAV 451
Query: 327 FSGSQHRAREIAAQIQCGVAA----INDFASNYMCQSLPFGGVKDSG 369
F ++ R + A AA IND + + PFGG + SG
Sbjct: 452 F--AKDRDAILEADKVLRFAAGNFYINDKPTGAVVGQQPFGGARASG 496
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532 |
| >gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 91.3 bits (227), Expect = 2e-19
Identities = 85/337 (25%), Positives = 144/337 (42%), Gaps = 21/337 (6%)
Query: 49 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 108
PLG V I WN+P + AA+ +GN ++ K +E R++ A G
Sbjct: 236 PLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQAVRLLHEA----GV 291
Query: 109 PENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRN-ASKTLTPVTL--ELGG 162
P ++ ++ G ET G AL + V ++F GS V R+I R A + P+ L E GG
Sbjct: 292 PPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQGRPIPLIAETGG 351
Query: 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 222
++A IV V + +A S+GQ C+ + D+ ++ + + +
Sbjct: 352 QNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQEDVADRILTMLKGAMAELRV 411
Query: 223 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIV 282
G P D+G + E ++ + KG + + L +G + PT+I
Sbjct: 412 GNPDRLTTDVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGT---FVAPTLIE 468
Query: 283 --NVNHTMKLMQEEAFGPIMPIMKFNTD--EEVVKLANDSRYGLGCAVFSGSQHRAREIA 338
N++ +Q E FGP++ ++++ D +EV+ N + YGL V + +
Sbjct: 469 LENLDE----LQREVFGPVLHVVRYKRDELDEVIDQINATGYGLTLGVHTRIDETIAHVT 524
Query: 339 AQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG 375
+ G +N + PFGG SG G AG
Sbjct: 525 ERAHAGNLYVNRNIVGAVVGVQPFGGEGLSGTGPKAG 561
|
Length = 769 |
| >gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 91.4 bits (228), Expect = 2e-19
Identities = 78/321 (24%), Positives = 140/321 (43%), Gaps = 37/321 (11%)
Query: 47 FHPLGVVGAIVSWNYPFHNIF-NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 105
H GV I WN+P IF + AA+ +GN ++ K +E ++ A
Sbjct: 682 LHGRGVFVCISPWNFPL-AIFLGQVAAALAAGNTVIAKPAEQTPLIA---AEAVKLLHEA 737
Query: 106 VGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRN-ASKTLTPVTL--E 159
G P++++ ++ G A G AL + + + F GS R+I R A++ V L E
Sbjct: 738 -GIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTLAARDGPIVPLIAE 796
Query: 160 LGGKDAFI---------VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFV 210
GG++A I V DDV V +A +S+GQ C+ +V DI +
Sbjct: 797 TGGQNAMIVDSTALPEQVVDDV---------VTSAFRSAGQRCSALRVLFVQEDIADRVI 847
Query: 211 SQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEG 270
+ + + G P D+G + E L + + + + A +LA+ L G
Sbjct: 848 EMLKGAMAELKVGDPRLLSTDVGPVIDAEAKANLDAHI-ERMKREARLLAQLP---LPAG 903
Query: 271 AVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDE--EVVKLANDSRYGLGCAVFS 328
+ +F ++ + ++ E FGPI+ ++++ + +V+ N + YGL + S
Sbjct: 904 TENGHFVAPTAFEIDS-ISQLEREVFGPILHVIRYKASDLDKVIDAINATGYGLTLGIHS 962
Query: 329 GSQHRAREIAAQIQCGVAAIN 349
+ A IA +++ G +N
Sbjct: 963 RIEETADRIADRVRVGNVYVN 983
|
Length = 1038 |
| >gnl|CDD|143403 cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Score = 75.7 bits (186), Expect = 8e-15
Identities = 59/297 (19%), Positives = 109/297 (36%), Gaps = 29/297 (9%)
Query: 30 EYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENAS 89
+ G ++ P G V I ++N+P + A+ GN +++K S
Sbjct: 84 NHLGQGLKQ---QSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVS 140
Query: 90 WSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMR 147
R++ A P V +I G +T +AL+ + ++F GS V +
Sbjct: 141 IVMQIMVRLLHYAGLL---PPEDVTLINGDGKTMQALLLHPNPKMVLFTGSSRVAEKLAL 197
Query: 148 NASKTLTPVTLELGGKDAFIVCDDVD-VPHVAQIAVRAALQSSGQNCAGAERFYVHRDIY 206
+A + + LEL G + ++ D V +VA V+ SGQ C +V +
Sbjct: 198 DAKQA--RIYLELAGFNWKVLGPDAQAVDYVAWQCVQDMTACSGQKCTAQSMLFVPEN-- 253
Query: 207 ALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA-LDKGAEILARGSFG 265
+V+ + A LA + L + ++ G+ +L G
Sbjct: 254 ----WSKTPLVEKLKA--LLARRKLEDLLLGPVQTFTTLAMIAHMENLLGSVLLFSGKEL 307
Query: 266 HLSE-----GAVDQYFPPTVIVN--VNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLA 315
GA + + T +L+ EE FGP ++++ D+ + L
Sbjct: 308 KNHSIPSIYGACVA--SALFVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLE 362
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. Length = 442 |
| >gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 76.4 bits (189), Expect = 1e-14
Identities = 92/358 (25%), Positives = 153/358 (42%), Gaps = 63/358 (17%)
Query: 49 PLGVVGAIVSWNYPFHNIFNPMLAAVF-SGNGIVIKVSENASWSGCFYFRIIQAALA--- 104
PLG V I WN+P IF +AA +GN ++ K +E +I AA A
Sbjct: 676 PLGPVVCISPWNFPL-AIFTGQIAAALVAGNTVLAKPAEQTP--------LI-AARAVRL 725
Query: 105 --AVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLT-PVTL 158
G P++ + ++ G T G ALV+ + ++F GS V R+I R +K PV L
Sbjct: 726 LHEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSGPPVPL 785
Query: 159 --ELGGKDAFIVCDDVDVP-HVAQIAVRAALQSSGQNCAGAER-FYVHRDIYALFVSQVA 214
E GG++A IV D +P V + +A S+GQ C+ A R + D+ ++ +
Sbjct: 786 IAETGGQNAMIV-DSSALPEQVVADVIASAFDSAGQRCS-ALRVLCLQEDVADRVLTMLK 843
Query: 215 KIVKSVSAGPPLAGKYDMG------AL-CLLEHSEKLQNLVNDALDKGAEILARGSFGHL 267
+ + G P D+G A + H E ++ ++ +
Sbjct: 844 GAMDELRIGDPWRLSTDVGPVIDAEAQANIEAHIEAMRAA--------GRLVHQLPLPAE 895
Query: 268 SEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDE--EVVKLANDSRYGLGCA 325
+E + PT+I ++ + ++ E FGP++ +++F DE V+ N + YGL
Sbjct: 896 TEKGT--FVAPTLI-EIDS-ISDLEREVFGPVLHVVRFKADELDRVIDDINATGYGLTFG 951
Query: 326 VFSGSQHRAREIAAQIQCG--------VAAINDFASNYMCQSLPFGGVKDSGFGRFAG 375
+ S + ++I+ G + A+ PFGG SG G AG
Sbjct: 952 LHSRIDETIAHVTSRIRAGNIYVNRNIIGAV--------VGVQPFGGEGLSGTGPKAG 1001
|
Length = 1208 |
| >gnl|CDD|131331 TIGR02278, PaaN-DH, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 64.5 bits (157), Expect = 5e-11
Identities = 58/243 (23%), Positives = 91/243 (37%), Gaps = 17/243 (6%)
Query: 109 PENLVDVITGFAETGEAL--VSSVDKIIFVGSPGVGRMIMR--NASKTLTPVTLELGGKD 164
PE + +I G A G+ L + D + F GS + N + E +
Sbjct: 201 PEGSLQLICGSA--GDLLDHLDHRDVVAFTGSAATADRLRAHPNVLERGIRFNAEADSLN 258
Query: 165 AFIVCDDV--DVPHVAQIA---VRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 219
A I+ +D D P A VR +GQ C R V + + + + +
Sbjct: 259 AAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLKALQARLAK 318
Query: 220 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPT 279
V G P DMG L LE ++ V L GAE+ G +GA +FPPT
Sbjct: 319 VVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGP--GRLDGA---FFPPT 373
Query: 280 VIVNVN-HTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIA 338
+++ + + EAFGP+ + E +LA L + + AR+
Sbjct: 374 LLLAEDPWAGAVHATEAFGPVATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFI 433
Query: 339 AQI 341
+
Sbjct: 434 LGL 436
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has domains which are members of the pfam00171 and pfam01575 families. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. Length = 663 |
| >gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 64.2 bits (157), Expect = 7e-11
Identities = 95/360 (26%), Positives = 156/360 (43%), Gaps = 62/360 (17%)
Query: 49 PLGVVGAIVSWNYPFHNIFNPMLAAVF-SGNGIVIKVSENASWSGCFYFRIIQAALAAVG 107
PLG V I WN+P IF +AA +GN ++ K +E RI+ A G
Sbjct: 768 PLGPVVCISPWNFPL-AIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRILLEA----G 822
Query: 108 APENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKTL------TPVTL 158
P +V ++ G ET G ALV+ V ++F GS V R++ RN + L P+
Sbjct: 823 VPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLAGRLDPQGRPIPLIA 882
Query: 159 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 218
E GG++A IV V + +A S+GQ C+ + D+ + K+++
Sbjct: 883 ETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDDV----ADRTLKMLR 938
Query: 219 SVSAGPPLAGKYDMGAL--CLLEHSEKLQNLVNDALDKGAE------ILARGSFGH---- 266
GA+ C + + ++L + +D A+ I A + G
Sbjct: 939 --------------GAMAECRMGNPDRLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQ 984
Query: 267 --LSEGAVDQ---YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDE--EVVKLANDSR 319
Q + PPT+I ++ +L + E FGP++ ++++N ++ E+++ N S
Sbjct: 985 AARENSEDWQSGTFVPPTLI-ELDSFDEL-KREVFGPVLHVVRYNRNQLDELIEQINASG 1042
Query: 320 YGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSL----PFGGVKDSGFGRFAG 375
YGL V + R E AQ+ N + + M ++ PFGG SG G AG
Sbjct: 1043 YGLTLGVHT----RIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAG 1098
|
Length = 1318 |
| >gnl|CDD|143444 cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Score = 57.1 bits (138), Expect = 1e-08
Identities = 66/275 (24%), Positives = 113/275 (41%), Gaps = 27/275 (9%)
Query: 49 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 108
P G V I +N+P ++ A+F GN ++KV S + R+ L G
Sbjct: 142 PYGPVAIITPFNFPLEIPALQLMGALFMGNKPLLKVDSKVSVVMEQFLRL----LHLCGM 197
Query: 109 PENLVDVITGFAETGEALVSSVD--KIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 166
P VD+I T ++ + +F GS V R A + V LE G D
Sbjct: 198 PATDVDLIHSDGPTMNKILLEANPRMTLFTGSSKVAE---RLALELHGKVKLEDAGFDWK 254
Query: 167 IVCDDV-DVPHVAQIAVRAALQSSGQNCAGAERFYVHRD-IYALFVSQVAKI-----VKS 219
I+ DV DV +VA + A SGQ C+ + H + + A + ++ + ++
Sbjct: 255 ILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQAGILDKLKALAEQRKLED 314
Query: 220 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS----FGHLSEGAVDQY 275
++ GP L + +L+H +KL + + G + L S +G AV
Sbjct: 315 LTIGPVLT--WTTER--ILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAV--- 367
Query: 276 FPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEE 310
F P + + +L+ E FGP + ++ ++
Sbjct: 368 FVPLEEIAIEENFELVTTEVFGPFQVVTEYKDEQL 402
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. Length = 489 |
| >gnl|CDD|143446 cd07128, ALDH_MaoC-N, N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Score = 54.6 bits (132), Expect = 5e-08
Identities = 49/223 (21%), Positives = 82/223 (36%), Gaps = 13/223 (5%)
Query: 131 DKIIFVGSPGVGRMIMRNAS--KTLTPVTLELGGKDAFIVCDDV--DVPHVAQIA---VR 183
D + F GS + + + E +A I+ D P R
Sbjct: 223 DVVAFTGSAATAAKLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAR 282
Query: 184 AALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEK 243
+GQ C R +V + + + V G P MG L E E
Sbjct: 283 EMTVKAGQKCTAIRRAFVPEARVDAVIEALKARLAKVVVGDPRLEGVRMGPLVSREQRED 342
Query: 244 LQNLVNDALDKGAEILARGSFGHLSEGAVDQ---YFPPTVIV--NVNHTMKLMQEEAFGP 298
++ V L AE++ G GA + +FPPT+++ + + + EAFGP
Sbjct: 343 VRAAV-ATLLAEAEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDAATAVHDVEAFGP 401
Query: 299 IMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 341
+ +M +++ E ++LA R L +V + ARE+
Sbjct: 402 VATLMPYDSLAEAIELAARGRGSLVASVVTNDPAFARELVLGA 444
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. Length = 513 |
| >gnl|CDD|143447 cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Score = 50.6 bits (122), Expect = 8e-07
Identities = 55/243 (22%), Positives = 84/243 (34%), Gaps = 48/243 (19%)
Query: 97 RIIQAALAAVGAPENLVDVITGF-AETGEALVSSVDKII----FVGSPGVGRMIMRNASK 151
R I+AAL A G P + ++ G E G ALV I F GS GR + A+
Sbjct: 155 RAIRAALRATGLPAGVFSLLQGGGREVGVALVK--HPAIKAVGFTGSRRGGRALFDAAAA 212
Query: 152 TLT--PVTLELGGKDAFIVCDDVDVPHVAQIA---VRAALQSSGQNC---------AGAE 197
P ELG + + IA V + +GQ C AG
Sbjct: 213 RPEPIPFYAELGSVNPVFILPGALAERGEAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPA 272
Query: 198 RFYVHRDIYALFVSQVAKIVKSVSAG----PPLAGKYDMGALCLLEHSEKLQNLVNDALD 253
F++ +A+ + + A P +A Y G L
Sbjct: 273 --------GDAFIAALAEALAAAPAQTMLTPGIAEAYRQGVEALAAA------------- 311
Query: 254 KGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVK 313
G +LA G+ A F + +QEE FGP +++++ E++
Sbjct: 312 PGVRVLAGGAAAEGGNQAAPTLFKVDAAAFLADP--ALQEEVFGPASLVVRYDDAAELLA 369
Query: 314 LAN 316
+A
Sbjct: 370 VAE 372
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. Length = 454 |
| >gnl|CDD|143440 cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Score = 44.8 bits (107), Expect = 6e-05
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 10/74 (13%)
Query: 49 PLGVVGAIVSWNYPFHN-----IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 103
P+GV+ A++ P N IF ++A + + N I+ A +I++ A
Sbjct: 95 PVGVIAALI----PSTNPTSTAIFKALIA-LKTRNAIIFSPHPRAKKCSIEAAKIMREAA 149
Query: 104 AAVGAPENLVDVIT 117
A GAPE L+ I
Sbjct: 150 VAAGAPEGLIQWIE 163
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. Length = 436 |
| >gnl|CDD|237016 PRK11903, PRK11903, aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 44.7 bits (106), Expect = 8e-05
Identities = 77/356 (21%), Positives = 135/356 (37%), Gaps = 36/356 (10%)
Query: 51 GVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 110
GV I ++N+P ++ A+ +G +++K + +W R+++ +AA P
Sbjct: 150 GVALFINAFNFPAWGLWEKAAPALLAGVPVIVKPATATAW---LTQRMVKDVVAAGILPA 206
Query: 111 NLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNAS--KTLTPVTLELGGKDAFIV 168
+ V+ G + + D + F GS ++ + + + V +E ++ ++
Sbjct: 207 GALSVVCGSSAGLLDHLQPFDVVSFTGSAETAAVLRSHPAVVQRSVRVNVEADSLNSALL 266
Query: 169 CDDVDVPHVAQIA------VRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 222
D P VR SGQ C R +V +Y +A + +
Sbjct: 267 GPD-AAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALYDAVAEALAARLAKTTV 325
Query: 223 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHL--SEGAVDQYFPPTV 280
G P MG L ++ + AL AE+L G L ++ AV PT+
Sbjct: 326 GNPRNDGVRMGPLVSRAQLAAVRAGL-AALRAQAEVLFDGGGFALVDADPAVAACVGPTL 384
Query: 281 IV--NVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIA 338
+ + + + E FGP+ ++ + + LA + L +V+S A
Sbjct: 385 LGASDPDAATAVHDVEVFGPVATLLPYRDAAHALALARRGQGSLVASVYSDDAAFLAAAA 444
Query: 339 AQ----------IQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVE---GLRA 381
+ I VAA++ N M QSL G GR G E GLRA
Sbjct: 445 LELADSHGRVHVISPDVAALHTGHGNVMPQSL------HGGPGRAGGGEELGGLRA 494
|
Length = 521 |
| >gnl|CDD|143439 cd07121, ALDH_EutE, Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Score = 44.5 bits (106), Expect = 8e-05
Identities = 37/135 (27%), Positives = 56/135 (41%), Gaps = 13/135 (9%)
Query: 23 GEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN---PMLAAVFSGNG 79
G + L S + VE+ P GV+GAI P I N MLAA GN
Sbjct: 75 GTEDLTTTAWSGDNGL----TLVEYAPFGVIGAITPSTNPTETIINNSISMLAA---GNA 127
Query: 80 IVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVI-TGFAETGEALVS--SVDKIIFV 136
+V A + +I A+A G P+NLV + ET L++ ++ ++
Sbjct: 128 VVFNPHPGAKKVSAYAVELINKAIAEAGGPDNLVVTVEEPTIETTNELMAHPDINLLVVT 187
Query: 137 GSPGVGRMIMRNASK 151
G P V + + + K
Sbjct: 188 GGPAVVKAALSSGKK 202
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. Length = 429 |
| >gnl|CDD|131341 TIGR02288, PaaN_2, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 42.6 bits (100), Expect = 4e-04
Identities = 42/184 (22%), Positives = 73/184 (39%), Gaps = 11/184 (5%)
Query: 26 WLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 85
W KP+ ++ + K + P G+ I +P N + + A++ +GN +++K
Sbjct: 173 WEKPQGKNDPLKL---KKRFTIVPRGIALVIGCSTFPTWNTYPGLFASLATGNPVLVKPH 229
Query: 86 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGE----ALVSSVDKIIFVGSPGV 141
A ++ + L G NLV + A +V I F GS
Sbjct: 230 PGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAF 289
Query: 142 GRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQ-IAVRAALQSSGQNCAGAERFY 200
G+ + +NA + V E G + I+ D + + +A +L SGQ C +
Sbjct: 290 GQWLEQNARQAQ--VYTEKAGVNTVIIESTDDYKAMLRNLAFSLSLY-SGQMCTTTQAIL 346
Query: 201 VHRD 204
V RD
Sbjct: 347 VPRD 350
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has a domain which is a member of the pfam00171 family. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. Length = 551 |
| >gnl|CDD|236931 PRK11563, PRK11563, bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 41.0 bits (97), Expect = 0.001
Identities = 44/168 (26%), Positives = 71/168 (42%), Gaps = 20/168 (11%)
Query: 190 GQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVN 249
GQ C R V R + + + + V G P MGAL LE E ++ V
Sbjct: 293 GQKCTAIRRAIVPRALVDAVIEALRARLAKVVVGDPRLEGVRMGALASLEQREDVREKV- 351
Query: 250 DALDKGAEILARGSFGHLSEGAVDQ---YFPPTVIVNVN-------HTMKLMQEEAFGPI 299
AL AEI+ G GA + +FPPT++ + H + EAFGP+
Sbjct: 352 AALLAAAEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDPLEAPAVHDV-----EAFGPV 406
Query: 300 MPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAA 347
+M ++ +E ++LA + L ++ + E+A ++ G A
Sbjct: 407 STLMPYDDLDEAIELAARGKGSLVASLVTAD----PEVARELVLGAAP 450
|
Length = 675 |
| >gnl|CDD|143400 cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Score = 40.3 bits (94), Expect = 0.002
Identities = 35/161 (21%), Positives = 63/161 (39%), Gaps = 7/161 (4%)
Query: 49 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 108
P+GVV +I P + L ++ + N I+ A ++ A A GA
Sbjct: 95 PIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAGA 154
Query: 109 PENLVDVITGFA-ETGEALV--SSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 165
PENL+ I + E + L+ + ++ G P V ++ A + P G
Sbjct: 155 PENLIGWIDNPSIELAQRLMKFPGIGLLLATGGPAV----VKAAYSSGKPAIGVGAGNTP 210
Query: 166 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIY 206
++ + D+ Q V++ +G CA + V +Y
Sbjct: 211 VVIDETADIKRAVQSIVKSKTFDNGVICASEQSVIVVDSVY 251
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. Length = 439 |
| >gnl|CDD|143445 cd07127, ALDH_PAD-PaaZ, Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 0.002
Identities = 83/373 (22%), Positives = 137/373 (36%), Gaps = 73/373 (19%)
Query: 26 WLKPEYRSSGRSMIHKKAKVEFH--PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIK 83
W KP+ + +M + F P GV I +P N + + A++ +GN +++K
Sbjct: 173 WEKPQGKHDPLAM-----EKTFTVVPRGVALVIGCSTFPTWNGYPGLFASLATGNPVIVK 227
Query: 84 VSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS-------SVDKIIFV 136
A ++ + LA G NLV + A+T E ++ V I F
Sbjct: 228 PHPAAILPLAITVQVAREVLAEAGFDPNLVTLA---ADTPEEPIAQTLATRPEVRIIDFT 284
Query: 137 GSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGA 196
GS G + NA + V E G + +V D+ + + + SGQ C
Sbjct: 285 GSNAFGDWLEANARQAQ--VYTEKAGVNTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTTP 342
Query: 197 ERFYVHRD---------IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNL 247
+ YV RD + + +A + + A P A +GA +Q+
Sbjct: 343 QNIYVPRDGIQTDDGRKSFDEVAADLAAAIDGLLADPARAAAL-LGA---------IQS- 391
Query: 248 VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQ----------EEAFG 297
D L + AE G SE FP + T L++ EE FG
Sbjct: 392 -PDTLARIAEARQLGEVLLASEAVAHPEFPDARV----RTPLLLKLDASDEAAYAEERFG 446
Query: 298 PIMPIMKFNTDEEVVKLANDS---RYGLGCAVFSGS-------QHRAREIAAQIQC---- 343
PI ++ ++ + ++LA +S + V+S Q A + +
Sbjct: 447 PIAFVVATDSTDHSIELARESVREHGAMTVGVYSTDPEVVERVQEAALDAGVALSINLTG 506
Query: 344 GV-----AAINDF 351
GV AA +DF
Sbjct: 507 GVFVNQSAAFSDF 519
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. Length = 549 |
| >gnl|CDD|237956 PRK15398, PRK15398, aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Score = 39.1 bits (92), Expect = 0.004
Identities = 33/113 (29%), Positives = 50/113 (44%), Gaps = 9/113 (7%)
Query: 45 VEFHPLGVVGAIVSWNYPFHNIFN---PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 101
+E+ P GV+GA+ P I N MLAA GN +V A ++
Sbjct: 125 IEYAPFGVIGAVTPSTNPTETIINNAISMLAA---GNSVVFSPHPGAKKVSLRAIELLNE 181
Query: 102 ALAAVGAPENLVDVI-TGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASK 151
A+ A G PENLV + ET + L+ + ++ G P V + M++ K
Sbjct: 182 AIVAAGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVVKAAMKSGKK 234
|
Length = 465 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 456 | |||
| KOG2456 | 477 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| PLN02174 | 484 | aldehyde dehydrogenase family 3 member H1 | 100.0 | |
| PTZ00381 | 493 | aldehyde dehydrogenase family protein; Provisional | 100.0 | |
| KOG2454 | 583 | consensus Betaine aldehyde dehydrogenase [Energy p | 100.0 | |
| COG1012 | 472 | PutA NAD-dependent aldehyde dehydrogenases [Energy | 100.0 | |
| PLN02419 | 604 | methylmalonate-semialdehyde dehydrogenase [acylati | 100.0 | |
| KOG2450 | 501 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| PRK11241 | 482 | gabD succinate-semialdehyde dehydrogenase I; Provi | 100.0 | |
| PLN02203 | 484 | aldehyde dehydrogenase | 100.0 | |
| KOG2451 | 503 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| PLN02766 | 501 | coniferyl-aldehyde dehydrogenase | 100.0 | |
| PRK13968 | 462 | putative succinate semialdehyde dehydrogenase; Pro | 100.0 | |
| PRK10090 | 409 | aldehyde dehydrogenase A; Provisional | 100.0 | |
| PRK09406 | 457 | gabD1 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| cd07140 | 486 | ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge | 100.0 | |
| TIGR03374 | 472 | ABALDH 1-pyrroline dehydrogenase. Members of this | 100.0 | |
| cd07101 | 454 | ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi | 100.0 | |
| cd07113 | 477 | ALDH_PADH_NahF Escherichia coli NAD+-dependent phe | 100.0 | |
| PLN02315 | 508 | aldehyde dehydrogenase family 7 member | 100.0 | |
| PLN02278 | 498 | succinic semialdehyde dehydrogenase | 100.0 | |
| cd07086 | 478 | ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip | 100.0 | |
| cd07130 | 474 | ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se | 100.0 | |
| cd07100 | 429 | ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi | 100.0 | |
| cd07099 | 453 | ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di | 100.0 | |
| PLN02466 | 538 | aldehyde dehydrogenase family 2 member | 100.0 | |
| PRK09407 | 524 | gabD2 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| TIGR03216 | 481 | OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy | 100.0 | |
| PRK13252 | 488 | betaine aldehyde dehydrogenase; Provisional | 100.0 | |
| cd07098 | 465 | ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and | 100.0 | |
| cd07136 | 449 | ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr | 100.0 | |
| cd07107 | 456 | ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde | 100.0 | |
| cd07117 | 475 | ALDH_StaphAldA1 Uncharacterized Staphylococcus aur | 100.0 | |
| cd07142 | 476 | ALDH_F2BC Arabidosis aldehyde dehydrogenase family | 100.0 | |
| TIGR01780 | 448 | SSADH succinate-semialdehyde dehydrogenase. SSADH | 100.0 | |
| PLN02467 | 503 | betaine aldehyde dehydrogenase | 100.0 | |
| cd07085 | 478 | ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog | 100.0 | |
| cd07559 | 480 | ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep | 100.0 | |
| cd07148 | 455 | ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si | 100.0 | |
| TIGR02299 | 488 | HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd | 100.0 | |
| cd07097 | 473 | ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent | 100.0 | |
| cd07110 | 456 | ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro | 100.0 | |
| cd07141 | 481 | ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro | 100.0 | |
| cd07133 | 434 | ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l | 100.0 | |
| cd07119 | 482 | ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be | 100.0 | |
| cd07120 | 455 | ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh | 100.0 | |
| cd07137 | 432 | ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m | 100.0 | |
| cd07145 | 456 | ALDH_LactADH_F420-Bios Methanocaldococcus jannasch | 100.0 | |
| cd07089 | 459 | ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric | 100.0 | |
| cd07151 | 465 | ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd | 100.0 | |
| cd07090 | 457 | ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty | 100.0 | |
| cd07144 | 484 | ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd | 100.0 | |
| cd07123 | 522 | ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate | 100.0 | |
| PRK13473 | 475 | gamma-aminobutyraldehyde dehydrogenase; Provisiona | 100.0 | |
| cd07109 | 454 | ALDH_AAS00426 Uncharacterized Saccharopolyspora sp | 100.0 | |
| cd07124 | 512 | ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl | 100.0 | |
| cd07143 | 481 | ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh | 100.0 | |
| cd07106 | 446 | ALDH_AldA-AAD23400 Streptomyces aureofaciens putat | 100.0 | |
| cd07139 | 471 | ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy | 100.0 | |
| cd07091 | 476 | ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families | 100.0 | |
| TIGR01237 | 511 | D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07118 | 454 | ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr | 100.0 | |
| TIGR03250 | 472 | PhnAcAld_DH putative phosphonoacetaldehyde dehydro | 100.0 | |
| cd07152 | 443 | ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen | 100.0 | |
| cd07102 | 452 | ALDH_EDX86601 Uncharacterized aldehyde dehydrogena | 100.0 | |
| cd07132 | 443 | ALDH_F3AB Aldehyde dehydrogenase family 3 members | 100.0 | |
| cd07116 | 479 | ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen | 100.0 | |
| cd07115 | 453 | ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy | 100.0 | |
| cd07131 | 478 | ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen | 100.0 | |
| TIGR01236 | 533 | D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07094 | 453 | ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende | 100.0 | |
| cd07083 | 500 | ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)- | 100.0 | |
| cd07112 | 462 | ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent | 100.0 | |
| TIGR01804 | 467 | BADH glycine betaine aldehyde dehydrogenase. Betai | 100.0 | |
| cd07150 | 451 | ALDH_VaniDH_like Pseudomonas putida vanillin dehyd | 100.0 | |
| cd07147 | 452 | ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1 | 100.0 | |
| PRK03137 | 514 | 1-pyrroline-5-carboxylate dehydrogenase; Provision | 100.0 | |
| PRK09847 | 494 | gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen | 100.0 | |
| PRK09457 | 487 | astD succinylglutamic semialdehyde dehydrogenase; | 100.0 | |
| cd07138 | 466 | ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac | 100.0 | |
| cd07088 | 468 | ALDH_LactADH-AldA Escherichia coli lactaldehyde de | 100.0 | |
| cd07108 | 457 | ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a | 100.0 | |
| PLN00412 | 496 | NADP-dependent glyceraldehyde-3-phosphate dehydrog | 100.0 | |
| cd07095 | 431 | ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde | 100.0 | |
| cd07134 | 433 | ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro | 100.0 | |
| cd07135 | 436 | ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde | 100.0 | |
| cd07104 | 431 | ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen | 100.0 | |
| cd07105 | 432 | ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l | 100.0 | |
| cd07128 | 513 | ALDH_MaoC-N N-terminal domain of the monoamine oxi | 100.0 | |
| cd07114 | 457 | ALDH_DhaS Uncharacterized Candidatus pelagibacter | 100.0 | |
| cd07092 | 450 | ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g | 100.0 | |
| TIGR01722 | 477 | MMSDH methylmalonic acid semialdehyde dehydrogenas | 100.0 | |
| PF00171 | 462 | Aldedh: Aldehyde dehydrogenase family; InterPro: I | 100.0 | |
| cd07146 | 451 | ALDH_PhpJ Streptomyces putative phosphonoformaldeh | 100.0 | |
| cd07125 | 518 | ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d | 100.0 | |
| cd07111 | 480 | ALDH_F16 Aldehyde dehydrogenase family 16A1-like. | 100.0 | |
| cd07093 | 455 | ALDH_F8_HMSADH Human aldehyde dehydrogenase family | 100.0 | |
| TIGR03240 | 484 | arg_catab_astD succinylglutamic semialdehyde dehyd | 100.0 | |
| TIGR02278 | 663 | PaaN-DH phenylacetic acid degradation protein paaN | 100.0 | |
| cd07149 | 453 | ALDH_y4uC Uncharacterized ALDH (y4uC) with similar | 100.0 | |
| cd07103 | 451 | ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald | 100.0 | |
| cd07082 | 473 | ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat | 100.0 | |
| PRK11563 | 675 | bifunctional aldehyde dehydrogenase/enoyl-CoA hydr | 100.0 | |
| PRK11903 | 521 | aldehyde dehydrogenase; Provisional | 100.0 | |
| cd07087 | 426 | ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl | 100.0 | |
| TIGR01238 | 500 | D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| PRK11904 | 1038 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07126 | 489 | ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de | 100.0 | |
| cd07129 | 454 | ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr | 100.0 | |
| cd07078 | 432 | ALDH NAD(P)+ dependent aldehyde dehydrogenase fami | 100.0 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 100.0 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07084 | 442 | ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent | 100.0 | |
| cd07121 | 429 | ALDH_EutE Ethanolamine utilization protein EutE-li | 100.0 | |
| PRK15398 | 465 | aldehyde dehydrogenase EutE; Provisional | 100.0 | |
| TIGR02288 | 551 | PaaN_2 phenylacetic acid degradation protein paaN. | 100.0 | |
| cd07127 | 549 | ALDH_PAD-PaaZ Phenylacetic acid degradation protei | 100.0 | |
| cd07079 | 406 | ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu | 100.0 | |
| cd07081 | 439 | ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh | 100.0 | |
| PRK00197 | 417 | proA gamma-glutamyl phosphate reductase; Provision | 100.0 | |
| PLN02418 | 718 | delta-1-pyrroline-5-carboxylate synthase | 100.0 | |
| PRK13805 | 862 | bifunctional acetaldehyde-CoA/alcohol dehydrogenas | 100.0 | |
| cd07122 | 436 | ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr | 100.0 | |
| TIGR02518 | 488 | EutH_ACDH acetaldehyde dehydrogenase (acetylating) | 100.0 | |
| cd07077 | 397 | ALDH-like NAD(P)+-dependent aldehyde dehydrogenase | 100.0 | |
| TIGR01092 | 715 | P5CS delta l-pyrroline-5-carboxylate synthetase. T | 100.0 | |
| TIGR00407 | 398 | proA gamma-glutamyl phosphate reductase. The prosi | 100.0 | |
| cd06534 | 367 | ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s | 100.0 | |
| KOG2452 | 881 | consensus Formyltetrahydrofolate dehydrogenase [Nu | 100.0 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 100.0 | |
| KOG2455 | 561 | consensus Delta-1-pyrroline-5-carboxylate dehydrog | 100.0 | |
| KOG2453 | 507 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| cd07080 | 422 | ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Ac | 100.0 | |
| COG0014 | 417 | ProA Gamma-glutamyl phosphate reductase [Amino aci | 99.97 | |
| KOG4165 | 433 | consensus Gamma-glutamyl phosphate reductase [Amin | 99.87 | |
| PF05893 | 399 | LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR0086 | 99.68 | |
| KOG2449 | 157 | consensus Methylmalonate semialdehyde dehydrogenas | 99.52 | |
| PF07368 | 215 | DUF1487: Protein of unknown function (DUF1487); In | 99.29 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 98.24 | |
| PRK13770 | 416 | histidinol dehydrogenase; Provisional | 97.53 | |
| PF00815 | 412 | Histidinol_dh: Histidinol dehydrogenase; InterPro: | 97.48 | |
| PLN02926 | 431 | histidinol dehydrogenase | 97.33 | |
| PRK12447 | 426 | histidinol dehydrogenase; Reviewed | 97.28 | |
| TIGR00069 | 393 | hisD histidinol dehydrogenase. This model describe | 97.26 | |
| PRK00877 | 425 | hisD bifunctional histidinal dehydrogenase/ histid | 97.2 | |
| COG0141 | 425 | HisD Histidinol dehydrogenase [Amino acid transpor | 96.96 | |
| cd06572 | 390 | Histidinol_dh Histidinol dehydrogenase, HisD, E.C | 96.75 | |
| PRK13769 | 368 | histidinol dehydrogenase; Provisional | 96.16 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 92.41 |
| >KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-97 Score=723.31 Aligned_cols=401 Identities=27% Similarity=0.472 Sum_probs=374.4
Q ss_pred hhhhHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEE
Q 012790 2 VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIV 81 (456)
Q Consensus 2 ~~~~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~Vv 81 (456)
+|+...|+..++++++|+.+++++|++++.++.+......+.+++.+|+|||++|+|||||+.+.+.++++||||||+||
T Consensus 57 ~es~~~Ev~~~~~~i~~~l~~L~~wv~~~~v~~~~~t~~dk~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VV 136 (477)
T KOG2456|consen 57 LESYLNEVGYVLNEIRYALENLPEWVKPEPVKKSFLTFLDKAYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVV 136 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhHHhccccccCcccccccCceeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEE
Confidence 46677899999999999999999999999888776666788999999999999999999999999999999999999999
Q ss_pred EecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh-ccCEEEecCCHHHHHHHHHHhhccCCcccccC
Q 012790 82 IKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 160 (456)
Q Consensus 82 lKps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~-~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lEl 160 (456)
+||||.+|.++.++++++.++ +|.++++||.|+.+...+|++ ++|+|+||||+.+|+.||.+|++|++||+|||
T Consensus 137 lKPSEls~n~a~~lakllp~Y-----ld~~~~~VV~Ggv~ETt~LL~~rfD~IfyTGsp~VgkIim~aAaKhLTPvtLEL 211 (477)
T KOG2456|consen 137 LKPSELSPNTAKLLAKLLPQY-----LDQDLIRVVNGGVPETTELLKQRFDHIFYTGSPRVGKIIMAAAAKHLTPVTLEL 211 (477)
T ss_pred echhhcChhHHHHHHHHHHHh-----cCcceEEEecCCCchHHHHHHhhccEEEecCCchHHHHHHHHHHhcCCcEEEEc
Confidence 999999999999999999988 799999999998877777887 99999999999999999999999999999999
Q ss_pred CCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHH
Q 012790 161 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 240 (456)
Q Consensus 161 gGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~ 240 (456)
|||||++|++|+|++.++++|+||++.|+||+|+|||+|+++.+++.+|+++++..+++++ |+...++.|+++|||..|
T Consensus 212 GGKsP~~vd~~~d~~ia~~RI~~gk~~N~GQtCvapDYiL~~k~~~~kli~alk~~l~eFY-G~n~~eS~d~sRiIn~~h 290 (477)
T KOG2456|consen 212 GGKSPCYVDKNCDLKIAARRIAWGKWMNSGQTCVAPDYILCSKSIQPKLIDALKSTLKEFY-GENPKESKDLSRIINQRH 290 (477)
T ss_pred CCCCCeeecCCcCHHHHHHHHHHHhhccCCCeeccCCeEEecHhhhHHHHHHHHHHHHHHh-CCCccccccHHHHhhHHH
Confidence 9999999999999999999999999999999999999999999999999999999999996 888889999999999999
Q ss_pred HHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCC
Q 012790 241 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRY 320 (456)
Q Consensus 241 ~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~ 320 (456)
++|+.+++++. .+++.||.. ++...|++|||+.|+++++++|+||+|||||||+.+.+++|+|+++|+.+.
T Consensus 291 f~Rl~~ll~~~----~kv~~Gg~~-----d~~d~~I~PTIL~DV~~~~p~M~eEIFGPiLPIi~v~~l~Eai~~In~~eK 361 (477)
T KOG2456|consen 291 FQRLSALLDET----GKVAIGGES-----DESDRYIAPTILLDVPEDSPVMQEEIFGPILPIITVQSLDEAINFINEREK 361 (477)
T ss_pred HHHHHHHhcCC----CceecCCcc-----chhhcccCCeEEecCCCCChhhhhhhccCccceeEhhhHHHHHHHHhcCCC
Confidence 99999998742 589999983 667789999999999999999999999999999999999999999999999
Q ss_pred CceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEcccccccccC
Q 012790 321 GLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTK 400 (456)
Q Consensus 321 gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~~~~~~~~~ 400 (456)
+|++|+||+|.+...++.+++++|.|.+||..+|.....+||||+|.||||+|||++||++|||.|+++.++++. .
T Consensus 362 PLa~Y~Fs~n~~~vkr~l~~tsSGgvt~ND~i~H~~~~~lPFGGVG~SGmG~YhGK~sFdTFSH~k~~l~rs~~~----d 437 (477)
T KOG2456|consen 362 PLALYIFSNNEKLVKRFLTETSSGGVTVNDVIMHVTLDSLPFGGVGESGMGRYHGKFSFDTFSHEKSCLLRSLGG----D 437 (477)
T ss_pred ceEEEEecCCHHHHHHHHHhccCCCeeecceEEEEEeeccCcCCcCccccccccccccccccccchhhhhccccc----c
Confidence 999999999999999999999999999999999988888999999999999999999999999999999888752 2
Q ss_pred CCCCCCCCC-CccHHHHHHHHH
Q 012790 401 IPKPIQYPV-AENGFEFQESLV 421 (456)
Q Consensus 401 ~~~~~~~p~-~~~~~~~~~~~~ 421 (456)
.-..+|||| +.++.++++.++
T Consensus 438 ~~~~~RYPP~S~~K~~~lr~~~ 459 (477)
T KOG2456|consen 438 KLLALRYPPYSPQKLTLLRFLL 459 (477)
T ss_pred hhhhhcCCCCChHHHHHHHHHH
Confidence 233589998 555666666554
|
|
| >PLN02174 aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-94 Score=749.93 Aligned_cols=409 Identities=27% Similarity=0.473 Sum_probs=370.0
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEE
Q 012790 3 DASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVI 82 (456)
Q Consensus 3 ~~~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~Vvl 82 (456)
|+...|+..+++.++|+++++++|++++.........+..++++++|+|||++|+|||||+.++++++++||++||+||+
T Consensus 66 ~a~~~Ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVl 145 (484)
T PLN02174 66 ESSVYEVSLLRNSIKLALKQLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVL 145 (484)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccCCcceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEE
Confidence 33446999999999999999999998655433222234467899999999999999999999999999999999999999
Q ss_pred ecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh-ccCEEEecCCHHHHHHHHHHhhccCCcccccCC
Q 012790 83 KVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 83 Kps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~-~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg 161 (456)
|||+.+|+++.++++++. + ++|+|++|+|+|+++.+..|++ ++|+|+||||+++|+.|++.|+++++|++||||
T Consensus 146 KPse~tp~~~~~l~~l~~----~-~lp~gvv~vv~G~~~~~~~l~~~~vd~V~FTGS~~~G~~I~~~aa~~l~~v~LELG 220 (484)
T PLN02174 146 KPSELAPASSALLAKLLE----Q-YLDSSAVRVVEGAVTETTALLEQKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELG 220 (484)
T ss_pred ECCCCCHHHHHHHHHHHH----H-hCCCCEEEEEECChHHHHHHhcccCCEEEEECChHHHHHHHHHHHhcCCcEEEecC
Confidence 999999999999998875 3 5999999999997777888888 999999999999999999999999999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHh-hCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAAL-QSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 240 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~-~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~ 240 (456)
||||+||++|||++.|++.+++++| .|+||+|+|++|||||++++|+|+++|+++++++++|+|.+ ++++||+++++|
T Consensus 221 Gk~p~iV~~dADl~~Aa~~i~~g~f~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~-~~~~Gpli~~~~ 299 (484)
T PLN02174 221 GKSPVVVDSDTDLKVTVRRIIAGKWGCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKNPME-SKDMSRIVNSTH 299 (484)
T ss_pred CCCeEEEcCCCCHHHHHHHHHHHHhhCCCCCCCCcCcEEEEeHHHHHHHHHHHHHHHHhhcCCCCcc-cCCcCCCCCHHH
Confidence 9999999999999999999999999 69999999999999999999999999999999999999987 789999999999
Q ss_pred HHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCC
Q 012790 241 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRY 320 (456)
Q Consensus 241 ~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~ 320 (456)
++++.++|+++ ++|+++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|
T Consensus 300 ~~~v~~~i~~a-~~ga~~~~GG~~-----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eai~~aN~~~~ 373 (484)
T PLN02174 300 FDRLSKLLDEK-EVSDKIVYGGEK-----DRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPK 373 (484)
T ss_pred HHHHHHHHHHH-HcCCEEEECCCc-----CCCCCEEEEEEEecCCCCChhhcCCcCCCeEEEecCCCHHHHHHHHhCCCC
Confidence 99999999998 789999999963 235899999999999999999999999999999999999999999999999
Q ss_pred CceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEcccccccccC
Q 012790 321 GLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTK 400 (456)
Q Consensus 321 gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~~~~~~~~~ 400 (456)
||++||||+|.++++++++++++|.|+||++..+...+.+||||+|+||+|++||.+||++||+.|+|+.++.+
T Consensus 374 gLaa~vft~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~~------ 447 (484)
T PLN02174 374 PLAAYLFTHNKKLKERFAATVSAGGIVVNDIAVHLALHTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYRSLF------ 447 (484)
T ss_pred CeEEEEEcCCHHHHHHHHHcCCcceEEECCCcCCCCCCCCCCCCcCccccCccchHHHHHHhcceEEEEECCcc------
Confidence 99999999999999999999999999999986654445689999999999999999999999999999987642
Q ss_pred CCCCCCCCCCc-cHHHHHHHHHHHHhcCcHHHHH
Q 012790 401 IPKPIQYPVAE-NGFEFQESLVEALYGLNIWDRL 433 (456)
Q Consensus 401 ~~~~~~~p~~~-~~~~~~~~~~~~~~~~~~~~~~ 433 (456)
...+++|||+. ++.++++.+++ ..|+++.
T Consensus 448 ~~~~~~~pp~~~~~~~~~~~~~~----~~~~~~~ 477 (484)
T PLN02174 448 GDSAVRYPPYSRGKLRLLKALVD----SNIFDIF 477 (484)
T ss_pred CcccccCCCCChHHHHHHHHHHh----hchhhhh
Confidence 35677888855 57777777765 3566554
|
|
| >PTZ00381 aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-90 Score=729.85 Aligned_cols=403 Identities=29% Similarity=0.473 Sum_probs=364.5
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEE
Q 012790 3 DASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVI 82 (456)
Q Consensus 3 ~~~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~Vvl 82 (456)
|+...|+..++++++|+++++++|++++....+....+.+++++++|+|||++|+|||||+.++++++++||++||+||+
T Consensus 63 ea~~~Ev~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIl 142 (493)
T PTZ00381 63 ETKMTEVLLTVAEIEHLLKHLDEYLKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVL 142 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcccCCccccCCCceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEE
Confidence 44457999999999999999999998765443322234568999999999999999999999999999999999999999
Q ss_pred ecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh-ccCEEEecCCHHHHHHHHHHhhccCCcccccCC
Q 012790 83 KVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 83 Kps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~-~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg 161 (456)
|||+.+|.++.++.+++.+ ++|+|++++|+|+.+.+..|++ .+|+|+||||+++|+.|+++|+++++|++||||
T Consensus 143 KPse~tp~t~~~l~~ll~~-----~lp~~~v~vv~g~~~~~~~l~~~~~d~i~FTGS~~vG~~V~~~aa~~l~pv~lElG 217 (493)
T PTZ00381 143 KPSELSPHTSKLMAKLLTK-----YLDPSYVRVIEGGVEVTTELLKEPFDHIFFTGSPRVGKLVMQAAAENLTPCTLELG 217 (493)
T ss_pred ECCccCHHHHHHHHHHHHH-----hCCcCEEEEecCCHHHHHHHHhCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEEcC
Confidence 9999999999999998764 3999999999997788889998 999999999999999999999999999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
||||+||++|||++.|++.|++++|.|+||+|+|++|+|||++++|+|+++|++.+++++ |++.++++++||+++++++
T Consensus 218 Gk~p~iV~~dAdl~~Aa~~i~~g~~~naGQ~C~A~~~vlV~~~i~d~f~~~l~~~~~~~~-g~~~~~~~~~gpli~~~~~ 296 (493)
T PTZ00381 218 GKSPVIVDKSCNLKVAARRIAWGKFLNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFF-GEDPKKSEDYSRIVNEFHT 296 (493)
T ss_pred CCCceEEcCCCCHHHHHHHHHHHHHhhcCCcCCCCCEEEEeHHHHHHHHHHHHHHHHHHh-CCCCccCCCcCCCCCHHHH
Confidence 999999999999999999999999999999999999999999999999999999999986 6666788999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCC
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 321 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~g 321 (456)
+++.+++++ +|+++++||.. +..++|++|||+.+++++|++++||+||||++|++|+|+||||+++|++++|
T Consensus 297 ~ri~~~i~~---~ga~~~~gG~~-----~~~~~~i~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~~n~~~~g 368 (493)
T PTZ00381 297 KRLAELIKD---HGGKVVYGGEV-----DIENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKP 368 (493)
T ss_pred HHHHHHHHh---CCCcEEECCCc-----CCCCCeEeeEEEecCCCCChHHhccccCCeEEEEeeCCHHHHHHHHhcCCCC
Confidence 999999963 68999999973 3467899999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEcccccccccCC
Q 012790 322 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKI 401 (456)
Q Consensus 322 L~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~~~~~~~~~~ 401 (456)
|++||||+|.+.++++++++++|.|+||+...+...+.+||||+|.||+|++||++||++||+.|+|+.+..+. ..
T Consensus 369 La~~vft~d~~~~~~~~~~~~sG~v~IN~~~~~~~~~~~PFGG~g~SG~G~~~G~~g~~~fs~~k~v~~~~~~~----~~ 444 (493)
T PTZ00381 369 LALYYFGEDKRHKELVLENTSSGAVVINDCVFHLLNPNLPFGGVGNSGMGAYHGKYGFDTFSHPKPVLNKSTGN----SF 444 (493)
T ss_pred ceEEEECCCHHHHHHHHHhCCcceEEECCccccccCCCCCCCCcCcccccccchHHHHHhccceeEEEEccccc----cC
Confidence 99999999999999999999999999999876666667999999999999999999999999999999886321 23
Q ss_pred CCCCCCCCCcc-HHHHHHHHHHH
Q 012790 402 PKPIQYPVAEN-GFEFQESLVEA 423 (456)
Q Consensus 402 ~~~~~~p~~~~-~~~~~~~~~~~ 423 (456)
+.+++|||+.. +.++++++++.
T Consensus 445 ~~~~~~pp~~~~~~~~~~~~~~~ 467 (493)
T PTZ00381 445 DLSLRYPPYTSFKSWVLSFLLKL 467 (493)
T ss_pred cccccCCCCChHHHHHHHHHHhc
Confidence 45678888544 55666666544
|
|
| >KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-89 Score=660.00 Aligned_cols=437 Identities=63% Similarity=1.052 Sum_probs=416.1
Q ss_pred ChhhhHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeE
Q 012790 1 MVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGI 80 (456)
Q Consensus 1 ~~~~~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~V 80 (456)
|.|++++||..+++.|.|...+.++|++|+.++....+..+.++++|+|+||++.|.|||||+...+.++++||.+||.+
T Consensus 140 mvDAs~GEIlvTlEKI~Wtl~~Ger~L~P~~Rpn~~~~~yKg~~v~yePLGVI~aiVsWNYPfHN~lgPiiaAlFsGNaI 219 (583)
T KOG2454|consen 140 MVDASLGEILVTLEKITWTLSEGERWLKPESRPNGRAMLYKGSRVEYEPLGVIGAIVSWNYPFHNILGPIIAALFSGNAI 219 (583)
T ss_pred hhhhhHhHHHHHHHHhhhhhhcchhhcCCcCCCchhheeeccceEEEeecceEEEeeecCCchhhhhhHHHHHHhcCCeE
Confidence 67899999999999999999999999999999988777788899999999999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccc
Q 012790 81 VIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTL 158 (456)
Q Consensus 81 vlKps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~l 158 (456)
|+|-||.+.+++....++++.+|+..|-|+++|+++++-++++++|++ .+++|.|.||+.+++.|++.|+++++||++
T Consensus 220 VvK~SE~~~WS~~fy~e~ir~~L~a~g~~p~LVq~itclpd~a~~ltSh~g~khitFiGSqpvak~i~~~AAk~LTPv~l 299 (583)
T KOG2454|consen 220 VVKVSEHASWSGCFYFEIIRAALAAVGAPPNLVQVITCLPDTAEALTSHSGVKHITFIGSQPVAKMIMRNAAKTLTPVTL 299 (583)
T ss_pred EEEeecceeeehhhHHHHHHHHHHHcCCCcchhheeecCcchHhHhhcCCCcceEEEecCcHHHHHHHHhhhhhcCcEEE
Confidence 999999999999999999999999999999999999999999999998 899999999999999999999999999999
Q ss_pred cCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCH
Q 012790 159 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLL 238 (456)
Q Consensus 159 ElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~ 238 (456)
|||||+|+||++|+|++..+.-+++|.|..+||+|+..+|++||+++||.|+..|.++++.++.|.|.....|||.|++.
T Consensus 300 ELGGKDafIi~dda~l~~v~si~mRGtfQSsGQNCiGiER~iv~k~~Yd~~i~~l~~rv~s~r~G~~~~~~vDMGAm~s~ 379 (583)
T KOG2454|consen 300 ELGGKDAFIICDDADLSHVASIAMRGTFQSSGQNCIGIERFIVHKDIYDAFIGQLTKRVKSVRAGPPLTGRVDMGAMCSQ 379 (583)
T ss_pred eecCcccEEEeccccHHHHHHHHHhhhhhhcCCcccceeEEEEecchHHHHHHHHHHHHHHHHcCCCccCccchhhhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcC
Q 012790 239 EHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDS 318 (456)
Q Consensus 239 ~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~ 318 (456)
+++|.++.+++||+++||+++.||.+..++.+..|.|++||+|.|++++|+|++||.||||++++++++.|++|+++|++
T Consensus 380 nrfdhLesLv~DAv~KGArl~~gGsrF~Hpkyp~g~YF~PTlLvdvt~eMKIaqeE~FgPI~~im~ak~~eh~i~lAN~s 459 (583)
T KOG2454|consen 380 NRFDHLESLVNDAVDKGARLAVGGSRFGHPKYPVGQYFPPTLLVDVTHEMKIAQEEAFGPIMPIMQAKTDEHVIKLANDS 459 (583)
T ss_pred cchHHHHHHHHHHHhhcchhhhcccccCCCCCCcccccCCeEEEecCchhhhHhhhccccchhhhhcCChHHHHhhccCC
Confidence 99999999999999999999999998888888999999999999999999999999999999999999999999999999
Q ss_pred CCCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEcccccccc
Q 012790 319 RYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIK 398 (456)
Q Consensus 319 ~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~~~~~~~ 398 (456)
++||+++||+.|+++++++++++++|.|.|||...++.++ +||||++.||+||+.|.+||+..++.|+|...++ ++..
T Consensus 460 ~fgLG~sVFg~dk~~c~y~a~~lqtG~vAiNDFasfY~cQ-lPFGG~k~SGyGrFaG~EGLrg~Cn~Ksv~yd~~-~~~~ 537 (583)
T KOG2454|consen 460 RFGLGCSVFGGDKHRCKYIASQLQTGVVAINDFASFYMCQ-LPFGGVKDSGYGRFAGIEGLRGCCNVKSVAYDRV-AENA 537 (583)
T ss_pred cccccceeccccHHHHHHHHhhhhccceeehhhhhhheec-cccCCccCCCccccccHHHHHHHhcccceeccch-hhhh
Confidence 9999999999999999999999999999999999999988 9999999999999999999999999999988876 3556
Q ss_pred cCCCCCCCCCCC--ccHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Q 012790 399 TKIPKPIQYPVA--ENGFEFQESLVEALYGLNIWDRLRALVNVL 440 (456)
Q Consensus 399 ~~~~~~~~~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (456)
|.+|.++.||.+ .+.|.+++.++.-.|. .|.+...++.++-
T Consensus 538 t~ip~aldypi~~s~kaW~fvrsli~~~y~-aw~~~~snv~~l~ 580 (583)
T KOG2454|consen 538 TEIPEALDYPIYGSLKAWDFVRSLIDVLYF-AWTDQSSNVSRLR 580 (583)
T ss_pred ccCCccccccCcChhhHHHHHHHHHHHHHH-hHhhhccHHHHHh
Confidence 778999999883 5689999999988886 4555555555543
|
|
| >COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-88 Score=706.83 Aligned_cols=374 Identities=36% Similarity=0.608 Sum_probs=348.4
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEe
Q 012790 4 ASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIK 83 (456)
Q Consensus 4 ~~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlK 83 (456)
++..|+..+++.++|+++.++++.... .+.+. ....+++++|+|||++|+|||||+++.++++++||++||+||+|
T Consensus 92 ea~~ei~~~~~~~~~~a~~~~~~~~~~-~~~~~---~~~~~~~~~P~GVv~~I~PwNfP~~~~~~k~apALaaGntVV~K 167 (472)
T COG1012 92 EARGEIARAADFIRYYAEEARRLEGET-IPTDK---GSKALVRREPLGVVGAITPWNFPLALAAWKLAPALAAGNTVVLK 167 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCc-cCCCC---CcceEEEeecceEEEEECCCCCHHHHHHhhHHHHHHcCCEEEEE
Confidence 345789999999999999999876654 33221 46789999999999999999999999999999999999999999
Q ss_pred cCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccC
Q 012790 84 VSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 160 (456)
Q Consensus 84 ps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lEl 160 (456)
||+.+|+++..+++++. ++|+|+|++|+|+|++ +.+++|++ +||+|+||||+++|+.|++.|++++||++|||
T Consensus 168 Pse~tp~sa~~l~~~~~----~aglP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt~~G~~i~~~Aa~~~k~~~lEL 243 (472)
T COG1012 168 PSEQTPLSALALAELAA----EAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAANLKPVTLEL 243 (472)
T ss_pred CcccCcHHHHHHHHHHH----HhCCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECChHHHHHHHHHHhhcCCcEEEEC
Confidence 99999999988888764 6889999999999965 68899998 89999999999999999999999999999999
Q ss_pred CCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhc-cccCCCCCCCCccccccCHH
Q 012790 161 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS-VSAGPPLAGKYDMGALCLLE 239 (456)
Q Consensus 161 gGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~-~~~g~~~~~~~~~gpli~~~ 239 (456)
|||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|.++ ++ +++||+.++.+++||+++++
T Consensus 244 GGk~p~IV~~dAdl~~Av~~~~~g~f~n~GQ~C~a~~R~~V~~~v~d~f~~~l~~~-~~~l~~Gd~~d~~t~~Gpli~~~ 322 (472)
T COG1012 244 GGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLVAR-AASLKVGDPLDPSTDLGPLISEE 322 (472)
T ss_pred CCCCCeEECCCCCHHHHHHHHHHHHHhCCCCCccCCeEEEEehhhHHHHHHHHHHH-HhcCCCCCCCCCCCccCCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999 66 99999889999999999999
Q ss_pred HHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCC
Q 012790 240 HSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSR 319 (456)
Q Consensus 240 ~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~ 319 (456)
|+++++++|++++++|+++++||.. .. |+|++|||+++++++|++++||+||||++|++|+|+||||+++|+++
T Consensus 323 ~~~~v~~~i~~a~~~G~~~~~Gg~~-----~~-g~~~~PTv~~~v~~~~~i~~eEiFGPVl~v~~~~~~dEAi~lAN~t~ 396 (472)
T COG1012 323 QLDRVEGYIEDAVAEGARLLAGGKR-----PG-GYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIELANDTE 396 (472)
T ss_pred HHHHHHHHHHHHHHcCCEEEeCCcC-----CC-CeEECCEEEecCCCCChhhhccccCCceEEEEeCCHHHHHHHHhCCC
Confidence 9999999999999999999999872 22 99999999999999999999999999999999999999999999999
Q ss_pred CCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEcc
Q 012790 320 YGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 320 ~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~ 392 (456)
|||++||||+|..++.++++++++|+|+||+...+.....+||||+|+||+|+++|.+++++|++.|++..+.
T Consensus 397 yGL~a~v~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~~~PFGG~k~SG~G~~~g~~~~~~~~~~k~v~~~~ 469 (472)
T COG1012 397 YGLAAAIFTRDLARAFRVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEEFTEVKTVTIKL 469 (472)
T ss_pred CCceEEEEcCCHHHHHHHHhcCCeeEEEECCCCCCCCCCCCCCCCcccccCCccchHHHHHHHhcceEEEEec
Confidence 9999999999999999999999999999999854445566899999999999999999999999999998764
|
|
| >PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-88 Score=715.80 Aligned_cols=379 Identities=22% Similarity=0.327 Sum_probs=347.9
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..||..+++.++|+++.++++.+... +.. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 208 a~~EV~~~i~~~~~~a~~a~~~~g~~~-~~~--~~~~~~~~~reP~GVV~~I~PwNfPl~l~~~~iapALaAGNtVVlKP 284 (604)
T PLN02419 208 SHGDIFRGLEVVEHACGMATLQMGEYL-PNV--SNGVDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKP 284 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCcc-ccc--CCCccceEEecCccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeC
Confidence 457999999999999999988765321 211 12345688999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgG 162 (456)
|+.+|+++.++++++ .++|+|+|++|+|+|+++.++.|+. +||+|+||||+.+|+.|+++|+++++|++|||||
T Consensus 285 Se~tp~ta~~l~~l~----~eAGlP~GvvnvV~G~~~~~~~L~~~~~Vd~V~FTGSt~vG~~I~~~Aa~~lk~v~LELGG 360 (604)
T PLN02419 285 SEKDPGASVILAELA----MEAGLPDGVLNIVHGTNDTVNAICDDEDIRAVSFVGSNTAGMHIYARAAAKGKRIQSNMGA 360 (604)
T ss_pred CCCCcHHHHHHHHHH----HHhCcCcceEEEEeCChHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHhccCCcEEEecCC
Confidence 999999998888775 4789999999999998788888886 9999999999999999999999999999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHH
Q 012790 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 242 (456)
Q Consensus 163 k~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~ 242 (456)
|||+||++|||++.|++.+++++|.|+||.|+|++|||||++ +|+|+++|.++++++++|+|.++++++||++++++++
T Consensus 361 knp~IV~~DADld~Aa~~iv~g~f~naGQ~C~A~~Rv~V~~~-~d~f~e~l~~~~~~l~vG~p~d~~t~~GPlis~~~~~ 439 (604)
T PLN02419 361 KNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGD-AKSWEDKLVERAKALKVTCGSEPDADLGPVISKQAKE 439 (604)
T ss_pred CCeEEEcCCCCHHHHHHHHHHHHHhhCCCCcCCCCEEEEeCc-HHHHHHHHHHHHHHhccCCCCCCCCCccCCCCHHHHH
Confidence 999999999999999999999999999999999999999999 8999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCc
Q 012790 243 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 322 (456)
Q Consensus 243 ~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL 322 (456)
++.++|++|+++|+++++||.....+....|+|++|||+.++++||.+++||+||||++|++|+|+||||+++|+++|||
T Consensus 440 ~v~~~i~~A~~~GAkvl~GG~~~~~~~~~~G~f~~PTVL~~v~~d~~i~~eEiFGPVl~V~~~~~~dEAI~laN~s~yGL 519 (604)
T PLN02419 440 RICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSFDEAISIINKNKYGN 519 (604)
T ss_pred HHHHHHHHHHhcCCEEEeCCccccCCCCCCCeEEeeEEEeCCCCCCHHHcCCCcCCEEEEEecCCHHHHHHHHhCCCCCc
Confidence 99999999999999999999742111124689999999999999999999999999999999999999999999999999
Q ss_pred eeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCC--CcchHHHHhccceeeEEEEcc
Q 012790 323 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG--RFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 323 ~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G--~~~g~~gl~~ft~~k~v~~~~ 392 (456)
++||||+|.++++++++++++|.|+||+.. +...+.+||||+|+||+| +++|++|+++||+.|+|+.+.
T Consensus 520 aasVfT~d~~~a~~~a~~l~aG~V~IN~~~-~~~~~~~PFGG~k~SG~G~~~~~G~~gl~~ft~~K~v~~~~ 590 (604)
T PLN02419 520 GAAIFTSSGAAARKFQMDIEAGQIGINVPI-PVPLPFFSFTGNKASFAGDLNFYGKAGVDFFTQIKLVTQKQ 590 (604)
T ss_pred EEEEECCCHHHHHHHHHhCCeeeEEEcCCC-CCCCCCCCcCCcCcCCCCCCcccHHHHHHHhhCeEEEEEcc
Confidence 999999999999999999999999999863 333456899999999999 899999999999999998765
|
|
| >KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-89 Score=684.31 Aligned_cols=375 Identities=31% Similarity=0.518 Sum_probs=348.6
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEe
Q 012790 4 ASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIK 83 (456)
Q Consensus 4 ~~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlK 83 (456)
+...||..+++.++|++..+++.. .+..++. ...-.|.+++|+|||+.|+|||||+.+..|+++|||++||+||+|
T Consensus 117 a~~~Dl~~~~~~~ry~ag~ad~~~-~~~~~~~---~~~~~yt~~eP~GV~G~I~pWN~Pllm~awKlaPALa~GNtvV~K 192 (501)
T KOG2450|consen 117 ALVSDLPPAIDCFRYYAGWADKIH-GSTIPTD---GEFFAYTRREPIGVCGQIIPWNFPLLMQAWKLAPALAAGNTVVLK 192 (501)
T ss_pred hhhcCchhhhhHHHhhccchhhcc-cccCCCC---CceEEEecCCcceeeeEeccCchHHHHHHHhhhhHHhhCcEEEec
Confidence 334799999999999999987762 1111211 234678999999999999999999999999999999999999999
Q ss_pred cCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhh-ccCCccccc
Q 012790 84 VSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNAS-KTLTPVTLE 159 (456)
Q Consensus 84 ps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa-~~~~pv~lE 159 (456)
|++++|+|+..++++++ +||+|+|++|+|+|.+ +.+.+|.+ +||+|.||||+.+|+.|+++++ .++|||+||
T Consensus 193 pae~tplsal~~~~l~~----eaG~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGSt~~G~~I~~aaa~~n~K~vtLE 268 (501)
T KOG2450|consen 193 PAEQTPLTALYLASLCK----EAGFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGSTPVGKEIMEAAAESNLKPVTLE 268 (501)
T ss_pred CCCCCCchHHHHHHHhH----HhcCCcceEEEccCCCchHHHHHhhCCCCceEEecCCCcchhHHhhhhhhcCCceeccc
Confidence 99999999999988875 6899999999999976 88999998 9999999999999999999998 459999999
Q ss_pred CCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhc-cccCCCCCCCCccccccCH
Q 012790 160 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS-VSAGPPLAGKYDMGALCLL 238 (456)
Q Consensus 160 lgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~-~~~g~~~~~~~~~gpli~~ 238 (456)
||||||.||++|||++.|++.+..+.|+|+||.|.+.+|+|||++|||+|+++++++.++ +++|||.++.+..||.+++
T Consensus 269 lGGKsp~Ivf~Dadld~av~~~~~~iF~nqGq~C~a~sR~~Vqe~iydefv~~~v~~a~~~~kvGdP~~~~~~qG~~i~~ 348 (501)
T KOG2450|consen 269 LGGKSPIIVFDDADLDLAVENAAFGIFFNQGQCCTAGSRVFVQESIYDEFVEKFVAAAKKKLKVGDPFDEGTEQGPQISK 348 (501)
T ss_pred cCCCCcceEecccchHHHHHHHHHHhhcccccccccCceeEEechHHHHHHHHHHHHHhcccccCCCCCcccccccccCH
Confidence 999999999999999999999999999999999999999999999999999999999966 9999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcC
Q 012790 239 EHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDS 318 (456)
Q Consensus 239 ~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~ 318 (456)
.|++|+.++|+.++++||++++||.+ ....|+|+.|||++++.++|.|++|||||||++|++|++.||+|+++|++
T Consensus 349 ~q~ekI~~yi~~~k~eGa~l~~gG~~----~g~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPVv~v~~F~t~eE~i~~AN~t 424 (501)
T KOG2450|consen 349 TQYEKILGYIESGKKEGATLLCGGVR----LGDKGYFIKPTVFTNVTDDMRIAKEEIFGPVVVVLKFKTEEEVIERANNT 424 (501)
T ss_pred HHHHHHHHHHHHHHhcCCEEEecCcc----cCCCceEECCeeccCCChhhhhhHhhccCceEEEEecCcHHHHHHHhcCC
Confidence 99999999999999999999999985 24689999999999999999999999999999999999999999999999
Q ss_pred CCCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEcc
Q 012790 319 RYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 319 ~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~ 392 (456)
+|||++.|||+|.+++.++++++++|+||||++... .+..||||+|+||+||+.|.++++.||+.|+|+.+-
T Consensus 425 ~yGLAa~V~t~dl~~a~~va~~l~aGtVwiN~y~~~--~~~~PfgG~K~SG~GRE~g~~~l~~ytevKtv~v~~ 496 (501)
T KOG2450|consen 425 TYGLAAGVFTKDLDKAHRVANALQAGTVWINCYNVF--DAQVPFGGFKMSGIGRELGEYGLEAYTEVKTVTVKL 496 (501)
T ss_pred cccceeeEeccChHHHHHHHHHhcCceEEEeccccc--cccCCccccccccCCccccHHHHhhcceeeEEEEeC
Confidence 999999999999999999999999999999998654 346899999999999999999999999999998753
|
|
| >PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-87 Score=705.18 Aligned_cols=373 Identities=29% Similarity=0.527 Sum_probs=343.3
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|++..+++..... .+.. ......+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 105 a~~ev~~~~~~~~~~a~~~~~~~g~~-~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKP 181 (482)
T PRK11241 105 AKGEISYAASFIEWFAEEGKRIYGDT-IPGH--QADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKP 181 (482)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcc-cccC--CCCceEEEEEeeceEEEEECCCcChHHHHHHHHHHHHHhCCEEEEEC
Confidence 45699999999999998887653221 1111 11234678999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg 161 (456)
|+.+|+++.++.+++. ++|+|+|++|+|+|++ +.++.|++ ++|.|+||||+++|++|++.++++++|++||||
T Consensus 182 s~~tp~~~~~l~~~~~----~aglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS~~~G~~i~~~aa~~l~~~~lElG 257 (482)
T PRK11241 182 ASQTPFSALALAELAI----RAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELG 257 (482)
T ss_pred CCCChHHHHHHHHHHH----HcCCCcccEEEEecCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECC
Confidence 9999999988877754 7899999999999965 67888987 799999999999999999999999999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||++++.++
T Consensus 258 Gknp~IV~~dADld~aa~~i~~~~f~~aGQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~ 337 (482)
T PRK11241 258 GNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLEKGVTIGPLIDEKAV 337 (482)
T ss_pred CCCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCC
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 321 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~g 321 (456)
++++++|++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 338 ~~v~~~i~~a~~~Ga~vl~GG~~~----~~~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~aN~s~~G 413 (482)
T PRK11241 338 AKVEEHIADALEKGARVVCGGKAH----ELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIAQANDTEFG 413 (482)
T ss_pred HHHHHHHHHHHhCCCEEEecCCCC----CCCCeEEeeEEEECCCCCChhhhCcCcCCEEEEEEeCCHHHHHHHhhCCCCC
Confidence 999999999999999999999731 2358999999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEE
Q 012790 322 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 390 (456)
Q Consensus 322 L~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~ 390 (456)
|++||||+|.++++++++++++|.|+||++... .+.+||||+|+||+|+++|.+|+++||+.|+|..
T Consensus 414 L~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~g~~~ft~~k~v~~ 480 (482)
T PRK11241 414 LAAYFYARDLSRVFRVGEALEYGIVGINTGIIS--NEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCI 480 (482)
T ss_pred ceEEEEcCCHHHHHHHHHHcCccEEEECCCCCC--CCCCCcCCccccccCcccHHHHHHHhhcceEEEE
Confidence 999999999999999999999999999987543 3358999999999999999999999999999864
|
|
| >PLN02203 aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-87 Score=698.64 Aligned_cols=399 Identities=30% Similarity=0.467 Sum_probs=361.2
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecC
Q 012790 6 LGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 85 (456)
Q Consensus 6 ~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps 85 (456)
..|+..+++.++|+++++++|.+++....+....+..+++.++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus 65 ~~Ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps 144 (484)
T PLN02203 65 RDEVGVLTKSANLALSNLKKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPS 144 (484)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccccCCcccCCceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECC
Confidence 46999999999999999999987542211111123567899999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh-ccCEEEecCCHHHHHHHHHHhhccCCcccccCCCcc
Q 012790 86 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD 164 (456)
Q Consensus 86 ~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~-~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgGk~ 164 (456)
+.+|+++.++.+++.+ ++|+|++|+|+|+.+.++.|+. .+|+|+||||+++|+.|++.|+++++|+++||||||
T Consensus 145 ~~tp~~~~~l~~~~~~-----~lP~gvv~vv~g~~~~~~~l~~~~vd~v~fTGS~~~G~~v~~~aa~~l~~v~lElGGkn 219 (484)
T PLN02203 145 ELAPATSAFLAANIPK-----YLDSKAVKVIEGGPAVGEQLLQHKWDKIFFTGSPRVGRIIMTAAAKHLTPVALELGGKC 219 (484)
T ss_pred CcChHHHHHHHHHHHH-----hCCcCEEEEEeCCHHHHHHHHhCCCCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCC
Confidence 9999999999888764 3999999999997788999998 999999999999999999999999999999999999
Q ss_pred eEEEcC---CCCHHHHHHHHHHHHhh-CCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHH
Q 012790 165 AFIVCD---DVDVPHVAQIAVRAALQ-SSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 240 (456)
Q Consensus 165 p~iV~~---daDl~~aa~~i~~~~~~-n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~ 240 (456)
|+||++ |||++.|++.+++++|. |+||.|+|++|+|||++++|+|+++|.++++++++|+|.++ +++||++++++
T Consensus 220 p~iV~~d~~daDl~~aa~~i~~~~f~~~aGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~p~~~-~~~Gpli~~~~ 298 (484)
T PLN02203 220 PCIVDSLSSSRDTKVAVNRIVGGKWGSCAGQACIAIDYVLVEERFAPILIELLKSTIKKFFGENPRES-KSMARILNKKH 298 (484)
T ss_pred eEEEccCCCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEcHHHHHHHHHHHHHHHHHhcCCCCCcC-CCcCCCCCHHH
Confidence 999997 69999999999999995 89999999999999999999999999999999999999875 68999999999
Q ss_pred HHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCC
Q 012790 241 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRY 320 (456)
Q Consensus 241 ~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~ 320 (456)
+++++++|++++++ +++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|
T Consensus 299 ~~~v~~~i~~a~~~-~~~~~gg~~-----~~~g~~i~PTvl~~v~~d~~i~~eE~FGPVl~v~~~~~~~eai~~aN~~~~ 372 (484)
T PLN02203 299 FQRLSNLLKDPRVA-ASIVHGGSI-----DEKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPK 372 (484)
T ss_pred HHHHHHHHHHHHhC-CeEEeCCCc-----CCCCCEEeeEEEecCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCC
Confidence 99999999999876 789999862 236899999999999999999999999999999999999999999999999
Q ss_pred CceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEcccccccccC
Q 012790 321 GLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTK 400 (456)
Q Consensus 321 gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~~~~~~~~~ 400 (456)
||++||||+|.++++++++++++|.|+||++..+...+.+||||+|+||+|+++|++|+++||+.|+|+.++. .
T Consensus 373 gL~a~vft~d~~~a~~~~~~l~~G~V~IN~~~~~~~~~~~PfGG~k~SG~Gr~~g~~~l~~ft~~k~v~~~~~------~ 446 (484)
T PLN02203 373 PLAIYAFTNNEKLKRRILSETSSGSVTFNDAIIQYACDSLPFGGVGESGFGRYHGKYSFDTFSHEKAVLRRSL------L 446 (484)
T ss_pred CceEEEEcCCHHHHHHHHHhCCcceEEECCcccccCCCCCCCCCcCcccCCccccHHHHHHhcceeEEEEcCc------c
Confidence 9999999999999999999999999999998655444568999999999999999999999999999988764 2
Q ss_pred CCCCCCCCC-CccHHHHHHHHHH
Q 012790 401 IPKPIQYPV-AENGFEFQESLVE 422 (456)
Q Consensus 401 ~~~~~~~p~-~~~~~~~~~~~~~ 422 (456)
...+++||| .+++.++++.+++
T Consensus 447 ~~~~~~~~p~~~~~~~~~~~~~~ 469 (484)
T PLN02203 447 TEFEFRYPPWNDFKLGFLRLVYR 469 (484)
T ss_pred CcccccCCCCChHHHHHHHHHHh
Confidence 355677877 4457777777766
|
|
| >KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-87 Score=645.99 Aligned_cols=378 Identities=34% Similarity=0.544 Sum_probs=352.1
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEe
Q 012790 4 ASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIK 83 (456)
Q Consensus 4 ~~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlK 83 (456)
++.+||......++||++.+++...+-. +. .....+..+.++|+||+++|+|||||..+...+..+||++||+||+|
T Consensus 117 eA~gEv~y~a~f~eWyAeEA~RvyGdii-~s--~~~~rr~i~ikQPvGV~alItPWNFP~AMItRK~gAALAaGCTvVvk 193 (503)
T KOG2451|consen 117 EAKGEVAYSAAFFEWYAEEARRVYGDII-PS--LNPNRRLIVIKQPVGVVALITPWNFPAAMITRKAGAALAAGCTVVVK 193 (503)
T ss_pred hccceeehhHHHHHHHHHHhhhhhcccc-CC--CCCCceEEEEeccceeEEEecCcCChHHHHHhHHHHHHhcCceEEEc
Confidence 4578999999999999999998776533 22 12346678899999999999999999999999999999999999999
Q ss_pred cCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCC---h-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCccc
Q 012790 84 VSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF---A-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVT 157 (456)
Q Consensus 84 ps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~---~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~ 157 (456)
||+.||+++..++++.. +||+|+|++|+|+++ . +.|++|+. .|.+|+||||+.+|+.++++++.++|+++
T Consensus 194 Ps~~TPlsaLala~lA~----~AGiP~Gv~NVit~~~~~a~eig~~lctsp~VrkisFTGST~VGKiL~~qsastvKkvs 269 (503)
T KOG2451|consen 194 PSEDTPLSALALAKLAE----EAGIPAGVLNVITADASNAAEIGKELCTSPDVRKISFTGSTNVGKILMAQSASTVKKVS 269 (503)
T ss_pred cCCCCchHHHHHHHHHH----HcCCCCcceEEEecCCCChHHHHHHhhcCCceeeEEeeccchHHHHHHHhhhhhhhhee
Confidence 99999999999998864 799999999999974 2 77999987 99999999999999999999999999999
Q ss_pred ccCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccC
Q 012790 158 LELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCL 237 (456)
Q Consensus 158 lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~ 237 (456)
+||||+.|.||++|||||.|++.....+|-|+||+|+++.|+|||++|||+|+.+|.++++++++||..++++..||+||
T Consensus 270 lELGGNAPfIVFddadld~Av~g~mA~KFr~~GQtCVcaNR~yVh~~iyD~Fv~~l~e~vkkl~vGdG~~~~tt~GpLIn 349 (503)
T KOG2451|consen 270 LELGGNAPFIVFDDADLDQAVEGAMACKFRNSGQTCVCANRVYVHDSIYDKFVSKLAEAVKKLKVGDGLDPGTTQGPLIN 349 (503)
T ss_pred hhhcCCCceEEecCcCHHHHHHHHHHhhhccCCceeEecceeEEehhhHHHHHHHHHHHHHheeccCCCCCCCccCCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhc
Q 012790 238 LEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAND 317 (456)
Q Consensus 238 ~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~ 317 (456)
+.+.++++.+++||+++|+++++||+... ...++|++|||+.+++.+|-+..||+|||+.+|++|+|.||+|+++|+
T Consensus 350 e~av~Kve~~v~DAvsKga~ii~GGk~~~---~lg~~fyePTvl~~V~~~m~~s~eEtFGPla~v~kFdteeEvi~~ANd 426 (503)
T KOG2451|consen 350 EKAVEKVEKHVEDAVSKGAKIILGGKERS---ELGPTFYEPTVLSNVTQNMLVSSEETFGPLASVFKFDTEEEVIEWAND 426 (503)
T ss_pred HHHHHHHHHHHHHHHhcCCeEEeCCeEcc---ccCCccccceEeecCCccceeeccccccccceeeeeCCHHHHHHHhcc
Confidence 99999999999999999999999999432 234589999999999999999999999999999999999999999999
Q ss_pred CCCCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEccc
Q 012790 318 SRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRW 393 (456)
Q Consensus 318 ~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~~ 393 (456)
++.||++|+||+|..+..+++++|++|+|.+|.-... ....||||+|+||+||+++++|+++|+..|.+++..+
T Consensus 427 t~vGLAgYvfs~~~s~~~rVae~LEvGmVGvNeglis--~~~~pFGGVKeSG~GREgskyGidey~~ik~icig~L 500 (503)
T KOG2451|consen 427 TRVGLAGYVFSNNLSRLFRVAEALEVGMVGVNEGLIS--DAEAPFGGVKESGFGREGSKYGIDEYLVIKYICIGTL 500 (503)
T ss_pred CccceeeEEeccCHHHHHHHHHHHhcceeecccceec--ccccCcCCccccccCccccccchhhhhhhheeeecCc
Confidence 9999999999999999999999999999999986544 3468999999999999999999999999999987654
|
|
| >PLN02766 coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-86 Score=696.77 Aligned_cols=373 Identities=32% Similarity=0.551 Sum_probs=344.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecC
Q 012790 6 LGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 85 (456)
Q Consensus 6 ~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps 85 (456)
..|+..+++.++|+++.++++... ..... .....+++++|+|||++|+|||||+.++++++++||++||+||+|||
T Consensus 119 ~~ev~~~~~~l~~~a~~~~~~~g~-~~~~~---~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs 194 (501)
T PLN02766 119 AVDIPAAAGLLRYYAGAADKIHGE-TLKMS---RQLQGYTLKEPIGVVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPA 194 (501)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCc-eeccC---CCceEEEEeccceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEeCC
Confidence 359999999999999998877542 21211 12356789999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhh-ccCCcccccCC
Q 012790 86 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNAS-KTLTPVTLELG 161 (456)
Q Consensus 86 ~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa-~~~~pv~lElg 161 (456)
+.+|.++.++.+++ .++|+|+|++|+|+|++ +.++.|++ ++|+|+||||+++|++|++.|+ ++++|+++|||
T Consensus 195 ~~tp~~~~~l~~~~----~~aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~l~~~~lElG 270 (501)
T PLN02766 195 EQTPLSALFYAHLA----KLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQAAATSNLKQVSLELG 270 (501)
T ss_pred CCchHHHHHHHHHH----HhcCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhhcCCCeEEEECC
Confidence 99999998888775 47899999999999965 67888887 8999999999999999999999 69999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||+++++++
T Consensus 271 Gknp~iV~~dADl~~Aa~~i~~g~f~n~GQ~C~a~~ri~V~~si~d~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~ 350 (501)
T PLN02766 271 GKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVKKLVEKAKDWVVGDPFDPRARQGPQVDKQQF 350 (501)
T ss_pred CCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCC
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 321 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~g 321 (456)
++++++|++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 351 ~~v~~~i~~a~~~Ga~v~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~deai~~aN~~~~G 426 (501)
T PLN02766 351 EKILSYIEHGKREGATLLTGGKPC----GDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVEEAIKKANNTKYG 426 (501)
T ss_pred HHHHHHHHHHHhCCCEEEeCCCcC----CCCCeEEeeEEEecCCCCChhhhCCccCceEEEEEeCCHHHHHHHHhCCCCC
Confidence 999999999999999999999732 2368999999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEcc
Q 012790 322 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 322 L~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~ 392 (456)
|++||||+|.++++++++++++|.|+||++.. ..+.+||||+|+||+|+++|++|+++||+.|+|+...
T Consensus 427 L~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~~ 495 (501)
T PLN02766 427 LAAGIVTKDLDVANTVSRSIRAGTIWVNCYFA--FDPDCPFGGYKMSGFGRDQGMDALDKYLQVKSVVTPL 495 (501)
T ss_pred ceEEEECCCHHHHHHHHHhCCcceEEECCCCC--CCCCCCcCCcccCcCCccchHHHHHHHhceEEEEEec
Confidence 99999999999999999999999999998653 2456899999999999999999999999999998754
|
|
| >PRK13968 putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-85 Score=689.43 Aligned_cols=374 Identities=29% Similarity=0.539 Sum_probs=345.6
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++++++|++++... ......+++++|+|||++|+|||||++++++++++||++||+||+||
T Consensus 86 a~~ev~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~ALaaGN~vv~KP 161 (462)
T PRK13968 86 ARAEVAKSANLCDWYAEHGPAMLKAEPTL----VENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKH 161 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCcccc----CCCceEEEEEeccceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEEC
Confidence 45799999999999999998887653221 12346789999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgG 162 (456)
|+.+|.++.++.+++ .++|+|+|++|+|+|+++.+..|+. ++|+|+||||+++|++|++.++++++|++|||||
T Consensus 162 s~~tp~~~~~l~~~~----~~aGlP~gv~~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~G~~i~~~aa~~l~~~~lElGG 237 (462)
T PRK13968 162 APNVMGCAQLIAQVF----KDAGIPQGVYGWLNADNDGVSQMINDSRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGG 237 (462)
T ss_pred CCcChHHHHHHHHHH----HHcCcCcCcEEEEecCchhhHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEecCC
Confidence 999999998877765 4799999999999987655555665 8999999999999999999999999999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHH
Q 012790 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 242 (456)
Q Consensus 163 k~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~ 242 (456)
|||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++++++
T Consensus 238 k~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~ 317 (462)
T PRK13968 238 SDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRD 317 (462)
T ss_pred CCceEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEECHhHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCc
Q 012790 243 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 322 (456)
Q Consensus 243 ~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL 322 (456)
++.+++++++.+|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||
T Consensus 318 ~~~~~i~~a~~~Ga~vl~gg~~~----~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~d~~eai~~~n~~~~gL 393 (462)
T PRK13968 318 ELHHQVEATLAEGARLLLGGEKI----AGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHALELANDSEFGL 393 (462)
T ss_pred HHHHHHHHHHHCCCEEEeCCCcC----CCCceEECCEEEeCCCCCChHHhCCCcCCEEEEEEECCHHHHHHHHhCCCCcc
Confidence 99999999999999999999742 22589999999999999999999999999999999999999999999999999
Q ss_pred eeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEcc
Q 012790 323 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 323 ~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~ 392 (456)
++||||+|.+.++++++++++|.|+||+... ..+.+||||+|+||+|+++|++||++||+.|+|+.++
T Consensus 394 s~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~~ 461 (462)
T PRK13968 394 SATIFTTDETQARQMAARLECGGVFINGYCA--SDARVAFGGVKKSGFGRELSHFGLHEFCNIQTVWKDR 461 (462)
T ss_pred eEEEEcCCHHHHHHHHHhCCcceEEECCCCC--CCCCCCCCCccccccCcCchHHHHHHhcceeEEEEec
Confidence 9999999999999999999999999998753 2456899999999999999999999999999997754
|
|
| >PRK10090 aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-85 Score=677.74 Aligned_cols=374 Identities=30% Similarity=0.490 Sum_probs=344.6
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++.++++..... ... ....+.+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 30 a~~Ev~~~~~~~~~~a~~~~~~~~~~~-~~~--~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKp 106 (409)
T PRK10090 30 AEVEVAFTADYIDYMAEWARRYEGEII-QSD--RPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKP 106 (409)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCccc-CCC--CCCceeEEEEecccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEEC
Confidence 457999999999999998877643211 111 11245789999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg 161 (456)
|+.+|.++.++++++. ++|+|+|++|+|+|++ +.+..|++ ++|+|+||||+.+|+.|+++++++++|+++|||
T Consensus 107 s~~~p~~~~~l~~~~~----~aglP~gv~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~v~~~aa~~~~~~~lElg 182 (409)
T PRK10090 107 SEFTPNNAIAFAKIVD----EIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMAAAAKNITKVCLELG 182 (409)
T ss_pred CCcChHHHHHHHHHHH----HcCCCcccEEEEeCCChhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHhcCCeEEEECC
Confidence 9999999998887764 7899999999999954 67888887 999999999999999999999999999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCC-CCccccccCHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAG-KYDMGALCLLEH 240 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~-~~~~gpli~~~~ 240 (456)
||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++ ++++||++++++
T Consensus 183 Gk~p~iV~~dADld~aa~~iv~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~G~p~~~~~~~~gpli~~~~ 262 (409)
T PRK10090 183 GKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAA 262 (409)
T ss_pred CCCeEEEcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCcccCccccccCHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999987 899999999999
Q ss_pred HHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCC
Q 012790 241 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRY 320 (456)
Q Consensus 241 ~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~ 320 (456)
+++++++|++++++|+++++||... +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|
T Consensus 263 ~~~~~~~i~~a~~~Ga~~~~gg~~~----~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~ 338 (409)
T PRK10090 263 LERVEQKVARAVEEGARVALGGKAV----EGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEEAIAMANDSDY 338 (409)
T ss_pred HHHHHHHHHHHHHCCCEEEeCCCcC----CCCCeEEecEEEeCCCCCCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCC
Confidence 9999999999999999999999742 235899999999999999999999999999999999999999999999999
Q ss_pred CceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEc
Q 012790 321 GLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 321 gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~ 391 (456)
||++||||+|.+.++++++++++|.|+||+...+.. ..||||+|+||+|+++|.+||++||+.|+++.+
T Consensus 339 gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~--~~pfGG~k~SG~G~~~g~~gl~~f~~~k~v~~~ 407 (409)
T PRK10090 339 GLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAM--QGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQ 407 (409)
T ss_pred CceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCC--CCCcCCcccccCCccchHHHHHHhcceEEEEEe
Confidence 999999999999999999999999999999765542 469999999999999999999999999998764
|
|
| >PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-85 Score=687.35 Aligned_cols=375 Identities=28% Similarity=0.517 Sum_probs=346.3
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++.+++|+..+...... ......+++++|+|||++|+|||||++++++++++||++||+||+||
T Consensus 80 a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~ALaaGN~VV~Kp 158 (457)
T PRK09406 80 AKAEALKCAKGFRYYAEHAEALLADEPADAAA-VGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKH 158 (457)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCccccccC-CCCceEEEEEecceeEEEECCccchHHHHHHHHHHHHHcCCEEEEEC
Confidence 45699999999999999999987654322111 12345689999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgG 162 (456)
|+.+|+++.++++++ .++|+|+|++++|+++.+.+..|+. ++|+|+||||+++|+.|++.+++++||+++||||
T Consensus 159 s~~~p~~~~~l~~l~----~~aGlP~gvv~~v~~g~~~~~~l~~~~~i~~V~fTGs~~~G~~i~~~a~~~~~~~~lElGG 234 (457)
T PRK09406 159 ASNVPQTALYLADLF----RRAGFPDGCFQTLLVGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGDEIKKTVLELGG 234 (457)
T ss_pred CCcCcHHHHHHHHHH----HHhCCCcCcEEEEcCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCCceeeecCC
Confidence 999999998888775 4789999999999875566778886 9999999999999999999999999999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHH
Q 012790 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 242 (456)
Q Consensus 163 k~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~ 242 (456)
|||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++
T Consensus 235 ~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~ 314 (457)
T PRK09406 235 SDPFIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRD 314 (457)
T ss_pred CCeeEECCCCCHHHHHHHHHHHHhhCCCCcccCCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCcCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCc
Q 012790 243 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 322 (456)
Q Consensus 243 ~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL 322 (456)
+++++|++++++|+++++||... +..|+|++|||+.+++++|.+++||+||||++|++|+|++|||+++|+++|||
T Consensus 315 ~~~~~i~~a~~~Ga~~l~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL 390 (457)
T PRK09406 315 EVEKQVDDAVAAGATILCGGKRP----DGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGL 390 (457)
T ss_pred HHHHHHHHHHHCCCEEEeCCCcC----CCCCceEccEEeecCCCCCHHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCc
Confidence 99999999999999999999742 23689999999999999999999999999999999999999999999999999
Q ss_pred eeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEE
Q 012790 323 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 390 (456)
Q Consensus 323 ~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~ 390 (456)
++||||+|.+.++++++++++|.|+||++... .+.+||||+|+||+|++||++++++||+.|+|..
T Consensus 391 ~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~ 456 (457)
T PRK09406 391 GSNAWTRDEAEQERFIDDLEAGQVFINGMTVS--YPELPFGGVKRSGYGRELSAHGIREFCNIKTVWI 456 (457)
T ss_pred eEEEEcCCHHHHHHHHHhCCcceEEECCCCCC--CCCCCCCCccccccCccchHHHHHHhhceEEEEe
Confidence 99999999999999999999999999997653 3468999999999999999999999999999864
|
|
| >cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-85 Score=689.19 Aligned_cols=374 Identities=28% Similarity=0.491 Sum_probs=341.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccc-cccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 6 LGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI-HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 6 ~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
..|+..+++.++|+++.++++... ..+...... ....+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 104 ~~ev~~~~~~l~~~a~~~~~~~g~-~~~~~~~~~~~~~~~~~r~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKP 182 (486)
T cd07140 104 KTHVGMSIQTFRYFAGWCDKIQGK-TIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVLKP 182 (486)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCc-cccccccCCCCceEEEEeeccceEEEEcCCchHHHHHHHHHHHHHHhCCEEEEEC
Confidence 469999999999999888765322 112110001 123578999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhc-cCCcccccC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASK-TLTPVTLEL 160 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~-~~~pv~lEl 160 (456)
|+.+|.++..+++++ .++|+|+|++|+|+|++ +.++.|+. ++|+|+||||+.+|+.|+++|++ +++|+++||
T Consensus 183 s~~tp~~~~~l~~~~----~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~l~~v~lEl 258 (486)
T cd07140 183 AQVTPLTALKFAELT----VKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMKSCAVSNLKKVSLEL 258 (486)
T ss_pred CccCcHHHHHHHHHH----HHcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCCeEEEEc
Confidence 999999998887765 47899999999999965 67888887 89999999999999999999996 999999999
Q ss_pred CCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHH
Q 012790 161 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 240 (456)
Q Consensus 161 gGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~ 240 (456)
|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||+++++|
T Consensus 259 GGk~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~i~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~ 338 (486)
T cd07140 259 GGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHDEFVRRVVEEVKKMKIGDPLDRSTDHGPQNHKAH 338 (486)
T ss_pred CCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhCCccCCCCCCCcCCCCcCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeC--CHHHHHHHHhcC
Q 012790 241 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN--TDEEVVKLANDS 318 (456)
Q Consensus 241 ~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~--~~~eai~~~n~~ 318 (456)
+++++++|++++++|+++++||... +..|+|++|||+.+++++|++++||+||||++|++|+ |++|||+++|++
T Consensus 339 ~~~v~~~i~~a~~~Ga~vl~gg~~~----~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~aN~~ 414 (486)
T cd07140 339 LDKLVEYCERGVKEGATLVYGGKQV----DRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGDVDGVLQRANDT 414 (486)
T ss_pred HHHHHHHHHHHHHCCCEEEeCCCCC----CCCCeeECCEEEeCCCCCChhhhCCCCCCeEEEEEcCCCCHHHHHHHHhCC
Confidence 9999999999999999999999742 2358999999999999999999999999999999998 699999999999
Q ss_pred CCCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEE
Q 012790 319 RYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 390 (456)
Q Consensus 319 ~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~ 390 (456)
+|||++||||+|.++++++++++++|.|+||++... .+.+||||+|+||+|+++|++||++||+.|+|+.
T Consensus 415 ~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~ 484 (486)
T cd07140 415 EYGLASGVFTKDINKALYVSDKLEAGTVFVNTYNKT--DVAAPFGGFKQSGFGKDLGEEALNEYLKTKTVTI 484 (486)
T ss_pred CcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCC--CCCCCcCCcccCcCCCcchHHHHHHhhcEEEEEE
Confidence 999999999999999999999999999999996442 3458999999999999999999999999999875
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. |
| >TIGR03374 ABALDH 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-85 Score=686.82 Aligned_cols=371 Identities=27% Similarity=0.474 Sum_probs=340.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecC
Q 012790 6 LGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 85 (456)
Q Consensus 6 ~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps 85 (456)
..|+..+++.++|+++.++.. .....+. .......+++++|+|||++|+|||||+.++++++++||++||+||+|||
T Consensus 97 ~~ev~~~~~~~~~~a~~~~~~-~~~~~~~--~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VV~KPs 173 (472)
T TIGR03374 97 NDEIPAIVDVFRFFAGAARCL-SGLAAGE--YLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPS 173 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHh-cCcccCc--cCCCceEEEEEecceEEEEECCCCchHHHHHHHHHHHHhcCCEEEecCC
Confidence 358999999999998877543 2221111 1123456899999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCC
Q 012790 86 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162 (456)
Q Consensus 86 ~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgG 162 (456)
+.+|.++..+++++.+ ++|+|++|+|+|++ +.++.|++ ++|+|+||||+++|+.|+++++++++|++|||||
T Consensus 174 ~~tp~~~~~l~~l~~~-----~lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~~~lElGG 248 (472)
T TIGR03374 174 EITPLTALKLAELAKD-----IFPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAPSIKRTHMELGG 248 (472)
T ss_pred CCCCHHHHHHHHHHHH-----hCCcCeEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcccceEEecCC
Confidence 9999999999888753 39999999999964 77899986 8999999999999999999999999999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHH
Q 012790 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 242 (456)
Q Consensus 163 k~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~ 242 (456)
|||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++++++
T Consensus 249 k~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~ 328 (472)
T TIGR03374 249 KAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLE 328 (472)
T ss_pred CCeeEECCCCCHHHHHHHHHHHHHhhcCCccccCCEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcC-CeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCC
Q 012790 243 KLQNLVNDALDKG-AEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 321 (456)
Q Consensus 243 ~v~~~i~~a~~~G-a~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~g 321 (456)
++.++|++++++| +++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 329 ~v~~~i~~a~~~G~a~v~~gg~~~----~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an~~~~g 404 (472)
T TIGR03374 329 RVMKAVEEAKALGHIKVITGGEKR----KGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNWANDSQYG 404 (472)
T ss_pred HHHHHHHHHHHcCCeEEEeCCccC----CCCCeEEeeEEEeCCCCCChhhhCCccCceEEEEEECCHHHHHHHHhCCCCC
Confidence 9999999999999 7999999731 2358999999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEE
Q 012790 322 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 390 (456)
Q Consensus 322 L~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~ 390 (456)
|++||||+|.+++.++++++++|.|+||++... .+.+||||+|+||+|++||++||++||+.|+++.
T Consensus 405 L~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~~ 471 (472)
T TIGR03374 405 LASSVWTKDVGRAHRLSARLQYGCTWVNTHFML--VSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHIMV 471 (472)
T ss_pred ceEEEECCCHHHHHHHHHhCCcceEEECCCCCC--CCCCCCCCCccCccCccchHHHHHHhhceEEEEE
Confidence 999999999999999999999999999987543 4569999999999999999999999999999864
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. |
| >cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-85 Score=683.23 Aligned_cols=377 Identities=33% Similarity=0.594 Sum_probs=348.3
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++++++|++++....... .....+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 75 a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~vvlKp 153 (454)
T cd07101 75 AFEEVLDVAIVARYYARRAERLLKPRRRRGAIP-VLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKP 153 (454)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCccccccCC-CCceEEEEEEeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEEC
Confidence 457999999999999999999987765432221 1346789999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHhccCEEEecCCHHHHHHHHHHhhccCCcccccCCCc
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK 163 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgGk 163 (456)
|+.+|.++.++.+++. ++|+|+|++|+|+|++ +.+..|++++|.|+||||+++|+.|++.++++++|+++|||||
T Consensus 154 s~~~p~~~~~l~~~~~----~aglP~gv~~~v~g~~~~~~~~l~~~~~~V~fTGs~~~g~~i~~~aa~~~~~~~lElgG~ 229 (454)
T cd07101 154 DSQTALTALWAVELLI----EAGLPRDLWQVVTGPGSEVGGAIVDNADYVMFTGSTATGRVVAERAGRRLIGCSLELGGK 229 (454)
T ss_pred CccchHHHHHHHHHHH----HcCcCCCcEEEEeCCcHHHHHHHHhCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCC
Confidence 9999999988888754 7899999999999965 6788888888999999999999999999999999999999999
Q ss_pred ceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHHH
Q 012790 164 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEK 243 (456)
Q Consensus 164 ~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~ 243 (456)
||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||+++++++++
T Consensus 230 ~p~iV~~dAdl~~a~~~i~~~~~~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~~~~~~~~~gpli~~~~~~~ 309 (454)
T cd07101 230 NPMIVLEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDR 309 (454)
T ss_pred ceEEECCCCCHHHHHHHHHHHHHhcCCCCcccCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCce
Q 012790 244 LQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLG 323 (456)
Q Consensus 244 v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~ 323 (456)
+++++++++++|+++++||.... +..++|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+
T Consensus 310 v~~~v~~a~~~Ga~vl~gg~~~~---~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~ 386 (454)
T cd07101 310 VTAHVDDAVAKGATVLAGGRARP---DLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLN 386 (454)
T ss_pred HHHHHHHHHHCCCEEEeCCCCCC---CCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCce
Confidence 99999999999999999986321 235799999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCHHHHHHHHHhcccCCeeecCCccc-ccCcCCCccCCCCCCCCCcchHHHHhccceeeEEE
Q 012790 324 CAVFSGSQHRAREIAAQIQCGVAAINDFASN-YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389 (456)
Q Consensus 324 ~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~ 389 (456)
+||||+|.++++++++++++|.|+||++..+ ...+.+||||+|.||+|+++|++|+++||+.|+++
T Consensus 387 ~~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~ 453 (454)
T cd07101 387 ASVWTRDGARGRRIAARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLGRRHGAEGLLKYTETQTVA 453 (454)
T ss_pred EEEEcCCHHHHHHHHHhcCcceEEECCCCCcCcCCCCCCCCcccccccCccchHHHHHHhcceEEEe
Confidence 9999999999999999999999999997553 23456899999999999999999999999999985
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). |
| >cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-85 Score=687.02 Aligned_cols=374 Identities=29% Similarity=0.454 Sum_probs=342.2
Q ss_pred HHHHHHHHHHHHHHHhhhhhhCCcccCCCcc---cccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEe
Q 012790 7 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRS---MIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIK 83 (456)
Q Consensus 7 ~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlK 83 (456)
.|+..+++.++|+++.++++.... ...... ......+++++|+|||++|+|||||+.+.++++++||++||+||+|
T Consensus 98 ~ev~~~~~~l~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlK 176 (477)
T cd07113 98 FEVGQSANFLRYFAGWATKINGET-LAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVWKIGAALATGCTIVIK 176 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcc-cccccccccCCCceEEEEEeecceEEEEcCCChHHHHHHHHHHHHHHcCCEEEEE
Confidence 499999999999988776653221 111100 0123567899999999999999999999999999999999999999
Q ss_pred cCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCC
Q 012790 84 VSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 84 ps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg 161 (456)
||+.+|.++.++.+++ .++|+|+|++|+|+|+++.+..|++ ++|+|+||||+++|+.|++.++++++|+++|||
T Consensus 177 Ps~~tp~~~~~l~~~~----~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~~~lElG 252 (477)
T cd07113 177 PSEFTPLTLLRVAELA----KEAGIPDGVLNVVNGKGAVGAQLISHPDVAKVSFTGSVATGKKIGRQAASDLTRVTLELG 252 (477)
T ss_pred CCCCCcHHHHHHHHHH----HHcCcCCCcEEEEecCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhhcCceEeecC
Confidence 9999999998887775 4789999999999997668888887 799999999999999999999999999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
||||+||++|||++.|++.|++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.++
T Consensus 253 Gkn~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~ 332 (477)
T cd07113 253 GKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDELVTKLKQALSSFQVGSPMDESVMFGPLANQPHF 332 (477)
T ss_pred CCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCcCCcEEEECHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCC
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 321 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~g 321 (456)
+++.++|++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 333 ~~~~~~i~~a~~~Ga~~l~gg~~~----~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~g 408 (477)
T cd07113 333 DKVCSYLDDARAEGDEIVRGGEAL----AGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEELIQLINDTPFG 408 (477)
T ss_pred HHHHHHHHHHHHCCCEEEeCCCCC----CCCCeeEeCEEEecCCCCChHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCC
Confidence 999999999999999999999742 2358999999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEc
Q 012790 322 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 322 L~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~ 391 (456)
|++||||+|.++++++++++++|.|+||++... .+.+||||+|+||+|++||++||++||+.|+|+.+
T Consensus 409 L~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 476 (477)
T cd07113 409 LTASVWTNNLSKALRYIPRIEAGTVWVNMHTFL--DPAVPFGGMKQSGIGREFGSAFIDDYTELKSVMIR 476 (477)
T ss_pred ceEEEECCCHHHHHHHHHhCCcceEEECCCCCC--CCCCCCCCCccccCCccchHHHHHHhhceEEEEEe
Confidence 999999999999999999999999999976432 35689999999999999999999999999998753
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. |
| >PLN02315 aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-84 Score=686.16 Aligned_cols=378 Identities=24% Similarity=0.393 Sum_probs=347.1
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++.+++..+. ..+.. ......++.++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 113 a~~ev~~~i~~~~~~~~~~~~l~~~-~~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKP 189 (508)
T PLN02315 113 GIGEVQEIIDMCDFAVGLSRQLNGS-IIPSE--RPNHMMMEVWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKG 189 (508)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCc-cccCC--CCCceeEEEEecceEEEEECCCcchHHHHHHHHhHHHHcCCEEEeeC
Confidence 4579999999999999887664321 11111 01233467899999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgG 162 (456)
|+.+|.++..+.+++.++|.++|+|+|++|+++|+.+.+..|+. ++|+|+||||+++|+.|+++++++++|+++||||
T Consensus 190 s~~tp~~~~~~~~l~~~~~~~aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v~fTGS~~~G~~v~~~aa~~~~~~~lElgG 269 (508)
T PLN02315 190 APTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCGGAEIGEAIAKDTRIPLVSFTGSSKVGLMVQQTVNARFGKCLLELSG 269 (508)
T ss_pred CCcChHHHHHHHHHHHHHHHHcCCCcccEEEecCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCCEEEecCC
Confidence 99999999999999999999999999999999996678888886 9999999999999999999999999999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHH
Q 012790 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 242 (456)
Q Consensus 163 k~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~ 242 (456)
|||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|+|.++++++||+++..+++
T Consensus 270 knp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~ 349 (508)
T PLN02315 270 NNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLEQLLTVYKQVKIGDPLEKGTLLGPLHTPESKK 349 (508)
T ss_pred CCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCc
Q 012790 243 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 322 (456)
Q Consensus 243 ~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL 322 (456)
++.+++++++++|+++++||... +..|+|++|||+ +++++|++++||+||||++|++|+|+||||+++|+++|||
T Consensus 350 ~v~~~i~~a~~~Ga~vl~gG~~~----~~~g~~~~Ptvl-~v~~~~~i~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL 424 (508)
T PLN02315 350 NFEKGIEIIKSQGGKILTGGSAI----ESEGNFVQPTIV-EISPDADVVKEELFGPVLYVMKFKTLEEAIEINNSVPQGL 424 (508)
T ss_pred HHHHHHHHHHHCCCEEEECCCcC----CCCCeEEecEEE-ecCCCChHHhCCCcCCEEEEEEeCCHHHHHHHHhCCCCCC
Confidence 99999999999999999999742 246899999999 6999999999999999999999999999999999999999
Q ss_pred eeEEecCCHHHHHHHHH--hcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEc
Q 012790 323 GCAVFSGSQHRAREIAA--QIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 323 ~~~vft~d~~~~~~~~~--~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~ 391 (456)
++||||+|.+.++++++ ++++|.|+||+..... .+.+||||+|+||+|+++|.+|+++||+.|+|+.+
T Consensus 425 ~a~Vft~d~~~a~~~~~~~~l~~G~v~iN~~~~~~-~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~ 494 (508)
T PLN02315 425 SSSIFTRNPETIFKWIGPLGSDCGIVNVNIPTNGA-EIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTIN 494 (508)
T ss_pred eEEEEcCCHHHHHHHhhhcccceeEEEEcCCCCCC-CCCCCCCccccccCCccchHHHHHHHhhEEEEEEe
Confidence 99999999999999985 7999999999854332 34589999999999999999999999999998775
|
|
| >PLN02278 succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-84 Score=686.03 Aligned_cols=375 Identities=31% Similarity=0.525 Sum_probs=345.2
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++.++++.... .+.. ......+++++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 119 a~~Ev~~~i~~~~~~~~~~~~~~g~~-~~~~--~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKp 195 (498)
T PLN02278 119 AIGEVAYGASFLEYFAEEAKRVYGDI-IPSP--FPDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALAAGCTVVVKP 195 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcc-cccC--CCCceEEEEeecccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEEC
Confidence 34699999999999999998875422 1211 12345678899999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg 161 (456)
|+.+|.++..+.+++ .++|+|+|++++|+|++ +.++.|++ ++|+|+||||+++|+.|++.++++++|+++|||
T Consensus 196 s~~tp~~~~~l~~~l----~eaglP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~~~lElG 271 (498)
T PLN02278 196 SELTPLTALAAAELA----LQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGAAATVKRVSLELG 271 (498)
T ss_pred CCCChHHHHHHHHHH----HHcCCCcccEEEEecCChhhHHHHhcCCCcCEEEEECcHHHHHHHHHHHhhcCCcEEEecC
Confidence 999999998877765 57899999999999976 66888887 899999999999999999999999999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
||||+||++|||++.|++.|++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.++
T Consensus 272 Gk~~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~ 351 (498)
T PLN02278 272 GNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFAEAFSKAVQKLVVGDGFEEGVTQGPLINEAAV 351 (498)
T ss_pred CCCeeEECCCCCHHHHHHHHHHHHhccCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCccCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCC
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 321 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~g 321 (456)
++++++|++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 352 ~~v~~~i~~a~~~Ga~vl~gG~~~----~~~g~~~~Ptvl~~v~~~~~~~~~E~FGPVl~v~~~~~~deai~~~N~~~~g 427 (498)
T PLN02278 352 QKVESHVQDAVSKGAKVLLGGKRH----SLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEAIAIANDTEAG 427 (498)
T ss_pred HHHHHHHHHHHhCCCEEEeCCccC----CCCCceEeeEEEecCCCCChhhhCCCcCCEEEEEeeCCHHHHHHHHhCCCCC
Confidence 999999999999999999999731 2358999999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEcc
Q 012790 322 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 322 L~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~ 392 (456)
|++||||+|.++++++++++++|.|+||+.... .+.+||||+|+||+|+++|++||++||+.|+|..+.
T Consensus 428 L~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~i~~~~ 496 (498)
T PLN02278 428 LAAYIFTRDLQRAWRVSEALEYGIVGVNEGLIS--TEVAPFGGVKQSGLGREGSKYGIDEYLEIKYVCLGN 496 (498)
T ss_pred ceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCC--CCCCCcCCcccCcCCccchHHHHHHhheeEEEEEec
Confidence 999999999999999999999999999986543 245899999999999999999999999999997643
|
|
| >cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-84 Score=684.33 Aligned_cols=381 Identities=28% Similarity=0.438 Sum_probs=351.4
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++.++++... ..+.. ..+...+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 92 a~~ev~~~~~~~~~~a~~~~~~~g~-~~~~~--~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VIlKp 168 (478)
T cd07086 92 GLGEVQEMIDICDYAVGLSRMLYGL-TIPSE--RPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIALVCGNTVVWKP 168 (478)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCc-ccccC--CCCceEEEEEecceeEEEECCCCcHHHHHHHHHHHHHHcCCeEEEEC
Confidence 3469999999999999988775432 11211 11235678999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgG 162 (456)
|+.+|.++..+++++.++|.++|+|+|++++|+|+++.++.|+. ++|.|+||||+++|+.|++.++++++|+++||||
T Consensus 169 s~~~p~~~~~l~~~~~~al~~~glP~gvv~~v~g~~~~~~~L~~~~~vd~v~fTGs~~~g~~i~~~aa~~~~~~~lElGG 248 (478)
T cd07086 169 SETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGDGGELLVHDPRVPLVSFTGSTEVGRRVGETVARRFGRVLLELGG 248 (478)
T ss_pred CCcchHHHHHHHHHHHHhhhccCCCccceEEEecCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCcEEeecCC
Confidence 99999999999999999999999999999999997777888887 6999999999999999999999999999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHH
Q 012790 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 242 (456)
Q Consensus 163 k~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~ 242 (456)
|||+||++|||++.|++.|++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++
T Consensus 249 ~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~ 328 (478)
T cd07086 249 NNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEFLERLVKAYKQVRIGDPLDEGTLVGPLINQAAVE 328 (478)
T ss_pred CCcEEEcCCCCHHHHHHHHHHHHHhccCCCCcCCeEEEEcHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCc
Q 012790 243 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 322 (456)
Q Consensus 243 ~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL 322 (456)
+++++|++|+++|+++++||..... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||
T Consensus 329 ~v~~~i~~a~~~Ga~v~~gg~~~~~--~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPVl~v~~~~~~deai~~~n~~~~gL 406 (478)
T cd07086 329 KYLNAIEIAKSQGGTVLTGGKRIDG--GEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAINNDVPQGL 406 (478)
T ss_pred HHHHHHHHHHHCCCEEEeCCCcCCC--CCCCeEEccEEecCCCCCChhhcCCCcCCEEEEEEeCCHHHHHHHHhCCCCcc
Confidence 9999999999999999999974211 12588999999999999999999999999999999999999999999999999
Q ss_pred eeEEecCCHHHHHHHHHh--cccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEc
Q 012790 323 GCAVFSGSQHRAREIAAQ--IQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 323 ~~~vft~d~~~~~~~~~~--l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~ 391 (456)
++||||+|.+++++++++ +++|.|+||+.... ..+.+||||+|+||+|++||++|+++||+.|+|+.+
T Consensus 407 ~a~v~t~d~~~a~~~~~~~~~~~G~v~iN~~~~~-~~~~~PfgG~~~SG~G~~~g~~~~~~f~~~k~i~~~ 476 (478)
T cd07086 407 SSSIFTEDLREAFRWLGPKGSDCGIVNVNIPTSG-AEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCTIN 476 (478)
T ss_pred eEEEEcCCHHHHHHHHhcCcccceeEEECCCCCC-CCCCCCCCCcccccCCccchHHHHHHhhceEEEEEe
Confidence 999999999999999999 99999999997554 345689999999999999999999999999999764
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). |
| >cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-84 Score=682.85 Aligned_cols=378 Identities=26% Similarity=0.412 Sum_probs=346.7
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++..+.+. .+..+.. ..+...+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 91 a~~ev~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKp 167 (474)
T cd07130 91 GLGEVQEMIDICDFAVGLSRQLY-GLTIPSE--RPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIALVCGNVVVWKP 167 (474)
T ss_pred HHHHHHHHHHHHHHHHHhHHHhc-CccccCC--CCCceEEEEEecceeEEEEccCCCHHHHHHHHhhHHHHcCCeEEeeC
Confidence 45799999999999988765442 2221111 12334578899999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgG 162 (456)
|+.+|.++.++++++.++|.++|+|+|++|+|+|+.+.++.|++ ++|+|+||||+++|+.|++.++++++|+++||||
T Consensus 168 s~~~p~~~~~l~~l~~~~~~~aglP~gv~~~v~g~~~~~~~L~~~~~vd~V~fTGs~~~g~~i~~~aa~~~~~~~lElGG 247 (474)
T cd07130 168 SPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCGGADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVAARFGRSLLELGG 247 (474)
T ss_pred CccCHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHhcCCCEEEEcCC
Confidence 99999999999999999999999999999999998788888987 9999999999999999999999999999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHH
Q 012790 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 242 (456)
Q Consensus 163 k~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~ 242 (456)
|||+||++|||++.|++.|++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++
T Consensus 248 k~p~iV~~dadl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~ 327 (474)
T cd07130 248 NNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKKAYKQVRIGDPLDDGTLVGPLHTKAAVD 327 (474)
T ss_pred CCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEcHhHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCc
Q 012790 243 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 322 (456)
Q Consensus 243 ~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL 322 (456)
+++++|++|+++|+++++||... +..|+|++|||+.++++ |++++||+||||++|++|+|+||||+++|+++|||
T Consensus 328 ~~~~~i~~a~~~Ga~v~~gg~~~----~~~g~~~~PTvl~~~~~-~~i~~eE~FGPvl~v~~~~~~~eai~~aN~~~~gL 402 (474)
T cd07130 328 NYLAAIEEAKSQGGTVLFGGKVI----DGPGNYVEPTIVEGLSD-APIVKEETFAPILYVLKFDTLEEAIAWNNEVPQGL 402 (474)
T ss_pred HHHHHHHHHHHCCCEEEECCCcC----CCCCeEEccEEEecCCC-CHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCc
Confidence 99999999999999999999842 23589999999998766 99999999999999999999999999999999999
Q ss_pred eeEEecCCHHHHHHHHHh--cccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEc
Q 012790 323 GCAVFSGSQHRAREIAAQ--IQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 323 ~~~vft~d~~~~~~~~~~--l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~ 391 (456)
++||||+|.+++++++++ +++|.|+||+.... ..+.+||||+|+||+|+++|++|+++||+.|++..+
T Consensus 403 ~a~v~t~d~~~a~~~~~~~~~~~g~v~iN~~~~~-~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~~~~~ 472 (474)
T cd07130 403 SSSIFTTDLRNAFRWLGPKGSDCGIVNVNIGTSG-AEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCTIN 472 (474)
T ss_pred eEEEEcCCHHHHHHHHhhcCcceEEEEEcCCCCC-CCCCCCcCccccccCCccchHHHHHHHhheEEEEEe
Confidence 999999999999999987 89999999985433 234689999999999999999999999999998753
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. |
| >cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-84 Score=674.88 Aligned_cols=371 Identities=32% Similarity=0.570 Sum_probs=346.8
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|++..+++|++++..+.+ ....+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 56 a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kp 131 (429)
T cd07100 56 ARAEVEKCAWICRYYAENAEAFLADEPIETD----AGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKH 131 (429)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCeeccCC----CceEEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEEC
Confidence 3569999999999999999999876544332 345688999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgG 162 (456)
|+.+|+++..+.+++ .++|+|+|++++|+|+.+.+..|++ ++|+|.||||+++|+.|++.+++++||+++||||
T Consensus 132 s~~~p~~~~~l~~~l----~~aglP~gvv~~v~g~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG 207 (429)
T cd07100 132 ASNVPGCALAIEELF----REAGFPEGVFQNLLIDSDQVEAIIADPRVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGG 207 (429)
T ss_pred CCcchHHHHHHHHHH----HHcCCCcCcEEEEeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCcceEEecCC
Confidence 999999998887775 4789999999999997777788887 8999999999999999999999999999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHH
Q 012790 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 242 (456)
Q Consensus 163 k~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~ 242 (456)
|||+||++|||++.|++.|++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++
T Consensus 208 ~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~ 287 (429)
T cd07100 208 SDPFIVLDDADLDKAVKTAVKGRLQNAGQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRD 287 (429)
T ss_pred CCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCc
Q 012790 243 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 322 (456)
Q Consensus 243 ~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL 322 (456)
++++++++++++|+++++||... +..|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||
T Consensus 288 ~v~~~i~~a~~~Ga~~~~gg~~~----~~~g~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl 363 (429)
T cd07100 288 ELHEQVEEAVAAGATLLLGGKRP----DGPGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGL 363 (429)
T ss_pred HHHHHHHHHHHCCCEEEeCCCcC----CCCCeEEcCEEeecCCCCCHHHhCCCCCCeEEEeeeCCHHHHHHHHhCCCcCc
Confidence 99999999999999999999742 23589999999999999999999999999999999999999999999999999
Q ss_pred eeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEE
Q 012790 323 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389 (456)
Q Consensus 323 ~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~ 389 (456)
++||||+|.+.++++++++++|.|+||++... .+.+||||+|+||+|+++|+++|++||+.|+|+
T Consensus 364 ~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 428 (429)
T cd07100 364 GGSVFTTDLERAERVARRLEAGMVFINGMVKS--DPRLPFGGVKRSGYGRELGRFGIREFVNIKTVW 428 (429)
T ss_pred eEEEECCCHHHHHHHHHhCCcCeEEECCCCCC--CCCCCcCCccccccCCcchHHHHHHhcceeEEe
Confidence 99999999999999999999999999987643 356899999999999999999999999999984
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. |
| >cd07099 ALDH_DDALDH Methylomonas sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-84 Score=678.73 Aligned_cols=377 Identities=39% Similarity=0.664 Sum_probs=351.9
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++.++++++.+..+......+...+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 75 ~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~ALaaGN~vilKp 154 (453)
T cd07099 75 AGLEVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKP 154 (453)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCccccCcccCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEEC
Confidence 45799999999999999999988765443322123456789999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh-ccCEEEecCCHHHHHHHHHHhhccCCcccccCCCc
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK 163 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~-~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgGk 163 (456)
|+.+|+++.++.+++. ++|+|+|++++|+|+++.+..|++ .+|.|+||||+++|+.|++.++++++|+++|||||
T Consensus 155 s~~~p~~~~~l~~~l~----~ag~P~g~~~vv~g~~~~~~~l~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~~lelgG~ 230 (453)
T cd07099 155 SEVTPLVGELLAEAWA----AAGPPQGVLQVVTGDGATGAALIDAGVDKVAFTGSVATGRKVMAAAAERLIPVVLELGGK 230 (453)
T ss_pred CccchHHHHHHHHHHH----HcCCCCCeEEEEeCCchHHHHHhcCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCC
Confidence 9999999988887764 789999999999997788888988 89999999999999999999999999999999999
Q ss_pred ceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHHH
Q 012790 164 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEK 243 (456)
Q Consensus 164 ~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~ 243 (456)
||+||++|||++.|++.|++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.++++
T Consensus 231 ~p~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~~~~~~~~~gp~i~~~~~~~ 310 (453)
T cd07099 231 DPMIVLADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDIGDADIGPMTTARQLDI 310 (453)
T ss_pred CeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCCcCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCce
Q 012790 244 LQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLG 323 (456)
Q Consensus 244 v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~ 323 (456)
+.+++++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||+
T Consensus 311 ~~~~i~~a~~~ga~~~~gg~~~----~~~g~~~~Ptil~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~ 386 (453)
T cd07099 311 VRRHVDDAVAKGAKALTGGARS----NGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDSRYGLS 386 (453)
T ss_pred HHHHHHHHHhCCCEEEeCCCcC----CCCCeEEecEEEecCCCCCHHHhCCCcCCeeEEEeeCCHHHHHHHHhCCCCCCe
Confidence 9999999999999999999742 146899999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEE
Q 012790 324 CAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389 (456)
Q Consensus 324 ~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~ 389 (456)
+||||+|.+.++++++++++|.|+||+...+...+.+||||+|.||+|++||++||++||+.|+++
T Consensus 387 ~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~g~~~g~~~~~~~t~~k~v~ 452 (453)
T cd07099 387 ASVFSRDLARAEAIARRLEAGAVSINDVLLTAGIPALPFGGVKDSGGGRRHGAEGLREFCRPKAIA 452 (453)
T ss_pred EEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCCCcccccCCccChHHHHHHhcceEEEe
Confidence 999999999999999999999999999876665667999999999999999999999999999985
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. |
| >PLN02466 aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-84 Score=687.53 Aligned_cols=372 Identities=32% Similarity=0.539 Sum_probs=341.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecC
Q 012790 6 LGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 85 (456)
Q Consensus 6 ~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps 85 (456)
..|+..+++.++|+++.+++.... ..+.. .....+++++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus 156 ~~Ev~~~~~~l~~~a~~~~~~~g~-~~~~~---~~~~~~~~~~P~GVV~~I~PwN~P~~l~~~~i~pALaaGN~VVlKPs 231 (538)
T PLN02466 156 KAELPMFARLFRYYAGWADKIHGL-TVPAD---GPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 231 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCc-ccccC---CCceEEEEEecceEEEEECCCchHHHHHHHHHhHHHHcCCEEEeECC
Confidence 469999999999998877665322 11111 12346899999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhc-cCCcccccCC
Q 012790 86 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASK-TLTPVTLELG 161 (456)
Q Consensus 86 ~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~-~~~pv~lElg 161 (456)
+.+|.++.++++++ .++|+|+|++|+|+|++ +.+..|++ ++|+|+||||+++|+.|++.+++ ++||+++|||
T Consensus 232 ~~tp~~~~~l~~ll----~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTGS~~~G~~v~~~aa~~~l~pv~lElG 307 (538)
T PLN02466 232 EQTPLSALYAAKLL----HEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAAKSNLKPVTLELG 307 (538)
T ss_pred CCCcHHHHHHHHHH----HhcCCCcccEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHhcCCCcEEEEcC
Confidence 99999998888876 47899999999999965 66888886 89999999999999999999985 8999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++.++++|+|.++++++||+++++++
T Consensus 308 Gknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~ 387 (538)
T PLN02466 308 GKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRVVGDPFKKGVEQGPQIDSEQF 387 (538)
T ss_pred CCCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCcCcEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCCccCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCC
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 321 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~g 321 (456)
++++++|++++++|+++++||... +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 388 ~~v~~~v~~a~~~Ga~v~~gg~~~----~~~g~~i~Ptvl~~v~~d~~i~~eE~FGPVl~v~~~~d~deAi~~aN~~~~G 463 (538)
T PLN02466 388 EKILRYIKSGVESGATLECGGDRF----GSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDEVIRRANNTRYG 463 (538)
T ss_pred HHHHHHHHHHHHCCCEEEecCCcC----CCCceEEEEEEEecCCCCCchhcCCccCcEEEEEEeCCHHHHHHHHhCCCCC
Confidence 999999999999999999999742 2368999999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEc
Q 012790 322 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 322 L~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~ 391 (456)
|++||||+|.++++++++++++|.|+||++... .+.+||||+|+||+|++||++|+++||+.|+|+..
T Consensus 464 L~a~VfT~d~~~a~~~~~~l~aG~v~IN~~~~~--~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~~ 531 (538)
T PLN02466 464 LAAGVFTQNLDTANTLSRALRVGTVWVNCFDVF--DAAIPFGGYKMSGIGREKGIYSLNNYLQVKAVVTP 531 (538)
T ss_pred ceEEEEcCCHHHHHHHHHhCCeeeEEECCCCCC--CCCCCcCCCCcCccCcccHHHHHHHhcceEEEEEe
Confidence 999999999999999999999999999986432 34589999999999999999999999999999774
|
|
| >PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-83 Score=683.28 Aligned_cols=381 Identities=33% Similarity=0.558 Sum_probs=350.4
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|++++++++++++....... .....+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 111 a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~P~N~Pl~~~~~~~~~ALaaGN~VIlKP 189 (524)
T PRK09407 111 AFEEVLDVALTARYYARRAPKLLAPRRRAGALP-VLTKTTELRQPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKP 189 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCccccccCC-CCceEEEEEecceEEEEEeCCCChHHHHHHHHHHHHHcCCEEEEEC
Confidence 457999999999999999999987654322111 1246789999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHhccCEEEecCCHHHHHHHHHHhhccCCcccccCCCc
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK 163 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgGk 163 (456)
|+.+|.++.++++++. ++|+|+|++++|+|++ +.++.|++++|.|+||||+++|++|++.++++++|+++|||||
T Consensus 190 s~~tp~~~~~l~~ll~----eaGlP~gvv~~v~g~~~~~~~~L~~~~d~V~fTGs~~~g~~v~~~aa~~~~~v~lElGGk 265 (524)
T PRK09407 190 DSQTPLTALAAVELLY----EAGLPRDLWQVVTGPGPVVGTALVDNADYLMFTGSTATGRVLAEQAGRRLIGFSLELGGK 265 (524)
T ss_pred CCCCHHHHHHHHHHHH----HcCCCcccEEEEecCCchHHHHHHhcCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCC
Confidence 9999999998888764 7899999999999965 6788888889999999999999999999999999999999999
Q ss_pred ceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHHH
Q 012790 164 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEK 243 (456)
Q Consensus 164 ~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~ 243 (456)
||+||++|||++.|++.|++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||+++++++++
T Consensus 266 np~iV~~dADl~~Aa~~i~~~~f~~sGQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~ 345 (524)
T PRK09407 266 NPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVRAFVAAVRAMRLGAGYDYSADMGSLISEAQLET 345 (524)
T ss_pred ceeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCcCCccCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCce
Q 012790 244 LQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLG 323 (456)
Q Consensus 244 v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~ 323 (456)
+++++++++++|+++++||.... +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+
T Consensus 346 v~~~i~~a~~~Ga~vl~gG~~~~---~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~deai~~~N~~~~gLs 422 (524)
T PRK09407 346 VSAHVDDAVAKGATVLAGGKARP---DLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVERANDTPYGLN 422 (524)
T ss_pred HHHHHHHHHhCCCEEEeCCccCC---CCCCceEeCEEEeCCCCCChHHhCCCCCCeEEEEeeCCHHHHHHHHhCCCCCce
Confidence 99999999999999999997311 225799999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCHHHHHHHHHhcccCCeeecCCccc-ccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEccc
Q 012790 324 CAVFSGSQHRAREIAAQIQCGVAAINDFASN-YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRW 393 (456)
Q Consensus 324 ~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~~ 393 (456)
+||||+|.++++++++++++|.|+||+...+ ...+.+||||+|+||+|+++|.+|+++||+.|+|+.+..
T Consensus 423 a~V~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~~~ 493 (524)
T PRK09407 423 ASVWTGDTARGRAIAARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLGRRHGAEGLLKYTESQTIATQRV 493 (524)
T ss_pred EEEECCCHHHHHHHHHhCCcceEEECCCCCcCcCCCCCCCCCccccccCccchHHHHHHhCCeEEEEEccc
Confidence 9999999999999999999999999986542 234458999999999999999999999999999988753
|
|
| >TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-84 Score=680.78 Aligned_cols=377 Identities=31% Similarity=0.481 Sum_probs=341.8
Q ss_pred HHHHHHHHHHHHHHHhhhhhhCCcccCCCc-ccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecC
Q 012790 7 GEIMTTCEKITWLLSEGEKWLKPEYRSSGR-SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 85 (456)
Q Consensus 7 ~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps 85 (456)
.|+..+++.++|+++.+++.... ..+... ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus 97 ~ev~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~Pl~~~~~~~~~ALaaGN~vvlKPs 175 (481)
T TIGR03216 97 LDIPRGAANFRVFADVVKNAPTE-CFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPS 175 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCc-cccccCCCCCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECC
Confidence 58889999999999988654221 111100 0012346789999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh--HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCC
Q 012790 86 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA--ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 86 ~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~--~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg 161 (456)
+.+|+++.++.+++. ++|+|+|++++|+|++ +.++.|+. ++|+|+||||+.+|+.|+++++++++|+++|||
T Consensus 176 ~~tp~t~~~l~~l~~----~aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~fTGS~~~G~~i~~~aa~~~~~~~lElg 251 (481)
T TIGR03216 176 EETPGTATLLGEVMN----AVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMKAAADGVKPVSFELG 251 (481)
T ss_pred ccchHHHHHHHHHHH----HcCCCcCceEEEecCChhHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhcCCCeEEEECC
Confidence 999999988888764 7899999999999854 36777876 899999999999999999999999999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|.++++++||++++.++
T Consensus 252 G~n~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~ 331 (481)
T TIGR03216 252 GKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFVAALKARAESLKIGVPDDPATNMGPLISAEHR 331 (481)
T ss_pred CCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCC-CCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCC
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHLS-EGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRY 320 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~-~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~ 320 (456)
++++++|++++++|+++++||.....+ ....|+|++|||+++++++|++++||+||||++|++|+|.||||+++|+++|
T Consensus 332 ~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FgPvl~V~~~~~~~eai~~~n~~~~ 411 (481)
T TIGR03216 332 DKVLSYYALAVEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDSEEEVIALANDTPY 411 (481)
T ss_pred HHHHHHHHHHHHCCCEEEeCCCcccccccCCCCceEccEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhCCCc
Confidence 999999999999999999999742211 1136899999999999999999999999999999999999999999999999
Q ss_pred CceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEE
Q 012790 321 GLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 390 (456)
Q Consensus 321 gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~ 390 (456)
||++||||+|.+.++++++++++|.|+||++..+ .+.+||||+|+||+|++||++|+++||+.|+|..
T Consensus 412 gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~l~~f~~~k~v~~ 479 (481)
T TIGR03216 412 GLAASVWTEDLSRAHRVARQMEVGIVWVNSWFLR--DLRTPFGGSKLSGIGREGGVHSLEFYTELTNVCI 479 (481)
T ss_pred cceEEEECCCHHHHHHHHHhcCccEEEECCCCCC--CCCCCcCCcccCcCCcCchHHHHHHhhceEEEEE
Confidence 9999999999999999999999999999987654 3468999999999999999999999999999865
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation. |
| >PRK13252 betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-84 Score=681.87 Aligned_cols=376 Identities=29% Similarity=0.494 Sum_probs=344.3
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecC
Q 012790 6 LGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 85 (456)
Q Consensus 6 ~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps 85 (456)
..|+..+++.++|+++.++.... +..+.. .....+++++|+|||++|+|||||+.++++++++||++||+||+|||
T Consensus 103 ~~ev~~~~~~l~~~~~~~~~~~g-~~~~~~---~~~~~~~~~~PlGVv~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps 178 (488)
T PRK13252 103 VVDIVTGADVLEYYAGLAPALEG-EQIPLR---GGSFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPS 178 (488)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC-ceeccC---CCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHhcCCeEEEeCC
Confidence 35898999999999998765322 211111 13356889999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCCc
Q 012790 86 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK 163 (456)
Q Consensus 86 ~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgGk 163 (456)
+.+|.++.++++++. ++|+|+|++|+|+|+++.++.|+. ++|.|+||||+++|+.|+++++++++|+++|||||
T Consensus 179 ~~~p~t~~~l~~~~~----~aglP~g~v~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~aa~~l~~~~lElgG~ 254 (488)
T PRK13252 179 EVTPLTALKLAEIYT----EAGLPDGVFNVVQGDGRVGAWLTEHPDIAKVSFTGGVPTGKKVMAAAAASLKEVTMELGGK 254 (488)
T ss_pred ccCcHHHHHHHHHHH----HcCcCcccEEEEecCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCcEEEEcCCC
Confidence 999999998888764 689999999999997778888887 79999999999999999999999999999999999
Q ss_pred ceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHHH
Q 012790 164 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEK 243 (456)
Q Consensus 164 ~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~ 243 (456)
||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.++++
T Consensus 255 ~p~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~ 334 (488)
T PRK13252 255 SPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEARLLERVERIRIGDPMDPATNFGPLVSFAHRDK 334 (488)
T ss_pred CeeEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcccccCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCce
Q 012790 244 LQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLG 323 (456)
Q Consensus 244 v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~ 323 (456)
++++|++++++|+++++||..........|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+
T Consensus 335 ~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~ 414 (488)
T PRK13252 335 VLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDEVIARANDTEYGLA 414 (488)
T ss_pred HHHHHHHHHHCCCEEEeCCcccccccCCCCeEEccEEeccCCCCChHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCCe
Confidence 99999999999999999996432111235899999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEc
Q 012790 324 CAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 324 ~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~ 391 (456)
+||||+|.++++++++++++|.|+||++.. ..+.+||||+|+||+|++||++|+++||+.|+|+..
T Consensus 415 a~I~t~d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~i~~~ 480 (488)
T PRK13252 415 AGVFTADLSRAHRVIHQLEAGICWINTWGE--SPAEMPVGGYKQSGIGRENGIATLEHYTQIKSVQVE 480 (488)
T ss_pred EEEEeCCHHHHHHHHHhcCccEEEECCCCC--CCCCCCCCCCccCcCCcCChHHHHHHhcceEEEEEe
Confidence 999999999999999999999999998643 234589999999999999999999999999999875
|
|
| >cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-83 Score=676.62 Aligned_cols=387 Identities=53% Similarity=0.902 Sum_probs=357.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecC
Q 012790 6 LGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 85 (456)
Q Consensus 6 ~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps 85 (456)
..|+..+++.++|+++++++++.++..+.+........+++++|+|||++|+|||||+.+++.++++||++||+||+|||
T Consensus 77 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~ALaaGN~VIlKps 156 (465)
T cd07098 77 LGEILVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVS 156 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcccCCccccCCceeEEEEecceeEEEEcccCcHHHHHHHHHHHHHHcCCEEEEECC
Confidence 45899999999999999888776544333221223456889999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCCc
Q 012790 86 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK 163 (456)
Q Consensus 86 ~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgGk 163 (456)
+.+|+++..+++++.++|.++|+|+|++|+|+|+.+.+..|+. ++|.|.||||+.+|+.|++.++++++|+++|+|||
T Consensus 157 ~~~p~~~~~~~~~~~~~l~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~v~~~a~~~~~~~~lelgG~ 236 (465)
T cd07098 157 EQVAWSSGFFLSIIRECLAACGHDPDLVQLVTCLPETAEALTSHPVIDHITFIGSPPVGKKVMAAAAESLTPVVLELGGK 236 (465)
T ss_pred CcCcHHHHHHHHHHHHHHHhcCCCCCeEEEEECCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCC
Confidence 9999999999999999999999999999999998788899987 89999999999999999999999999999999999
Q ss_pred ceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHHH
Q 012790 164 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEK 243 (456)
Q Consensus 164 ~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~ 243 (456)
||+||++|||++.|++.|++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.++++
T Consensus 237 ~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~ 316 (465)
T cd07098 237 DPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDR 316 (465)
T ss_pred CeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCce
Q 012790 244 LQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLG 323 (456)
Q Consensus 244 v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~ 323 (456)
+.+++++++++|+++++||.....+....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+
T Consensus 317 ~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLs 396 (465)
T cd07098 317 LEELVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLG 396 (465)
T ss_pred HHHHHHHHHHCCCEEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCce
Confidence 99999999999999999986422111235899999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEcc
Q 012790 324 CAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 324 ~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~ 392 (456)
+||||+|.+.++++++++++|.|+||+..++...+.+||||+|.||+|+++|++++++||+.|++..++
T Consensus 397 a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~~~~ 465 (465)
T cd07098 397 ASVFGKDIKRARRIASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFGRFAGEEGLRGLCNPKSVTEDR 465 (465)
T ss_pred EEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCcCccccccCCccChHHHHHHhheeEEEEEeC
Confidence 999999999999999999999999999765555567899999999999999999999999999997653
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. |
| >cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-84 Score=671.31 Aligned_cols=387 Identities=29% Similarity=0.504 Sum_probs=351.2
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecC
Q 012790 6 LGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 85 (456)
Q Consensus 6 ~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps 85 (456)
..|+..+++.++|+++.+++|.+++..+......+...+++++|+|||++|+|||||+.++++++++||++||+||+|||
T Consensus 57 ~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps 136 (449)
T cd07136 57 MTEIGFVLSEINYAIKHLKKWMKPKRVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPS 136 (449)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCccCCccccCCceeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECc
Confidence 45999999999999999998876643332211123467899999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh-ccCEEEecCCHHHHHHHHHHhhccCCcccccCCCcc
Q 012790 86 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD 164 (456)
Q Consensus 86 ~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~-~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgGk~ 164 (456)
+.+|.++..+++++.+ + +|+|++|+|+|+.+.+..|++ .+|.|.||||+++|+.|++.++++++|+++||||||
T Consensus 137 ~~tp~~~~~l~~~~~~----a-lP~gv~~~v~g~~~~~~~L~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElgGkn 211 (449)
T cd07136 137 ELTPNTSKVIAKIIEE----T-FDEEYVAVVEGGVEENQELLDQKFDYIFFTGSVRVGKIVMEAAAKHLTPVTLELGGKS 211 (449)
T ss_pred ccchHHHHHHHHHHHH----h-CCCCEEEEEeCChHHHHHHhcCCCCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCC
Confidence 9999999998888764 4 999999999997788899988 999999999999999999999999999999999999
Q ss_pred eEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHHHH
Q 012790 165 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKL 244 (456)
Q Consensus 165 p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v 244 (456)
|+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++++.|+|.+ ++++||++++++++++
T Consensus 212 p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~g~p~~-~~~~gpli~~~~~~~i 290 (449)
T cd07136 212 PCIVDEDANLKLAAKRIVWGKFLNAGQTCVAPDYVLVHESVKEKFIKELKEEIKKFYGEDPLE-SPDYGRIINEKHFDRL 290 (449)
T ss_pred eEEECCCCCHHHHHHHHHHHHHcccCCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCCCCC-CCCccCcCCHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999987 8899999999999999
Q ss_pred HHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCcee
Q 012790 245 QNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGC 324 (456)
Q Consensus 245 ~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~ 324 (456)
+++|+++ ++++||.. +.+|+|++|||+++++++|.+++||+||||++|++|+|+||||+++|+++|||++
T Consensus 291 ~~~i~~a-----~~~~gG~~-----~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a 360 (449)
T cd07136 291 AGLLDNG-----KIVFGGNT-----DRETLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLAL 360 (449)
T ss_pred HHHHhcc-----eEEECCCc-----CCCCCEEeeEEEecCCCcChHHhccccCCeeEEEEeCCHHHHHHHHhCCCCCceE
Confidence 9999863 89999973 2368999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEcccccccccCCCCC
Q 012790 325 AVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKP 404 (456)
Q Consensus 325 ~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~~~~~~~~~~~~~ 404 (456)
||||+|.+.++++++++++|.|+||+...+...+.+||||+|.||+|+++|++|+++||+.|+|+.+.. .++.+
T Consensus 361 ~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~~~------~~~~~ 434 (449)
T cd07136 361 YLFSEDKKVEKKVLENLSFGGGCINDTIMHLANPYLPFGGVGNSGMGSYHGKYSFDTFSHKKSILKKST------WFDLP 434 (449)
T ss_pred EEECCCHHHHHHHHHhCCcceEEECCccccccCCCCCccCcCcccCCcccCHHHHHHhccceEEEEcCC------cCCcc
Confidence 999999999999999999999999987544444568999999999999999999999999999988753 34567
Q ss_pred CCCCCCccHH
Q 012790 405 IQYPVAENGF 414 (456)
Q Consensus 405 ~~~p~~~~~~ 414 (456)
+.||+...+.
T Consensus 435 ~~~~~~~~~~ 444 (449)
T cd07136 435 LRYPPYKGKK 444 (449)
T ss_pred ccCCCCchHH
Confidence 7888854433
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. |
| >cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-84 Score=675.49 Aligned_cols=375 Identities=30% Similarity=0.470 Sum_probs=343.6
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++..+ ++.++..+.+ .....+++++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 76 a~~ev~~~~~~l~~~a~~~~-~~~~~~~~~~---~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kp 151 (456)
T cd07107 76 MLGDVMVAAALLDYFAGLVT-ELKGETIPVG---GRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKP 151 (456)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HhCCccccCC---CCceEEEEEecceEEEEECCcccHHHHHHHHHhHHHHcCCEEEEeC
Confidence 45799999999999997654 4544433322 1335679999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg 161 (456)
|+.+|.++.++++++.+ ++|+|++|+|+|++ +.++.|++ .+|+|+||||+++|++|++.++++++|+++|||
T Consensus 152 s~~~p~~~~~l~~~~~~-----~lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lElg 226 (456)
T cd07107 152 PEQAPLSALRLAELARE-----VLPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEGIKHVTLELG 226 (456)
T ss_pred CCCChHHHHHHHHHHHH-----hCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhcCCCeEEEECC
Confidence 99999999999998764 39999999999976 57888987 799999999999999999999999999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHH-hhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAA-LQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 240 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~-~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~ 240 (456)
||||+||++|||++.|++.|++++ |.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+
T Consensus 227 G~~p~iV~~dadl~~Aa~~i~~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~ 306 (456)
T cd07107 227 GKNALIVFPDADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPATTMGPLVSRQQ 306 (456)
T ss_pred CCCeEEECCCCCHHHHHHHHHHhchhhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCcccCHHH
Confidence 999999999999999999999995 9999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCC
Q 012790 241 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRY 320 (456)
Q Consensus 241 ~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~ 320 (456)
+++++++|++++++|+++++||.....+....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|
T Consensus 307 ~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~i~~~~~~~eai~~~n~~~~ 386 (456)
T cd07107 307 YDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEY 386 (456)
T ss_pred HHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEECCCCCChhhhCCCCCceEEEEeeCCHHHHHHHHhCCCC
Confidence 99999999999999999999997432222246899999999999999999999999999999999999999999999999
Q ss_pred CceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEE
Q 012790 321 GLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 390 (456)
Q Consensus 321 gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~ 390 (456)
||++||||+|.++++++++++++|.|+||++..+ .+.+||||+|+||+|++||++|+++||+.|+|..
T Consensus 387 gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~v~~ 454 (456)
T cd07107 387 GLTAAIWTNDISQAHRTARRVEAGYVWINGSSRH--FLGAPFGGVKNSGIGREECLEELLSYTQEKNVNV 454 (456)
T ss_pred cceEEEECCCHHHHHHHHHhcCcCEEEECCCCCC--CCCCCcCCcccccCCcCchHHHHHHhhceEEEEE
Confidence 9999999999999999999999999999987654 3468999999999999999999999999999875
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. |
| >cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-84 Score=677.39 Aligned_cols=374 Identities=33% Similarity=0.501 Sum_probs=341.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecC
Q 012790 6 LGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 85 (456)
Q Consensus 6 ~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps 85 (456)
..|+..+++.++|+++.+++... +.... ......+++++|+|||++|+|||||+.++++++++||++||+||+|||
T Consensus 97 ~~ev~~~i~~l~~~a~~~~~~~~-~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~Pl~~~~~~i~~AL~aGN~VvlKPs 172 (475)
T cd07117 97 AVDIPLAADHFRYFAGVIRAEEG-SANMI---DEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPALAAGNTVVIKPS 172 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC-ccccc---CCCceeEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECC
Confidence 35999999999999988765422 11111 113356899999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCC
Q 012790 86 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162 (456)
Q Consensus 86 ~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgG 162 (456)
+.+|.++..+++++.+ ++|+|++|+|+|++ +.++.|++ ++|.|+||||+.+|+.|+++++++++|+++||||
T Consensus 173 ~~~p~~~~~l~~~~~~-----~lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lElgG 247 (475)
T cd07117 173 STTSLSLLELAKIIQD-----VLPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAAKKLIPATLELGG 247 (475)
T ss_pred ccCcHHHHHHHHHHHH-----hCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCcEEEeCCC
Confidence 9999999999998864 39999999999964 67888887 7999999999999999999999999999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHH
Q 012790 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 242 (456)
Q Consensus 163 k~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~ 242 (456)
|||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.+.++++++|+|.++++++||++++++++
T Consensus 248 k~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~ 327 (475)
T cd07117 248 KSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNPLDPDTQMGAQVNKDQLD 327 (475)
T ss_pred CCeEEECCCCChHHHHHHHHHHHhhccCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCcCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCc
Q 012790 243 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 322 (456)
Q Consensus 243 ~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL 322 (456)
++.++|++++++|+++++||.....+....|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||
T Consensus 328 ~v~~~v~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL 407 (475)
T cd07117 328 KILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDEVIDMANDSEYGL 407 (475)
T ss_pred HHHHHHHHHHHCCCEEEeCCCcCccccCCCCeEEeeEEeecCCCCChhhhCCCcCCeEEEEEECCHHHHHHHHhCCCcCc
Confidence 99999999999999999999743211113589999999999999999999999999999999999999999999999999
Q ss_pred eeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEE
Q 012790 323 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 390 (456)
Q Consensus 323 ~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~ 390 (456)
++||||+|.+++.++++++++|.|+||++.. ..+.+||||+|+||+|++||++||++||+.|+++.
T Consensus 408 ~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~~ 473 (475)
T cd07117 408 GGGVFTKDINRALRVARAVETGRVWVNTYNQ--IPAGAPFGGYKKSGIGRETHKSMLDAYTQMKNIYI 473 (475)
T ss_pred eEEEECCCHHHHHHHHHhCCcceEEECCCCC--CCCCCCCCCCccCcCCCCchHHHHHHHhCeEEEEE
Confidence 9999999999999999999999999998643 24568999999999999999999999999999865
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. |
| >cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-84 Score=678.87 Aligned_cols=370 Identities=34% Similarity=0.565 Sum_probs=340.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecC
Q 012790 6 LGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 85 (456)
Q Consensus 6 ~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps 85 (456)
..|+..+++.++|+++.+++.... ..+.. .....+++++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus 102 ~~ev~~~~~~l~~~a~~~~~~~g~-~~~~~---~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VV~KPs 177 (476)
T cd07142 102 YAEVPLAARLFRYYAGWADKIHGM-TLPAD---GPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKVGPALACGNTIVLKPA 177 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCc-ccccC---CCceEEEEEeceeeEEEECCCccHHHHHHHHHHHHHHcCCEEEEECC
Confidence 459999999999999877664322 11111 12346789999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhc-cCCcccccCC
Q 012790 86 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASK-TLTPVTLELG 161 (456)
Q Consensus 86 ~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~-~~~pv~lElg 161 (456)
+.+|+++.++++++ .++|+|+|++++|+|++ +.++.|++ ++|+|+||||+++|+.|++.+++ +++|+++|||
T Consensus 178 ~~tp~~~~~l~~~~----~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~G~~v~~~aa~~~~~~v~lElg 253 (476)
T cd07142 178 EQTPLSALLAAKLA----AEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLAAKSNLKPVTLELG 253 (476)
T ss_pred CcccHHHHHHHHHH----HHcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHHcCCCeEEEECC
Confidence 99999999888775 57899999999999965 57888887 89999999999999999999997 9999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|.++++++||++++.++
T Consensus 254 Gk~p~iV~~dADl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~ 333 (476)
T cd07142 254 GKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVGDPFRKGVEQGPQVDKEQF 333 (476)
T ss_pred CCCeeEECCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCcCcCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCC
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 321 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~g 321 (456)
+++.+++++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 334 ~~v~~~v~~a~~~Ga~v~~gg~~~----~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~g 409 (476)
T cd07142 334 EKILSYIEHGKEEGATLITGGDRI----GSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDEVIKRANNSKYG 409 (476)
T ss_pred HHHHHHHHHHHhCCCEEEecCCcC----CCCCeeEccEEeecCCCCChhhhCCccCceEEEEeeCCHHHHHHHHhCCCCC
Confidence 999999999999999999999742 2368999999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEE
Q 012790 322 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389 (456)
Q Consensus 322 L~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~ 389 (456)
|++||||+|.+.++++++++++|.|+||++.. ..+.+||||+|+||+|++||++|+++||+.|+++
T Consensus 410 L~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~ 475 (476)
T cd07142 410 LAAGVFSKNIDTANTLSRALKAGTVWVNCYDV--FDASIPFGGYKMSGIGREKGIYALNNYLQVKAVV 475 (476)
T ss_pred ceEEEECCCHHHHHHHHHhCCcceEEECCCCC--CCCCCCCCCCccCcCCccchHHHHHHhhheeEEe
Confidence 99999999999999999999999999998643 3456899999999999999999999999999985
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. |
| >TIGR01780 SSADH succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-84 Score=674.72 Aligned_cols=369 Identities=34% Similarity=0.560 Sum_probs=339.7
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|++..++++.... .+.. ..+...++.++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 76 a~~ev~~~~~~l~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKp 152 (448)
T TIGR01780 76 AKGEILYAASFLEWFAEEAKRVYGDT-IPSP--QSDKRLLVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKP 152 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcc-ccCC--CCCceeEEEEeeeeEEEEEcCCChHHHHHHHHHHHHHHcCCeEeeEC
Confidence 45689999999999998887764322 1111 12345578899999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCC-h-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-A-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 160 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~-~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lEl 160 (456)
|+.+|+++..+++++ .++|+|+|++|+|+|+ + +.++.|++ ++|.|+||||+.+|+.|++.++++++|+++||
T Consensus 153 s~~~p~~~~~l~~~~----~~aGlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~aa~~~~~~~lEl 228 (448)
T TIGR01780 153 AEQTPLSALALARLA----EQAGIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTGSTNVGKILMKQSASTVKKVSMEL 228 (448)
T ss_pred CccchHHHHHHHHHH----HHcCCCccceEEEeCCCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCceEeec
Confidence 999999999888876 4789999999999997 4 67888887 89999999999999999999999999999999
Q ss_pred CCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHH
Q 012790 161 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 240 (456)
Q Consensus 161 gGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~ 240 (456)
|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|.++++++||++++.+
T Consensus 229 GGk~~~iV~~dadl~~aa~~iv~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~ 308 (448)
T TIGR01780 229 GGNAPFIVFDDADIDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKA 308 (448)
T ss_pred CCCCeeEECCCCCHHHHHHHHHHHHHHhcCCcccCCceeechHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCC
Q 012790 241 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRY 320 (456)
Q Consensus 241 ~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~ 320 (456)
+++++++|++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|
T Consensus 309 ~~~v~~~i~~a~~~Ga~il~gg~~~----~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an~~~~ 384 (448)
T TIGR01780 309 VEKVEKHIADAVEKGAKVVTGGKRH----ELGGNFFEPTVLSNVTQDMLVAKEETFGPLAPVFKFDDEEEVIAIANDTEV 384 (448)
T ss_pred HHHHHHHHHHHHHCCCEEEeCCCcC----CCCCeeEcCEEEecCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCc
Confidence 9999999999999999999999731 235889999999999999999999999999999999999999999999999
Q ss_pred CceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceee
Q 012790 321 GLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVK 386 (456)
Q Consensus 321 gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k 386 (456)
||++||||+|.+.++++++++++|.|+||+.... .+.+||||+|+||+|+++|++|+++||+.|
T Consensus 385 gL~~~vfs~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k 448 (448)
T TIGR01780 385 GLAAYFFSRDLATIWRVAEALEYGMVGINTGLIS--NVVAPFGGVKQSGLGREGSKYGIEEYLETK 448 (448)
T ss_pred CceEEEECCCHHHHHHHHHhCCccEEEECCCCCC--CCCCCCCCcccccCCccchHHHHHHHhccC
Confidence 9999999999999999999999999999997543 345899999999999999999999999865
|
SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070). |
| >PLN02467 betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-83 Score=677.19 Aligned_cols=379 Identities=33% Similarity=0.498 Sum_probs=346.2
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++.++++.+....+..........+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 107 a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~Vv~Kp 186 (503)
T PLN02467 107 AAWDMDDVAGCFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKP 186 (503)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEecCceEEEECCCChHHHHHHHHHHHHHHcCCEEEEEC
Confidence 44699999999999999988764432111111111235789999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg 161 (456)
|+.+|.++..+++++ .++|+|+|++|+|+|++ +.++.|+. ++|.|+||||+.+|++|++++++++||+++|||
T Consensus 187 s~~tp~~~~~l~~~~----~eag~P~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~aa~~~~~~~lElG 262 (503)
T PLN02467 187 SELASVTCLELADIC----REVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATGRKIMTAAAQMVKPVSLELG 262 (503)
T ss_pred CCcCcHHHHHHHHHH----HHcCcCcCeEEEEeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhccCCcEEEECC
Confidence 999999999888876 47999999999999965 67888887 899999999999999999999999999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
||||+||++|||++.|++.|++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.++
T Consensus 263 G~~~~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~ 342 (503)
T PLN02467 263 GKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIASEFLEKLVKWAKNIKISDPLEEGCRLGPVVSEGQY 342 (503)
T ss_pred CCCceEECCCCCHHHHHHHHHHHHHhhcCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCC
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 321 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~g 321 (456)
+++.++|++++++|+++++||.... ....|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++||
T Consensus 343 ~~v~~~v~~a~~~Ga~vl~gG~~~~--~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~~~g 420 (503)
T PLN02467 343 EKVLKFISTAKSEGATILCGGKRPE--HLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTFSTEDEAIELANDSHYG 420 (503)
T ss_pred HHHHHHHHHHHHCCCEEEeCCCCCC--CCCCCeEEeeEEEeCCCCCChHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCC
Confidence 9999999999999999999997421 11358999999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEc
Q 012790 322 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 322 L~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~ 391 (456)
|++||||+|.+.++++++++++|.|+||++... ...+||||+|+||+|+++|++|+++||+.|++...
T Consensus 421 L~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~i~~~ 488 (503)
T PLN02467 421 LAGAVISNDLERCERVSEAFQAGIVWINCSQPC--FCQAPWGGIKRSGFGRELGEWGLENYLSVKQVTKY 488 (503)
T ss_pred ceEEEECCCHHHHHHHHHhCCcceEEECCCCCC--CCCCCcCCcccCcCCCcchHHHHHHhhCeEEEEEe
Confidence 999999999999999999999999999986432 34589999999999999999999999999999885
|
|
| >cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-83 Score=676.14 Aligned_cols=379 Identities=27% Similarity=0.400 Sum_probs=344.3
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|++...+ ++..+..+.. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 95 a~~ev~~~~~~~~~~~~~~~-~~~g~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKp 171 (478)
T cd07085 95 ARGDVLRGLEVVEFACSIPH-LLKGEYLENV--ARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFPMAIACGNTFVLKP 171 (478)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HhCCeecccC--CCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHhcCCEEEEEC
Confidence 45799999999999987664 3333322211 11345689999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgG 162 (456)
|+.+|+++..+++++. ++|+|+|++++|+|+.+.++.|++ ++|.|+||||+++|+.|+++++++++|+++||||
T Consensus 172 s~~tp~~~~~l~~~l~----~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~lElgG 247 (478)
T cd07085 172 SERVPGAAMRLAELLQ----EAGLPDGVLNVVHGGKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAANGKRVQALGGA 247 (478)
T ss_pred CCcCcHHHHHHHHHHH----HhCCCCCcEEEEecCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcCCcEEecCCC
Confidence 9999999988888764 689999999999997788888987 7999999999999999999999999999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHH
Q 012790 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 242 (456)
Q Consensus 163 k~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~ 242 (456)
|||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++++++
T Consensus 248 k~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~~~gpli~~~~~~ 327 (478)
T cd07085 248 KNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKLVERAKKLKVGAGDDPGADMGPVISPAAKE 327 (478)
T ss_pred CCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCc
Q 012790 243 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 322 (456)
Q Consensus 243 ~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL 322 (456)
++.++|++++++|+++++||.....+....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||
T Consensus 328 ~v~~~i~~a~~~Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL 407 (478)
T cd07085 328 RIEGLIESGVEEGAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAIINANPYGN 407 (478)
T ss_pred HHHHHHHHHHHCCCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCChhhhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCc
Confidence 99999999999999999999743221124689999999999999999999999999999999999999999999999999
Q ss_pred eeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCC--CcchHHHHhccceeeEEEEc
Q 012790 323 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG--RFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 323 ~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G--~~~g~~gl~~ft~~k~v~~~ 391 (456)
++||||+|.++++++++++++|.|+||++.. ...+.+||||+|+||+| +++|++|+++||+.|+|+..
T Consensus 408 ~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~-~~~~~~PfgG~k~SG~G~~~~~g~~~~~~~~~~k~v~~~ 477 (478)
T cd07085 408 GAAIFTRSGAAARKFQREVDAGMVGINVPIP-VPLAFFSFGGWKGSFFGDLHFYGKDGVRFYTQTKTVTSR 477 (478)
T ss_pred eEEEECCCHHHHHHHHHhCCcceEEEcCCCC-CCCCCCCCCCcccccCCCCcCChHHHHHHhcceEEEEEe
Confidence 9999999999999999999999999998743 33356899999999999 47899999999999999754
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. |
| >cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-83 Score=676.50 Aligned_cols=375 Identities=31% Similarity=0.487 Sum_probs=342.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecC
Q 012790 6 LGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 85 (456)
Q Consensus 6 ~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps 85 (456)
..|+..+++.++|+++.+++...+ .... ..+...+++++|+|||++|+|||||+.++++++++||++||+||+|||
T Consensus 97 ~~ev~~~~~~~~~~a~~~~~~~~~-~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~ALaaGN~VV~KPs 172 (480)
T cd07559 97 AADIPLAIDHFRYFAGVIRAQEGS-LSEI---DEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPALAAGNTVVLKPA 172 (480)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCc-cccC---CCCceeEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECc
Confidence 358999999999999887654221 1111 123456889999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCC
Q 012790 86 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162 (456)
Q Consensus 86 ~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgG 162 (456)
+.+|+++..+++++.+ + +|+|++|+|+|++ +.++.|++ ++|+|+||||+.+|++|++.++++++|+++||||
T Consensus 173 ~~tp~~~~~l~~l~~~----~-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~p~~lElGG 247 (480)
T cd07559 173 SQTPLSILVLMELIGD----L-LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAAENLIPVTLELGG 247 (480)
T ss_pred hhhhHHHHHHHHHHHH----h-CCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCcEEeccCC
Confidence 9999999999998764 3 9999999999965 77888887 8999999999999999999999999999999999
Q ss_pred cceEEEcCCC-----CHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccC
Q 012790 163 KDAFIVCDDV-----DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCL 237 (456)
Q Consensus 163 k~p~iV~~da-----Dl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~ 237 (456)
|||+||++|| |++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||+++
T Consensus 248 k~p~iV~~dA~~~~~Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~ 327 (480)
T cd07559 248 KSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYDEFIERAVERFEAIKVGNPLDPETMMGAQVS 327 (480)
T ss_pred CCeEEEcCCccccccCHHHHHHHHHHHHHhhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCcCCCCcC
Confidence 9999999999 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhc
Q 012790 238 LEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAND 317 (456)
Q Consensus 238 ~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~ 317 (456)
+++++++.++|++++++|+++++||.....+....|+|++|||+.++++||++++||+||||++|++|+|+||||+++|+
T Consensus 328 ~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~ 407 (480)
T cd07559 328 KDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKDEEEAIAIAND 407 (480)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcHHhcCCcCceEEEEeeCCHHHHHHHHhC
Confidence 99999999999999999999999997532111246899999999999999999999999999999999999999999999
Q ss_pred CCCCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEc
Q 012790 318 SRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 318 ~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~ 391 (456)
++|||++||||+|.+++.++++++++|.|+||+.... .+.+||||+|+||+|+++|++|+++||+.|+|+.+
T Consensus 408 ~~~gL~~~v~t~d~~~a~~~a~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~v~~~ 479 (480)
T cd07559 408 TEYGLGGGVWTRDINRALRVARGIQTGRVWVNCYHQY--PAHAPFGGYKKSGIGRETHKMMLDHYQQTKNILVS 479 (480)
T ss_pred CCCCCeEEEECCCHHHHHHHHHhcCcceEEECCCCCC--CCCCCcCCCccCcCCccChHHHHHHhhceEEEEEe
Confidence 9999999999999999999999999999999976432 34689999999999999999999999999998753
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. |
| >cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-83 Score=672.74 Aligned_cols=372 Identities=23% Similarity=0.352 Sum_probs=342.8
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCc--ccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEE
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGR--SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVI 82 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~Vvl 82 (456)
+..|+..+++.++|+++++++|.+... +... ...+...+++++|+|||++|+|||||+.++++++++||++||+||+
T Consensus 79 a~~ev~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vvl 157 (455)
T cd07148 79 AKVEVTRAIDGVELAADELGQLGGREI-PMGLTPASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIV 157 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCccc-ccccccCCCCceEEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEe
Confidence 456999999999999999988865422 1111 0123456899999999999999999999999999999999999999
Q ss_pred ecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccC
Q 012790 83 KVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 160 (456)
Q Consensus 83 Kps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lEl 160 (456)
|||+.+|+++.++++++. ++|+|+|++++|+|+.+.++.|+. ++|+|+||||+++|+.|+++++. .+|+++||
T Consensus 158 Kps~~~p~~~~~l~~~~~----~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~v~fTGs~~~G~~i~~~aa~-~~~~~lEl 232 (455)
T cd07148 158 KPALATPLSCLAFVDLLH----EAGLPEGWCQAVPCENAVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAP-GTRCALEH 232 (455)
T ss_pred eCCCcccHHHHHHHHHHH----HcCCCcCcEEEEeCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhc-CCcEEEec
Confidence 999999999998888765 689999999999998788888986 99999999999999999999886 49999999
Q ss_pred CCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHH
Q 012790 161 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 240 (456)
Q Consensus 161 gGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~ 240 (456)
|||||+||++|||++.|++.|++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+
T Consensus 233 GG~~p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~ 312 (455)
T cd07148 233 GGAAPVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPRE 312 (455)
T ss_pred CCCCceEECCCCCHHHHHHHHHHHHHhcCCCCccCCeEEEEcHhHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCcCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCC
Q 012790 241 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRY 320 (456)
Q Consensus 241 ~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~ 320 (456)
+++++++|++++++|+++++||.. ..++|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|
T Consensus 313 ~~~~~~~i~~a~~~Ga~vl~gg~~------~~~~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~ 386 (455)
T cd07148 313 VDRVEEWVNEAVAAGARLLCGGKR------LSDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPV 386 (455)
T ss_pred HHHHHHHHHHHHhCCCEEEeCCcc------CCCCeEcCEEEeCCCCCCHHHhCCCcCCeEEEEecCCHHHHHHHHhCCCC
Confidence 999999999999999999999973 24789999999999999999999999999999999999999999999999
Q ss_pred CceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEE
Q 012790 321 GLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389 (456)
Q Consensus 321 gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~ 389 (456)
||++||||+|.+.++++++++++|.|+||+.... ..+.+||||+|+||+|+++|++|+++||+.|++.
T Consensus 387 gL~a~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~-~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~ 454 (455)
T cd07148 387 AFQAAVFTKDLDVALKAVRRLDATAVMVNDHTAF-RVDWMPFAGRRQSGYGTGGIPYTMHDMTQEKMAV 454 (455)
T ss_pred CceEEEEcCCHHHHHHHHHHcCcCeEEECCCCCC-CCCCCCCCcchhcccCCCchHHHHHHhhceeEEe
Confidence 9999999999999999999999999999987533 2345899999999999999999999999999985
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-83 Score=678.74 Aligned_cols=377 Identities=29% Similarity=0.495 Sum_probs=345.6
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++.+++++..+..+.+ ....+++++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 95 a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKp 170 (488)
T TIGR02299 95 TRQQVIRAAENFRFFADKCEEAMDGRTYPVD----THLNYTVRVPVGPVGLITPWNAPFMLSTWKIAPALAFGNTVVLKP 170 (488)
T ss_pred HHHHHHHHHHHHHHHHHhHHHhcCCccccCC----CceEEEEEEecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEEC
Confidence 3479999999999999999877655433322 234678999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg 161 (456)
|+.+|.++.++.+++ .++|+|+|++|+|+|++ +.++.|+. .+|.|+||||+++|+.|++.++++++|+++|||
T Consensus 171 s~~~p~~~~~l~~~~----~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~aa~~l~~~~lElG 246 (488)
T TIGR02299 171 AEWSPLTAARLAEIA----KEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGADTLKRFSMELG 246 (488)
T ss_pred chhchHHHHHHHHHH----HHcCcChhheeEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCCeEEEEcC
Confidence 999999988877765 57999999999999854 67788886 899999999999999999999999999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||+++++++
T Consensus 247 Gknp~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~ 326 (488)
T TIGR02299 247 GKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEKLVERVRAIRVGHPLDPETEVGPLIHPEHL 326 (488)
T ss_pred CCCeEEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCCcCCCCCCCCCCCCCcCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCC---CCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcC
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHL---SEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDS 318 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~---~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~ 318 (456)
+++.++|++++++|+++++||..... .....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|++
T Consensus 327 ~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~ 406 (488)
T TIGR02299 327 AKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDEEEAIEKANDT 406 (488)
T ss_pred HHHHHHHHHHHhCCCEEEeCCccCcccccccCCCCeEEccEEEecCCCCCchhhCCCcCCeEEEEeeCCHHHHHHHHhCC
Confidence 99999999999999999999974211 001258899999999999999999999999999999999999999999999
Q ss_pred CCCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEc
Q 012790 319 RYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 319 ~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~ 391 (456)
+|||++||||+|.+.++++++++++|.|+||+.... .+.+||||+|+||+|+++|++|+++||+.|+|+.+
T Consensus 407 ~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~i~~~ 477 (488)
T TIGR02299 407 RYGLAGYVWTNDVGRAHRVALALEAGMIWVNSQNVR--HLPTPFGGVKASGIGREGGTYSFDFYTETKNVALA 477 (488)
T ss_pred CCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCC--CCCCCCCCCccCcCCccchHHHHHHHhceEEEEEe
Confidence 999999999999999999999999999999987543 34589999999999999999999999999999875
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. |
| >cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-83 Score=676.07 Aligned_cols=375 Identities=28% Similarity=0.454 Sum_probs=345.0
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++.++++..+.. +.. ..+...++.++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 94 a~~ev~~~~~~l~~~a~~~~~~~g~~~-~~~--~~~~~~~~~~~P~GVv~~I~P~N~Pl~~~~~~i~~ALaaGN~VIlKp 170 (473)
T cd07097 94 ARGEVTRAGQIFRYYAGEALRLSGETL-PST--RPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAPALAYGNTVVFKP 170 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCccc-ccC--CCCceEEEEEEeeeeEEEEcccChHHHHHHHHHHHHHHcCCEEEEeC
Confidence 456999999999999998887754321 111 12345689999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg 161 (456)
|+.+|.++.++++++ .++|+|+|++|+|+|++ +.+..|++ ++|+|+||||+.+|+.|++.++++++|+++|||
T Consensus 171 s~~~p~~~~~l~~~~----~~aGlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lElG 246 (473)
T cd07097 171 AELTPASAWALVEIL----EEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAAARGARVQLEMG 246 (473)
T ss_pred CCCCcHHHHHHHHHH----HHcCCCCcceEEeccCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCcEEEECC
Confidence 999999999888875 47899999999999975 67888887 899999999999999999999999999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.++
T Consensus 247 Gk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~ 326 (473)
T cd07097 247 GKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALVERTKALKVGDALDEGVDIGPVVSERQL 326 (473)
T ss_pred CCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCeeEEEehhHHHHHHHHHHHHHHhCCCCCCCCCCCcCCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCC
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 321 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~g 321 (456)
+++.++|++++++|+++++||...+. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 327 ~~v~~~i~~a~~~Ga~v~~gg~~~~~--~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~g 404 (473)
T cd07097 327 EKDLRYIEIARSEGAKLVYGGERLKR--PDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALAIANDTEFG 404 (473)
T ss_pred HHHHHHHHHHHHCCCEEEeCCccCCC--CCCCeEEeeEEeccCCCCChhhhCCCcCceEEEeccCCHHHHHHHHhCCCCC
Confidence 99999999999999999999974221 1358899999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCC-CcchHHHHhccceeeEEE
Q 012790 322 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKSVV 389 (456)
Q Consensus 322 L~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G-~~~g~~gl~~ft~~k~v~ 389 (456)
|++||||+|.+.++++++++++|.|+||+...+. .+.+||||+|.||+| ++||++|+++||+.|+|.
T Consensus 405 L~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~~~~-~~~~PfGG~~~SG~G~~~~g~~~l~~f~~~k~v~ 472 (473)
T cd07097 405 LSAGIVTTSLKHATHFKRRVEAGVVMVNLPTAGV-DYHVPFGGRKGSSYGPREQGEAALEFYTTIKTVY 472 (473)
T ss_pred ceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCC-CCCCCCCCcccccCcccCCcHHHHHHhhceeEEe
Confidence 9999999999999999999999999999865443 346899999999999 899999999999999985
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. |
| >cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-83 Score=672.41 Aligned_cols=377 Identities=30% Similarity=0.487 Sum_probs=344.9
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++.++++........+....+...+++++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 76 a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kp 155 (456)
T cd07110 76 AAWDVDDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKP 155 (456)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCccccCCCCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEEC
Confidence 34699999999999999998874321111111112345789999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg 161 (456)
|+.+|+++..+++++. ++|+|+|++++|+|++ +.++.|++ ++|+|+||||+.+|+.|+++++++++|+++|||
T Consensus 156 s~~~p~~~~~l~~~~~----~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~aa~~~~~~~lElg 231 (456)
T cd07110 156 SELTSLTELELAEIAA----EAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQDIKPVSLELG 231 (456)
T ss_pred cccchHHHHHHHHHHH----HcCCCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCeEEEEcC
Confidence 9999999998888765 7899999999999965 57888887 799999999999999999999999999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
||||+||++|||++.|++.|++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.++
T Consensus 232 G~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~ 311 (456)
T cd07110 232 GKSPIIVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQY 311 (456)
T ss_pred CCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCC
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 321 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~g 321 (456)
+++++++++++++|+++++||..... ...|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++||
T Consensus 312 ~~~~~~v~~a~~~Ga~~~~gg~~~~~--~~~~~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~g 389 (456)
T cd07110 312 EKVLSFIARGKEEGARLLCGGRRPAH--LEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSEYG 389 (456)
T ss_pred HHHHHHHHHHHhCCCEEEeCCCcccc--cCCCCcCCCEEEecCCCCChHhhCCCcCCeEEEEecCCHHHHHHHHhCCCCC
Confidence 99999999999999999999974211 1458899999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEE
Q 012790 322 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389 (456)
Q Consensus 322 L~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~ 389 (456)
|++||||+|.+.++++++++++|.|+||+... ..+.+||||+|+||+|+++|++|+++||+.|+++
T Consensus 390 L~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~ 455 (456)
T cd07110 390 LAAAVISRDAERCDRVAEALEAGIVWINCSQP--CFPQAPWGGYKRSGIGRELGEWGLDNYLEVKQIT 455 (456)
T ss_pred ceEEEECCCHHHHHHHHHhCCcceEEECCCCC--CCCCCCCCCcccccCCccchHHHHHHhcceeEEe
Confidence 99999999999999999999999999998643 2456899999999999999999999999999985
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. |
| >cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-83 Score=676.26 Aligned_cols=373 Identities=30% Similarity=0.493 Sum_probs=344.3
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEe
Q 012790 4 ASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIK 83 (456)
Q Consensus 4 ~~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlK 83 (456)
+...|+..+++.++|+++.++++.... .+.. .....+++++|+|||++|+|||||+.++++++++||++||+||+|
T Consensus 104 ~~~~ev~~~~~~l~~~a~~~~~~~g~~-~~~~---~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlK 179 (481)
T cd07141 104 SYLVDLPGAIKVLRYYAGWADKIHGKT-IPMD---GDFFTYTRHEPVGVCGQIIPWNFPLLMAAWKLAPALACGNTVVLK 179 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCce-ecCC---CCceEEEEEeceeEEEEEccChhHHHHHHHHHHHHHHcCCEEEEe
Confidence 345699999999999999988875432 1111 123467899999999999999999999999999999999999999
Q ss_pred cCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhc-cCCccccc
Q 012790 84 VSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASK-TLTPVTLE 159 (456)
Q Consensus 84 ps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~-~~~pv~lE 159 (456)
||+.+|+++..+++++ .++|+|+|++|+|+|++ +.+..|+. ++|.|+||||+.+|+.|++.+++ +++|+++|
T Consensus 180 ps~~~p~~~~~l~~~l----~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~~~lE 255 (481)
T cd07141 180 PAEQTPLTALYLASLI----KEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQQAAGKSNLKRVTLE 255 (481)
T ss_pred CCCCCcHHHHHHHHHH----HHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhhhcCceEEEE
Confidence 9999999998888775 47899999999999965 66788887 89999999999999999999987 89999999
Q ss_pred CCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHH
Q 012790 160 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLE 239 (456)
Q Consensus 160 lgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~ 239 (456)
||||||+||++|||++.|++.|++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||++++.
T Consensus 256 lGG~~~~iV~~dADl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~ 335 (481)
T cd07141 256 LGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIYDEFVKRSVERAKKRVVGNPFDPKTEQGPQIDEE 335 (481)
T ss_pred cCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCcCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCC
Q 012790 240 HSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSR 319 (456)
Q Consensus 240 ~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~ 319 (456)
+++++.++|++++++|+++++||... +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++
T Consensus 336 ~~~~~~~~i~~a~~~Ga~v~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~ 411 (481)
T cd07141 336 QFKKILELIESGKKEGAKLECGGKRH----GDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTIDEVIERANNTT 411 (481)
T ss_pred HHHHHHHHHHHHHHCCCEEEeCCCcC----CCCCeEEeeEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCC
Confidence 99999999999999999999999742 24689999999999999999999999999999999999999999999999
Q ss_pred CCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEE
Q 012790 320 YGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 390 (456)
Q Consensus 320 ~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~ 390 (456)
|||++||||+|.+++.++++++++|.|+||++.. ..+.+||||+|.||+|+++|++|+++||+.|+++.
T Consensus 412 ~gLs~~vft~d~~~a~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~~ 480 (481)
T cd07141 412 YGLAAAVFTKDIDKAITFSNALRAGTVWVNCYNV--VSPQAPFGGYKMSGNGRELGEYGLQEYTEVKTVTI 480 (481)
T ss_pred ccceEEEECCCHHHHHHHHHhcCcCeEEECCCCC--CCCCCCCCCcccCcCCccchHHHHHHHhheEEEEE
Confidence 9999999999999999999999999999998643 34568999999999999999999999999999865
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. |
| >cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-83 Score=666.69 Aligned_cols=378 Identities=34% Similarity=0.556 Sum_probs=346.6
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEE
Q 012790 3 DASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVI 82 (456)
Q Consensus 3 ~~~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~Vvl 82 (456)
|+...|+..+++.++|++++++++++++....+....+...+++++|+|||++|+|||||+.++++++++||++||+||+
T Consensus 55 ea~~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvl 134 (434)
T cd07133 55 ETLLAEILPSIAGIKHARKHLKKWMKPSRRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMI 134 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcccCCccccCCCceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEE
Confidence 34456999999999999999999887654332221224457899999999999999999999999999999999999999
Q ss_pred ecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh-ccCEEEecCCHHHHHHHHHHhhccCCcccccCC
Q 012790 83 KVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 83 Kps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~-~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg 161 (456)
|||+.+|.++.++.+++.+ + +|+|++++|+|+.+.++.|++ .+|.|+||||+.+|+.|++.++++++|+++|||
T Consensus 135 Kps~~~p~~~~~l~~l~~~----a-lP~g~~~~v~g~~~~~~~l~~~~v~~V~ftGs~~~g~~v~~~aa~~~~~~~lElg 209 (434)
T cd07133 135 KPSEFTPRTSALLAELLAE----Y-FDEDEVAVVTGGADVAAAFSSLPFDHLLFTGSTAVGRHVMRAAAENLTPVTLELG 209 (434)
T ss_pred ECCCcChHHHHHHHHHHHH----h-CCcCeEEEEeCChHHHHHHHhCCCCEEEEeCchHHHHHHHHHHHhcCceEEEEcc
Confidence 9999999999988888764 3 899999999997788888888 999999999999999999999999999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+ +.++++||+++++++
T Consensus 210 Gk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~--~~~~~~gpli~~~~~ 287 (434)
T cd07133 210 GKSPAIIAPDADLAKAAERIAFGKLLNAGQTCVAPDYVLVPEDKLEEFVAAAKAAVAKMYPTL--ADNPDYTSIINERHY 287 (434)
T ss_pred CCCcEEEeCCCCHHHHHHHHHHHHhccCCCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCC--CCCCCcCCCCCHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999886 467799999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCC
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 321 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~g 321 (456)
++++++|++++++|+++++||.... ....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 288 ~~v~~~i~~a~~~Ga~v~~gg~~~~--~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~g 365 (434)
T cd07133 288 ARLQGLLEDARAKGARVIELNPAGE--DFAATRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRP 365 (434)
T ss_pred HHHHHHHHHHHhCCCEEEecCCCCc--CCCCCcEEeeEEEeCCCCCCcccccccCCCeeEEEEeCCHHHHHHHHhCCCCC
Confidence 9999999999999999999987421 11368999999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEE
Q 012790 322 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389 (456)
Q Consensus 322 L~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~ 389 (456)
|++||||+|.+.++++++++++|.|+||++..+...+.+||||+|.||+|+++|.+|+++||+.|+|+
T Consensus 366 L~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~ 433 (434)
T cd07133 366 LALYYFGEDKAEQDRVLRRTHSGGVTINDTLLHVAQDDLPFGGVGASGMGAYHGKEGFLTFSHAKPVF 433 (434)
T ss_pred ceEEEECCCHHHHHHHHHhCCcceEEECCcccccCCCCCCcCCCCcccCCCcCCHHHHHHhcccceec
Confidence 99999999999999999999999999999765555567999999999999999999999999999974
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. |
| >cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-83 Score=675.50 Aligned_cols=378 Identities=32% Similarity=0.508 Sum_probs=346.5
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++.+++... +..+.. .+...+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 94 a~~ev~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~VilKp 169 (482)
T cd07119 94 SEIDIDDVANCFRYYAGLATKETG-EVYDVP---PHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPALAAGNTVVIKP 169 (482)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC-ccccCC---CCceEEEEEeeeeeEEEEcCCchHHHHHHHHHHHHHhcCCEEEEEC
Confidence 456999999999999999877432 222211 2345789999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg 161 (456)
|+.+|.++.++++++. ++|+|+|++++|+|++ +.++.|++ ++|+|+||||+++|+.|+++++++++|+++|||
T Consensus 170 s~~~p~~~~~l~~~~~----~aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~lElG 245 (482)
T cd07119 170 SEVTPLTTIALFELIE----EAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAGNVKKVALELG 245 (482)
T ss_pred CccccHHHHHHHHHHH----HcCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECC
Confidence 9999999998888764 7899999999999976 57888887 899999999999999999999999999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.++
T Consensus 246 Gkn~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~gpli~~~~~ 325 (482)
T cd07119 246 GKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAERAKKIKLGNGLDADTEMGPLVSAEHR 325 (482)
T ss_pred CCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCC
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 321 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~g 321 (456)
+++++++++++++|+++++||..........|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 326 ~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~~n~~~~g 405 (482)
T cd07119 326 EKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLANDTPYG 405 (482)
T ss_pred HHHHHHHHHHHHCCCEEEeCCcccccccCCCCceECCEEEecCCCCChHhhCCCCCceEEEeccCCHHHHHHHHhCCCCC
Confidence 99999999999999999999974221112358999999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEcc
Q 012790 322 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 322 L~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~ 392 (456)
|++||||+|.+.++++++++++|.|+||+.... .+.+||||+|+||+|++||++|+++||+.|+++.+.
T Consensus 406 L~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~~~~ 474 (482)
T cd07119 406 LAGAVWTKDIARANRVARRLRAGTVWINDYHPY--FAEAPWGGYKQSGIGRELGPTGLEEYQETKHININL 474 (482)
T ss_pred ceEEEECCCHHHHHHHHHhcCcceEEECCCCCC--CCCCCcCCcccCcCCccchHHHHHHHhceEEEEEec
Confidence 999999999999999999999999999986443 356899999999999999999999999999998753
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. |
| >cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-83 Score=669.39 Aligned_cols=374 Identities=30% Similarity=0.430 Sum_probs=343.6
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++.+++..... ... ..+...+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 77 a~~Ev~~~i~~l~~~~~~~~~~~g~~-~~~---~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKp 152 (455)
T cd07120 77 ARFEISGAISELRYYAGLARTEAGRM-IEP---EPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKP 152 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcc-ccc---CCCceEEEEEecceeEEEECCCchHHHHHHHHHHHHHHcCCEEEeEC
Confidence 44699999999999999887754321 111 11345689999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHH-cCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccC
Q 012790 85 SENASWSGCFYFRIIQAALAA-VGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 160 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~-aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lEl 160 (456)
|+.+|.++..+++++. + +|+|+|++|+|+|++ +.++.|++ ++|.|+||||+.+|+.|++.++++++|+++|+
T Consensus 153 s~~~~~~~~~l~~~~~----~aag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lEl 228 (455)
T cd07120 153 AGQTAQINAAIIRILA----EIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAPTLKRLGLEL 228 (455)
T ss_pred CCCChHHHHHHHHHHH----HhcCCCccceEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEEC
Confidence 9999999998888865 5 699999999999865 67888887 89999999999999999999999999999999
Q ss_pred CCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHH
Q 012790 161 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 240 (456)
Q Consensus 161 gGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~ 240 (456)
|||||+||++|||++.|++.|++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++++
T Consensus 229 GG~~~~IV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~ 308 (455)
T cd07120 229 GGKTPCIVFDDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDRAN 308 (455)
T ss_pred CCCCeeEECCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCCcCCccCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCC
Q 012790 241 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRY 320 (456)
Q Consensus 241 ~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~ 320 (456)
++++++++++++++|+++++||...+.. ...|+|++|||+.++++||++++||+||||++|++|+|+||||+++|+++|
T Consensus 309 ~~~~~~~i~~a~~~ga~~~~~g~~~~~~-~~~g~~~~Ptvl~~~~~d~~i~~~E~FgPvl~v~~~~~~deai~~~n~~~~ 387 (455)
T cd07120 309 VDRVDRMVERAIAAGAEVVLRGGPVTEG-LAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDTDY 387 (455)
T ss_pred HHHHHHHHHHHHHCCCEEEeCCccCccc-CCCCceECCEEEecCCCCChhhhCcCcCceEEEeecCCHHHHHHHHhCCCC
Confidence 9999999999999999999988642211 136899999999999999999999999999999999999999999999999
Q ss_pred CceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEE
Q 012790 321 GLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389 (456)
Q Consensus 321 gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~ 389 (456)
||++||||+|.+.++++++++++|.|+||++... .+.+||||+|+||+|++||++|+++||+.|+|+
T Consensus 388 gLs~~ift~d~~~a~~~~~~l~~G~v~iN~~~~~--~~~~pfGG~k~SG~G~~~g~~~l~~ft~~k~v~ 454 (455)
T cd07120 388 GLAASVWTRDLARAMRVARAIRAGTVWINDWNKL--FAEAEEGGYRQSGLGRLHGVAALEDFIEYKHIY 454 (455)
T ss_pred CceEEEEcCCHHHHHHHHHhcCcceEEECCCCCC--CCCCCcCCccccccCccchHHHHHHHhceeEEe
Confidence 9999999999999999999999999999997653 345899999999999999999999999999985
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. |
| >cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-83 Score=664.42 Aligned_cols=372 Identities=30% Similarity=0.492 Sum_probs=342.1
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecC
Q 012790 6 LGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 85 (456)
Q Consensus 6 ~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps 85 (456)
..|+..+++.++|+++.+.++..++....+....+...++.++|+|||++|+|||||+.++++++++||++||+||+|||
T Consensus 58 ~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps 137 (432)
T cd07137 58 RDEVSVLVSSCKLAIKELKKWMAPEKVKTPLTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPS 137 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcccCCCcccCCceeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECC
Confidence 35999999999999999988876543211111123456889999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh-ccCEEEecCCHHHHHHHHHHhhccCCcccccCCCcc
Q 012790 86 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD 164 (456)
Q Consensus 86 ~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~-~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgGk~ 164 (456)
+.+|.++.++++++.+ ++|+|++|+|+|+.+.+..|++ .+|+|+||||+.+|++|++.++++++|+++||||||
T Consensus 138 ~~tp~~~~~l~~~~~~-----~~P~gvv~~v~g~~~~~~~L~~~~i~~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~n 212 (432)
T cd07137 138 ELAPATSALLAKLIPE-----YLDTKAIKVIEGGVPETTALLEQKWDKIFFTGSPRVGRIIMAAAAKHLTPVTLELGGKC 212 (432)
T ss_pred CcChHHHHHHHHHHHH-----hCCcCeEEEEeCCHHHHHHHHhCCCCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCC
Confidence 9999999999998764 3999999999997788889998 899999999999999999999999999999999999
Q ss_pred eEEEcCCCCHHHHHHHHHHHHh-hCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHHH
Q 012790 165 AFIVCDDVDVPHVAQIAVRAAL-QSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEK 243 (456)
Q Consensus 165 p~iV~~daDl~~aa~~i~~~~~-~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~ 243 (456)
|+||++|||++.|++.+++++| .|+||.|++++|+|||++++|+|+++|.++++++++|+| ++++++||++++.++++
T Consensus 213 p~iV~~dAdl~~aa~~i~~~~f~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~ 291 (432)
T cd07137 213 PVIVDSTVDLKVAVRRIAGGKWGCNNGQACIAPDYVLVEESFAPTLIDALKNTLEKFFGENP-KESKDLSRIVNSHHFQR 291 (432)
T ss_pred cEEEcCCCCHHHHHHHHHHHhhhccCCCcccCCCEEEEcHHHHHHHHHHHHHHHHHHhCCCC-CccCCcCCcCCHHHHHH
Confidence 9999999999999999999999 599999999999999999999999999999999999999 46889999999999999
Q ss_pred HHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCce
Q 012790 244 LQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLG 323 (456)
Q Consensus 244 v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~ 323 (456)
+.++|+++++ |+++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+
T Consensus 292 v~~~i~~a~~-ga~~l~gg~~-----~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~ 365 (432)
T cd07137 292 LSRLLDDPSV-ADKIVHGGER-----DEKNLYIEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLA 365 (432)
T ss_pred HHHHHHHHHh-CCeEEeCCCc-----CCCCCEEeeEEEecCCCcchhhhcccccCceEEEEeCCHHHHHHHHhcCCCCcE
Confidence 9999999988 8999999863 236899999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEE
Q 012790 324 CAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389 (456)
Q Consensus 324 ~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~ 389 (456)
+||||+|.+.++++++++++|.|+||+...+...+.+||||+|.||+|+++|.+++++||+.|+|+
T Consensus 366 a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~f~~~k~v~ 431 (432)
T cd07137 366 AYVFTKNKELKRRIVAETSSGGVTFNDTVVQYAIDTLPFGGVGESGFGAYHGKFSFDAFSHKKAVL 431 (432)
T ss_pred EEEECCCHHHHHHHHHhCCcCcEEECCccccccCCCCCCCCcCcCcCCccccHHHHHHhccCceee
Confidence 999999999999999999999999998765444456899999999999999999999999999875
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. |
| >cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-83 Score=670.33 Aligned_cols=373 Identities=35% Similarity=0.563 Sum_probs=342.3
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCc--ccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEE
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGR--SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVI 82 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~Vvl 82 (456)
+..|+..+++.++|+++.++ ++.++..+... .......+++++|+|||++|+|||||+.+.++++++||++||+||+
T Consensus 78 a~~ev~~~~~~l~~~a~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~ 156 (456)
T cd07145 78 SRVEVERTIRLFKLAAEEAK-VLRGETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVV 156 (456)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HhcCccccCccccccCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEE
Confidence 45699999999999998876 44433222111 0112356789999999999999999999999999999999999999
Q ss_pred ecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCccccc
Q 012790 83 KVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLE 159 (456)
Q Consensus 83 Kps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lE 159 (456)
|||+.+|.++.++++++. ++|+|+|++++|+|++ +.++.|++ ++|+|+||||+.+|+.|++.++++++|+++|
T Consensus 157 Kps~~~p~~~~~l~~~~~----~ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~v~lE 232 (456)
T cd07145 157 KPSSNTPLTAIELAKILE----EAGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGTGKKVALE 232 (456)
T ss_pred ECCccchHHHHHHHHHHH----HcCCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCceEEe
Confidence 999999999988888765 6899999999999965 67888887 8999999999999999999999999999999
Q ss_pred CCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHH
Q 012790 160 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLE 239 (456)
Q Consensus 160 lgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~ 239 (456)
||||||+||++|||++.|++.|++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.
T Consensus 233 lgG~n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~ 312 (456)
T cd07145 233 LGGSDPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPE 312 (456)
T ss_pred cCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCccCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCcCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCC
Q 012790 240 HSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSR 319 (456)
Q Consensus 240 ~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~ 319 (456)
++++++++|++++++|+++++||.. ..|+|++|||+++++++|++++||+||||++|++|+|+||||+++|+++
T Consensus 313 ~~~~~~~~i~~a~~~ga~vl~gg~~------~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~ 386 (456)
T cd07145 313 AVERMENLVNDAVEKGGKILYGGKR------DEGSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTE 386 (456)
T ss_pred HHHHHHHHHHHHHHCCCEEEeCCCC------CCCeEECCEeecCCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCC
Confidence 9999999999999999999999973 2389999999999999999999999999999999999999999999999
Q ss_pred CCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEE
Q 012790 320 YGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389 (456)
Q Consensus 320 ~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~ 389 (456)
|||++||||+|.+.+.++++++++|.|+||+.... ..+.+||||+|+||+|++||++||++||+.|+|.
T Consensus 387 ~gL~~~v~t~d~~~~~~~~~~~~~g~v~vN~~~~~-~~~~~pfgG~~~SG~G~~~g~~~l~~f~~~k~v~ 455 (456)
T cd07145 387 YGLQASVFTNDINRALKVARELEAGGVVINDSTRF-RWDNLPFGGFKKSGIGREGVRYTMLEMTEEKTIV 455 (456)
T ss_pred CCceEEEECCCHHHHHHHHHhCCcceEEECCCCCC-CCCCCCCCCcccccCCcCchHHHHHHhhceeEEe
Confidence 99999999999999999999999999999987543 2346899999999999999999999999999985
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. |
| >cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-83 Score=669.51 Aligned_cols=376 Identities=32% Similarity=0.503 Sum_probs=346.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhCCcccCCCc-ccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 6 LGEIMTTCEKITWLLSEGEKWLKPEYRSSGR-SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 6 ~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
..|+..+++.++|+++++++|..++..+... ...+...+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 79 ~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKp 158 (459)
T cd07089 79 AMQVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKP 158 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEEC
Confidence 4599999999999999999886654332211 112456789999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg 161 (456)
|+.+|.++..+.+++. ++|+|+|++++|+|++ +.+..|++ ++|.|+||||+.+|+.|++.++++++|+++|+|
T Consensus 159 s~~~p~~~~~l~~~~~----~aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~~~g~~v~~~aa~~~~~~~lelg 234 (459)
T cd07089 159 APDTPLSALLLGEIIA----ETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAATLKRVLLELG 234 (459)
T ss_pred CCCChHHHHHHHHHHH----HcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECC
Confidence 9999999988887765 6899999999999976 56888886 899999999999999999999999999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
||||+||++|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++++++
T Consensus 235 G~n~~iV~~dadl~~aa~~i~~~~~~~sGQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~i~~~~~ 314 (459)
T cd07089 235 GKSANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQR 314 (459)
T ss_pred CCCeeEECCCCCHHHHHHHHHHHHHHhcCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCC
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 321 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~g 321 (456)
+++++++++++++|+++++||..... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 315 ~~v~~~i~~a~~~Ga~~l~gg~~~~~--~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~g 392 (459)
T cd07089 315 DRVEGYIARGRDEGARLVTGGGRPAG--LDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYG 392 (459)
T ss_pred HHHHHHHHHHHHCCCEEEeCCCcCCC--CCCCeEECCEEEEcCCCCCHHHhCCCcCceEEEeccCCHHHHHHHHhCCCCC
Confidence 99999999999999999999974211 1368999999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEE
Q 012790 322 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389 (456)
Q Consensus 322 L~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~ 389 (456)
|++||||+|.+.++++++++++|.|+||+... ..+.+||||+|+||+|++||++|+++||+.|+|.
T Consensus 393 L~~~v~t~d~~~~~~~~~~~~~G~v~iN~~~~--~~~~~PfgG~k~SG~G~~~g~~~l~~ft~~k~v~ 458 (459)
T cd07089 393 LSGGVWSADVDRAYRVARRIRTGSVGINGGGG--YGPDAPFGGYKQSGLGRENGIEGLEEFLETKSIA 458 (459)
T ss_pred CeEEEEcCCHHHHHHHHHhcCcCeEEECCCCC--CCCCCCcCCcccccCCCCchHHHHHHhhceeEEe
Confidence 99999999999999999999999999998753 2455899999999999999999999999999985
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. |
| >cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-83 Score=669.57 Aligned_cols=371 Identities=33% Similarity=0.520 Sum_probs=340.3
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++..+++. .+..+.. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 89 a~~Ev~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kp 165 (465)
T cd07151 89 ANIEWGAAMAITREAATFPLRME-GRILPSD--VPGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPALALGNAVVLKP 165 (465)
T ss_pred HHHHHHHHHHHHHHHHHhHHHhc-CccccCC--CCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEEC
Confidence 34699999999999998776542 2221111 12345688999999999999999999999999999999999999999
Q ss_pred CCCChhHH-HHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccC
Q 012790 85 SENASWSG-CFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 160 (456)
Q Consensus 85 s~~~p~~~-~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lEl 160 (456)
|+.+|.++ .++.++ |.++|+|+|++|+|+|++ +.+..|++ .+|+|+||||+.+|+.|+++++++++|++|||
T Consensus 166 s~~~p~~~~~~l~~~----l~~aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lEl 241 (465)
T cd07151 166 ASDTPITGGLLLAKI----FEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGRHLKKVALEL 241 (465)
T ss_pred CCCCcHhHHHHHHHH----HHHcCcCccceEEEecCchhhHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEEC
Confidence 99999986 455554 568999999999999864 67888887 79999999999999999999999999999999
Q ss_pred CCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHH
Q 012790 161 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 240 (456)
Q Consensus 161 gGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~ 240 (456)
|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++++
T Consensus 242 GGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~ 321 (465)
T cd07151 242 GGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKFVERVKALPYGDPSDPDTVVGPLINESQ 321 (465)
T ss_pred CCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCC
Q 012790 241 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRY 320 (456)
Q Consensus 241 ~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~ 320 (456)
++++++++++++++|+++++||. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|
T Consensus 322 ~~~v~~~v~~a~~~ga~vl~gg~-------~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~ 394 (465)
T cd07151 322 VDGLLDKIEQAVEEGATLLVGGE-------AEGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEY 394 (465)
T ss_pred HHHHHHHHHHHHhCCCEEEecCC-------cCCEEEccEEEeCCCCCCchhhCcCcCCeEEEEeeCCHHHHHHHHhCCCc
Confidence 99999999999999999999986 25889999999999999999999999999999999999999999999999
Q ss_pred CceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEE
Q 012790 321 GLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 390 (456)
Q Consensus 321 gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~ 390 (456)
||++||||+|.++++++++++++|.|+||+++.+. .+.+||||+|+||+|++||++||++||+.|+++.
T Consensus 395 gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~-~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~~~~ 463 (465)
T cd07151 395 GLSGAVFTSDLERGVQFARRIDAGMTHINDQPVND-EPHVPFGGEKNSGLGRFNGEWALEEFTTDKWISV 463 (465)
T ss_pred cceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCC-CCCCCCCCcccccCCcCChHHHHHHhhceEEEEe
Confidence 99999999999999999999999999999986543 3568999999999999999999999999999875
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. |
| >cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-83 Score=668.11 Aligned_cols=377 Identities=32% Similarity=0.508 Sum_probs=345.6
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++.+++. ..+..+.+ .+...+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 76 a~~ev~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kp 151 (457)
T cd07090 76 ARVDIDSSADCLEYYAGLAPTL-SGEHVPLP---GGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKP 151 (457)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-CCeeeccC---CCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCeeeecC
Confidence 4579999999999999887663 33222211 1345688999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgG 162 (456)
|+.+|.++.++.+++. ++|+|+|++|+|+|+.+.++.|+. ++|+|+||||+++|+.|+++++++++|+++||||
T Consensus 152 s~~~~~~~~~l~~~~~----~aGlP~g~~~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG 227 (457)
T cd07090 152 SPFTPLTALLLAEILT----EAGLPDGVFNVVQGGGETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKGIKHVTLELGG 227 (457)
T ss_pred CCcCcHHHHHHHHHHH----HcCCCcccEEEEeCChhhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCceEEecCC
Confidence 9999999998888765 689999999999998788888887 7999999999999999999999999999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHH
Q 012790 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 242 (456)
Q Consensus 163 k~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~ 242 (456)
|||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++++++
T Consensus 228 ~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~ 307 (457)
T cd07090 228 KSPLIIFDDADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMGALISEEHLE 307 (457)
T ss_pred CCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCeEeecCCCCCCC-CCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCC
Q 012790 243 KLQNLVNDALDKGAEILARGSFGHLS-EGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 321 (456)
Q Consensus 243 ~v~~~i~~a~~~Ga~v~~gG~~~~~~-~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~g 321 (456)
++.++|++++++|+++++||...... ....|+|++|||+++++++|++++||+||||++|++|+|.||||+++|+++||
T Consensus 308 ~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~~n~~~~g 387 (457)
T cd07090 308 KVLGYIESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYG 387 (457)
T ss_pred HHHHHHHHHHHCCCEEEECCCcCcccccCCCCeeECCEEEecCCCCChHHhCCCCCCeEEEEEECCHHHHHHHHhCCCcC
Confidence 99999999999999999999742111 11358899999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEc
Q 012790 322 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 322 L~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~ 391 (456)
|++||||+|.+.++++++++++|.|+||++... .+.+||||+|+||+|+++|++|+++||+.|+++..
T Consensus 388 Lsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~pfGG~k~SG~G~~~g~~~~~~f~~~k~~~~~ 455 (457)
T cd07090 388 LAAGVFTRDLQRAHRVIAQLQAGTCWINTYNIS--PVEVPFGGYKQSGFGRENGTAALEHYTQLKTVYVE 455 (457)
T ss_pred ceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCC--CCCCCcCCCccCcCCccchHHHHHHHhCeEEEEEe
Confidence 999999999999999999999999999986432 34689999999999999999999999999999753
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. |
| >cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-82 Score=671.60 Aligned_cols=375 Identities=32% Similarity=0.548 Sum_probs=343.6
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
...|+..+++.++|+++.++++.. +..+.. .+...+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 104 ~~~ev~~~~~~l~~~~~~~~~~~g-~~~~~~---~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kp 179 (484)
T cd07144 104 ALGDLDEIIAVIRYYAGWADKIQG-KTIPTS---PNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLAPALAAGNTVVIKP 179 (484)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC-ceecCC---CCceEEEEEecceEEEEECcCCCHHHHHHHHHHHHHHcCCEEEEEC
Confidence 356999999999999999888733 222211 1234688999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg 161 (456)
|+.+|+++..+.+++ .++|+|+|++|+|+|++ +.++.|+. ++|.|+||||+.+|+.|++.++++++|+++|||
T Consensus 180 s~~~p~~~~~l~~~~----~~aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~a~~~~~~~~lElG 255 (484)
T cd07144 180 AENTPLSLLYFANLV----KEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAAAQNLKAVTLECG 255 (484)
T ss_pred CccchHHHHHHHHHH----HHhCcCCCcEEEEecCCchHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCCeEEEEcC
Confidence 999999998888775 47899999999999964 77888887 899999999999999999999999999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhc-cccCCCCCCCCccccccCHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS-VSAGPPLAGKYDMGALCLLEH 240 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~-~~~g~~~~~~~~~gpli~~~~ 240 (456)
||||+||++|||++.|++.+++|+|.|+||.|++++|||||++++|+|+++|++++++ +++|+|.++++++||++++.+
T Consensus 256 Gk~p~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~ 335 (484)
T cd07144 256 GKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKVGSPFDDDTVVGPQVSKTQ 335 (484)
T ss_pred CCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhhCCcCCCCCCCCcCCCCcCHHH
Confidence 9999999999999999999999999999999999999999999999999999999985 899999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCC
Q 012790 241 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRY 320 (456)
Q Consensus 241 ~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~ 320 (456)
++++.++|++++++|+++++||..... ....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|
T Consensus 336 ~~~~~~~i~~a~~~ga~v~~gg~~~~~-~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~ 414 (484)
T cd07144 336 YDRVLSYIEKGKKEGAKLVYGGEKAPE-GLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYEEAIKKANDTTY 414 (484)
T ss_pred HHHHHHHHHHHHHCCCEEEeCCCcCcc-cCCCCceECCEEEeCCCCCCchhhCCCCCceEEEeccCCHHHHHHHHhCCCC
Confidence 999999999999999999999974211 1135899999999999999999999999999999999999999999999999
Q ss_pred CceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEE
Q 012790 321 GLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 390 (456)
Q Consensus 321 gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~ 390 (456)
||++||||+|.+.++++++++++|.|+||+.... .+.+||||+|+||+|+++|++|+++||+.|+|..
T Consensus 415 gLsa~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~ 482 (484)
T cd07144 415 GLAAAVFTKDIRRAHRVARELEAGMVWINSSNDS--DVGVPFGGFKMSGIGRELGEYGLETYTQTKAVHI 482 (484)
T ss_pred CceEEEECCCHHHHHHHHHhcCcCEEEECCCCCC--CCCCCcCCcccCcCCCCchHHHHHHhhceEEEEE
Confidence 9999999999999999999999999999987432 3568999999999999999999999999999875
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. |
| >cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-82 Score=674.96 Aligned_cols=373 Identities=24% Similarity=0.380 Sum_probs=340.8
Q ss_pred HHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecc-eEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecC
Q 012790 7 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPL-GVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 85 (456)
Q Consensus 7 ~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps 85 (456)
.|+..+++.++|+++.++++........ ..+...+++++|+ |||++|+|||||+.+..+++++|| +||+||+|||
T Consensus 130 ~~v~~~~~~~~~~a~~~~~~~~~~~~~~---~~~~~~~~~~~P~~GVv~~I~PwNfP~~~~~~~~~pal-aGN~VVlKPs 205 (522)
T cd07123 130 DAACELIDFLRFNVKYAEELYAQQPLSS---PAGVWNRLEYRPLEGFVYAVSPFNFTAIGGNLAGAPAL-MGNVVLWKPS 205 (522)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCccccCC---CCCceeEEEEecCCceEEEECCcccHHHHHHHHHHHHH-hCCEEEEECC
Confidence 4788889999999998888765332111 1134568999998 999999999999999999999999 5999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCC------cc
Q 012790 86 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLT------PV 156 (456)
Q Consensus 86 ~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~------pv 156 (456)
+.+|+++..+++++ .++|+|+|++|+|+|++ +.++.|+. ++|+|+||||+++|+.|+++|+++++ ++
T Consensus 206 ~~tp~~~~~l~~~l----~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FTGS~~~G~~i~~~aa~~l~~~~~~~~v 281 (522)
T cd07123 206 DTAVLSNYLVYKIL----EEAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSLWKQIGENLDRYRTYPRI 281 (522)
T ss_pred CCCCHHHHHHHHHH----HHcCcCCCcEEEEecCchHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHhhcccccccCCE
Confidence 99999999888775 47899999999999976 57888986 99999999999999999999999987 89
Q ss_pred cccCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCcccccc
Q 012790 157 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALC 236 (456)
Q Consensus 157 ~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli 236 (456)
++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||++
T Consensus 282 ~lElGGkn~~IV~~dAdl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~d~~t~~Gpli 361 (522)
T cd07123 282 VGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLWPEVKERLLEELKEIKMGDPDDFSNFMGAVI 361 (522)
T ss_pred EEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCccCCCCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhc-CCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCC--HHHHHH
Q 012790 237 LLEHSEKLQNLVNDALDK-GAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNT--DEEVVK 313 (456)
Q Consensus 237 ~~~~~~~v~~~i~~a~~~-Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~--~~eai~ 313 (456)
+++++++++++|++++++ |+++++||... ...|+|++|||+++++++|++++||+||||++|++|+| +||||+
T Consensus 362 ~~~~~~~v~~~v~~a~~~~Ga~vl~gg~~~----~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~~~~eai~ 437 (522)
T cd07123 362 DEKAFDRIKGYIDHAKSDPEAEIIAGGKCD----DSVGYFVEPTVIETTDPKHKLMTEEIFGPVLTVYVYPDSDFEETLE 437 (522)
T ss_pred CHHHHHHHHHHHHHHHHCCCCEEEeCCCcC----CCCCceEcCEEEeCCCCCChhhhcCCCCCeEEEEEeCCCCHHHHHH
Confidence 999999999999999999 99999999631 23589999999999999999999999999999999984 799999
Q ss_pred HHhcCC-CCceeEEecCCHHHHHHHHHhc--ccCCeeecCCcccccCcCCCccCCCCCCCC-CcchHHHHhccceeeEEE
Q 012790 314 LANDSR-YGLGCAVFSGSQHRAREIAAQI--QCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKSVV 389 (456)
Q Consensus 314 ~~n~~~-~gL~~~vft~d~~~~~~~~~~l--~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G-~~~g~~gl~~ft~~k~v~ 389 (456)
++|+++ |||++||||+|.+.+.++++++ ++|.|+||+...+...+.+||||+|+||+| +++|++++++||+.|++.
T Consensus 438 ~aN~~~~~gL~a~Vft~d~~~~~~~~~~l~~~~G~v~iN~~~~~~~~~~~PfGG~k~SG~gg~~~g~~~l~~~~~~k~~~ 517 (522)
T cd07123 438 LVDTTSPYALTGAIFAQDRKAIREATDALRNAAGNFYINDKPTGAVVGQQPFGGARASGTNDKAGSPLNLLRWVSPRTIK 517 (522)
T ss_pred HHhCCCCcCceEEEEeCCHHHHHHHHHhhhhcCcEEEECCCCCCCCCCCCCCCcchhcCCCcccCCHHHHHHhcceEEEE
Confidence 999985 9999999999999999999996 599999999766554556899999999996 999999999999999997
Q ss_pred Ec
Q 012790 390 ED 391 (456)
Q Consensus 390 ~~ 391 (456)
+.
T Consensus 518 ~~ 519 (522)
T cd07123 518 ET 519 (522)
T ss_pred Ee
Confidence 64
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. |
| >PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-82 Score=669.69 Aligned_cols=371 Identities=27% Similarity=0.484 Sum_probs=342.0
Q ss_pred HHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecCC
Q 012790 7 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 86 (456)
Q Consensus 7 ~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~ 86 (456)
.|+..+++.++|+++.++++..+.. +. .......+++++|+|||++|+|||||+.++++++++||++||+||+|||+
T Consensus 99 ~ev~~~~~~~~~~a~~~~~~~g~~~-~~--~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VIlKps~ 175 (475)
T PRK13473 99 DEIPAIVDVFRFFAGAARCLEGKAA-GE--YLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAPALAAGNTVVLKPSE 175 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCccc-cc--CCCCceeEEEEecceeEEEEccCChHHHHHHHHHHHHHhcCCEEEEECCC
Confidence 5899999999999987776543211 11 01233568899999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCC-hHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCCc
Q 012790 87 NASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK 163 (456)
Q Consensus 87 ~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~-~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgGk 163 (456)
.+|+++.++++++. ++ +|+|++|+|+|+ .+.+..|++ ++|.|+||||+++|+.|+++++++++|+++|||||
T Consensus 176 ~~p~~~~~l~~~~~----~a-lP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs~~~g~~i~~~aa~~~~~~~lElgG~ 250 (475)
T PRK13473 176 ITPLTALKLAELAA----DI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAADSVKRTHLELGGK 250 (475)
T ss_pred CChHHHHHHHHHHH----Hh-CCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCcEEEECCCC
Confidence 99999999888876 45 999999999995 478888887 89999999999999999999999999999999999
Q ss_pred ceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHHH
Q 012790 164 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEK 243 (456)
Q Consensus 164 ~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~ 243 (456)
||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.++++
T Consensus 251 ~p~iV~~dADld~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~ 330 (475)
T PRK13473 251 APVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLVAKLAAAVATLKVGDPDDEDTELGPLISAAHRDR 330 (475)
T ss_pred CeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcC-CeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCc
Q 012790 244 LQNLVNDALDKG-AEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 322 (456)
Q Consensus 244 v~~~i~~a~~~G-a~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL 322 (456)
+.++|+++.++| +++++||... ...|+|++|||+.++++++.+++||+||||++|++|+|+||||+++|+++|||
T Consensus 331 v~~~i~~a~~~G~a~v~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL 406 (475)
T PRK13473 331 VAGFVERAKALGHIRVVTGGEAP----DGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWANDSDYGL 406 (475)
T ss_pred HHHHHHHHHHcCCeEEEECCCcC----CCCceeEcCEEEecCCCCChhhhCCccCCeEEEeccCCHHHHHHHHhCCCCCc
Confidence 999999999999 9999999742 23588999999999999999999999999999999999999999999999999
Q ss_pred eeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEc
Q 012790 323 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 323 ~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~ 391 (456)
++||||+|.+.++++++++++|.|+||++..+ .+.+||||+|+||+|++||++|+++||+.|+++.+
T Consensus 407 ~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~~~~~t~~k~i~~~ 473 (475)
T PRK13473 407 ASSVWTRDVGRAHRVSARLQYGCTWVNTHFML--VSEMPHGGQKQSGYGKDMSLYGLEDYTVVRHVMVK 473 (475)
T ss_pred eEEEECCCHHHHHHHHHhCCcceEEECCCCCC--CCCCCCCCccccccCccchHHHHHHHhceEEEEEe
Confidence 99999999999999999999999999997654 34589999999999999999999999999998753
|
|
| >cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-82 Score=665.61 Aligned_cols=374 Identities=32% Similarity=0.534 Sum_probs=342.8
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++..+++.+.. .+. ..+...+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 77 a~~ev~~~~~~l~~~~~~~~~~~g~~-~~~---~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKp 152 (454)
T cd07109 77 ARADVEAAARYFEYYGGAADKLHGET-IPL---GPGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKP 152 (454)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcc-ccc---CCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEEC
Confidence 34699999999999999888775422 111 12346789999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCC-hHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~-~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg 161 (456)
|+.+|+++.++++++ .++|+|+|++++|+|+ .+.++.|++ ++|.|+||||+.+|+.|++.++++++|+++|||
T Consensus 153 s~~~p~~~~~l~~~~----~~aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~p~~lElg 228 (454)
T cd07109 153 AEDAPLTALRLAELA----EEAGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAENVVPVTLELG 228 (454)
T ss_pred CCCChHHHHHHHHHH----HHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEECC
Confidence 999999999888775 4789999999999995 477889987 799999999999999999999999999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
||||+||++|||++.|++.|++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+ ++++||+++++++
T Consensus 229 G~~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~G~p~~-~~~~gpli~~~~~ 307 (454)
T cd07109 229 GKSPQIVFADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPGLE-DPDLGPLISAKQL 307 (454)
T ss_pred CCCceEECCCCCHHHHHHHHHHHHHhccCCCCccCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCcc-cCcCCCccCHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999975 6899999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCC
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 321 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~g 321 (456)
+++.++|++++++|+++++||.....+ ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 308 ~~~~~~i~~a~~~ga~~l~gg~~~~~~-~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deAi~~~n~~~~g 386 (454)
T cd07109 308 DRVEGFVARARARGARIVAGGRIAEGA-PAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYG 386 (454)
T ss_pred HHHHHHHHHHHhCCCEEEeCCCcCccc-CCCCcEECcEEEecCCCCChhhhCCCCCceEEEEecCCHHHHHHHhhCCCCC
Confidence 999999999999999999998742211 2468999999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEE
Q 012790 322 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389 (456)
Q Consensus 322 L~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~ 389 (456)
|++||||+|.+.++++++++++|.|+||++.... .+.+||||+|+||+|++||++|+++||+.|+|.
T Consensus 387 L~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~-~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~i~ 453 (454)
T cd07109 387 LVAGVWTRDGDRALRVARRLRAGQVFVNNYGAGG-GIELPFGGVKKSGHGREKGLEALYNYTQTKTVA 453 (454)
T ss_pred ceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCC-CCCCCcCCcccCcCCccchHHHHHHHhceeEEe
Confidence 9999999999999999999999999999975343 346899999999999999999999999999985
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. |
| >cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-82 Score=673.08 Aligned_cols=376 Identities=28% Similarity=0.438 Sum_probs=344.9
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++.++++ ..+..+.. .+...+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 126 a~~ev~~~i~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKP 201 (512)
T cd07124 126 ADADVAEAIDFLEYYAREMLRL-RGFPVEMV---PGEDNRYVYRPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKP 201 (512)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-cCccccCC---CCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEEC
Confidence 3469999999999999999888 33322211 1345789999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhc------cCCc
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASK------TLTP 155 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~------~~~p 155 (456)
|+.+|+++..+++++. ++|+|+|++|+|+|++ +.+..|++ ++|+|+||||+.+|+.|++.+++ +++|
T Consensus 202 s~~tp~~~~~l~~~~~----~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~l~~ 277 (512)
T cd07124 202 AEDTPVIAAKLVEILE----EAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQPGQKWLKR 277 (512)
T ss_pred CccccHHHHHHHHHHH----HhCcCCCceEEeccCchHHHHHHhcCCCCCEEEEeCchHHHHHHHHHHhcccccccCCCc
Confidence 9999999998887764 7899999999999965 67888887 89999999999999999999987 7999
Q ss_pred ccccCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccc
Q 012790 156 VTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGAL 235 (456)
Q Consensus 156 v~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl 235 (456)
+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||+
T Consensus 278 ~~lElgGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~d~~~~~Gpl 357 (512)
T cd07124 278 VIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDEFLERLVERTKALKVGDPEDPEVYMGPV 357 (512)
T ss_pred EEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCccccceEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCcccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHH
Q 012790 236 CLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLA 315 (456)
Q Consensus 236 i~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~ 315 (456)
+++.+++++.++|+++++ |+++++||..... ...|+|++|||+++++++|++++||+||||++|++|+|+||||+++
T Consensus 358 i~~~~~~~v~~~i~~a~~-g~~vl~gG~~~~~--~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~ 434 (512)
T cd07124 358 IDKGARDRIRRYIEIGKS-EGRLLLGGEVLEL--AAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIA 434 (512)
T ss_pred cCHHHHHHHHHHHHHHHh-CCEEEecCccCCC--CCCCceEcCEEEecCCCCChHHhCCCcCCeEEEEecCCHHHHHHHH
Confidence 999999999999999987 8999999974211 1268999999999999999999999999999999999999999999
Q ss_pred hcCCCCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCC-CcchHHHHhccceeeEEEEc
Q 012790 316 NDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 316 n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G-~~~g~~gl~~ft~~k~v~~~ 391 (456)
|+++|||++||||+|.+.++++++++++|.|+||+...+...+.+||||+|+||+| +.+|++|+++||+.|+|.++
T Consensus 435 n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~~~~~t~~k~v~~~ 511 (512)
T cd07124 435 NDTEYGLTGGVFSRSPEHLERARREFEVGNLYANRKITGALVGRQPFGGFKMSGTGSKAGGPDYLLQFMQPKTVTEN 511 (512)
T ss_pred hCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCccCcHHHHHHhccEEEEEEe
Confidence 99999999999999999999999999999999999766555556899999999999 77789999999999999763
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. |
| >cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-82 Score=667.09 Aligned_cols=372 Identities=31% Similarity=0.535 Sum_probs=341.7
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
...|+..+++.++|+++.+++.... ..... .....+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 104 ~~~ev~~~~~~~~~~a~~a~~~~g~-~~~~~---~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKp 179 (481)
T cd07143 104 KRVDVQASADTFRYYGGWADKIHGQ-VIETD---IKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKP 179 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCc-cccCC---CCceEEEEEecceeEEEECCCcChHHHHHHHHHHHHHcCCEEEEeC
Confidence 3469999999999999887654322 11111 1335678999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhc-cCCcccccC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASK-TLTPVTLEL 160 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~-~~~pv~lEl 160 (456)
|+.+|.++..+.+++ .++|+|+|++|+|+|++ +.++.|+. ++|+|+||||+.+|+.|++++++ +++|+++||
T Consensus 180 s~~~p~~~~~l~~~l----~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~G~~i~~~aa~~~~~~~~lEl 255 (481)
T cd07143 180 SELTPLSALYMTKLI----PEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAKSNLKKVTLEL 255 (481)
T ss_pred CCCCcHHHHHHHHHH----HhcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHHhcCCEEEeec
Confidence 999999998887775 47999999999999965 67888887 89999999999999999999985 899999999
Q ss_pred CCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHH
Q 012790 161 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 240 (456)
Q Consensus 161 gGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~ 240 (456)
|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+
T Consensus 256 GG~~p~iV~~dADl~~Aa~~i~~~~~~naGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~ 335 (481)
T cd07143 256 GGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKVGDPFAEDTFQGPQVSQIQ 335 (481)
T ss_pred CCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCC
Q 012790 241 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRY 320 (456)
Q Consensus 241 ~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~ 320 (456)
++++.++|++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|
T Consensus 336 ~~~~~~~i~~a~~~ga~v~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~ 411 (481)
T cd07143 336 YERIMSYIESGKAEGATVETGGKRH----GNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEEAIKRANDSTY 411 (481)
T ss_pred HHHHHHHHHHHHhCCCEEEeCCCCC----CCCceEEeeEEEecCCCCChhhhcCCcCCeEEEEeeCCHHHHHHHHhCCCC
Confidence 9999999999999999999999741 236899999999999999999999999999999999999999999999999
Q ss_pred CceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEE
Q 012790 321 GLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 390 (456)
Q Consensus 321 gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~ 390 (456)
||++||||+|.+.+.++++++++|.|+||++.. ..+.+||||+|+||+|++||++|+++||+.|+|+.
T Consensus 412 gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~i~~ 479 (481)
T cd07143 412 GLAAAVFTNNINNAIRVANALKAGTVWVNCYNL--LHHQVPFGGYKQSGIGRELGEYALENYTQIKAVHI 479 (481)
T ss_pred CceEEEECCCHHHHHHHHHhcCcCeEEECCCCC--CCCCCCCCCccccccCcccHHHHHHHHhCeEEEEE
Confidence 999999999999999999999999999998744 34568999999999999999999999999999875
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. |
| >cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-82 Score=663.10 Aligned_cols=368 Identities=34% Similarity=0.529 Sum_probs=339.8
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++++++.... .+..... .+...+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 76 a~~ev~~~~~~l~~~~~~~~~---~~~~~~~---~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKp 149 (446)
T cd07106 76 AQFEVGGAVAWLRYTASLDLP---DEVIEDD---DTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKP 149 (446)
T ss_pred HHHHHHHHHHHHHHHHhhhhc---CccccCC---CCceEEEEEEcceEEEEEcCCChHHHHHHHHHHHHHHcCCEEEEEC
Confidence 346899999999999877521 1111111 2345689999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgG 162 (456)
|+.+|+++.++++++.++ +|+|++++++|+.+.+..|++ ++|.|+||||+++|+.|+++++++++|++|||||
T Consensus 150 s~~~p~~~~~l~~~~~~~-----lP~g~~~~v~g~~~~~~~l~~~~~vd~V~fTGs~~~g~~v~~~aa~~~~~~~lElGG 224 (446)
T cd07106 150 SPFTPLCTLKLGELAQEV-----LPPGVLNVVSGGDELGPALTSHPDIRKISFTGSTATGKKVMASAAKTLKRVTLELGG 224 (446)
T ss_pred CccchHHHHHHHHHHHHh-----CCcCeEEEeeCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeeEEecCC
Confidence 999999999999988642 999999999997788888887 7999999999999999999999999999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHH
Q 012790 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 242 (456)
Q Consensus 163 k~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~ 242 (456)
|||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++++++
T Consensus 225 ~~p~iV~~dADl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~ 304 (446)
T cd07106 225 NDAAIVLPDVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNKMQYD 304 (446)
T ss_pred CCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCcEEEEccccHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCc
Q 012790 243 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 322 (456)
Q Consensus 243 ~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL 322 (456)
+++++++++..+|+++++||... ...|+|++|||+++++++|++++||+||||++|++|+|+||||+++|+++|||
T Consensus 305 ~i~~~i~~a~~~ga~~~~gg~~~----~~~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL 380 (446)
T cd07106 305 KVKELVEDAKAKGAKVLAGGEPL----DGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGL 380 (446)
T ss_pred HHHHHHHHHHHCCCEEEeCCCcC----CCCCeeEcCEEEeCCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCc
Confidence 99999999999999999999742 23588999999999999999999999999999999999999999999999999
Q ss_pred eeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEE
Q 012790 323 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389 (456)
Q Consensus 323 ~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~ 389 (456)
++||||+|.+.++++++++++|.|+||++... .+.+||||+|+||+|++||++|+++||+.|+|.
T Consensus 381 ~~~i~t~d~~~~~~~~~~~~~G~v~iN~~~~~--~~~~pfGG~~~SG~G~~~g~~~~~~~t~~k~v~ 445 (446)
T cd07106 381 GASVWSSDLERAEAVARRLEAGTVWINTHGAL--DPDAPFGGHKQSGIGVEFGIEGLKEYTQTQVIN 445 (446)
T ss_pred eEEEECCCHHHHHHHHHhCCccEEEECCCCCC--CCCCCCCCccccccCccchHHHHHHhhceeEEe
Confidence 99999999999999999999999999997633 456899999999999999999999999999985
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. |
| >cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-82 Score=667.23 Aligned_cols=372 Identities=31% Similarity=0.484 Sum_probs=344.2
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecC
Q 012790 6 LGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 85 (456)
Q Consensus 6 ~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps 85 (456)
..|+..+++.++|+++.++++..++..+.. .+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus 97 ~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKps 173 (471)
T cd07139 97 RAQGPGPAALLRYYAALARDFPFEERRPGS---GGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPS 173 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCccccCC---CCceEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECC
Confidence 458999999999999998887654432221 23456899999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCCc
Q 012790 86 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK 163 (456)
Q Consensus 86 ~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgGk 163 (456)
+.+|+++.++.+++ .++|+|+|++++|+|+.+.+..|++ ++|.|+||||+.+|+.|++.++++++|+++|+|||
T Consensus 174 ~~~p~~~~~l~~~~----~~aglP~gv~~~v~g~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~~~~~~~~~~lElGG~ 249 (471)
T cd07139 174 PETPLDAYLLAEAA----EEAGLPPGVVNVVPADREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCGERLARVTLELGGK 249 (471)
T ss_pred CcCCHHHHHHHHHH----HHcCCCCCcEEEEeCCHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCEEEEEcCCC
Confidence 99999998877765 5799999999999997778888887 79999999999999999999999999999999999
Q ss_pred ceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHHH
Q 012790 164 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEK 243 (456)
Q Consensus 164 ~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~ 243 (456)
||+||++|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++++++++
T Consensus 250 np~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~ 329 (471)
T cd07139 250 SAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEALAAAVAALKVGDPLDPATQIGPLASARQRER 329 (471)
T ss_pred CeeEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCce
Q 012790 244 LQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLG 323 (456)
Q Consensus 244 v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~ 323 (456)
++++|++++++|+++++||..... ...++|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+
T Consensus 330 ~~~~i~~a~~~ga~v~~gg~~~~~--~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~ 407 (471)
T cd07139 330 VEGYIAKGRAEGARLVTGGGRPAG--LDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRIANDSDYGLS 407 (471)
T ss_pred HHHHHHHHHHCCCEEEeCCCcCCC--CCCCeEEccEEEecCCCcchHHhCccCCCeEEEeecCCHHHHHHHHhCCCCCce
Confidence 999999999999999999974211 135899999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEE
Q 012790 324 CAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389 (456)
Q Consensus 324 ~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~ 389 (456)
+||||+|.+.++++++++++|.|+||+.. . .+.+||||+|+||+|++||++|+++||+.|+|+
T Consensus 408 a~i~s~d~~~~~~~~~~l~~G~v~iN~~~--~-~~~~PfgG~k~SG~G~~~g~~~~~~ft~~k~i~ 470 (471)
T cd07139 408 GSVWTADVERGLAVARRIRTGTVGVNGFR--L-DFGAPFGGFKQSGIGREGGPEGLDAYLETKSIY 470 (471)
T ss_pred EEEEcCCHHHHHHHHHhCCcceEEECCCC--C-CCCCCCCCcccccCCccchHHHHHHHhceeEEe
Confidence 99999999999999999999999999865 2 356999999999999999999999999999985
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. |
| >cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-82 Score=667.79 Aligned_cols=372 Identities=32% Similarity=0.557 Sum_probs=342.4
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEe
Q 012790 4 ASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIK 83 (456)
Q Consensus 4 ~~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlK 83 (456)
+...|+..+++.++|+++.+++.... ..+.. .+...+++++|+|||++|+|||||+.++++++++||++||+||+|
T Consensus 100 ~~~~ev~~~~~~~~~~a~~~~~~~~~-~~~~~---~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL~aGN~VvlK 175 (476)
T cd07091 100 SAKGDVALSIKCLRYYAGWADKIQGK-TIPID---GNFLAYTRREPIGVCGQIIPWNFPLLMLAWKLAPALAAGNTVVLK 175 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCc-cccCC---CCceEEEEEeceeEEEEECCCcCHHHHHHHHHHHHHHcCCEEEEe
Confidence 33469999999999999877665332 11111 234568999999999999999999999999999999999999999
Q ss_pred cCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhc-cCCccccc
Q 012790 84 VSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASK-TLTPVTLE 159 (456)
Q Consensus 84 ps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~-~~~pv~lE 159 (456)
||+.+|.++.++++++. ++|+|+|++++|+|++ +.++.|+. ++|+|+||||+.+|+.|++.+++ +++|+++|
T Consensus 176 ps~~~p~~~~~l~~~~~----~aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~g~~v~~~aa~~~~~~~~lE 251 (476)
T cd07091 176 PAEQTPLSALYLAELIK----EAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAAAKSNLKKVTLE 251 (476)
T ss_pred CCCCChHHHHHHHHHHH----HcCcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCCceEEEe
Confidence 99999999998888764 6899999999999965 67888886 89999999999999999999997 89999999
Q ss_pred CCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHH
Q 012790 160 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLE 239 (456)
Q Consensus 160 lgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~ 239 (456)
||||||+||++|||++.|++.|++++|.|+||.|+|+++||||++++|+|+++|+++++++++|+|.++++++||++++.
T Consensus 252 lgG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~ 331 (476)
T cd07091 252 LGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVEKFKARAEKRVVGDPFDPDTFQGPQVSKA 331 (476)
T ss_pred cCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCCcCCCCcCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCC
Q 012790 240 HSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSR 319 (456)
Q Consensus 240 ~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~ 319 (456)
+++++.+++++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++
T Consensus 332 ~~~~v~~~i~~a~~~ga~vl~gg~~~----~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~ 407 (476)
T cd07091 332 QFDKILSYIESGKKEGATLLTGGERH----GSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDEVIERANDTE 407 (476)
T ss_pred HHHHHHHHHHHHHHCCCEEEeCCCCC----CCCCceECcEEecCCCCCChhhhCCCCCCeEEEeecCCHHHHHHHHhCCC
Confidence 99999999999999999999999742 23689999999999999999999999999999999999999999999999
Q ss_pred CCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEE
Q 012790 320 YGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389 (456)
Q Consensus 320 ~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~ 389 (456)
|||++||||+|.+.++++++++++|.|+||+... ..+.+||||+|+||+|++||++|+++||+.|++.
T Consensus 408 ~gLsa~v~t~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~~ 475 (476)
T cd07091 408 YGLAAGVFTKDINKALRVSRALKAGTVWVNTYNV--FDAAVPFGGFKQSGFGRELGEEGLEEYTQVKAVT 475 (476)
T ss_pred CCceEEEECCCHHHHHHHHHhcCcceEEECCCCC--CCCCCCcCCcccCcCCccchHHHHHHhhceeEEe
Confidence 9999999999999999999999999999998644 3456899999999999999999999999999985
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co |
| >TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-82 Score=670.92 Aligned_cols=375 Identities=26% Similarity=0.422 Sum_probs=344.6
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|++++++++.+... +.. ..+...+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 126 a~~ev~~~~~~~~~~a~~~~~~~~~~~-~~~--~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~i~~ALaaGN~VVlKP 202 (511)
T TIGR01237 126 ADAEVAEAIDFCEYYAREMERLAGQGV-NLD--IEGETNRYFYQPRGVAVVISPWNFPMAIAVGMTVAPIVTGNCVVLKP 202 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCccc-cCC--CCCceeEEEEecceeEEEECCCCcHHHHHHHHHHHHHHcCCEEEEEC
Confidence 456999999999999999998865322 111 12345789999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhh------ccCCc
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNAS------KTLTP 155 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa------~~~~p 155 (456)
|+.+|+++..+++++ .++|+|+|++|+|+|++ +.++.|++ ++|.|+||||+.+|+.|++.|+ ++++|
T Consensus 203 s~~tp~~~~~l~~~~----~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~~~~~~ 278 (511)
T TIGR01237 203 AETSTVIAAKIVEIL----IEAGLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTGSREVGCRIYEDAAKVQPGQKHLKR 278 (511)
T ss_pred CCCCcHHHHHHHHHH----HHhCCCCCcEEEccCCCchhHHHHhcCCCCCeEEEECchHHHHHHHHHHhcccccccccce
Confidence 999999998888775 47899999999999964 78899987 8999999999999999999988 58999
Q ss_pred ccccCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccc
Q 012790 156 VTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGAL 235 (456)
Q Consensus 156 v~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl 235 (456)
+++|||||||+||++|||++.|++.|++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|.++++++||+
T Consensus 279 ~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~~~~~~~~~gpl 358 (511)
T TIGR01237 279 VIAEMGGKDAIIVDESADIEQAVAGAVYSAFGFTGQKCSACSRVVVLSPVYDAVVERFVEATRSLNVGPTDDPSTQVGPV 358 (511)
T ss_pred eEeccCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccceEEEEehhHHHHHHHHHHHHHHhCCCCCCCCCCCcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHH
Q 012790 236 CLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLA 315 (456)
Q Consensus 236 i~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~ 315 (456)
+++++++++.+++++++++| ++++||.. ....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++
T Consensus 359 i~~~~~~~v~~~i~~a~~~g-~~l~gg~~----~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPVl~v~~~~~~deai~~~ 433 (511)
T TIGR01237 359 IDQKSQAKIQEYIEQGKAEG-ELAIGGCD----APSEGYFIGPTIFKDVDRHARLAQEEIFGPVVAIIRAADFDEALEIA 433 (511)
T ss_pred CCHHHHHHHHHHHHHHHHCC-cEEECCcc----CCCCCeEEcCEEEeCCCCCChHhhCCCcCCeEEEEeeCCHHHHHHHH
Confidence 99999999999999999888 78998863 12368999999999999999999999999999999999999999999
Q ss_pred hcCCCCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCC-cchHHHHhccceeeEEEEc
Q 012790 316 NDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGR-FAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 316 n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~-~~g~~gl~~ft~~k~v~~~ 391 (456)
|+++|||++||||+|.++++++++++++|.|+||++..+...+.+||||+|.||+|+ .+|++++++||+.|+|..+
T Consensus 434 n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~~~~~k~v~~~ 510 (511)
T TIGR01237 434 NGTEYGLTGGVYSNTRDHIERAAAEFEVGNLYFNRTITGAIVGRQPFGGFKMSGTDSKAGGPDYLLQFMQPKTVTEN 510 (511)
T ss_pred hCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCcCCCHHHHHHhcceEEEEEe
Confidence 999999999999999999999999999999999998665544568999999999995 7899999999999998753
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs. |
| >cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-82 Score=662.13 Aligned_cols=373 Identities=31% Similarity=0.508 Sum_probs=342.5
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|++...++... ...+. ...+...+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 78 a~~ev~~~i~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~ALaaGN~Vi~Kp 154 (454)
T cd07118 78 ARGEIEGAADLWRYAASLARTLHG-DSYNN--LGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKP 154 (454)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC-ccccc--CCCCceeeEEeecceEEEEECCCCcHHHHHHHHHHHHHhcCCEEEEEC
Confidence 457999999999999987654432 22111 112345688999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg 161 (456)
|+.+|.++.++++++ .++|+|+|++++|+|++ +.+..|++ ++|.|+||||+++|+.|++.++++++|+++|||
T Consensus 155 s~~~p~~~~~l~~~~----~~aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelg 230 (454)
T cd07118 155 SEFTSGTTLMLAELL----IEAGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAARNLKKVSLELG 230 (454)
T ss_pred CCCCcHHHHHHHHHH----HhcCCCccceEEEecCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEeccC
Confidence 999999999888775 47899999999999976 67888987 899999999999999999999999999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
||||+||++|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.++
T Consensus 231 G~n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~p~~~~~~~gpli~~~~~ 310 (454)
T cd07118 231 GKNPQIVFADADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKVGAIINEAQL 310 (454)
T ss_pred CCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCcCCCCcCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCC
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 321 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~g 321 (456)
+++.++|++++++|+++++||.... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 311 ~~~~~~i~~a~~~ga~v~~gg~~~~---~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~g 387 (454)
T cd07118 311 AKITDYVDAGRAEGATLLLGGERLA---SAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEAIALANDTVYG 387 (454)
T ss_pred HHHHHHHHHHHhCCCEEEeCCCCCC---CCCCeEEeCEEEeCCCCCCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCcc
Confidence 9999999999999999999997421 1368999999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEE
Q 012790 322 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389 (456)
Q Consensus 322 L~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~ 389 (456)
|++||||+|.+.++++++++++|.|+||++... .+.+||||+|+||+|+++|++|+++||+.|++.
T Consensus 388 L~~~vft~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~PfgG~~~SG~G~~~g~~~l~~~t~~k~~~ 453 (454)
T cd07118 388 LSAGVWSKDIDTALTVARRIRAGTVWVNTFLDG--SPELPFGGFKQSGIGRELGRYGVEEYTELKTVH 453 (454)
T ss_pred ceEEEECCCHHHHHHHHHhcCcCEEEECCCCCC--CCCCCcCCcccccCCcCchHHHHHHHhceeEEe
Confidence 999999999999999999999999999997543 456899999999999999999999999999974
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. |
| >TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-82 Score=664.05 Aligned_cols=372 Identities=27% Similarity=0.466 Sum_probs=338.7
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCc--ccccccceEEEecc-eEEEEEcCCccchHhhHHHHHHHHhcCCeEE
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGR--SMIHKKAKVEFHPL-GVVGAIVSWNYPFHNIFNPMLAAVFSGNGIV 81 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~-GVv~vi~p~N~P~~~~~~~~~~ALaaGN~Vv 81 (456)
+..|+..+++.++|+++.+.++.... ..... .......+++++|+ |||++|+|||||+.++++++++||++||+||
T Consensus 93 a~~ev~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~P~~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~Vv 171 (472)
T TIGR03250 93 SLYEVGRVADVLTFAAAEALRDDGQI-FSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQVAHKIAPAIATNNRMV 171 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcc-cccccCCCCCCceEEEEEcCCCCEEEEEcCCcHHHHHHHHHHHHHHHcCCEEE
Confidence 45699999999999999887654321 11111 01123568999998 9999999999999999999999999999999
Q ss_pred EecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccc
Q 012790 82 IKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTL 158 (456)
Q Consensus 82 lKps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~l 158 (456)
+|||+.+|+++.++++++. ++|+|+|++|+|+|++ +.+..|++ ++|+|+||||+.+|+.|++.++ ++|+++
T Consensus 172 lKps~~~p~~~~~l~~~~~----~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~--~~~~~l 245 (472)
T TIGR03250 172 VKPSEKTPLSALYLADILY----EAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIAARAG--YRRQVL 245 (472)
T ss_pred EECCCcchHHHHHHHHHHH----HcCCCcccEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhc--CCceEE
Confidence 9999999999988887754 7899999999999964 67888987 9999999999999999999886 789999
Q ss_pred cCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCH
Q 012790 159 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLL 238 (456)
Q Consensus 159 ElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~ 238 (456)
|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++
T Consensus 246 ElGGk~p~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~ 325 (472)
T TIGR03250 246 ELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYGDPMDPSVDMGTVIDE 325 (472)
T ss_pred ecCCCCeEEECCCCCHHHHHHHHHHHHHHhhCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcC
Q 012790 239 EHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDS 318 (456)
Q Consensus 239 ~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~ 318 (456)
.+++++++++++++++|+++++||. ..|+|++|||+++++++|++++||+||||++|++|+|.||||+++|++
T Consensus 326 ~~~~~v~~~i~~a~~~Ga~vl~gg~-------~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~aN~~ 398 (472)
T TIGR03250 326 AAAILFEARVNEAIAQGARLLLGNV-------RDGALYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRISNST 398 (472)
T ss_pred HHHHHHHHHHHHHHHCCCEEEECCC-------cCCEEEcCEEEeCCCCCChHHhCCCcCCeEEEEEeCCHHHHHHHHhCC
Confidence 9999999999999999999999986 258999999999999999999999999999999999999999999999
Q ss_pred CCCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCC-CcchHHHHhccceeeEEEEc
Q 012790 319 RYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 319 ~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G-~~~g~~gl~~ft~~k~v~~~ 391 (456)
+|||++||||+|.+++.++++++++|+|+||+..... .+.+||||+|+||+| +.+|++||++||+.|++..+
T Consensus 399 ~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~-~~~~PfGG~k~SG~G~~~g~~~~l~~ft~~k~i~~~ 471 (472)
T TIGR03250 399 AYGLSSGVCTNRLDYITRFIAELQVGTVNVWEVPGYR-LELTPFGGIKDSGLGYKEGVQEAMKSFTNLKTYSLP 471 (472)
T ss_pred CccceEEEEcCCHHHHHHHHHHCCcceEEEcCCCCCC-CCCCCCCccccccCCCCCChHHHHHHhhceEEEEEe
Confidence 9999999999999999999999999999999875433 344899999999999 55678999999999998753
|
It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. |
| >cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-82 Score=660.66 Aligned_cols=369 Identities=32% Similarity=0.497 Sum_probs=339.0
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++..++.... ..+. ..+...+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 70 a~~ev~~~i~~l~~~~~~~~~~~~~-~~~~---~~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKp 145 (443)
T cd07152 70 AGFEVGAAIGELHEAAGLPTQPQGE-ILPS---APGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKP 145 (443)
T ss_pred HHHHHHHHHHHHHHHHHhHHHhCCc-cccc---cCCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEEEC
Confidence 4569999999999999876543221 1111 12345688999999999999999999999999999999999999999
Q ss_pred CCCChhHH-HHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCC
Q 012790 85 SENASWSG-CFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 85 s~~~p~~~-~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg 161 (456)
|+.+|.++ .++.++ |.++|+|+|++|+|+|+.+.+..|+. ++|.|+||||+.+|+.|+++++++++|+++|||
T Consensus 146 s~~~p~~~~~~l~~~----~~~ag~P~gvv~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~lElG 221 (443)
T cd07152 146 DPRTPVSGGVVIARL----FEEAGLPAGVLHVLPGGADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKKVSLELG 221 (443)
T ss_pred CcccchhHHHHHHHH----HHHhCcCcCcEEEecCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECC
Confidence 99999996 455555 45799999999999997788888887 899999999999999999999999999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|.++++++||++++.++
T Consensus 222 Gk~~~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~ 301 (443)
T cd07152 222 GKNALIVLDDADLDLAASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQL 301 (443)
T ss_pred CCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCcCCeeEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCC
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 321 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~g 321 (456)
+++.++|++++++|+++++||.. +|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 302 ~~v~~~i~~a~~~Ga~vl~gg~~-------~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~g 374 (443)
T cd07152 302 DRVHAIVDDSVAAGARLEAGGTY-------DGLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYG 374 (443)
T ss_pred HHHHHHHHHHHhCCCEEEeccCc-------CCEEEcCEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCcc
Confidence 99999999999999999999872 47999999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCC-CcchHHHHhccceeeEEE
Q 012790 322 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKSVV 389 (456)
Q Consensus 322 L~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G-~~~g~~gl~~ft~~k~v~ 389 (456)
|++||||+|.++++++++++++|.|+||++..+. .+.+||||+|.||+| +.+|++||++||+.|++.
T Consensus 375 L~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~-~~~~pfGG~~~SG~G~~~~g~~~l~~~~~~k~~~ 442 (443)
T cd07152 375 LSAGIISRDVGRAMALADRLRTGMLHINDQTVND-EPHNPFGGMGASGNGSRFGGPANWEEFTQWQWVT 442 (443)
T ss_pred ceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCC-CCCCCCCCcccccCCCccCcHHHHHHhhceeEEe
Confidence 9999999999999999999999999999976653 356999999999999 788999999999999875
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. |
| >cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-82 Score=660.53 Aligned_cols=375 Identities=34% Similarity=0.510 Sum_probs=346.3
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++.+++++++...+.. .+...+++++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 75 ~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~ALaaGN~VVlKp 151 (452)
T cd07102 75 AGGEIRGMLERARYMISIAEEALADIRVPEK---DGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKH 151 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcccCCC---CCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEEC
Confidence 3568999999999999999988765433221 2345678999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgG 162 (456)
|+.+|.++..+.+++ .++|+|+|++|+|+|+.+.+..|++ .+|.|+||||+++|++|+++++++++|+++||||
T Consensus 152 s~~~~~~~~~l~~~l----~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~v~lelgG 227 (452)
T cd07102 152 SPQTPLCGERFAAAF----AEAGLPEGVFQVLHLSHETSAALIADPRIDHVSFTGSVAGGRAIQRAAAGRFIKVGLELGG 227 (452)
T ss_pred CCCCcHHHHHHHHHH----HhcCCCcCcEEEEeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCC
Confidence 999999998777765 4799999999999997788889987 8999999999999999999999999999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHH
Q 012790 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 242 (456)
Q Consensus 163 k~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~ 242 (456)
|||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++
T Consensus 228 ~~~~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~l~vg~p~~~~~~~gpli~~~~~~ 307 (452)
T cd07102 228 KDPAYVRPDADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAAD 307 (452)
T ss_pred CCceEEcCCCCHHHHHHHHHHHHHHhCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCc
Q 012790 243 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 322 (456)
Q Consensus 243 ~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL 322 (456)
++++++++++++|+++++||.....+ +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||
T Consensus 308 ~i~~~i~~a~~~ga~vl~gg~~~~~~-~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL 386 (452)
T cd07102 308 FVRAQIADAIAKGARALIDGALFPED-KAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAIALMNDSEYGL 386 (452)
T ss_pred HHHHHHHHHHhCCCEEEeCCCCCCCC-CCCCceEcCEEEecCCCCChhhhcCCcCCeEEEEEeCCHHHHHHHHhCCCCCc
Confidence 99999999999999999999742211 24689999999999999999999999999999999999999999999999999
Q ss_pred eeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEE
Q 012790 323 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389 (456)
Q Consensus 323 ~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~ 389 (456)
++||||+|.+++.++++++++|.|+||++... .+.+||||+|+||+|++||++|+++||+.|+++
T Consensus 387 ~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~~~ 451 (452)
T cd07102 387 TASVWTKDIARAEALGEQLETGTVFMNRCDYL--DPALAWTGVKDSGRGVTLSRLGYDQLTRPKSYH 451 (452)
T ss_pred eEEEEcCCHHHHHHHHHHcCcceEEECCCCCC--CCCCCCCCccccccCccchHHHHHHHhceeEEe
Confidence 99999999999999999999999999987532 345899999999999999999999999999984
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. |
| >cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-82 Score=658.19 Aligned_cols=371 Identities=29% Similarity=0.485 Sum_probs=339.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecC
Q 012790 6 LGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 85 (456)
Q Consensus 6 ~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps 85 (456)
..|+..+++.++|+++.+++|.+...............++.++|+|||++|+|||||+.++++++++||++||+||+|||
T Consensus 57 ~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps 136 (443)
T cd07132 57 LSEILLVKNEIKYAISNLPEWMKPEPVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPS 136 (443)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCccCCCccccCCCceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECC
Confidence 46999999999999999999876543222111123457899999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh-ccCEEEecCCHHHHHHHHHHhhccCCcccccCCCcc
Q 012790 86 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD 164 (456)
Q Consensus 86 ~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~-~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgGk~ 164 (456)
+.+|.++..+.+++.+ ++|+|++++++|+++.+..|+. ++|.|+||||+++|+.|++.++++++|+++||||||
T Consensus 137 ~~~~~~~~~l~~~~~~-----~lp~gv~~vv~g~~~~~~~l~~~~vd~V~fTGs~~~g~~i~~~a~~~~~~~~lElgG~~ 211 (443)
T cd07132 137 EVSPATAKLLAELIPK-----YLDKECYPVVLGGVEETTELLKQRFDYIFYTGSTSVGKIVMQAAAKHLTPVTLELGGKS 211 (443)
T ss_pred ccCHHHHHHHHHHHHH-----hCCcCeEEEEeCCHHHHHHHHhCCCCEEEEECChHHHHHHHHHHHhhCCceEEEcCCCC
Confidence 9999999999988764 3999999999998777777888 999999999999999999999999999999999999
Q ss_pred eEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHHHH
Q 012790 165 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKL 244 (456)
Q Consensus 165 p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v 244 (456)
|+||++|||++.|++.|++++|.|+||.|++++|||||++++|+|+++|.+++++++.|++ ++++++||++++++++++
T Consensus 212 p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~v 290 (443)
T cd07132 212 PCYVDKSCDIDVAARRIAWGKFINAGQTCIAPDYVLCTPEVQEKFVEALKKTLKEFYGEDP-KESPDYGRIINDRHFQRL 290 (443)
T ss_pred ceEEcCCCCHHHHHHHHHHHHHhcCCCceeCCcEEEEcHHHHHHHHHHHHHHHHHhcCCCC-CcccccCCcCCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999988887 688899999999999999
Q ss_pred HHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCcee
Q 012790 245 QNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGC 324 (456)
Q Consensus 245 ~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~ 324 (456)
++++++ +++++||.. +..++|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++
T Consensus 291 ~~~i~~-----a~~~~gg~~-----~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~an~~~~gL~a 360 (443)
T cd07132 291 KKLLSG-----GKVAIGGQT-----DEKERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLAL 360 (443)
T ss_pred HHHHhC-----CEEEeCCcc-----CCCCCEEeeEEEeCCCCCChHHhccccCceeEEEEeCCHHHHHHHHhcCCCCcEE
Confidence 999873 489999873 2358899999999999999999999999999999999999999999999999999
Q ss_pred EEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEcc
Q 012790 325 AVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 325 ~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~ 392 (456)
||||+|.+.++++++++++|.|+||++..+...+.+||||+|+||+|+++|.+||++||+.|+++.+.
T Consensus 361 ~i~t~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~~ 428 (443)
T cd07132 361 YVFSNNKKVINKILSNTSSGGVCVNDTIMHYTLDSLPFGGVGNSGMGAYHGKYSFDTFSHKRSCLVKS 428 (443)
T ss_pred EEECCCHHHHHHHHHhCCcceEEECCcccccCCCCCCCCCCCcccCCCcccHHHHHHhccccEEEEcc
Confidence 99999999999999999999999998765554456899999999999999999999999999998764
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. |
| >cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-82 Score=664.17 Aligned_cols=372 Identities=30% Similarity=0.459 Sum_probs=336.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecC
Q 012790 6 LGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 85 (456)
Q Consensus 6 ~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps 85 (456)
..|+..+++.++|+++.+++.... .... ......+++++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus 97 ~~ev~~~~~~~~~~a~~~~~~~~~-~~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VV~KPs 172 (479)
T cd07116 97 AADIPLAIDHFRYFAGCIRAQEGS-ISEI---DENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPA 172 (479)
T ss_pred HHHHHHHHHHHHHHHHhHHHcCCe-eecC---CCCceEEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECC
Confidence 359999999999999987664221 1111 112346789999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCC
Q 012790 86 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162 (456)
Q Consensus 86 ~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgG 162 (456)
+.+|.++.++++++.+ + +|+|++|+|+|.+ +.+..|++ ++|+|+||||+++|+.|++.++++++|+++||||
T Consensus 173 ~~tp~~~~~l~~l~~~----a-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~p~~lElGG 247 (479)
T cd07116 173 EQTPASILVLMELIGD----L-LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYASENIIPVTLELGG 247 (479)
T ss_pred CCChHHHHHHHHHHHH----H-CCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHcCCCeEEEECCC
Confidence 9999999999998764 4 9999999999954 77888986 9999999999999999999999999999999999
Q ss_pred cceEEEcCC------CCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCcccccc
Q 012790 163 KDAFIVCDD------VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALC 236 (456)
Q Consensus 163 k~p~iV~~d------aDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli 236 (456)
|||+||++| ||++.|++.++++. +|+||.|++++|||||++++|+|+++|.++++++++|+|.++++++||++
T Consensus 248 k~p~iV~~da~~~~~adl~~A~~~i~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~Gpli 326 (479)
T cd07116 248 KSPNIFFADVMDADDAFFDKALEGFVMFA-LNQGEVCTCPSRALIQESIYDRFMERALERVKAIKQGNPLDTETMIGAQA 326 (479)
T ss_pred CCeEEEecCcccccccCHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCC
Confidence 999999998 79999999999965 59999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHh
Q 012790 237 LLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAN 316 (456)
Q Consensus 237 ~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n 316 (456)
+++++++++++|++++++|+++++||.....+....|+|++|||+.+++ +|++++||+||||++|++|+|+||||+++|
T Consensus 327 ~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~-~~~~~~eE~FGPVl~v~~~~~~~eai~~aN 405 (479)
T cd07116 327 SLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKGGN-KMRIFQEEIFGPVLAVTTFKDEEEALEIAN 405 (479)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeeecCeEEccCC-CChhhhcCCcCceEEEEEeCCHHHHHHHHh
Confidence 9999999999999999999999999974321112368999999999875 999999999999999999999999999999
Q ss_pred cCCCCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEE
Q 012790 317 DSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 390 (456)
Q Consensus 317 ~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~ 390 (456)
+++|||++||||+|.++++++++++++|.|+||++... .+.+||||+|+||+|+++|++||++||+.|++..
T Consensus 406 ~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~~~~ 477 (479)
T cd07116 406 DTLYGLGAGVWTRDGNTAYRMGRGIQAGRVWTNCYHLY--PAHAAFGGYKQSGIGRENHKMMLDHYQQTKNLLV 477 (479)
T ss_pred CCcccceEEEEcCCHHHHHHHHHhcCcCeEEECCCCCC--CCCCCcCCCccCcCCccChHHHHHHhhceEEEEE
Confidence 99999999999999999999999999999999986443 3458999999999999999999999999999865
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. |
| >cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-82 Score=660.73 Aligned_cols=371 Identities=33% Similarity=0.534 Sum_probs=341.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecC
Q 012790 6 LGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 85 (456)
Q Consensus 6 ~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps 85 (456)
..|+..+++.++|+++.+++.... ..+. ..+...+++++|+|||++|+|||||+.++++++++||++||+||+|||
T Consensus 78 ~~ev~~~i~~l~~~~~~~~~~~g~-~~~~---~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps 153 (453)
T cd07115 78 RLDVPRAADTFRYYAGWADKIEGE-VIPV---RGPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPA 153 (453)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCc-eecC---CCCceEEEEecceeEEEEEcCCCCHHHHHHHHHHHHHhcCCEEEEECC
Confidence 358999999999998877654321 1111 123456899999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCC
Q 012790 86 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162 (456)
Q Consensus 86 ~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgG 162 (456)
+.+|+++..+.+++. ++|+|++++++|+|++ +.++.|+. ++|.|+||||+.+|+.|+++++++++|+++||||
T Consensus 154 ~~~p~~~~~l~~~~~----~aGlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG 229 (453)
T cd07115 154 ELTPLSALRIAELMA----EAGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAGNLKRVSLELGG 229 (453)
T ss_pred CCCcHHHHHHHHHHH----hcCcCchheEEEecCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCeEEEecCC
Confidence 999999998888764 6899999999999965 67888886 7999999999999999999999999999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHH
Q 012790 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 242 (456)
Q Consensus 163 k~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~ 242 (456)
|||+||++|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++++++
T Consensus 230 ~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~ 309 (453)
T cd07115 230 KSANIVFADADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKTQMGPLVSQAQFD 309 (453)
T ss_pred CCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCc
Q 012790 243 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 322 (456)
Q Consensus 243 ~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL 322 (456)
++.++|+++.++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||
T Consensus 310 ~~~~~i~~a~~~Ga~v~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL 385 (453)
T cd07115 310 RVLDYVDVGREEGARLLTGGKRP----GARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRIANGTEYGL 385 (453)
T ss_pred HHHHHHHHHHHCCCEEEeCCCCC----CCCCceECCEEEecCCCCChHhhCCCcCceEEEEeeCCHHHHHHHHhCCCCCC
Confidence 99999999999999999999731 23588999999999999999999999999999999999999999999999999
Q ss_pred eeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEE
Q 012790 323 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 390 (456)
Q Consensus 323 ~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~ 390 (456)
++||||+|.+.++++++++++|.|+||++... .+.+||||+|+||+|++||++|+++||+.|++..
T Consensus 386 ~~~ifs~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~~~~ 451 (453)
T cd07115 386 AAGVWTRDLGRAHRVAAALKAGTVWINTYNRF--DPGSPFGGYKQSGFGREMGREALDEYTEVKSVWV 451 (453)
T ss_pred eEEEECCCHHHHHHHHHhcCccEEEECCCCCC--CCCCCCCCcccccCCcCchHHHHHHhhceEEEEE
Confidence 99999999999999999999999999986433 3568999999999999999999999999999865
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. |
| >cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-81 Score=663.23 Aligned_cols=378 Identities=31% Similarity=0.488 Sum_probs=345.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecC
Q 012790 6 LGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 85 (456)
Q Consensus 6 ~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps 85 (456)
..|+..+++.++|+++.+++. +.+..+.. ......+++++|+|||++|+|||||+.++++++++||++||+||+|||
T Consensus 95 ~~ev~~~i~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps 171 (478)
T cd07131 95 RGDVQEAIDMAQYAAGEGRRL-FGETVPSE--LPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPA 171 (478)
T ss_pred HHHHHHHHHHHHHHHHHHHHh-CCcccccC--CCCceEEEEeeceeEEEEECCcCcHHHHHHHHHHHHHHcCCEEEEECC
Confidence 469999999999999988764 33322221 122356899999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCC
Q 012790 86 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162 (456)
Q Consensus 86 ~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgG 162 (456)
+.+|+++..+++++ .++|+|+|++|+|+|++ +.+..|+. ++|+|+||||+.+|+.|++.++++++|+++||||
T Consensus 172 ~~~p~~~~~l~~~l----~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~~lelgG 247 (478)
T cd07131 172 EDTPACALKLVELF----AEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCARPNKRVALEMGG 247 (478)
T ss_pred CcCcHHHHHHHHHH----HhcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCcEEEECCC
Confidence 99999998888775 47999999999999966 57888887 8999999999999999999999999999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHH
Q 012790 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 242 (456)
Q Consensus 163 k~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~ 242 (456)
|||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++
T Consensus 248 ~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~ 327 (478)
T cd07131 248 KNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKRFVERAKRLRVGDGLDEETDMGPLINEAQLE 327 (478)
T ss_pred CCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhhHHHHHHHHHHHHHhcCCCCCCCCCCcCCcCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCc
Q 012790 243 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 322 (456)
Q Consensus 243 ~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL 322 (456)
++.++|++|+++|+++++||.....+....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||
T Consensus 328 ~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL 407 (478)
T cd07131 328 KVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEAIEIANDTEYGL 407 (478)
T ss_pred HHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEeCCCCCChHhhCCCcCCeEEEEEeCCHHHHHHHHhCCCCcc
Confidence 99999999999999999999743211114689999999999999999999999999999999999999999999999999
Q ss_pred eeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCC-CcchHHHHhccceeeEEEEc
Q 012790 323 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 323 ~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G-~~~g~~gl~~ft~~k~v~~~ 391 (456)
++||||+|.++++++++++++|.|+||+...+. .+.+||||+|+||+| +++|++|+++||+.|+|+.+
T Consensus 408 ~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~-~~~~pfgG~k~SG~G~~~~g~~~~~~f~~~k~i~~~ 476 (478)
T cd07131 408 SSAIYTEDVNKAFRARRDLEAGITYVNAPTIGA-EVHLPFGGVKKSGNGHREAGTTALDAFTEWKAVYVD 476 (478)
T ss_pred eEEEEcCCHHHHHHHHHhcCccEEEECCCCCCC-CCCCCCCCcccccCCCcCCcHHHHHHhhheEEEEEe
Confidence 999999999999999999999999999976543 346999999999999 77799999999999999764
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. |
| >TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-82 Score=669.26 Aligned_cols=373 Identities=24% Similarity=0.380 Sum_probs=341.0
Q ss_pred HHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecc-eEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecCC
Q 012790 8 EIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPL-GVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 86 (456)
Q Consensus 8 Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~ 86 (456)
|+..+++.++|+++.++++........ ..+...++.++|+ |||++|+|||||+.+..+++++|| +||+||+|||+
T Consensus 131 ~v~~~i~~~~~~a~~a~~~~~~~~~~~---~~~~~~~~~~~P~~GVv~~I~PwN~P~~~~~~~~a~AL-aGN~VVlKPs~ 206 (533)
T TIGR01236 131 AVAELIDFFRFNVKYARELYEQQPSES---APGEWNRTDYRPLEGFVYAISPFNFTAIAGNLPGAPAL-MGNTVIWKPSI 206 (533)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccCC---CCCceeEEEEecCCCEEEEEeCCchHHHHHHHHHHHHH-hCCeEEEECCC
Confidence 388889999999998887754322111 1234578999999 999999999999999999999999 79999999999
Q ss_pred CChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCc------cc
Q 012790 87 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTP------VT 157 (456)
Q Consensus 87 ~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~p------v~ 157 (456)
.+|+++.++++++ .++|+|+|++|+|+|++ +.++.|+. ++|+|+||||+++|+.|++.++++++| ++
T Consensus 207 ~tp~~~~~l~~~~----~~aGlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~FTGS~~~G~~i~~~aa~~l~~~~~~~~v~ 282 (533)
T TIGR01236 207 TATLSNYLTMRIL----EEAGLPPGVINFVPGDGFAVSDVVLADPRLAGIHFTGSTATFKHLWKWVASNLDRYHNFPRIV 282 (533)
T ss_pred cCCHHHHHHHHHH----HhcCCCCCcEEEEecCcHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHhhccccccCCcEE
Confidence 9999999888876 47999999999999964 77888886 999999999999999999999999874 99
Q ss_pred ccCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccC
Q 012790 158 LELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCL 237 (456)
Q Consensus 158 lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~ 237 (456)
+|||||||+||++|||++.|++.+++|+|.|+||+|++++|||||+++||+|+++|+++++++++|+|.++++++||+++
T Consensus 283 lElGGknp~IV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~d~~t~~Gpli~ 362 (533)
T TIGR01236 283 GETGGKDFHVVHPSADIDHAVTATIRGAFEYQGQKCSAASRLYVPHSVWPRFKDELLAELAEVKVGDPDDFSNFMGAVID 362 (533)
T ss_pred EEcCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCCCcCCeeEEEchhHHHHHHHHHHHHHhcCCcCCCCCCCCcccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcC--CeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCC--HHHHHH
Q 012790 238 LEHSEKLQNLVNDALDKG--AEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNT--DEEVVK 313 (456)
Q Consensus 238 ~~~~~~v~~~i~~a~~~G--a~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~--~~eai~ 313 (456)
+.+++++.+++++++++| +++++||... ...|+|++|||+.+++++|++++||+||||++|++|+| +||||+
T Consensus 363 ~~~~~~v~~~i~~a~~~Ga~a~vl~GG~~~----~~~G~~~~PTvl~~~~~d~~i~~eE~FGPVl~v~~~~~~~~~eai~ 438 (533)
T TIGR01236 363 ERSFVKNVKYIERAKGDPAELTILYGGKYD----DSEGYFVEPTVILSKDPTDPLMVEEIFGPVLTVYVYPDDKYKEILD 438 (533)
T ss_pred HHHHHHHHHHHHHHHhcCCceEEEeCCCcC----CCCCeEEeeEEEecCCCCChhhcccCCCCeEEEEEeCCCCHHHHHH
Confidence 999999999999999987 7999999731 23589999999999999999999999999999999998 599999
Q ss_pred HH-hcCCCCceeEEecCCHHHHHHHHHhcc--cCCeeecCCcccccCcCCCccCCCCCCCC-CcchHHHHhccceeeEEE
Q 012790 314 LA-NDSRYGLGCAVFSGSQHRAREIAAQIQ--CGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKSVV 389 (456)
Q Consensus 314 ~~-n~~~~gL~~~vft~d~~~~~~~~~~l~--~G~v~iN~~~~~~~~~~~PfGG~~~SG~G-~~~g~~gl~~ft~~k~v~ 389 (456)
++ |+++|||++||||+|.+.+.+++++++ +|.|+||+...+...+.+||||+|.||+| +++|.+||++||+.|++.
T Consensus 439 ~~~n~~~~gL~a~Vft~d~~~a~~~~~~l~~~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~k~v~ 518 (533)
T TIGR01236 439 VVDSTSRYGLTGAVFAKDRQAILEADKRLRFAAGNFYINDKPTGAVVGQQPFGGARGSGTNDKAGGPLNLLRWTSARSIK 518 (533)
T ss_pred HHhcCCCcCceEEEEeCCHHHHHHHHHHhhhcCcEEEECCCCCCCCCCCCCCCCcccccCCcccCCHHHHHHhcceEEEE
Confidence 99 889999999999999999999999977 99999998766554556899999999998 999999999999999998
Q ss_pred Ecc
Q 012790 390 EDR 392 (456)
Q Consensus 390 ~~~ 392 (456)
...
T Consensus 519 ~~~ 521 (533)
T TIGR01236 519 ETF 521 (533)
T ss_pred EEc
Confidence 765
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate. |
| >cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-82 Score=660.15 Aligned_cols=370 Identities=29% Similarity=0.489 Sum_probs=340.8
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcc--cccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEE
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRS--MIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVI 82 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~Vvl 82 (456)
+..|+..+++.++|++++++++.... .+.... ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+
T Consensus 78 a~~ev~~~~~~l~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VI~ 156 (453)
T cd07094 78 ARVEVDRAIDTLRLAAEEAERIRGEE-IPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVL 156 (453)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcc-ccccccccCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCEEEE
Confidence 34689999999999999998875422 121110 123456788999999999999999999999999999999999999
Q ss_pred ecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCccccc
Q 012790 83 KVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLE 159 (456)
Q Consensus 83 Kps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lE 159 (456)
|||+.+|+++.++++++. ++|+|+|++++++|++ +.++.|++ ++|.|+||||+++|+.|++.+ +++|+++|
T Consensus 157 Kps~~~p~~~~~l~~~l~----~ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a--~~~~~~le 230 (453)
T cd07094 157 KPASKTPLSALELAKILV----EAGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANA--GGKRIALE 230 (453)
T ss_pred ECCCcchHHHHHHHHHHH----HcCCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHc--CCCceEEe
Confidence 999999999999888765 6799999999999976 55888987 799999999999999999988 58999999
Q ss_pred CCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHH
Q 012790 160 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLE 239 (456)
Q Consensus 160 lgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~ 239 (456)
+|||||+||++|||++.|++.|++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.
T Consensus 231 lGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~i~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~ 310 (453)
T cd07094 231 LGGNAPVIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEE 310 (453)
T ss_pred cCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCC
Q 012790 240 HSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSR 319 (456)
Q Consensus 240 ~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~ 319 (456)
+++++++++++++++|+++++||. ..++|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++
T Consensus 311 ~~~~~~~~i~~a~~~Ga~v~~gg~-------~~g~~~~Ptvl~~~~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~ 383 (453)
T cd07094 311 AAERVERWVEEAVEAGARLLCGGE-------RDGALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIANSTD 383 (453)
T ss_pred HHHHHHHHHHHHHHCCCEEEeCcc-------CCCeEEeCEEEeCCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCC
Confidence 999999999999999999999986 2478999999999999999999999999999999999999999999999
Q ss_pred CCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEE
Q 012790 320 YGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389 (456)
Q Consensus 320 ~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~ 389 (456)
|||++||||+|.++++++++++++|.|+||++... ..+.+||||+|+||+|++||++||++||+.|+|+
T Consensus 384 ~gL~~~i~t~d~~~a~~~~~~l~~g~v~iN~~~~~-~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~i~ 452 (453)
T cd07094 384 YGLQAGIFTRDLNVAFKAAEKLEVGGVMVNDSSAF-RTDWMPFGGVKESGVGREGVPYAMEEMTEEKTVV 452 (453)
T ss_pred CCCeeEEECCCHHHHHHHHHhcCcCeEEEcCCCCC-CCCCCCCCCccccccCcCChHHHHHHHhceeEEe
Confidence 99999999999999999999999999999998543 2346899999999999999999999999999985
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. |
| >cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-81 Score=665.44 Aligned_cols=376 Identities=25% Similarity=0.415 Sum_probs=346.0
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++.+++|......... ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 112 a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKP 189 (500)
T cd07083 112 AIDDVAEAIDFIRYYARAALRLRYPAVEVVP--YPGEDNESFYVGLGAGVVISPWNFPVAIFTGMIVAPVAVGNTVIAKP 189 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcccccCC--CCCceEEEEEeccceEEEEcCCccHHHHHHHHHHHHHHcCCeEEEeC
Confidence 4579999999999999999988654321111 12345688999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccC------Cc
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTL------TP 155 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~------~p 155 (456)
|+.+|.++.++++++. ++|+|+|++++|+|++ +.++.|++ ++|+|+||||+.+|+.|++.+++++ +|
T Consensus 190 s~~tp~~~~~l~~~~~----eaGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~v~~~aa~~~~~~~~~~~ 265 (500)
T cd07083 190 AEDAVVVGYKVFEIFH----EAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEAAARLAPGQTWFKR 265 (500)
T ss_pred CCcchHHHHHHHHHHH----HcCCCCCceEEEeCCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHhhccccccccCc
Confidence 9999999999888764 7899999999999964 77888887 9999999999999999999999886 99
Q ss_pred ccccCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccc
Q 012790 156 VTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGAL 235 (456)
Q Consensus 156 v~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl 235 (456)
+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||+
T Consensus 266 v~lElgG~~~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpl 345 (500)
T cd07083 266 LYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAYEPVLERLLKRAERLSVGPPEENGTDLGPV 345 (500)
T ss_pred EEEecCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeC--CHHHHHH
Q 012790 236 CLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN--TDEEVVK 313 (456)
Q Consensus 236 i~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~--~~~eai~ 313 (456)
+++.+++++++++++++++| ++++||... ...|+|++|||+.+++++|++++||+||||++|++|+ |+||||+
T Consensus 346 i~~~~~~~v~~~i~~a~~~g-~vl~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~d~~~~eai~ 420 (500)
T cd07083 346 IDAEQEAKVLSYIEHGKNEG-QLVLGGKRL----EGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKDDDFAEALE 420 (500)
T ss_pred CCHHHHHHHHHHHHHHHhCC-EEEeCCCcC----CCCCeEEccEEEeCCCCCChHhhCCCCCceEEEEEeCCCCHHHHHH
Confidence 99999999999999998877 899998742 2358999999999999999999999999999999999 9999999
Q ss_pred HHhcCCCCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCC-CcchHHHHhccceeeEEEEc
Q 012790 314 LANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 314 ~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G-~~~g~~gl~~ft~~k~v~~~ 391 (456)
++|+++|||++||||+|.+.++++++++++|.|+||+...+...+.+||||+|.||+| +.+|++++++||+.|++...
T Consensus 421 ~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~~~~~k~~~~~ 499 (500)
T cd07083 421 VANSTPYGLTGGVYSRKREHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNAKTGGPHYLRRFLEMKAVAER 499 (500)
T ss_pred HHhCCCCCceEEEEeCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCCccccccCCCcccCHHHHHHhhheeEEEEc
Confidence 9999999999999999999999999999999999999866655556899999999999 67889999999999998753
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. |
| >cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-82 Score=661.46 Aligned_cols=372 Identities=30% Similarity=0.499 Sum_probs=343.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecC
Q 012790 6 LGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 85 (456)
Q Consensus 6 ~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps 85 (456)
..|+..+++.++|+++.++++.... .+.. .....++.++|+|||++|+|||||+.++++++++||++||+||+|||
T Consensus 85 ~~ev~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps 160 (462)
T cd07112 85 AVDVPSAANTFRWYAEAIDKVYGEV-APTG---PDALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPA 160 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCce-ecCC---CCeEEEEEEeeeeeEEEECCCchHHHHHHHHHHHHHHcCCeeeeeCC
Confidence 3599999999999999998876532 1211 23456789999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhh-ccCCcccccCC
Q 012790 86 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNAS-KTLTPVTLELG 161 (456)
Q Consensus 86 ~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa-~~~~pv~lElg 161 (456)
+.+|+++..+++++ .++|+|+|++++|+|++ +.+..|+. ++|.|+||||+++|+.|++.++ +++||+++|+|
T Consensus 161 ~~~p~~~~~l~~~~----~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~lelg 236 (462)
T cd07112 161 EQSPLTALRLAELA----LEAGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECG 236 (462)
T ss_pred CCCCHHHHHHHHHH----HhcCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHHhcCCEEEecCC
Confidence 99999999888775 47999999999999965 67888886 9999999999999999999998 58999999999
Q ss_pred CcceEEEcCCC-CHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHH
Q 012790 162 GKDAFIVCDDV-DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 240 (456)
Q Consensus 162 Gk~p~iV~~da-Dl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~ 240 (456)
||||+||++|+ |++.|++.|++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++++
T Consensus 237 G~n~~iV~~da~dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~ 316 (462)
T cd07112 237 GKSPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPGDPLDPATRMGALVSEAH 316 (462)
T ss_pred CCCeEEECCCCcCHHHHHHHHHHHHHhccCCCCCCCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHH
Confidence 99999999999 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCC
Q 012790 241 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRY 320 (456)
Q Consensus 241 ~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~ 320 (456)
+++++++|++++++|+++++||..... ...|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|
T Consensus 317 ~~~v~~~v~~a~~~Ga~v~~gg~~~~~--~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~ 394 (462)
T cd07112 317 FDKVLGYIESGKAEGARLVAGGKRVLT--ETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVY 394 (462)
T ss_pred HHHHHHHHHHHHHCCCEEEeCCccCCC--CCCCeEEeeEEecCCCCCChHHhCCCCCceEEEEEeCCHHHHHHHHhCCCc
Confidence 999999999999999999999974211 235889999999999999999999999999999999999999999999999
Q ss_pred CceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEE
Q 012790 321 GLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389 (456)
Q Consensus 321 gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~ 389 (456)
||++||||+|.+.++++++++++|.|+||+.... .+.+||||+|+||+|++||++|+++||+.|++.
T Consensus 395 gL~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~i~ 461 (462)
T cd07112 395 GLAASVWTSDLSRAHRVARRLRAGTVWVNCFDEG--DITTPFGGFKQSGNGRDKSLHALDKYTELKTTW 461 (462)
T ss_pred cceEEEEcCCHHHHHHHHHhcCcceEEECCCCCC--CCCCCCCCcccccCCccchHHHHHHHhceeEEE
Confidence 9999999999999999999999999999986442 456899999999999999999999999999985
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. |
| >TIGR01804 BADH glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-82 Score=662.27 Aligned_cols=371 Identities=30% Similarity=0.498 Sum_probs=339.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecC
Q 012790 6 LGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 85 (456)
Q Consensus 6 ~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps 85 (456)
..|+..+++.++|+++.+++.... ..+.. .....+++++|+|||++|+|||||+.++++++++||++||+||+|||
T Consensus 94 ~~ev~~~~~~l~~~a~~~~~~~~~-~~~~~---~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps 169 (467)
T TIGR01804 94 VADMDDIADVFEFFAGLADKDGGE-IIPLP---IPSFSYTIREPLGVCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPS 169 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCc-cccCC---CCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCC
Confidence 569999999999999988774322 11111 12346899999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCC-hHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCC
Q 012790 86 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162 (456)
Q Consensus 86 ~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~-~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgG 162 (456)
+.+|.++..+++++ .++|+|+|++|+|+|+ .+.++.|+. ++|.|+||||+++|+.|++++++++||+++||||
T Consensus 170 ~~tp~~~~~l~~~~----~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~l~~~~lElGG 245 (467)
T TIGR01804 170 EITPLTALKVAELM----EEAGLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGVPTGKKIMAAAADHLKHVTMELGG 245 (467)
T ss_pred ccCcHHHHHHHHHH----HHcCcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEecCC
Confidence 99999999888775 4789999999999997 477888887 7999999999999999999999999999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHH
Q 012790 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 242 (456)
Q Consensus 163 k~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~ 242 (456)
|||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++
T Consensus 246 ~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~ 325 (467)
T TIGR01804 246 KSPLIVFDDADLELAVDQAMNGNFFSAGQVCSNGTRVFVHNKIKEKFEARLVERTKRIKLGDGFDEATEMGPLISAEHRD 325 (467)
T ss_pred CCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCCEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCccCccCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCc
Q 012790 243 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 322 (456)
Q Consensus 243 ~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL 322 (456)
+++++|++++++|+++++||..........|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||
T Consensus 326 ~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL 405 (467)
T TIGR01804 326 KVESYIEKGKEEGATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMTIVREEIFGPVMTVLTFSSEDEVIARANDTIYGL 405 (467)
T ss_pred HHHHHHHHHHHCCCEEEeCCCccccccCCCCeEEeeEEEeCCCCCChHHhCCCCCceEEEEecCCHHHHHHHHhCCCCCc
Confidence 99999999999999999999742211113589999999999999999999999999999999999999999999999999
Q ss_pred eeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceee
Q 012790 323 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVK 386 (456)
Q Consensus 323 ~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k 386 (456)
++||||+|.++++++++++++|.|+||++... .+.+||||+|+||+|++||++|+++||+.|
T Consensus 406 sa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~pfGG~k~SG~G~~~g~~~~~~~~~~~ 467 (467)
T TIGR01804 406 AAGVFTADLGRAHRVANQLKAGTVWINDFHPY--PAEAPWGGYKQSGIGRENGKAGLAEYTEVK 467 (467)
T ss_pred eEEEECCCHHHHHHHHHhCCcceEEECCCCCC--CCCCCcCCcccCccCCCChHHHHHHHhccC
Confidence 99999999999999999999999999986543 345899999999999999999999999865
|
Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171). |
| >cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-81 Score=659.34 Aligned_cols=370 Identities=32% Similarity=0.484 Sum_probs=342.3
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++++++.++++... ..+.. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 78 a~~ev~~~~~~l~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKp 154 (451)
T cd07150 78 AWFETTFTPELLRAAAGECRRVRGE-TLPSD--SPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKP 154 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCc-cccCC--CCCceeEEEEecccEEEEECCCccHHHHHHHHHHHHHhcCCeEEEEC
Confidence 4568999999999999888765322 11211 12345689999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg 161 (456)
|+.+|.++.++.+++ .++|+|+|++++|+|++ +.++.|+. ++|+|+||||+.+|+.|++.++++++|+++|||
T Consensus 155 s~~~p~t~~~l~~~~----~~ag~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~lelG 230 (451)
T cd07150 155 SEETPVIGLKIAEIM----EEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGRHLKKITLELG 230 (451)
T ss_pred CccCcHHHHHHHHHH----HHhCCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCceEeecC
Confidence 999999998888776 47899999999999964 67888886 999999999999999999999999999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
||||+||++|||++.|++.|++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.++
T Consensus 231 G~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~ 310 (451)
T cd07150 231 GKNPLIVLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRDPDTVIGPLISPRQV 310 (451)
T ss_pred CCCeeEECCCCChHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCC
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 321 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~g 321 (456)
+++.+++++++++|+++++||. .+|+|++|||+.++++||++++||+||||++|++|+|+||||+++|+++||
T Consensus 311 ~~v~~~i~~a~~~Ga~vl~gg~-------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~g 383 (451)
T cd07150 311 ERIKRQVEDAVAKGAKLLTGGK-------YDGNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYG 383 (451)
T ss_pred HHHHHHHHHHHhCCCEEEeCCc-------cCCcEEcCEEEeCCCCCCHHHhCCCcCceEEEEEeCCHHHHHHHHhCCCCC
Confidence 9999999999999999999986 248899999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEE
Q 012790 322 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389 (456)
Q Consensus 322 L~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~ 389 (456)
|++||||+|.++++++++++++|.|+||++..+. .+.+||||+|+||+|++||++|+++||+.|+|+
T Consensus 384 L~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~-~~~~pfgG~~~SG~G~~~g~~~l~~~~~~k~v~ 450 (451)
T cd07150 384 LSAAILTNDLQRAFKLAERLESGMVHINDPTILD-EAHVPFGGVKASGFGREGGEWSMEEFTELKWIT 450 (451)
T ss_pred CeEEEEeCCHHHHHHHHHhcCcCEEEECCCCCCC-CCCCCcCCccccccCcCCcHHHHHHhheeeEEe
Confidence 9999999999999999999999999999986553 456899999999999999999999999999985
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. |
| >cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-81 Score=657.96 Aligned_cols=371 Identities=27% Similarity=0.454 Sum_probs=339.9
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCccc-CCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEe
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYR-SSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIK 83 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlK 83 (456)
+..|+..+++.++|+++.+.+|...... .......+...+++++|+|||++|+|||||+.+.++++++||++||+||+|
T Consensus 78 a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlK 157 (452)
T cd07147 78 ARGEVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLK 157 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCCCcHHHHHHHHHHHHHHcCCEEEEE
Confidence 4469999999999999998877532211 110001234567889999999999999999999999999999999999999
Q ss_pred cCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCC
Q 012790 84 VSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 84 ps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg 161 (456)
||+.+|.++.++++++. ++|+|+|++|+++|+.+.+..|+. ++|.|+||||+++|+.|++.+++ +|+++|||
T Consensus 158 ps~~~p~~~~~l~~~l~----~ag~P~g~v~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~v~~~a~~--~~v~lelg 231 (452)
T cd07147 158 PASRTPLSALILGEVLA----ETGLPKGAFSVLPCSRDDADLLVTDERIKLLSFTGSPAVGWDLKARAGK--KKVVLELG 231 (452)
T ss_pred CCCCCcHHHHHHHHHHH----HcCCCcCcEEEEeCCccchhHHhcCCCCCEEEEECCHHHHHHHHHHhCc--CceEeecC
Confidence 99999999998888764 689999999999998778888886 99999999999999999998874 79999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
||||+||++|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.++
T Consensus 232 G~~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~ 311 (452)
T cd07147 232 GNAAVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEA 311 (452)
T ss_pred CCCcEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEchhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCC
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 321 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~g 321 (456)
+++++++++++++|+++++||.. +|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 312 ~~~~~~i~~a~~~Ga~~l~gg~~-------~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~g 384 (452)
T cd07147 312 ERVEGWVNEAVDAGAKLLTGGKR-------DGALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFG 384 (452)
T ss_pred HHHHHHHHHHHHCCCEEEecCCc-------CCEEEcCEEEeCCCCCChHHhCcCcCCeEEEEEeCCHHHHHHHHhCCCCC
Confidence 99999999999999999999872 48899999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEE
Q 012790 322 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389 (456)
Q Consensus 322 L~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~ 389 (456)
|++||||+|.++++++++++++|.|+||+..... ...+||||+|+||+|++||++||++||+.|+|+
T Consensus 385 L~~~v~t~d~~~a~~~~~~~~~G~v~vN~~~~~~-~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~i~ 451 (452)
T cd07147 385 LQAGVFTRDLEKALRAWDELEVGGVVINDVPTFR-VDHMPYGGVKDSGIGREGVRYAIEEMTEPRLLV 451 (452)
T ss_pred ceEEEECCCHHHHHHHHHHcCcceEEECCCCCCC-CCCCCcCCccccccCCCChHHHHHHhcceeEEe
Confidence 9999999999999999999999999999975432 345899999999999999999999999999985
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. |
| >PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-81 Score=665.14 Aligned_cols=373 Identities=26% Similarity=0.425 Sum_probs=343.1
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|++++++++.+.+.... ..+...+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 130 a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~---~~g~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKP 206 (514)
T PRK03137 130 ADADTAEAIDFLEYYARQMLKLADGKPVES---RPGEHNRYFYIPLGVGVVISPWNFPFAIMAGMTLAAIVAGNTVLLKP 206 (514)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCccccC---CCCceEEEEEecCcEEEEECCCccHHHHHHHHHHHHHHcCCEEEEEC
Confidence 446999999999999999988764432211 12345789999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhc------cCCc
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASK------TLTP 155 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~------~~~p 155 (456)
|+.+|+++..+.+++ .++|+|+|++|+|+|++ +.++.|++ ++|+|+||||+.+|+.|++.|++ ++||
T Consensus 207 s~~tp~~a~~l~~~l----~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~~~l~~ 282 (514)
T PRK03137 207 ASDTPVIAAKFVEVL----EEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYERAAKVQPGQIWLKR 282 (514)
T ss_pred CCCCcHHHHHHHHHH----HHhCCCCCcEEEeecCchHHHHHHhcCCCcCEEEEECCcHHHHHHHHHHhcccccccccce
Confidence 999999998888775 47899999999999965 67888887 89999999999999999999986 7899
Q ss_pred ccccCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccc
Q 012790 156 VTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGAL 235 (456)
Q Consensus 156 v~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl 235 (456)
+++|||||||+||++|||++.|++.|++++|.|+||.|++++|||||++++|+|+++|++.++++++|+|.++. ++||+
T Consensus 283 v~lElgGk~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~~~-~~Gpl 361 (514)
T PRK03137 283 VIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVYDEVLEKVVELTKELTVGNPEDNA-YMGPV 361 (514)
T ss_pred EEecCCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCccCeEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCcc-CcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988 99999
Q ss_pred cCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHH
Q 012790 236 CLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLA 315 (456)
Q Consensus 236 i~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~ 315 (456)
+++.+++++.++|++++++ +++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|++|||+++
T Consensus 362 i~~~~~~~v~~~v~~a~~~-~~vl~Gg~~~----~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~ 436 (514)
T PRK03137 362 INQASFDKIMSYIEIGKEE-GRLVLGGEGD----DSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAKDFDHALEIA 436 (514)
T ss_pred CCHHHHHHHHHHHHHHHhC-CEEEeCCCcC----CCCceEEeeEEEeCCCCCCHHHhCCCCCceEEEEecCCHHHHHHHH
Confidence 9999999999999999877 6999998731 2358999999999999999999999999999999999999999999
Q ss_pred hcCCCCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCC-CcchHHHHhccceeeEEEE
Q 012790 316 NDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKSVVE 390 (456)
Q Consensus 316 n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G-~~~g~~gl~~ft~~k~v~~ 390 (456)
|+++|||++||||+|.+.++++++++++|.|+||+...+...+.+||||+|.||+| +.+|.+++++||+.|+|..
T Consensus 437 N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~l~~ft~~k~v~~ 512 (514)
T PRK03137 437 NNTEYGLTGAVISNNREHLEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTDSKAGGPDYLLLFLQAKTVSE 512 (514)
T ss_pred hCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccCCHHHHHHhceEEEEEE
Confidence 99999999999999999999999999999999998766655556899999999999 6889999999999999865
|
|
| >PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-81 Score=661.22 Aligned_cols=370 Identities=29% Similarity=0.523 Sum_probs=341.5
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecC
Q 012790 6 LGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 85 (456)
Q Consensus 6 ~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps 85 (456)
..|+..+++.++|+++.++++.+... +.. .+...+++++|+|||++|+|||||+.++++++++||++||+||+|||
T Consensus 118 ~~ev~~~~~~l~~~a~~~~~~~g~~~-~~~---~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps 193 (494)
T PRK09847 118 RDDIPGAARAIRWYAEAIDKVYGEVA-TTS---SHELAMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPS 193 (494)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCccc-cCC---CCceeEEEecceeEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCC
Confidence 45999999999999999988764321 211 23356889999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhh-ccCCcccccCC
Q 012790 86 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNAS-KTLTPVTLELG 161 (456)
Q Consensus 86 ~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa-~~~~pv~lElg 161 (456)
+.+|.++..+++++ .++|+|+|++|+|+|++ +.+..|+. ++|.|+||||+.+|+.|++.|+ ++++|+++|||
T Consensus 194 ~~~p~~~~~l~~~~----~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~v~fTGs~~~g~~v~~~aa~~~~~~~~lElG 269 (494)
T PRK09847 194 EKSPLSAIRLAGLA----KEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDSNMKRVWLEAG 269 (494)
T ss_pred CCChHHHHHHHHHH----HHcCcCcCcEEEEeCCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhhCCCeEEEecC
Confidence 99999998888775 57999999999999964 67888887 8999999999999999999998 58999999999
Q ss_pred CcceEEEcCCC-CHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHH
Q 012790 162 GKDAFIVCDDV-DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 240 (456)
Q Consensus 162 Gk~p~iV~~da-Dl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~ 240 (456)
||||+||++|+ |++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+
T Consensus 270 Gk~~~iV~~daaDl~~Aa~~i~~~~~~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~ 349 (494)
T PRK09847 270 GKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGHPLDPATTMGTLIDCAH 349 (494)
T ss_pred CCCeeEEcCCccCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCcCHHH
Confidence 99999999997 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCC
Q 012790 241 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRY 320 (456)
Q Consensus 241 ~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~ 320 (456)
++++.++|++++++| ++++||.. ...+.|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|
T Consensus 350 ~~~v~~~v~~a~~~G-~i~~gg~~-----~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~ 423 (494)
T PRK09847 350 ADSVHSFIREGESKG-QLLLDGRN-----AGLAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQALQLANDSQY 423 (494)
T ss_pred HHHHHHHHHHHHHCC-eEEECCcc-----CCCCceEeeEEEeCCCCCChHHhCcCcCceEEEEecCCHHHHHHHHhCCCC
Confidence 999999999999999 99999873 235789999999999999999999999999999999999999999999999
Q ss_pred CceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEc
Q 012790 321 GLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 321 gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~ 391 (456)
||++||||+|.+.++++++++++|.|+||++... .+.+||||+|.||+|++||.+|+++||+.|+|...
T Consensus 424 gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~ 492 (494)
T PRK09847 424 GLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDG--DMTVPFGGYKQSGNGRDKSLHALEKFTELKTIWIS 492 (494)
T ss_pred CceEEEEcCCHHHHHHHHHhCCcceEEECCCCCC--CCCCCcCCCcccccCccchHHHHHHhhceEEEEEe
Confidence 9999999999999999999999999999996543 34589999999999999999999999999998753
|
|
| >PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-81 Score=660.18 Aligned_cols=373 Identities=24% Similarity=0.406 Sum_probs=339.4
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++.+.++..+.. .. ..+...+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 94 a~~ev~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKP 169 (487)
T PRK09457 94 AATEVTAMINKIAISIQAYHERTGEKR-SE---MADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKP 169 (487)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcee-cc---CCCceeEEEEeccEEEEEECCCchHHHHHHHHHHHHHHcCCEEEEEC
Confidence 346999999999999998887765432 11 12345689999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhcc-CCcccccCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKT-LTPVTLELG 161 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~-~~pv~lElg 161 (456)
|+.+|+++.++++++. ++|+|+|++++|+|+.+.+..|++ ++|+|+||||+++|+.|+++++++ .++++||||
T Consensus 170 s~~tp~t~~~l~~l~~----~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~~~~lElG 245 (487)
T PRK09457 170 SELTPWVAELTVKLWQ----QAGLPAGVLNLVQGGRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQPEKILALEMG 245 (487)
T ss_pred CCCCcHHHHHHHHHHH----HhCcCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcCCCcEEEecC
Confidence 9999999998888764 689999999999997788888987 999999999999999999987765 578899999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhH-HHHHHHHHHHHhccccCCCC-CCCCccccccCHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIY-ALFVSQVAKIVKSVSAGPPL-AGKYDMGALCLLE 239 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~-d~f~~~l~~~~~~~~~g~~~-~~~~~~gpli~~~ 239 (456)
||||+||++|||++.|++.+++++|.|+||.|++++|||||+++| |+|+++|+++++++++|+|. ++++++||+++.+
T Consensus 246 Gk~p~IV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~vG~p~~~~~~~~Gpli~~~ 325 (487)
T PRK09457 246 GNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLARLVAVAKRLTVGRWDAEPQPFMGAVISEQ 325 (487)
T ss_pred CCCeEEECCCCCHHHHHHHHHHHHhhccCCCCCCCceEEEeccccHHHHHHHHHHHHhcCcCCCCCcCCCCccCCCcCHH
Confidence 999999999999999999999999999999999999999999998 99999999999999999996 7889999999999
Q ss_pred HHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCC
Q 012790 240 HSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSR 319 (456)
Q Consensus 240 ~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~ 319 (456)
+++++.+++++++++|+++++||... +..|+|++|||+ +++++|++++||+||||++|++|+|+||||+++|+++
T Consensus 326 ~~~~v~~~i~~a~~~Ga~~~~gg~~~----~~~g~~~~PTvl-~v~~~~~i~~eE~FGPVl~V~~~~~~deai~~~N~~~ 400 (487)
T PRK09457 326 AAQGLVAAQAQLLALGGKSLLEMTQL----QAGTGLLTPGII-DVTGVAELPDEEYFGPLLQVVRYDDFDEAIRLANNTR 400 (487)
T ss_pred HHHHHHHHHHHHHHCCCEEEeCCCcc----CCCCeeEecEEe-ccCCCChHHhCCCcCCeEEEEEeCCHHHHHHHHhCCC
Confidence 99999999999999999999988632 245799999999 7999999999999999999999999999999999999
Q ss_pred CCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEcc
Q 012790 320 YGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 320 ~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~ 392 (456)
|||++||||+|.+.++++++++++|.|+||+..... .+.+||||+|+||+|+++|..+ .+|+..|++..+.
T Consensus 401 ~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~-~~~~PfGG~k~SG~G~~~g~~~-~~~~~~k~~~~~~ 471 (487)
T PRK09457 401 FGLSAGLLSDDREDYDQFLLEIRAGIVNWNKPLTGA-SSAAPFGGVGASGNHRPSAYYA-ADYCAYPMASLES 471 (487)
T ss_pred CCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCC-CCCCCCCCcccccCCCCCchhH-hhheeeeEEEEec
Confidence 999999999999999999999999999999875543 3568999999999999999666 4599999988764
|
|
| >cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-81 Score=657.96 Aligned_cols=368 Identities=30% Similarity=0.480 Sum_probs=340.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecC
Q 012790 6 LGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 85 (456)
Q Consensus 6 ~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps 85 (456)
..|+..+++.++|+++.++++..+.. ....+++++|+|||++|+|||||+.++++++++||++||+||+|||
T Consensus 95 ~~ev~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps 166 (466)
T cd07138 95 AAQVGLGIGHLRAAADALKDFEFEER--------RGNSLVVREPIGVCGLITPWNWPLNQIVLKVAPALAAGCTVVLKPS 166 (466)
T ss_pred HHHHHHHHHHHHHHHHhhhhcccccc--------CceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCEEEEECC
Confidence 35888899999999999887654321 1245788999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCC
Q 012790 86 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162 (456)
Q Consensus 86 ~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgG 162 (456)
+.+|+++.++.+++ .++|+|+|++++|+|++ +.++.|++ ++|.|+||||+++|+.|++.++++++|+++||||
T Consensus 167 ~~~p~~~~~l~~~~----~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~v~lElgG 242 (466)
T cd07138 167 EVAPLSAIILAEIL----DEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAADTVKRVALELGG 242 (466)
T ss_pred CcCcHHHHHHHHHH----HHcCCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCeEEEECCC
Confidence 99999998888775 47999999999999976 57888887 8999999999999999999999999999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHH
Q 012790 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 242 (456)
Q Consensus 163 k~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~ 242 (456)
|||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++
T Consensus 243 ~~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~ 322 (466)
T cd07138 243 KSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAYVVGDPRDPATTLGPLASAAQFD 322 (466)
T ss_pred CCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCcCCccCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCc
Q 012790 243 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 322 (456)
Q Consensus 243 ~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL 322 (456)
++++++++++++|+++++||..... ....|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||
T Consensus 323 ~~~~~v~~a~~~Ga~~l~gg~~~~~-~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL 401 (466)
T cd07138 323 RVQGYIQKGIEEGARLVAGGPGRPE-GLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAIANDTPYGL 401 (466)
T ss_pred HHHHHHHHHHHCCCEEEeCCCcCCC-cCCCCceECCEEecCCCCCChHHhCCCCCceEEEeccCCHHHHHHHHhCCCCCc
Confidence 9999999999999999999963110 013589999999999999999999999999999999999999999999999999
Q ss_pred eeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEE
Q 012790 323 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389 (456)
Q Consensus 323 ~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~ 389 (456)
++||||+|.+.++++++++++|.|+||+.. ..+.+||||+|.||+|+++|++|+++||+.|+|+
T Consensus 402 ~a~i~t~d~~~a~~~~~~l~~G~v~iN~~~---~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~ 465 (466)
T cd07138 402 AGYVWSADPERARAVARRLRAGQVHINGAA---FNPGAPFGGYKQSGNGREWGRYGLEEFLEVKSIQ 465 (466)
T ss_pred eEEEEcCCHHHHHHHHHhcCcceEEECCCC---CCCCCCcCCcccccCCccchHHHHHHhcceeEEe
Confidence 999999999999999999999999999853 2456899999999999999999999999999875
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. |
| >cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-81 Score=657.91 Aligned_cols=373 Identities=32% Similarity=0.523 Sum_probs=342.1
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|++..+++..... .+.. ..+...+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 92 a~~ev~~~~~~l~~~~~~a~~~~~~~-~~~~--~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VVlKp 168 (468)
T cd07088 92 ARVEVEFTADYIDYMAEWARRIEGEI-IPSD--RPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPALVTGNTIVIKP 168 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcc-ccCc--cccceeEEEEecceeEEEEccCchHHHHHHHHHHHHHHcCCEEEEEC
Confidence 45689999999999998776643321 1111 11345688999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg 161 (456)
|+.+|.++..+++++. ++|+|+|++++|+|++ +.++.|++ ++|.|+||||+.+|+.|++.++++++|+++|+|
T Consensus 169 s~~~p~~~~~l~~~~~----~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~lelG 244 (468)
T cd07088 169 SEETPLNALEFAELVD----EAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAENITKVSLELG 244 (468)
T ss_pred CCcchHHHHHHHHHHH----HcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECC
Confidence 9999999988887764 6899999999999976 57788887 899999999999999999999999999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.++
T Consensus 245 G~~~~iV~~dadl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~ 324 (468)
T cd07088 245 GKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGDPFDAATDMGPLVNEAAL 324 (468)
T ss_pred CCCeEEECCCCCHHHHHHHHHHHHhcccCcCCcCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCccCcccCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCC
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 321 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~g 321 (456)
++++++|++++++|+++++||.... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 325 ~~~~~~i~~a~~~ga~vl~gg~~~~---~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~g 401 (468)
T cd07088 325 DKVEEMVERAVEAGATLLTGGKRPE---GEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELANDSEYG 401 (468)
T ss_pred HHHHHHHHHHHHCCCEEEeCCCCCC---CCCceeEcCEEEecCCCCCchhhCCCcCCeEEEEecCCHHHHHHHHhCCCCC
Confidence 9999999999999999999997421 1358999999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEE
Q 012790 322 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389 (456)
Q Consensus 322 L~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~ 389 (456)
|++||||+|.+.++++++++++|.|+||+..... ...||||+|.||+|++||++|+++||+.|+|.
T Consensus 402 L~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~--~~~p~gG~k~SG~G~~~g~~~l~~~t~~k~v~ 467 (468)
T cd07088 402 LTSYIYTENLNTAMRATNELEFGETYINRENFEA--MQGFHAGWKKSGLGGADGKHGLEEYLQTKVVY 467 (468)
T ss_pred ceEEEECCCHHHHHHHHHhCCcceEEECCCCCCC--CCCCcCCcccccCCcCchHHHHHHHhceeEEe
Confidence 9999999999999999999999999999876543 23699999999999999999999999999985
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. |
| >cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-81 Score=655.81 Aligned_cols=374 Identities=32% Similarity=0.524 Sum_probs=341.1
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++..++ +..+..+.. .....++.++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 77 a~~ev~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKp 152 (457)
T cd07108 77 ARPEAAVLADLFRYFGGLAGE-LKGETLPFG---PDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKA 152 (457)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hCCceeccC---CCeeEEEEeecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEEC
Confidence 457999999999999887654 433333221 2345678999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg 161 (456)
|+.+|.++.++.+++.++ +|+|++++|+|++ +.++.|++ ++|+|+||||+.+|+.|++.++++++|+++|+|
T Consensus 153 s~~~p~~~~~l~~~~~~~-----lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~~~aa~~l~~~~lelg 227 (457)
T cd07108 153 AEDAPLAVLLLAEILAQV-----LPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADRLIPVSLELG 227 (457)
T ss_pred CCCCcHHHHHHHHHHHHh-----CCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHhccCCeEEEECC
Confidence 999999999999888643 9999999999964 67888886 799999999999999999999999999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHH-HhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRA-ALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 240 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~-~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~ 240 (456)
||||+||++|||++.|++.++++ +|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+
T Consensus 228 G~~~~iV~~dAdl~~Aa~~iv~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~ 307 (457)
T cd07108 228 GKSPMIVFPDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEATDIGAIISEKQ 307 (457)
T ss_pred CCCeeEECCCCCHHHHHHHHHHhhHhhcCCCCCCCCeEEEEehHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHH
Confidence 99999999999999999999999 59999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHh-cCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCC
Q 012790 241 SEKLQNLVNDALD-KGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSR 319 (456)
Q Consensus 241 ~~~v~~~i~~a~~-~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~ 319 (456)
+++++++++++++ +|+++++||..........|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++
T Consensus 308 ~~~~~~~i~~a~~~~ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~ 387 (457)
T cd07108 308 FAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSH 387 (457)
T ss_pred HHHHHHHHHHHHhCCCCEEEeCCCcCccCCCCCceEECCEEEecCCCCChhhhcCCCCceEEeecCCCHHHHHHHHhCCC
Confidence 9999999999998 999999999743221224689999999999999999999999999999999999999999999999
Q ss_pred CCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHH-HhccceeeEEE
Q 012790 320 YGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEG-LRACCLVKSVV 389 (456)
Q Consensus 320 ~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~g-l~~ft~~k~v~ 389 (456)
|||++||||+|.++++++++++++|.|+||++... .+.+||||+|+||+|+++|.++ +++||+.|+++
T Consensus 388 ~gLs~~vft~d~~~a~~~~~~l~~g~v~iN~~~~~--~~~~pfGG~k~SG~G~~~g~~~~~~~f~~~k~i~ 456 (457)
T cd07108 388 YGLAAYVWTRDLGRALRAAHALEAGWVQVNQGGGQ--QPGQSYGGFKQSGLGREASLEGMLEHFTQKKTVN 456 (457)
T ss_pred cCceeEEEcCCHHHHHHHHHhcCcceEEECCCCCC--CCCCCcCCcccCcCCCCccchhHHHHhhceEEEe
Confidence 99999999999999999999999999999998543 4568999999999999999977 69999999975
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. |
| >PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-81 Score=659.45 Aligned_cols=371 Identities=28% Similarity=0.447 Sum_probs=337.4
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCccc----ccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeE
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSM----IHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGI 80 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~V 80 (456)
+..|+..+++.++|+++++.+++.+........+ .+...+++++|+|||++|+|||||+.++++++++||++||+|
T Consensus 110 a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~V 189 (496)
T PLN00412 110 AVTEVVRSGDLISYTAEEGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNAV 189 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCccCCceeEEEEecceEEEEECCCCchHHHHHHHHHHHHHcCCEE
Confidence 4579999999999999998887643221111000 112357899999999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCccc
Q 012790 81 VIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVT 157 (456)
Q Consensus 81 vlKps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~ 157 (456)
|+|||+.+|.++..+++++ .++|+|+|++|+|+|++ +.+..|.. ++|.|.|||| .+|+.|++.++ ++|++
T Consensus 190 IlKPs~~t~~~~~~l~~~l----~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs-~~g~~v~~~a~--~~~~~ 262 (496)
T PLN00412 190 VLKPPTQGAVAALHMVHCF----HLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGG-DTGIAISKKAG--MVPLQ 262 (496)
T ss_pred EEECCccCcHHHHHHHHHH----HHhCCCcccEEEEecCchHHHHHHhcCCCcCEEEEeCh-HHHHHHHHHhC--CCcEE
Confidence 9999999999998888876 47899999999999965 67888887 7999999999 99999999886 79999
Q ss_pred ccCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccC
Q 012790 158 LELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCL 237 (456)
Q Consensus 158 lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~ 237 (456)
+|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+ ++++||+++
T Consensus 263 lElGG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gp~i~ 341 (496)
T PLN00412 263 MELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLTVGPPED-DCDITPVVS 341 (496)
T ss_pred EEcCCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEcHHHHHHHHHHHHHHHHhCccCCCcc-cCCcCCCcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999976 789999999
Q ss_pred HHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhc
Q 012790 238 LEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAND 317 (456)
Q Consensus 238 ~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~ 317 (456)
+++++++.++|++++++|+++++||. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+
T Consensus 342 ~~~~~~v~~~i~~a~~~Ga~~l~~~~-------~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~deai~~an~ 414 (496)
T PLN00412 342 ESSANFIEGLVMDAKEKGATFCQEWK-------REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNA 414 (496)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEecCC-------CCCeEEecEEEeCCCCCCHHHhCcCCCCeEEEEEeCCHHHHHHHHhC
Confidence 99999999999999999999998775 35899999999999999999999999999999999999999999999
Q ss_pred CCCCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEc
Q 012790 318 SRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 318 ~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~ 391 (456)
++|||++||||+|.++++++++++++|.|+||++... ..+.+||||+|.||+|++||++|+++||+.|+++.+
T Consensus 415 ~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~-~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~i~~~ 487 (496)
T PLN00412 415 SNFGLQGCVFTRDINKAILISDAMETGTVQINSAPAR-GPDHFPFQGLKDSGIGSQGITNSINMMTKVKSTVIN 487 (496)
T ss_pred CCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCC-CCCCCCCCCccccccCCCChHHHHHHhcceEEEEEe
Confidence 9999999999999999999999999999999987543 234589999999999999999999999999999764
|
|
| >cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-81 Score=650.92 Aligned_cols=366 Identities=25% Similarity=0.400 Sum_probs=336.5
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++.+++|..++..+. .....+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 57 a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kp 132 (431)
T cd07095 57 AQTEVAAMAGKIDISIKAYHERTGERATPM----AQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKP 132 (431)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcccCC----CCceEEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeC
Confidence 356999999999999999988875543222 2356789999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhcc-CCcccccCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKT-LTPVTLELG 161 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~-~~pv~lElg 161 (456)
|+.+|+++.++.+++ .++|+|+|++++|+|+.+.+..|++ ++|.|+||||+++|+.|++.++.+ +++++||||
T Consensus 133 s~~~~~~~~~l~~~~----~~ag~P~g~~~~v~g~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lElg 208 (431)
T cd07095 133 SELTPAVAELMVELW----EEAGLPPGVLNLVQGGRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMG 208 (431)
T ss_pred CCCCcHHHHHHHHHH----HHhCcChhHheEEeCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhccCCCcEEEECC
Confidence 999999998887775 4789999999999997778888887 799999999999999999987754 699999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehh-hHHHHHHHHHHHHhccccCCCCCCCCccccccCHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD-IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 240 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~ 240 (456)
||||+||++|||++.|++.+++++|.|+||.|++++|||||++ ++|+|+++|+++++++++|+|.++++++||++++.+
T Consensus 209 G~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~ 288 (431)
T cd07095 209 GNNPLVVWDVADIDAAAYLIVQSAFLTAGQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAA 288 (431)
T ss_pred CCCeEEECCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcCcchHHHHHHHHHHHHHhCCCCCCCCCCCCcccccCHHH
Confidence 9999999999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCC
Q 012790 241 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRY 320 (456)
Q Consensus 241 ~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~ 320 (456)
++++.+++++++++|+++++||... +..|+|++|||+ +++++|.+++||+||||++|++|+|+||||+++|+++|
T Consensus 289 ~~~i~~~v~~a~~~ga~~l~gg~~~----~~~g~~~~Ptv~-~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~ 363 (431)
T cd07095 289 AARYLLAQQDLLALGGEPLLAMERL----VAGTAFLSPGII-DVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRF 363 (431)
T ss_pred HHHHHHHHHHHHhcCCEEEeCCCcC----CCCCeEEcCEEE-ecCCCChHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCC
Confidence 9999999999999999999999642 246899999999 69999999999999999999999999999999999999
Q ss_pred CceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccce
Q 012790 321 GLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCL 384 (456)
Q Consensus 321 gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~ 384 (456)
||++||||+|.+.++++++++++|.|+||+..... .+.+||||+|+||+|+++|.+|++.|+.
T Consensus 364 gL~a~v~s~d~~~a~~~~~~l~~G~v~iN~~~~~~-~~~~PfGG~k~SG~G~~~g~~~~~~~~~ 426 (431)
T cd07095 364 GLSAGLLSDDEALFERFLARIRAGIVNWNRPTTGA-SSTAPFGGVGLSGNHRPSAYYAADYCAY 426 (431)
T ss_pred CCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCC-CCCCCCCCcccccCCCCChHHHHHHHhh
Confidence 99999999999999999999999999999865433 3558999999999999999999995543
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. |
| >cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-81 Score=649.75 Aligned_cols=374 Identities=33% Similarity=0.583 Sum_probs=345.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecC
Q 012790 6 LGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 85 (456)
Q Consensus 6 ~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps 85 (456)
..|+..+++.++|+++++.++.+++....+....+...++.++|+|||++|+|||||+.++++++++||++||+||+|||
T Consensus 57 ~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps 136 (433)
T cd07134 57 LTEILPVLSEINHAIKHLKKWMKPKRVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPS 136 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcccCCccccCCCceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECC
Confidence 36999999999999999888776543322221224457899999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh-ccCEEEecCCHHHHHHHHHHhhccCCcccccCCCcc
Q 012790 86 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD 164 (456)
Q Consensus 86 ~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~-~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgGk~ 164 (456)
+.+|.++.++.+++.+ + +|+|++++++|+.+.+..|++ .+|.|.||||+.+|+.|++.++++++|+++||||||
T Consensus 137 ~~~p~~~~~~~~~~~~----a-~p~g~v~~v~g~~~~~~~l~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~ 211 (433)
T cd07134 137 ELTPHTSAVIAKIIRE----A-FDEDEVAVFEGDAEVAQALLELPFDHIFFTGSPAVGKIVMAAAAKHLASVTLELGGKS 211 (433)
T ss_pred ccCHHHHHHHHHHHHH----h-CCcCEEEEEeCChhHHHHHHhCCCCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCC
Confidence 9999999988888764 4 899999999998788899998 899999999999999999999999999999999999
Q ss_pred eEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCC-CCCCCccccccCHHHHHH
Q 012790 165 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP-LAGKYDMGALCLLEHSEK 243 (456)
Q Consensus 165 p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~~gpli~~~~~~~ 243 (456)
|+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++..|+| .+.++++||++++.++++
T Consensus 212 ~~iV~~dAD~~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~~~~~ 291 (433)
T cd07134 212 PTIVDETADLKKAAKKIAWGKFLNAGQTCIAPDYVFVHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDR 291 (433)
T ss_pred cEEECCCCCHHHHHHHHHHHhhcCcCCcccCCcEEEECHHHHHHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999987886 788899999999999999
Q ss_pred HHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCce
Q 012790 244 LQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLG 323 (456)
Q Consensus 244 v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~ 323 (456)
+.++|++++++|+++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||+
T Consensus 292 i~~~i~~a~~~ga~~~~gg~~-----~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gl~ 366 (433)
T cd07134 292 LKGLLDDAVAKGAKVEFGGQF-----DAAQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLA 366 (433)
T ss_pred HHHHHHHHHhCCCEEEeCCCc-----CCCCCEEeeEEEeCCCCccHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCcE
Confidence 999999999999999999973 345899999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEE
Q 012790 324 CAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389 (456)
Q Consensus 324 ~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~ 389 (456)
+||||+|.+.++++++++++|.|+||+.......+.+||||+|+||+|+++|++|+++||+.|+|.
T Consensus 367 a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~ 432 (433)
T cd07134 367 LYVFSKDKANVNKVLARTSSGGVVVNDVVLHFLNPNLPFGGVNNSGIGSYHGVYGFKAFSHERAVL 432 (433)
T ss_pred EEEECCCHHHHHHHHHhCCcceEEECCcccccCCCCCCCCCcCcccCCCcCcHHHHHHhcccceee
Confidence 999999999999999999999999999765554566899999999999999999999999999975
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. |
| >cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-81 Score=651.67 Aligned_cols=369 Identities=29% Similarity=0.510 Sum_probs=339.6
Q ss_pred HHHHHHHHHHHHHHHhhhhhhCCcccCCCc-ccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecC
Q 012790 7 GEIMTTCEKITWLLSEGEKWLKPEYRSSGR-SMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 85 (456)
Q Consensus 7 ~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps 85 (456)
.|+..+++.++|+++.++++.+.+...... .......++.++|+|||++|+|||||+.++++++++||++||+||+|||
T Consensus 65 ~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps 144 (436)
T cd07135 65 TEVSGVKNDILHMLKNLKKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPS 144 (436)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCcccCCcccccCCCceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECC
Confidence 599999999999999998887554332211 1123457899999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh-ccCEEEecCCHHHHHHHHHHhhccCCcccccCCCcc
Q 012790 86 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD 164 (456)
Q Consensus 86 ~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~-~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgGk~ 164 (456)
+.+|+++..+.+++.+ |+|+|++++|+|+++....|+. .+|.|.||||+.+|+.|++.++++++|+++|+||||
T Consensus 145 ~~~p~~~~~l~~l~~~-----~lP~g~v~vv~g~~~~~~~l~~~~vd~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~ 219 (436)
T cd07135 145 ELTPHTAALLAELVPK-----YLDPDAFQVVQGGVPETTALLEQKFDKIFYTGSGRVGRIIAEAAAKHLTPVTLELGGKS 219 (436)
T ss_pred ccChHHHHHHHHHHHH-----hCCcCEEEEEcCCchhHHHHHhCCCCEEEEECCcHHHHHHHHHHHhcCCCeEEEccCCC
Confidence 9999999988888763 5999999999997655566887 899999999999999999999999999999999999
Q ss_pred eEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHHHH
Q 012790 165 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKL 244 (456)
Q Consensus 165 p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v 244 (456)
|+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+| ++++++||++++++++++
T Consensus 220 ~~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~i 298 (436)
T cd07135 220 PVIVTKNADLELAAKRILWGKFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPGGA-NASPDYTRIVNPRHFNRL 298 (436)
T ss_pred cEEECCCCCHHHHHHHHHHHHhccCCceecCCCEEeccHHHHHHHHHHHHHHHHHhcCCCC-CCCCCcCCCCCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999 899999999999999999
Q ss_pred HHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCcee
Q 012790 245 QNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGC 324 (456)
Q Consensus 245 ~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~ 324 (456)
.++++++ |+++++||.. ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++
T Consensus 299 ~~~v~~a---g~~v~~gg~~-----~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~an~~~~gL~~ 370 (436)
T cd07135 299 KSLLDTT---KGKVVIGGEM-----DEATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLAL 370 (436)
T ss_pred HHHHHhc---CCeEEECCCc-----CCCCCEEccEEEecCCCccHHHhccccCCceEEEecCCHHHHHHHHhCCCCCceE
Confidence 9999987 8899999973 2368999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEE
Q 012790 325 AVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389 (456)
Q Consensus 325 ~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~ 389 (456)
||||+|.+.++++++++++|.|+||+...+...+.+||||+|+||+|+++|++|+++||+.|+|.
T Consensus 371 ~v~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~ 435 (436)
T cd07135 371 YIFTDDKSEIDHILTRTRSGGVVINDTLIHVGVDNAPFGGVGDSGYGAYHGKYGFDTFTHERTVV 435 (436)
T ss_pred EEEcCCHHHHHHHHhcCCcCeEEECCccccccCCCCCcCCcCcccCCccccHhHHHHhccccccc
Confidence 99999999999999999999999998765544566999999999999999999999999999874
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. |
| >cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-80 Score=647.11 Aligned_cols=370 Identities=33% Similarity=0.522 Sum_probs=339.7
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++++++.+++... +..+.. ..+...+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 57 ~~~ei~~~~~~l~~~~~~~~~~~~-~~~~~~--~~g~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kp 133 (431)
T cd07104 57 AAFEVGAAIAILREAAGLPRRPEG-EILPSD--VPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKP 133 (431)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC-ccccCC--CCCceeEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeC
Confidence 456999999999999988765422 222211 12345689999999999999999999999999999999999999999
Q ss_pred CCCChhH-HHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccC
Q 012790 85 SENASWS-GCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 160 (456)
Q Consensus 85 s~~~p~~-~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lEl 160 (456)
|+.+|.+ +..+.+ +|.++|+|+|++++++|++ +.+..|++ ++|.|+||||+.+|+.|+++++++++|+++|+
T Consensus 134 s~~~p~~~~~~l~~----~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lel 209 (431)
T cd07104 134 DSRTPVTGGLLIAE----IFEEAGLPKGVLNVVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGRHLKKVALEL 209 (431)
T ss_pred CCCChHHHHHHHHH----HHHHcCCCcccEEEeeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEEc
Confidence 9999987 344444 4568999999999999976 57888887 89999999999999999999999999999999
Q ss_pred CCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHH
Q 012790 161 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 240 (456)
Q Consensus 161 gGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~ 240 (456)
|||||+||++|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+
T Consensus 210 gG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~ 289 (431)
T cd07104 210 GGNNPLIVLDDADLDLAVSAAAFGAFLHQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQ 289 (431)
T ss_pred CCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCccCcccCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCC
Q 012790 241 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRY 320 (456)
Q Consensus 241 ~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~ 320 (456)
++++.+++++++++|+++++||. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|++++
T Consensus 290 ~~~i~~~i~~a~~~G~~~~~gg~-------~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~ 362 (431)
T cd07104 290 VDRVHAIVEDAVAAGARLLTGGT-------YEGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEY 362 (431)
T ss_pred HHHHHHHHHHHHHCCCEEEeCCC-------CCCceECCEEeecCCCCChhhhCcCcCCeEEEEEECCHHHHHHHHhCCCC
Confidence 99999999999999999999986 25889999999999999999999999999999999999999999999999
Q ss_pred CceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEE
Q 012790 321 GLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389 (456)
Q Consensus 321 gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~ 389 (456)
||++||||+|.+.++++++++++|.|+||++..+. .+.+||||+|.||+|+++|++|+++||+.|++.
T Consensus 363 gl~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~-~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~~~ 430 (431)
T cd07104 363 GLSAAVFTRDLERAMAFAERLETGMVHINDQTVND-EPHVPFGGVKASGGGRFGGPASLEEFTEWQWIT 430 (431)
T ss_pred CceEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCC-CCCCCCCCcccccCCccchHHHHHHhhceeEEe
Confidence 99999999999999999999999999999987654 456999999999999999999999999999975
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. |
| >cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-80 Score=647.00 Aligned_cols=369 Identities=34% Similarity=0.500 Sum_probs=337.4
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++.++++.. ...+.. ..+...+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 57 ~~~ei~~~~~~l~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKp 133 (432)
T cd07105 57 AGFNVDLAAGMLREAASLITQIIG-GSIPSD--KPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKA 133 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC-eecccC--CCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEEC
Confidence 346899999999999998887622 222221 12345688999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh----HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccc
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA----ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTL 158 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~----~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~l 158 (456)
|+.+|+++..+.+++ .++|+|+|++|+++|+. +.+..|++ ++|.|+||||+.+|+.|+++++++++|+++
T Consensus 134 s~~~p~~~~~l~~~~----~~aGlP~gv~~~v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~l 209 (432)
T cd07105 134 SELSPRTHWLIGRVF----HEAGLPKGVLNVVTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAKHLKPVLL 209 (432)
T ss_pred CccChHHHHHHHHHH----HHcCcCCCcEEEEeCCCCchHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEE
Confidence 999999998887775 47899999999999853 46788887 799999999999999999999999999999
Q ss_pred cCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCH
Q 012790 159 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLL 238 (456)
Q Consensus 159 ElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~ 238 (456)
|||||||+||++|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++| ++++||++++
T Consensus 210 ElgGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g-----~~~~gp~i~~ 284 (432)
T cd07105 210 ELGGKAPAIVLEDADLDAAANAALFGAFLNSGQICMSTERIIVHESIADEFVEKLKAAAEKLFAG-----PVVLGSLVSA 284 (432)
T ss_pred eCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCcCCceEEEcHHHHHHHHHHHHHHHHhhcCC-----CCcccccCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999988 5689999999
Q ss_pred HHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcC
Q 012790 239 EHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDS 318 (456)
Q Consensus 239 ~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~ 318 (456)
.++++++++|++++++|+++++||.... ...++|++|||+++++++|.+++||+||||++|++|+|.||||+++|++
T Consensus 285 ~~~~~~~~~i~~a~~~ga~~~~gg~~~~---~~~~~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~ 361 (432)
T cd07105 285 AAADRVKELVDDALSKGAKLVVGGLADE---SPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDS 361 (432)
T ss_pred HHHHHHHHHHHHHHHCCCEEEeCCCcCC---CCCCeEEeeEEEecCCCCCHHHhCCCcCCeEEEEeeCCHHHHHHHHhCC
Confidence 9999999999999999999999997421 1358999999999999999999999999999999999999999999999
Q ss_pred CCCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEE
Q 012790 319 RYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389 (456)
Q Consensus 319 ~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~ 389 (456)
+|||++||||+|.+.++++++++++|.|+||++..+. .+.+||||+|+||+|+++|++|+++||+.|+|.
T Consensus 362 ~~gL~~~v~t~d~~~~~~~~~~l~~g~v~vN~~~~~~-~~~~PfgG~~~SG~G~~~g~~~l~~~~~~k~v~ 431 (432)
T cd07105 362 EYGLSAAVFTRDLARALAVAKRIESGAVHINGMTVHD-EPTLPHGGVKSSGYGRFNGKWGIDEFTETKWIT 431 (432)
T ss_pred CCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCC-CCCCCCCCcccccccccChHHHHHHhhceEEEe
Confidence 9999999999999999999999999999999976553 456999999999999999999999999999985
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. |
| >cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-80 Score=656.24 Aligned_cols=380 Identities=21% Similarity=0.264 Sum_probs=334.4
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccC-----CCccccc-ccceEEEec-ceEEEEEcCCccchHhhHHHHHHHHhcC
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRS-----SGRSMIH-KKAKVEFHP-LGVVGAIVSWNYPFHNIFNPMLAAVFSG 77 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~-----~~~~~~~-~~~~~~~~P-~GVv~vi~p~N~P~~~~~~~~~~ALaaG 77 (456)
+..|+..+++.++|+++.+++|..+.... .+..... ...+++++| +|||++|+|||||++++++++++||++|
T Consensus 93 a~~Ev~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P~~~~~~~~~~ALaaG 172 (513)
T cd07128 93 SWIDIDGGIGTLFAYASLGRRELPNAHFLVEGDVEPLSKDGTFVGQHILTPRRGVAVHINAFNFPVWGMLEKFAPALLAG 172 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccccccccCCcccccCCCccccceEEEEecccEEEEECCcccHHHHHHHHHHHHHHcC
Confidence 45799999999999999998886432110 0000001 135788999 5999999999999999999999999999
Q ss_pred CeEEEecCCCChhHHHHHHHHHHHHHHHcC-CCCCcEEEEeCCh-HhHHHHHhccCEEEecCCHHHHHHHHHHh--hccC
Q 012790 78 NGIVIKVSENASWSGCFYFRIIQAALAAVG-APENLVDVITGFA-ETGEALVSSVDKIIFVGSPGVGRMIMRNA--SKTL 153 (456)
Q Consensus 78 N~VvlKps~~~p~~~~~l~~l~~~~l~~aG-lp~g~v~vv~g~~-~~~~~L~~~vd~i~fTGS~~~g~~v~~~a--a~~~ 153 (456)
|+||+|||+.+|+++.++++++. ++| +|+|++|+|+|++ +.+..| ..+|+|+||||+++|++|++.+ ++++
T Consensus 173 N~VVlKPs~~tp~~~~~l~~~~~----eaG~lP~gv~~~v~g~~~~~~~~l-~~~d~v~fTGS~~~G~~i~~~a~~a~~~ 247 (513)
T cd07128 173 VPVIVKPATATAYLTEAVVKDIV----ESGLLPEGALQLICGSVGDLLDHL-GEQDVVAFTGSAATAAKLRAHPNIVARS 247 (513)
T ss_pred CEEEEECCCCCCHHHHHHHHHHH----HhCCCCCCcEEEecCChHHHhccc-CCCCEEEEECCHHHHHHHHHHhhhhccC
Confidence 99999999999999998888764 789 9999999999964 333332 2789999999999999999985 4889
Q ss_pred CcccccCCCcceEEEcCCCC-----HHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCC
Q 012790 154 TPVTLELGGKDAFIVCDDVD-----VPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAG 228 (456)
Q Consensus 154 ~pv~lElgGk~p~iV~~daD-----l~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~ 228 (456)
+|+++|||||||+||++||| ++.+++.+++++|.|+||+|++++|+|||+++||+|+++|+++++++++|+|.++
T Consensus 248 ~~~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~ 327 (513)
T cd07128 248 IRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAFVPEARVDAVIEALKARLAKVVVGDPRLE 327 (513)
T ss_pred ceEEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHHHhcCCcccCCceEEEehHHHHHHHHHHHHHHHhcccCCCccC
Confidence 99999999999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCC---CCCCCCCccccceeeecCCCC--CccchhccccCceeEe
Q 012790 229 KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGH---LSEGAVDQYFPPTVIVNVNHT--MKLMQEEAFGPIMPIM 303 (456)
Q Consensus 229 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~---~~~~~~g~~~~Ptvl~~v~~~--~~i~~eE~FGPvl~v~ 303 (456)
++++||++++.++++++++|++++++ |++++||.... .+....|+|++|||+.+++++ |.+++||+||||++|+
T Consensus 328 ~~~lGpli~~~~~~~i~~~i~~a~~~-A~vl~GG~~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i~~eE~FGPVl~V~ 406 (513)
T cd07128 328 GVRMGPLVSREQREDVRAAVATLLAE-AEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDAATAVHDVEAFGPVATLM 406 (513)
T ss_pred CCCcCCCCCHHHHHHHHHHHHHHHhC-CEEEECCCccccccCCCCCCCEEECCEEEeccCCcccchHHhCCCcCCeEEEE
Confidence 99999999999999999999999987 99999997421 111235899999999998874 8999999999999999
Q ss_pred eeCCHHHHHHHHhcCCCCceeEEecCCHHHHHHHHHhcc--cCCeeecCCcc-------cccCcCCCccCCCCCCCCCcc
Q 012790 304 KFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ--CGVAAINDFAS-------NYMCQSLPFGGVKDSGFGRFA 374 (456)
Q Consensus 304 ~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~--~G~v~iN~~~~-------~~~~~~~PfGG~~~SG~G~~~ 374 (456)
+|+|+||||+++|+++|||++||||+|.+.+++++++++ +|.|+||+..+ ....+.+||||+|.||+|+++
T Consensus 407 ~~~~~deai~~aN~~~~gL~asvft~d~~~~~~~~~~l~~~~G~v~IN~~~~~~~~~~~~~~~~~~pfGG~k~SG~G~~~ 486 (513)
T cd07128 407 PYDSLAEAIELAARGRGSLVASVVTNDPAFARELVLGAAPYHGRLLVLNRDSAKESTGHGSPLPQLVHGGPGRAGGGEEL 486 (513)
T ss_pred eeCCHHHHHHHHhcCCCCeeEEEEeCCHHHHHHHHHHHHhhCCEEEEcCCccccccccccCCCCCCCCCCcccCCCCccc
Confidence 999999999999999999999999999999999999997 99999998642 122456899999999999995
Q ss_pred -hHHHHhccceeeEEEE
Q 012790 375 -GVEGLRACCLVKSVVE 390 (456)
Q Consensus 375 -g~~gl~~ft~~k~v~~ 390 (456)
|.+|+++|++.|+|.-
T Consensus 487 gg~~~l~~~~~~k~v~~ 503 (513)
T cd07128 487 GGLRGVKHYMQRTAVQG 503 (513)
T ss_pred ccHHHHHHhheeeeeeC
Confidence 7999999999999853
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. |
| >cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-80 Score=650.43 Aligned_cols=376 Identities=34% Similarity=0.556 Sum_probs=342.1
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|++...++... ...+.. ..+...+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 78 ~~~ev~~~~~~~~~~a~~~~~~~~-~~~~~~--~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~Vilkp 154 (457)
T cd07114 78 TRAQVRYLAEWYRYYAGLADKIEG-AVIPVD--KGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKP 154 (457)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC-cccccC--CCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHhcCCeEEeEC
Confidence 446888999999999877654322 111111 12345688999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg 161 (456)
|+.+|+++..+++++. ++|+|+|++++|+|++ +.+..|+. ++|.|+||||+.+|++|++.++++++|+++|+|
T Consensus 155 s~~~p~~~~~l~~~l~----~aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelg 230 (457)
T cd07114 155 SEHTPASTLELAKLAE----EAGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAENLAPVTLELG 230 (457)
T ss_pred CccchHHHHHHHHHHH----HcCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEecC
Confidence 9999999998888764 7899999999999965 57888887 899999999999999999999999999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
||||+||++|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++++++
T Consensus 231 G~~~~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~ 310 (457)
T cd07114 231 GKSPNIVFDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDPETQMGPLATERQL 310 (457)
T ss_pred CCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCC
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 321 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~g 321 (456)
++++++|++++++|+++++||.....+....|+|++|||++++++++++++||+||||++|++|+|.||||+++|+++||
T Consensus 311 ~~~~~~i~~a~~~ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~g 390 (457)
T cd07114 311 EKVERYVARAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYG 390 (457)
T ss_pred HHHHHHHHHHHHCCCEEEeCCCccccccCCCCCEECCEEEeCCCCCChhhhcCCcCceEEEeccCCHHHHHHHhhCCCcC
Confidence 99999999999999999999974321112358999999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEE
Q 012790 322 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389 (456)
Q Consensus 322 L~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~ 389 (456)
|++||||+|.+.++++++++++|.|+||+.... .+.+||||+|+||+|+++|.+|+++||+.|++.
T Consensus 391 L~~~ift~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~~ 456 (457)
T cd07114 391 LAAGIWTRDLARAHRVARAIEAGTVWVNTYRAL--SPSSPFGGFKDSGIGRENGIEAIREYTQTKSVW 456 (457)
T ss_pred ceeEEECCCHHHHHHHHHhcCcceEEECCCCCC--CCCCCCCCCccCcCCccchHHHHHHHhceeEEe
Confidence 999999999999999999999999999986543 356899999999999999999999999999985
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. |
| >cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-80 Score=649.25 Aligned_cols=369 Identities=28% Similarity=0.501 Sum_probs=339.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecC
Q 012790 6 LGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 85 (456)
Q Consensus 6 ~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps 85 (456)
..|+..+++.++|++..++...+.. .+. ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||
T Consensus 78 ~~ev~~~i~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~VIlKps 154 (450)
T cd07092 78 DDELPGAVDNFRFFAGAARTLEGPA-AGE--YLPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPS 154 (450)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCcc-cCc--cCCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECC
Confidence 4689999999999998776543221 111 1123356889999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCC
Q 012790 86 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162 (456)
Q Consensus 86 ~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgG 162 (456)
+.+|.++.++.+++. + |+|+|++++|+|++ +.++.|++ ++|.|+||||+.+|+.|++.++++++|+++||||
T Consensus 155 ~~~~~~~~~l~~~~~----~-glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~~~lelgG 229 (450)
T cd07092 155 ETTPLTTLLLAELAA----E-VLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAADTLKRVHLELGG 229 (450)
T ss_pred ccchHHHHHHHHHHH----h-cCCcccEEEeecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCcEEEECCC
Confidence 999999999888875 4 89999999999876 47888887 8999999999999999999999999999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHH
Q 012790 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 242 (456)
Q Consensus 163 k~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~ 242 (456)
|||+||++|||++.|++.|++|+|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++++++
T Consensus 230 ~~p~iV~~dAdl~~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~ 309 (450)
T cd07092 230 KAPVIVFDDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRE 309 (450)
T ss_pred CCeeEECCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEEeHHHHHHHHHHHHHHHhhCCcCCCCCCCCccCcccCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCc
Q 012790 243 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 322 (456)
Q Consensus 243 ~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL 322 (456)
+++++|+++. +|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||
T Consensus 310 ~i~~~i~~a~-~ga~~~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL 384 (450)
T cd07092 310 RVAGFVERAP-AHARVLTGGRRA----EGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGL 384 (450)
T ss_pred HHHHHHHHHH-cCCEEEeCCCCC----CCCccEEeeEEEEcCCCCChHHhCCCcCceEEEEEECCHHHHHHHHhCCCCCc
Confidence 9999999998 999999999742 23689999999999999999999999999999999999999999999999999
Q ss_pred eeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEE
Q 012790 323 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389 (456)
Q Consensus 323 ~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~ 389 (456)
++||||+|.+.++++++++++|.|+||++... .+.+||||+|+||+|++||++++++||+.|+|.
T Consensus 385 ~~~vft~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~PfgG~~~SG~G~~~g~~~~~~~~~~k~~~ 449 (450)
T cd07092 385 ASSVWTRDVGRAMRLSARLDFGTVWVNTHIPL--AAEMPHGGFKQSGYGKDLSIYALEDYTRIKHVM 449 (450)
T ss_pred eEEEECCCHHHHHHHHHhcCccEEEECCCCCC--CCCCCcCCcccCcCCCCChHHHHHHHheeeEEe
Confidence 99999999999999999999999999987653 456999999999999999999999999999985
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. |
| >TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-80 Score=651.07 Aligned_cols=378 Identities=26% Similarity=0.351 Sum_probs=342.0
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|++...+....+ ..+.. ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 95 a~~ev~~~i~~~~~~~~~~~~~~g~-~~~~~--~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKp 171 (477)
T TIGR01722 95 ALGDVARGLEVVEHACGVNSLLKGE-TSTQV--ATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPIAIACGNTFVLKP 171 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCc-ccccC--CCCceEEEEEcccceEEEEccCChHHHHHHHHHHHHHhcCCEEEeeC
Confidence 4579999999999998877654322 21111 11234578999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgG 162 (456)
|+.+|.++..+.+++ .++|+|+|++|+|+|+.+.++.|++ ++|.|+||||+.+|+.|++.+++++||+++||||
T Consensus 172 s~~~p~~~~~l~~~l----~~aglP~g~~~~v~g~~~~~~~L~~~~~v~~V~ftGS~~~g~~v~~~a~~~~~~v~lElGG 247 (477)
T TIGR01722 172 SEKVPSAAVKLAELF----SEAGAPDGVLNVVHGDKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSAHGKRVQALGGA 247 (477)
T ss_pred cccChHHHHHHHHHH----HHhCcCCCeEEEEeCCHHHHHHHHcCCCcCEEEEECCHHHHHHHHHHHHhcCCeEEEECCC
Confidence 999999998877665 5799999999999997777888887 9999999999999999999999999999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHH
Q 012790 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 242 (456)
Q Consensus 163 k~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~ 242 (456)
|||+||++|||++.|++.+++++|.|+||.|++++|||||+++ |+|+++|+++++++++|+|.++++++||++++++++
T Consensus 248 ~n~~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~rl~v~~~~-~~f~~~l~~~~~~~~~G~~~~~~~~~Gp~i~~~~~~ 326 (477)
T TIGR01722 248 KNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAA-DEWVPEIRERAEKIRIGPGDDPGAEMGPLITPQAKD 326 (477)
T ss_pred CCceEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeCcH-HHHHHHHHHHHhcCCCCCCCCCCCCcCCCcCHHHHH
Confidence 9999999999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCc
Q 012790 243 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 322 (456)
Q Consensus 243 ~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL 322 (456)
+++++|++++++|+++++||..........|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||
T Consensus 327 ~~~~~i~~a~~~Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~V~~~~~~~eai~~~n~~~~gl 406 (477)
T TIGR01722 327 RVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEAIALINASPYGN 406 (477)
T ss_pred HHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCChhhhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCC
Confidence 99999999999999999999742211123589999999999999999999999999999999999999999999999999
Q ss_pred eeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCC--CcchHHHHhccceeeEEEEc
Q 012790 323 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG--RFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 323 ~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G--~~~g~~gl~~ft~~k~v~~~ 391 (456)
++||||+|.+.++++++++++|.|+||+.... ..+.+||||+|+||+| +++|++|+++||+.|++++.
T Consensus 407 ~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~~pfgG~k~SG~G~~~~~g~~~l~~~~~~k~i~~~ 476 (477)
T TIGR01722 407 GTAIFTRDGAAARRFQHEIEVGQVGVNVPIPV-PLPYFSFTGWKDSFFGDHHIYGKQGTHFYTRGKTVTTR 476 (477)
T ss_pred eEEEEcCCHHHHHHHHHhCCeeeEEECCCCCC-CCCCCCCCccccccCCCCccChHHHHHHhcCeeEEEEe
Confidence 99999999999999999999999999985433 3356899999999999 57899999999999998764
|
In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus. |
| >PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-81 Score=656.97 Aligned_cols=374 Identities=36% Similarity=0.598 Sum_probs=342.4
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++.++++ ..+..+.+ .+...+++++|+|||++|+|||||+.+.+.++++||++||+||+||
T Consensus 86 a~~ev~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VVlkp 161 (462)
T PF00171_consen 86 ARGEVDRAIDFLRYYADAARKL-AGEVLPSD---PGSRNYTRREPLGVVLIITPWNFPLYLAVWKIAPALAAGNTVVLKP 161 (462)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-TEEEEEES---TTEEEEEEEEE-SEEEEEE-SSSCTHHHHHHHHHHHHTT-EEEEEE
T ss_pred ccchhhhhhhhhhhhhhcccce-ehhhcccc---cccccccccccccceeecccccccccccccchhhhhcccccceeee
Confidence 4569999999999999999884 33433221 3567899999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg 161 (456)
|+.+|.++.++++++. +||+|+|++|+++|++ +.+..|+. ++|.|+||||+++|++|++.++++++|+++|+|
T Consensus 162 s~~~~~~~~~l~~~~~----~AglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~v~lelg 237 (462)
T PF00171_consen 162 SEQAPLTALLLAELLE----EAGLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGSTATGRAIAKAAAKNLKPVVLELG 237 (462)
T ss_dssp BTTSHHHHHHHHHHHH----HHTSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEHHHHHHHHHHHHTTTSEEEEEEC
T ss_pred ccccccccccchhhcc----ccccccccccccccccccccceeeeccccceeeecchhhhhhhhhhhccccccccccccc
Confidence 9999999988888765 5799999999999954 78899987 999999999999999999999999999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++..++
T Consensus 238 G~~p~iV~~daDld~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~~gpl~~~~~~ 317 (462)
T PF00171_consen 238 GKNPVIVDPDADLDKAAEAIVRGAFFNSGQSCTAPSRVLVHESIYDEFVEALKERVAKLRVGDPLDESTDVGPLISKAQR 317 (462)
T ss_dssp EEEEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHHTSEBSSTTSTTCSBCHCSSHHHH
T ss_pred ccceeeEecccccccccccccchhcccccccccccccccccccccchhhhhhhhccccccccCCccccccccccccchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCC
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 321 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~g 321 (456)
+++.+++++++++||++++||. ........|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 318 ~~~~~~i~~a~~~ga~v~~gg~-~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~g 396 (462)
T PF00171_consen 318 ERVKALIEDAVAEGAKVLCGGE-PQEADPENGFFIPPTVLEDVPPDMPIMQEEIFGPVLPVVPYDDLDEAIALANDSEYG 396 (462)
T ss_dssp HHHHHHHHHHHHTTSEEEEETS-SSSBCSSSSTEEEEEEEESEHTTSHHHHSC-SSSEEEEEEESSHHHHHHHHHHSSEE
T ss_pred hhcccccccccccccccccccc-cccccccccccccccccccccccccccccccccccceecccccchhhhhcccccCCC
Confidence 9999999999999999999993 111235678999999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEE
Q 012790 322 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 388 (456)
Q Consensus 322 L~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v 388 (456)
|++||||+|.+.++++++++++|.|+||++..+.... +||||+|.||+|+++|.+|+++||+.|+|
T Consensus 397 l~a~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~-~pfgG~~~SG~G~~~g~~~l~~~~~~k~V 462 (462)
T PF00171_consen 397 LTASVFSRDESRAERLARRLEAGRVWINDPPTGDPDG-LPFGGFKQSGIGREGGPEGLDEFTQIKTV 462 (462)
T ss_dssp SEEEEECSBHHHHHHHHHHSTSSEEEESSSSTGGTTS-SEBE-SGGGEESEBSHHHHHHGTEEEEEE
T ss_pred ceeEEecccccccccccccccccceeecCCccccccc-CCCCCcccccCCcchHHHHHHHhCCccCC
Confidence 9999999999999999999999999999997766554 79999999999999999999999999987
|
2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A .... |
| >cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-80 Score=646.44 Aligned_cols=370 Identities=28% Similarity=0.475 Sum_probs=338.2
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcc--cccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEE
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRS--MIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVI 82 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~Vvl 82 (456)
+..|+..+++.++|+++.+.++.... ...... ..+...+++++|+|||++|+|||||+.++++++++||++||+||+
T Consensus 75 a~~ev~~~~~~l~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~Vil 153 (451)
T cd07146 75 TRYEVGRAADVLRFAAAEALRDDGES-FSCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVL 153 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcc-cccccccCCCCceEEEEEeccceEEEEccCChHHHHHHHHHHHHHHcCCEEEE
Confidence 45799999999999999887764321 111110 123456889999999999999999999999999999999999999
Q ss_pred ecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCccccc
Q 012790 83 KVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLE 159 (456)
Q Consensus 83 Kps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lE 159 (456)
|||+.+|+++..+.+++ .++|+|+|++++++|++ +.+..|++ ++|.|+||||+.+|+.|++.++ ++|+++|
T Consensus 154 Kps~~~p~~~~~l~~~l----~~aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~~~g~~i~~~a~--~~~~~lE 227 (451)
T cd07146 154 KPSEKTPLSAIYLADLL----YEAGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATAG--YKRQLLE 227 (451)
T ss_pred ECCCCchHHHHHHHHHH----HHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhc--CCceeee
Confidence 99999999998887775 57999999999999975 67888987 9999999999999999998876 6899999
Q ss_pred CCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHH
Q 012790 160 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLE 239 (456)
Q Consensus 160 lgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~ 239 (456)
||||||+||++|||++.|++.|++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.
T Consensus 228 lGG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~ 307 (451)
T cd07146 228 LGGNDPLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPMDPATDMGTVIDEE 307 (451)
T ss_pred cCCCceEEECCCCCHHHHHHHHHHHHHhhCCCCCCCCceEEEchHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCC
Q 012790 240 HSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSR 319 (456)
Q Consensus 240 ~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~ 319 (456)
+++++++++++++++|+++++||. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++
T Consensus 308 ~~~~v~~~v~~a~~~Ga~vl~gg~-------~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~ 380 (451)
T cd07146 308 AAIQIENRVEEAIAQGARVLLGNQ-------RQGALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTA 380 (451)
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCC-------cCCEEEcCEEeecCCCCCHHHhCCCCCCeEEEEEeCCHHHHHHHHhCCC
Confidence 999999999999999999999986 2488999999999999999999999999999999999999999999999
Q ss_pred CCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCC-CCcchHHHHhccceeeEEE
Q 012790 320 YGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGF-GRFAGVEGLRACCLVKSVV 389 (456)
Q Consensus 320 ~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~-G~~~g~~gl~~ft~~k~v~ 389 (456)
|||++||||+|.++++++++++++|.|+||+.... ..+.+||||+|+||+ |+++|++|+++||+.|++.
T Consensus 381 ~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~~PfGG~k~SG~~g~~~g~~~~~~f~~~k~~~ 450 (451)
T cd07146 381 YGLSSGVCTNDLDTIKRLVERLDVGTVNVNEVPGF-RSELSPFGGVKDSGLGGKEGVREAMKEMTNVKTYS 450 (451)
T ss_pred CCceEEEECCCHHHHHHHHHHCCcceEEECCCCCC-CCCCCCcCcccccCCCcccChHHHHHHHhceeEEe
Confidence 99999999999999999999999999999987533 334689999999995 8999999999999999874
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. |
| >cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-80 Score=656.70 Aligned_cols=374 Identities=23% Similarity=0.366 Sum_probs=342.3
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|++++++++++.+..+.+ .+...+++++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 126 a~~ev~~~i~~l~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~P~GVV~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKp 202 (518)
T cd07125 126 ADAEVREAIDFCRYYAAQARELFSDPELPGP---TGELNGLELHGRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKP 202 (518)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCccccCC---CCceeEEEEecccEEEEECCcchHHHHHHHHHHHHHHcCCEEEEeC
Confidence 3579999999999999999998765432221 2345689999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhcc---CCcccc
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKT---LTPVTL 158 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~---~~pv~l 158 (456)
|+.+|+++.++++++. ++|+|+|++++|+|++ +.+..|++ ++|.|+||||+++|++|++.++++ ++|+++
T Consensus 203 s~~tp~~~~~l~~ll~----eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~~~v~l 278 (518)
T cd07125 203 AEQTPLIAARAVELLH----EAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAERDGPILPLIA 278 (518)
T ss_pred CCcCcHHHHHHHHHHH----HcCCCCCcEEEEecCchhhHHHHhcCCCcCEEEEECCHHHHHHHHHHhhhccCCCceEEE
Confidence 9999999988888754 7899999999999976 47888887 899999999999999999998855 899999
Q ss_pred cCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCH
Q 012790 159 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLL 238 (456)
Q Consensus 159 ElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~ 238 (456)
|||||||+||++|||++.|++.|++++|.|+||.|+|++|||||++++|+|+++|+++++++++|+|.++++++||++++
T Consensus 279 ElgGk~p~iV~~dADl~~Aa~~iv~g~f~nsGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~ 358 (518)
T cd07125 279 ETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIAERFIEMLKGAMASLKVGDPWDLSTDVGPLIDK 358 (518)
T ss_pred EcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcchhHHHHHHHHHHHHhcCCccCCCCCCCCcCCCcCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeC--CHHHHHHHHh
Q 012790 239 EHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN--TDEEVVKLAN 316 (456)
Q Consensus 239 ~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~--~~~eai~~~n 316 (456)
+++++++++++++++ ++++++||... ...|+|++|||+.++ +|++++||+||||++|++|+ |+||||+++|
T Consensus 359 ~~~~~v~~~i~~a~~-~~~vl~gg~~~----~~~g~~~~Ptvl~~v--~~~i~~eE~FgPVl~v~~~~~~~~deAi~~~n 431 (518)
T cd07125 359 PAGKLLRAHTELMRG-EAWLIAPAPLD----DGNGYFVAPGIIEIV--GIFDLTTEVFGPILHVIRFKAEDLDEAIEDIN 431 (518)
T ss_pred HHHHHHHHHHHHHHh-CCEEEeCCCcC----CCCCeEEccEEEeec--CChHhhCcccCCeEEEEEeCCCCHHHHHHHHh
Confidence 999999999999987 56899988631 126899999999988 89999999999999999999 9999999999
Q ss_pred cCCCCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCC-cchHHHHhccceeeEEEEcc
Q 012790 317 DSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGR-FAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 317 ~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~-~~g~~gl~~ft~~k~v~~~~ 392 (456)
+++|||++||||+|.+.++++++++++|.|+||+...+...+.+||||+|+||+|+ .+|++++++||+.|++..+.
T Consensus 432 ~~~~gLta~Vft~d~~~~~~~~~~l~~G~V~IN~~~~~~~~~~~PfGG~~~SG~G~~~gg~~~~~~ft~~k~i~~~~ 508 (518)
T cd07125 432 ATGYGLTLGIHSRDEREIEYWRERVEAGNLYINRNITGAIVGRQPFGGWGLSGTGPKAGGPNYLLRFGNEKTVSLNT 508 (518)
T ss_pred CCCCCceEEEEeCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccccHHHHHHhcceEEEEEEc
Confidence 99999999999999999999999999999999998665444568999999999995 57799999999999998754
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. |
| >cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-80 Score=651.42 Aligned_cols=357 Identities=31% Similarity=0.514 Sum_probs=330.7
Q ss_pred HHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecCC
Q 012790 7 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 86 (456)
Q Consensus 7 ~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~ 86 (456)
.|+..+++.++++++..+... ..+..++|+|||++|+|||||+.+.++++++||++||+||+|||+
T Consensus 119 ~ev~~~~~~~~~~~~~~~~~~--------------~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKps~ 184 (480)
T cd07111 119 CDIPLVARHFYHHAGWAQLLD--------------TELAGWKPVGVVGQIVPWNFPLLMLAWKICPALAMGNTVVLKPAE 184 (480)
T ss_pred HHHHHHHHHHHHHHHHHHHhc--------------CCcccceecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 477777888877765544311 123568999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCCcc
Q 012790 87 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD 164 (456)
Q Consensus 87 ~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgGk~ 164 (456)
.+|.++..+++++ .++|+|+|++++|+|+.+.+..|++ ++|.|+||||+.+|+.|++.++++++|+++|+||||
T Consensus 185 ~tp~~~~~l~~~~----~~aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v~ftGs~~~g~~v~~~aa~~~~~~~lElGGk~ 260 (480)
T cd07111 185 YTPLTALLFAEIC----AEAGLPPGVLNIVTGNGSFGSALANHPGVDKVAFTGSTEVGRALRRATAGTGKKLSLELGGKS 260 (480)
T ss_pred CChHHHHHHHHHH----HhcCCCcccEEEEeCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhccCCcEEEEcCCCc
Confidence 9999999888775 5799999999999998778888887 799999999999999999999999999999999999
Q ss_pred eEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHHHH
Q 012790 165 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKL 244 (456)
Q Consensus 165 p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v 244 (456)
|+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++
T Consensus 261 p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~v 340 (480)
T cd07111 261 PFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKLKERMSHLRVGDPLDKAIDMGAIVDPAQLKRI 340 (480)
T ss_pred eEEECCCCCHHHHHHHHHHHHHhcCCCcCcCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCccccccCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCcee
Q 012790 245 QNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGC 324 (456)
Q Consensus 245 ~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~ 324 (456)
.++|++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++
T Consensus 341 ~~~i~~a~~~ga~~~~gg~~~----~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~ 416 (480)
T cd07111 341 RELVEEGRAEGADVFQPGADL----PSKGPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAVALANNTPYGLAA 416 (480)
T ss_pred HHHHHHHHHCCCEEEeCCCcC----CCCCeEEeeEEEecCCCCChhhcCCCCCCeeEeecCCCHHHHHHHHhCCCCCceE
Confidence 999999999999999998632 2368999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeE
Q 012790 325 AVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKS 387 (456)
Q Consensus 325 ~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~ 387 (456)
||||+|.+.+.++++++++|.|+||+.... .+.+||||+|+||+|++||++|+++||+.|+
T Consensus 417 ~i~t~d~~~~~~~~~~l~aG~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~ 477 (480)
T cd07111 417 SVWSENLSLALEVALSLKAGVVWINGHNLF--DAAAGFGGYRESGFGREGGKEGLYEYLRPSW 477 (480)
T ss_pred EEEcCCHHHHHHHHHhCCEeeEEECCCCCC--CCCCCcCCcccccCCccchHHHHHHHhhccC
Confidence 999999999999999999999999987543 3458999999999999999999999999885
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. |
| >cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-80 Score=645.24 Aligned_cols=374 Identities=33% Similarity=0.521 Sum_probs=342.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecC
Q 012790 6 LGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 85 (456)
Q Consensus 6 ~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps 85 (456)
..|+..+++.++|+++.+.+. ..+..... .+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus 78 ~~ev~~~i~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlkps 153 (455)
T cd07093 78 TRDIPRAAANFRFFADYILQL-DGESYPQD---GGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPS 153 (455)
T ss_pred HHHHHHHHHHHHHHHHhHHHh-CCccccCC---CCceEEEEEEeeeEEEEECCCChHHHHHHHHHHHHHhcCCEEEeECC
Confidence 458999999999999987763 22221111 23456789999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCC
Q 012790 86 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162 (456)
Q Consensus 86 ~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgG 162 (456)
+.+|+++..+.+++. ++|+|+|++++++|++ +.+..|++ ++|.|+||||+.+|+.|+++++++++|+++|+||
T Consensus 154 ~~~p~~~~~l~~~l~----~aglP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG 229 (455)
T cd07093 154 EWTPLTAWLLAELAN----EAGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAPNLKPVSLELGG 229 (455)
T ss_pred CcCcHHHHHHHHHHH----hcCCCccceEEEecCchHHHHHHhcCCCccEEEEECCHHHHHHHHHHHhhcccceEeecCC
Confidence 999999988887764 7999999999999964 67888887 7999999999999999999999999999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHH
Q 012790 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 242 (456)
Q Consensus 163 k~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~ 242 (456)
|||+||++|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++
T Consensus 230 ~~~~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~ 309 (455)
T cd07093 230 KNPNIVFADADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDTEVGPLISKEHLE 309 (455)
T ss_pred CCceEECCCCCHHHHHHHHHHHHHhccCCCcCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCc
Q 012790 243 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 322 (456)
Q Consensus 243 ~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL 322 (456)
++.+++++++++|+++++||.....+....++|++|||++++++++++++||+||||++|++|+|.||||+++|++++||
T Consensus 310 ~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl 389 (455)
T cd07093 310 KVLGYVELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGL 389 (455)
T ss_pred HHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEecCCCCChHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCc
Confidence 99999999999999999999743211123588999999999999999999999999999999999999999999999999
Q ss_pred eeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEE
Q 012790 323 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389 (456)
Q Consensus 323 ~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~ 389 (456)
++||||+|.+.++++++++++|.|+||++.... +.+||||+|+||+|++||++|+++|++.|++.
T Consensus 390 s~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~--~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~~~ 454 (455)
T cd07093 390 AAYVWTRDLGRAHRVARRLEAGTVWVNCWLVRD--LRTPFGGVKASGIGREGGDYSLEFYTELKNVC 454 (455)
T ss_pred eEEEECCCHHHHHHHHHhCCcceEEECCCCCCC--CCCCcCCCccCcCCCCchHHHHHHHhceeEEe
Confidence 999999999999999999999999999986553 45899999999999999999999999999984
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. |
| >TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-80 Score=648.52 Aligned_cols=373 Identities=23% Similarity=0.400 Sum_probs=338.2
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++++.++..... .. ......+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 92 a~~ev~~~~~~~~~~~~~~~~~~g~~~--~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKP 167 (484)
T TIGR03240 92 TRTEVASMIGKVAISIKAYHERTGESE--NP--MPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKP 167 (484)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCccc--cC--CCCceeEEEEecccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEEC
Confidence 347999999999999988877643221 11 12345688999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhcc-CCcccccCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKT-LTPVTLELG 161 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~-~~pv~lElg 161 (456)
|+.+|+++..+++++. ++|+|+|++|+|+|+.+.++.|++ ++|+|+||||+++|+.|++.++++ .++++||||
T Consensus 168 s~~tp~t~~~l~~~~~----~aGlP~gvv~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~G~~i~~~aa~~~~~~~~lElG 243 (484)
T TIGR03240 168 SELTPWVAEETVKLWE----KAGLPAGVLNLVQGARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRPEKILALEMG 243 (484)
T ss_pred CccccHHHHHHHHHHH----HhCcCcccEEEEeCCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhcCCCcEEEECC
Confidence 9999999999888764 789999999999997788888887 899999999999999999988765 688999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhH-HHHHHHHHHHHhccccCCC-CCCCCccccccCHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIY-ALFVSQVAKIVKSVSAGPP-LAGKYDMGALCLLE 239 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~-d~f~~~l~~~~~~~~~g~~-~~~~~~~gpli~~~ 239 (456)
||||+||++|||++.|++.+++++|.|+||.|++++|||||++++ |+|+++|.+.++++++|+| .++++++||+++++
T Consensus 244 Gk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~~~gpli~~~ 323 (484)
T TIGR03240 244 GNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLARLVEVAERLTVGAWDAEPQPFMGAVISLQ 323 (484)
T ss_pred CCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeccccHHHHHHHHHHHHHhcccCCCCcCCCCcccccCCHH
Confidence 999999999999999999999999999999999999999999985 9999999999999999997 47788999999999
Q ss_pred HHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCC
Q 012790 240 HSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSR 319 (456)
Q Consensus 240 ~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~ 319 (456)
+++++.+++++++++|+++++||... +..++|++|||+ +++++|.+++||+||||++|++|+|+||||+++|+++
T Consensus 324 ~~~~v~~~i~~a~~~Ga~~~~gg~~~----~~~~~~i~PTvl-~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~~n~~~ 398 (484)
T TIGR03240 324 AAQRLLAAQAKLLALGGKSLLAMRQL----DPGAALLTPGII-DVTGVAELPDEEHFGPLLQVIRYDDFDEAIAIANNTR 398 (484)
T ss_pred HHHHHHHHHHHHHHCCCEEEeCCCcC----CCCCEEEcCEEE-ccCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCC
Confidence 99999999999999999999988632 235789999999 6999999999999999999999999999999999999
Q ss_pred CCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEcc
Q 012790 320 YGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 320 ~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~ 392 (456)
|||++||||+|.+.++++++++++|.|+||+...+. .+.+||||+|+||+|+++|.++++ |++.|++..+.
T Consensus 399 ~gL~~~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~-~~~~pfGG~~~SG~g~~~g~~~~~-~~~~~~~~~~~ 469 (484)
T TIGR03240 399 FGLSAGLLSDDRELYDRFLLEIRAGIVNWNKPLTGA-SSAAPFGGIGASGNHRPSAYYAAD-YCAYPVASLEA 469 (484)
T ss_pred CCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCC-CCCCCcCCcccccCCCCCchHHHh-heeeeEEEEec
Confidence 999999999999999999999999999999876553 355899999999999999977766 99999998874
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism. |
| >TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-80 Score=666.09 Aligned_cols=378 Identities=21% Similarity=0.270 Sum_probs=334.0
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhhCCccc---C--CCcccc-cccceEEEecc-eEEEEEcCCccchHhhHHHHHHHHhc
Q 012790 4 ASLGEIMTTCEKITWLLSEGEKWLKPEYR---S--SGRSMI-HKKAKVEFHPL-GVVGAIVSWNYPFHNIFNPMLAAVFS 76 (456)
Q Consensus 4 ~~~~Ei~~~~~~i~~~~~~~~~~~~~~~~---~--~~~~~~-~~~~~~~~~P~-GVv~vi~p~N~P~~~~~~~~~~ALaa 76 (456)
++..|+..+++.++|+++.+++++.+.+. . .+.... ....+++|+|+ |||++|+|||||+.++++++++||++
T Consensus 92 ~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~Gvv~~I~pwN~P~~~~~~~~~~ALaa 171 (663)
T TIGR02278 92 DNWVDIDGGIGTLFTYSSLGRRELPDANLIPEDEFEPLSKDGSFQGRHILTPKGGVAVQINAFNFPVWGLLEKFAPAFLA 171 (663)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhccccccccCCceeccCCCCccceEEEEEeCCceEEEEcCCchHHHHHHHHHHHHHHc
Confidence 34579999999999999998875422110 0 000001 12468999998 99999999999999999999999999
Q ss_pred CCeEEEecCCCChhHHHHHHHHHHHHHHHcC-CCCCcEEEEeCChHhHHHHH--hccCEEEecCCHHHHHHHHHHh--hc
Q 012790 77 GNGIVIKVSENASWSGCFYFRIIQAALAAVG-APENLVDVITGFAETGEALV--SSVDKIIFVGSPGVGRMIMRNA--SK 151 (456)
Q Consensus 77 GN~VvlKps~~~p~~~~~l~~l~~~~l~~aG-lp~g~v~vv~g~~~~~~~L~--~~vd~i~fTGS~~~g~~v~~~a--a~ 151 (456)
||+||+|||+.+|+++.++.+++. ++| +|+|++|+|+|+.. ..+. ..+|+|+||||+++|++|++.+ ++
T Consensus 172 GN~Vv~KPs~~tp~~~~~l~~~~~----~aG~lP~gv~~~v~g~~~--~~~~~~~~~~~V~FTGS~~~G~~i~~~aaaa~ 245 (663)
T TIGR02278 172 GVPTLAKPATPTAYVAEALVRTMV----ESGLLPEGSLQLICGSAG--DLLDHLDHRDVVAFTGSAATADRLRAHPNVLE 245 (663)
T ss_pred CCEEEEECCCcchHHHHHHHHHHH----HhCCCCCCcEEEEeCChH--HHHhcCCCCCEEEEECCHHHHHHHHHhHhHHh
Confidence 999999999999999998888764 789 99999999998632 2222 2789999999999999999874 48
Q ss_pred cCCcccccCCCcceEEEcCCCC-----HHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCC
Q 012790 152 TLTPVTLELGGKDAFIVCDDVD-----VPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 226 (456)
Q Consensus 152 ~~~pv~lElgGk~p~iV~~daD-----l~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~ 226 (456)
+++|+++|||||||+||++||| ++.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|.
T Consensus 246 ~~~~~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG~p~ 325 (663)
T TIGR02278 246 RGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLKALQARLAKVVLGDPR 325 (663)
T ss_pred cCceEEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHHhcCCCCccCCceEEEeHHHHHHHHHHHHHHHHhccCCCcc
Confidence 8999999999999999999999 99999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCC-ccchhccccCceeEeee
Q 012790 227 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTM-KLMQEEAFGPIMPIMKF 305 (456)
Q Consensus 227 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~-~i~~eE~FGPvl~v~~~ 305 (456)
++++++||++++.++++++++|++|+++|+++++||.. +..|+|++|||+.+++++| .+++||+||||++|++|
T Consensus 326 ~~~t~~Gpli~~~~~~~i~~~i~~a~~~Ga~vl~GG~~-----~~~g~~~~PTvl~~~~~~~~~i~~eE~FGPVl~V~~~ 400 (663)
T TIGR02278 326 EEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPG-----RLDGAFFPPTLLLAEDPWAGAVHATEAFGPVATFFPY 400 (663)
T ss_pred ccCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCc-----CCCCeeEccEEEeeCCcchhhHHhccccCCeEEEEee
Confidence 99999999999999999999999999999999999973 2358999999999999886 79999999999999999
Q ss_pred CCHHHHHHHHhcCCCCceeEEecCCHHHHHHHHHhc--ccCCeee-cCCc------ccccCcCCCccCCCCCCCCCc-ch
Q 012790 306 NTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI--QCGVAAI-NDFA------SNYMCQSLPFGGVKDSGFGRF-AG 375 (456)
Q Consensus 306 ~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l--~~G~v~i-N~~~------~~~~~~~~PfGG~~~SG~G~~-~g 375 (456)
+|.||||+++|+++|||++||||+|.+.++++++++ ++|.|+| |+.. .....+.+||||+|+||+|++ +|
T Consensus 401 ~~~~eai~~aN~~~~gL~a~vft~d~~~~~~~~~~l~~~~G~v~InN~~~~~~~~~~~~~~~~~pfGG~k~SG~G~~~g~ 480 (663)
T TIGR02278 401 GDRAEAARLAARGGGSLVATLATSDPEEARQFILGLAPYHGRLHILNRDDAAESTGHGSPLPRLLHGGPGRAGGGEELGG 480 (663)
T ss_pred CCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHHHHhhCCEEEECCCcccccccCCCCCCCCCCCCCCccCcCCCccch
Confidence 999999999999999999999999999999999999 7999999 6411 111234689999999999999 56
Q ss_pred HHHHhccceeeEEEEcc
Q 012790 376 VEGLRACCLVKSVVEDR 392 (456)
Q Consensus 376 ~~gl~~ft~~k~v~~~~ 392 (456)
.+++++|++.|+|..-+
T Consensus 481 ~~~l~~f~~~k~v~~~~ 497 (663)
T TIGR02278 481 LRSVKHYMQRTAIQGSP 497 (663)
T ss_pred HHHHHHhceeEEEEcCH
Confidence 89999999999997754
|
This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. |
| >cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-79 Score=641.98 Aligned_cols=370 Identities=31% Similarity=0.499 Sum_probs=338.1
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcc--cccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEE
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRS--MIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVI 82 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~Vvl 82 (456)
+..|+..+++.++|+++.++++.... .+.... ..+...+++++|+|||++|+|||||+.++++++++||++||+||+
T Consensus 78 a~~ev~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VI~ 156 (453)
T cd07149 78 ARKEVDRAIETLRLSAEEAKRLAGET-IPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVL 156 (453)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcc-ccccccCCCCCeeEEEEeecceEEEEECCCCChHHHHHHHHHHHHHcCCEEEE
Confidence 34689999999999999887764322 111100 012345789999999999999999999999999999999999999
Q ss_pred ecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCccccc
Q 012790 83 KVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLE 159 (456)
Q Consensus 83 Kps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lE 159 (456)
|||+.+|.++.++.+++. ++|+|+|++++++|++ +.+..|++ ++|+|+||||+++|+.|++.++ ++|+++|
T Consensus 157 Kps~~~p~~~~~l~~~l~----~ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a~--~~~~~le 230 (453)
T cd07149 157 KPASQTPLSALKLAELLL----EAGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG--LKKVTLE 230 (453)
T ss_pred ECCCcchHHHHHHHHHHH----HcCcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHcC--CCceeee
Confidence 999999999998888765 6899999999999976 45888887 8999999999999999999885 7999999
Q ss_pred CCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHH
Q 012790 160 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLE 239 (456)
Q Consensus 160 lgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~ 239 (456)
+|||||+||++|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.
T Consensus 231 lGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~ 310 (453)
T cd07149 231 LGSNAAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPLDEDTDVGPMISEA 310 (453)
T ss_pred cCCCceEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCceEEEcHhHHHHHHHHHHHHHHhCCcCCCCCCCCccccccCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCC
Q 012790 240 HSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSR 319 (456)
Q Consensus 240 ~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~ 319 (456)
+++++++++++++.+|+++++||.. .++|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++
T Consensus 311 ~~~~~~~~i~~a~~~ga~v~~gg~~-------~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~ 383 (453)
T cd07149 311 EAERIEEWVEEAVEGGARLLTGGKR-------DGAILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSP 383 (453)
T ss_pred HHHHHHHHHHHHHHCCCEEEeCCCC-------CCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhCCC
Confidence 9999999999999999999999872 478999999999999999999999999999999999999999999999
Q ss_pred CCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEE
Q 012790 320 YGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389 (456)
Q Consensus 320 ~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~ 389 (456)
|||++||||+|.++++++++++++|.|+||+..... .+.+||||+|+||+|++||++|+++||+.|+|+
T Consensus 384 ~gLt~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~-~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~~~ 452 (453)
T cd07149 384 YGLQAGVFTNDLQKALKAARELEVGGVMINDSSTFR-VDHMPYGGVKESGTGREGPRYAIEEMTEIKLVC 452 (453)
T ss_pred cCceEEEEcCCHHHHHHHHHHcCcCeEEECCCCCCC-CCCCCcCCccccccCCCChHHHHHHhhceeEEe
Confidence 999999999999999999999999999999976433 345899999999999999999999999999985
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-79 Score=640.21 Aligned_cols=372 Identities=37% Similarity=0.596 Sum_probs=342.6
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|++..+++..... .+.. ..+...+.+++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 76 a~~ev~~~~~~l~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlKp 152 (451)
T cd07103 76 ARGEVDYAASFLEWFAEEARRIYGRT-IPSP--APGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKP 152 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcc-cccC--CCCcceEEEEeeceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEEC
Confidence 34689999999999998887654322 1111 12346789999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg 161 (456)
|+.+|.++..+.+++. ++|+|+|++++++|++ +.++.|+. ++|.|+||||+.+|+.|++.++++++|+++|+|
T Consensus 153 s~~~~~~~~~l~~~l~----~aglP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~~~aa~~~~~~~lelg 228 (451)
T cd07103 153 AEETPLSALALAELAE----EAGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAADTVKRVSLELG 228 (451)
T ss_pred CccCcHHHHHHHHHHH----HcCCCcccEEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECC
Confidence 9999999988888764 6899999999999965 66788886 899999999999999999999999999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
||||+||++|||++.|++.|++|+|.|+||.|+++++||||++++|+|+++|++.++++++|+|.++++++||++++.++
T Consensus 229 G~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~ 308 (451)
T cd07103 229 GNAPFIVFDDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAV 308 (451)
T ss_pred CCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcCcCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCC
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 321 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~g 321 (456)
+++.+++++++++|+++++||... ...|+|++|||+.++++++.++++|+||||++|++|+|+||||+++|+++||
T Consensus 309 ~~~~~~i~~a~~~ga~~l~gg~~~----~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~g 384 (451)
T cd07103 309 EKVEALVEDAVAKGAKVLTGGKRL----GLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDTPYG 384 (451)
T ss_pred HHHHHHHHHHHHCCCEEEeCCCcC----CCCCcEECCEEeeCCCCcCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCCC
Confidence 999999999999999999999732 2368899999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEE
Q 012790 322 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389 (456)
Q Consensus 322 L~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~ 389 (456)
|++||||+|.+.++++++++++|.|+||++... .+.+||||+|+||+|+++|++|+++||+.|++.
T Consensus 385 l~~~i~t~d~~~~~~~~~~l~~g~v~vN~~~~~--~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~v~ 450 (451)
T cd07103 385 LAAYVFTRDLARAWRVAEALEAGMVGINTGLIS--DAEAPFGGVKESGLGREGGKEGLEEYLETKYVS 450 (451)
T ss_pred ceEEEECCCHHHHHHHHHhCCcceEEECCCCCC--CCCCCcCCCccCcCCccchHHHHHHHhceeEEe
Confidence 999999999999999999999999999998643 356899999999999999999999999999874
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. |
| >cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-78 Score=636.40 Aligned_cols=372 Identities=32% Similarity=0.471 Sum_probs=341.5
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcc--cccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEE
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRS--MIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVI 82 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~Vvl 82 (456)
+..|+..+++.++|+++.++++.+.. .+.... ..+...+++++|+|||++|+|||||+.++++++++||++||+||+
T Consensus 96 a~~ev~~~~~~l~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~AL~aGN~vil 174 (473)
T cd07082 96 ALKEVDRTIDYIRDTIEELKRLDGDS-LPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVSKLIPALIMGNTVVF 174 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCc-ccccccccCCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHHcCCEEEE
Confidence 45699999999999999998875432 111110 123456899999999999999999999999999999999999999
Q ss_pred ecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCccccc
Q 012790 83 KVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLE 159 (456)
Q Consensus 83 Kps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lE 159 (456)
|||+.+|.++.++.+++ .++|+|+|++++++|++ +.++.|+. ++|.|+||||+++|+.|++.++ ++|+++|
T Consensus 175 Kps~~~~~~~~~l~~~l----~~aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a~--~~~~~le 248 (473)
T cd07082 175 KPATQGVLLGIPLAEAF----HDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLKKQHP--MKRLVLE 248 (473)
T ss_pred ECCCCCcHHHHHHHHHH----HHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhC--CCcEEEE
Confidence 99999999998887775 46899999999999965 56888886 8999999999999999999887 8999999
Q ss_pred CCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHH
Q 012790 160 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLE 239 (456)
Q Consensus 160 lgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~ 239 (456)
+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|.++++++++|+|.++++++||+++++
T Consensus 249 lgg~n~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~ 328 (473)
T cd07082 249 LGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADELVELLKEEVAKLKVGMPWDNGVDITPLIDPK 328 (473)
T ss_pred cCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCcCCCCeEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCC
Q 012790 240 HSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSR 319 (456)
Q Consensus 240 ~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~ 319 (456)
+++++++++++++++|+++++||.. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++
T Consensus 329 ~~~~~~~~~~~a~~~ga~~~~gg~~------~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~ 402 (473)
T cd07082 329 SADFVEGLIDDAVAKGATVLNGGGR------EGGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIELANKSN 402 (473)
T ss_pred HHHHHHHHHHHHHHCCCEEEeCCcc------CCCeEEeeEEEecCCCCCHHHhCcCcCceEEEEEeCCHHHHHHHHhCCC
Confidence 9999999999999999999999973 2389999999999999999999999999999999999999999999999
Q ss_pred CCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEE
Q 012790 320 YGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 390 (456)
Q Consensus 320 ~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~ 390 (456)
|||++||||+|.+.+.++++++++|.|+||++.... ...+||||+|+||+|++||.+|+++||+.|+++.
T Consensus 403 ~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~-~~~~pfGG~k~SG~g~~~g~~~l~~~~~~k~i~~ 472 (473)
T cd07082 403 YGLQASIFTKDINKARKLADALEVGTVNINSKCQRG-PDHFPFLGRKDSGIGTQGIGDALRSMTRRKGIVI 472 (473)
T ss_pred CCceEEEEeCCHHHHHHHHHhCCcceEEECCCCCCC-CCCCCCCcccccccCCCChHHHHHHhhceeEEEE
Confidence 999999999999999999999999999999976553 3358999999999999999999999999999865
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. |
| >PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-78 Score=660.83 Aligned_cols=380 Identities=23% Similarity=0.314 Sum_probs=332.4
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCC-------cccCCCcccccccceEEEecc-eEEEEEcCCccchHhhHHHHHHHHhc
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKP-------EYRSSGRSMIHKKAKVEFHPL-GVVGAIVSWNYPFHNIFNPMLAAVFS 76 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~P~-GVv~vi~p~N~P~~~~~~~~~~ALaa 76 (456)
+..|+..+++.++|++..+++.++. +..+... ......++.++|+ |||++|+|||||+.++++++++||++
T Consensus 97 a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~p~~GVv~~I~PwNfP~~~~~~~i~pALaa 175 (675)
T PRK11563 97 SWIDIEGGIGTLFTYASKGRRELPNDTVLVEGEVEPLSK-GGTFAGRHILTPLEGVAVHINAFNFPVWGMLEKLAPAFLA 175 (675)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhccccccccCCccccccC-CCcccceEEEeecCceEEEECCCchHHHHHHHHHHHHHHc
Confidence 4569999999999999988765421 1111100 0011257889997 99999999999999999999999999
Q ss_pred CCeEEEecCCCChhHHHHHHHHHHHHHHHcC-CCCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHH--hhc
Q 012790 77 GNGIVIKVSENASWSGCFYFRIIQAALAAVG-APENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRN--ASK 151 (456)
Q Consensus 77 GN~VvlKps~~~p~~~~~l~~l~~~~l~~aG-lp~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~--aa~ 151 (456)
||+||+|||+.+|+++.++++++. ++| +|+|++|+|+|+.. ..+.. .+|+|.||||+++|++|++. +++
T Consensus 176 GN~VV~KPse~tp~~a~~l~~~~~----eaG~~P~gv~~vv~g~~~--~~~~~~~~i~~v~FTGS~~~G~~i~~~~~a~~ 249 (675)
T PRK11563 176 GVPAIVKPATATAYLTEAVVRLIV----ESGLLPEGALQLICGSAG--DLLDHLDGQDVVTFTGSAATAQKLRAHPNVVA 249 (675)
T ss_pred CCeEEEECCCCCcHHHHHHHHHHH----HcCCCCCCcEEEeeCCHH--HHhhcCCCCCEEEEECcHHHHHHHHhhhhhhh
Confidence 999999999999999988888764 789 99999999998642 22222 79999999999999999985 458
Q ss_pred cCCcccccCCCcceEEEcCCCC-----HHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCC
Q 012790 152 TLTPVTLELGGKDAFIVCDDVD-----VPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 226 (456)
Q Consensus 152 ~~~pv~lElgGk~p~iV~~daD-----l~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~ 226 (456)
+++|+++|||||||+||++||| ++.|++.+++|+|.|+||.|++++|+|||+++||+|+++|+++++++++|+|.
T Consensus 250 ~~~~~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG~p~ 329 (675)
T PRK11563 250 NSVPFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALVDAVIEALRARLAKVVVGDPR 329 (675)
T ss_pred CCceEEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHHHhCCCccccceeEEeeHHHHHHHHHHHHHHHhcCccCCCC
Confidence 9999999999999999999995 99999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCC---CCCCCCCccccceeeecCCC--CCccchhccccCcee
Q 012790 227 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGH---LSEGAVDQYFPPTVIVNVNH--TMKLMQEEAFGPIMP 301 (456)
Q Consensus 227 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~---~~~~~~g~~~~Ptvl~~v~~--~~~i~~eE~FGPvl~ 301 (456)
++++++||++++.+++++.++|++|+++ |++++||.... .+....|+|++|||+.++++ ++.+++||+||||++
T Consensus 330 d~~t~~GPli~~~~~~~i~~~i~~a~~~-a~vl~Gg~~~~~~~~~~~~~g~f~~PTvl~~v~~~~~~~i~~eEiFGPVl~ 408 (675)
T PRK11563 330 LEGVRMGALASLEQREDVREKVAALLAA-AEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDPLEAPAVHDVEAFGPVST 408 (675)
T ss_pred CCCCcccCCcCHHHHHHHHHHHHHHHhC-CEEEECCcccccccCCCCCCCeeECCEEEeccCchhhhhHhhccccCCceE
Confidence 9999999999999999999999999988 99999996311 11123589999999999998 579999999999999
Q ss_pred EeeeCCHHHHHHHHhcCCCCceeEEecCCHHHHHHHHHhcc--cCCeeecCCcc-------cccCcCCCccCCCCCCCCC
Q 012790 302 IMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ--CGVAAINDFAS-------NYMCQSLPFGGVKDSGFGR 372 (456)
Q Consensus 302 v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~--~G~v~iN~~~~-------~~~~~~~PfGG~~~SG~G~ 372 (456)
|++|+|.||||+++|+++|||++||||+|.+.+.+++++++ +|.|+||+.+. ....+.+||||+|.||+|+
T Consensus 409 V~~~~~~~eai~~aN~s~~gL~asvft~d~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~~~~~~~pfGG~k~SG~G~ 488 (675)
T PRK11563 409 LMPYDDLDEAIELAARGKGSLVASLVTADPEVARELVLGAAPWHGRLLVLNRESAKESTGHGSPLPQLVHGGPGRAGGGE 488 (675)
T ss_pred EEecCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHhcCCEEEEcCccccccccCCCCCCcCCCcCCCCCCCCCc
Confidence 99999999999999999999999999999999999999997 99999997531 1122568999999999999
Q ss_pred c-chHHHHhccceeeEEEEcc
Q 012790 373 F-AGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 373 ~-~g~~gl~~ft~~k~v~~~~ 392 (456)
+ +|.+|+++|++.|+|...+
T Consensus 489 ~~~g~~~~~~f~~~k~~~~~~ 509 (675)
T PRK11563 489 ELGGLRGVKHYMQRTAVQGSP 509 (675)
T ss_pred cccchhHHHHhheeeeeecCH
Confidence 9 4699999999999987654
|
|
| >PRK11903 aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-78 Score=639.19 Aligned_cols=379 Identities=18% Similarity=0.256 Sum_probs=327.5
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCccc-----ccccceEEEec-ceEEEEEcCCccchHhhHHHHHHHHhcCC
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSM-----IHKKAKVEFHP-LGVVGAIVSWNYPFHNIFNPMLAAVFSGN 78 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~P-~GVv~vi~p~N~P~~~~~~~~~~ALaaGN 78 (456)
+..|+..+++.++|+++.++..........+... .....++.++| +|||++|+|||||+.++++++++||++||
T Consensus 98 a~~ev~~~i~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P~~~~~~~~~~ALaaGN 177 (521)
T PRK11903 98 SAVDIDGGIFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNFPAWGLWEKAAPALLAGV 177 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccccccccccccceEEEecCcceEEEECCcchHHHHHHHHHHHHHHcCC
Confidence 4579999999999999988665322111111000 11234678899 59999999999999999999999999999
Q ss_pred eEEEecCCCChhHHHHHHHHHHHHHHHcC-CCCCcEEEEeCCh-HhHHHHHhccCEEEecCCHHHHHHHHHHh--hccCC
Q 012790 79 GIVIKVSENASWSGCFYFRIIQAALAAVG-APENLVDVITGFA-ETGEALVSSVDKIIFVGSPGVGRMIMRNA--SKTLT 154 (456)
Q Consensus 79 ~VvlKps~~~p~~~~~l~~l~~~~l~~aG-lp~g~v~vv~g~~-~~~~~L~~~vd~i~fTGS~~~g~~v~~~a--a~~~~ 154 (456)
+||+|||+.+|+++..+.+++. ++| +|+|++++|+|++ +.++.| .++|+|+||||+++|++|++.+ +++++
T Consensus 178 ~VV~KPs~~tp~~~~~l~~~~~----~ag~lP~gv~~~v~g~~~~~~~~l-~~v~~v~fTGS~~~G~~v~~~aa~~~~~~ 252 (521)
T PRK11903 178 PVIVKPATATAWLTQRMVKDVV----AAGILPAGALSVVCGSSAGLLDHL-QPFDVVSFTGSAETAAVLRSHPAVVQRSV 252 (521)
T ss_pred eEEEEcCCcChHHHHHHHHHHH----HhCCCCcCceEEeeCCchHHHhcc-cCCCEEEEECCHHHHHHHHhhhhhhccCc
Confidence 9999999999999988888764 688 9999999999965 444433 4899999999999999999975 48899
Q ss_pred cccccCCCcceEEEcCCCC-----HHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCC
Q 012790 155 PVTLELGGKDAFIVCDDVD-----VPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGK 229 (456)
Q Consensus 155 pv~lElgGk~p~iV~~daD-----l~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~ 229 (456)
|++||||||||+||++||| ++.+++.+++++|.|+||+|++++|||||+++||+|+++|+++++++++|+|.+++
T Consensus 253 ~~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~ 332 (521)
T PRK11903 253 RVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALYDAVAEALAARLAKTTVGNPRNDG 332 (521)
T ss_pred eeEeeccccCceEEccCCcccchhHHHHHHHHHHHHHhccCCCccCCeEEEEehhHHHHHHHHHHHHHHhccCCCCCCCc
Confidence 9999999999999999999 59999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCC--CCCCCccccceeeecCCC--CCccchhccccCceeEeee
Q 012790 230 YDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLS--EGAVDQYFPPTVIVNVNH--TMKLMQEEAFGPIMPIMKF 305 (456)
Q Consensus 230 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~--~~~~g~~~~Ptvl~~v~~--~~~i~~eE~FGPvl~v~~~ 305 (456)
+++||++++.+++++.++|+.. .+|+++++||...... .+..|+|++|||+.++++ +|.+++||+||||++|++|
T Consensus 333 ~~~Gpli~~~~~~~v~~~i~~~-~~ga~vl~gg~~~~~~~~~~~~g~~~~PTvl~~~~~~~~~~i~~eE~FGPvl~V~~~ 411 (521)
T PRK11903 333 VRMGPLVSRAQLAAVRAGLAAL-RAQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAATAVHDVEVFGPVATLLPY 411 (521)
T ss_pred CccCCCCCHHHHHHHHHHHHHH-hcCCEEEECCccCCCCCCCCCCCeEEcCEEEeccCCCccchHHhCcccCCeEEEEee
Confidence 9999999999999999999964 5799999999742111 123589999999987654 4789999999999999999
Q ss_pred CCHHHHHHHHhcCCCCceeEEecCCHHHHHHHHHhc--ccCCeeecCCcc-------cccCcCCCccCCCCCCCCCcch-
Q 012790 306 NTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI--QCGVAAINDFAS-------NYMCQSLPFGGVKDSGFGRFAG- 375 (456)
Q Consensus 306 ~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l--~~G~v~iN~~~~-------~~~~~~~PfGG~~~SG~G~~~g- 375 (456)
+|.||||+++|+++|||++||||+|.+.++++++++ ++|+|+||+... ....+.+||||+|.||+|+++|
T Consensus 412 ~~~~eai~~~N~~~~gL~asvft~d~~~~~~~~~~l~~~~G~V~iN~~~~~~~~~~~~~~~~~~PfGG~k~SG~Gr~~g~ 491 (521)
T PRK11903 412 RDAAHALALARRGQGSLVASVYSDDAAFLAAAALELADSHGRVHVISPDVAALHTGHGNVMPQSLHGGPGRAGGGEELGG 491 (521)
T ss_pred CCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHHhCCEEEEcCcccccccccCCCCCCCCCCCCCCcCcCCccccc
Confidence 999999999999999999999999999999999999 899999997532 1123468999999999999955
Q ss_pred HHHHhccceeeEEE
Q 012790 376 VEGLRACCLVKSVV 389 (456)
Q Consensus 376 ~~gl~~ft~~k~v~ 389 (456)
.+++++||+.|+|.
T Consensus 492 ~~~l~~~t~~~~~~ 505 (521)
T PRK11903 492 LRALAFYHRRSAVQ 505 (521)
T ss_pred HHHHHHHhccceee
Confidence 89999999977654
|
|
| >cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-78 Score=626.27 Aligned_cols=369 Identities=32% Similarity=0.528 Sum_probs=335.7
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
...|+..+++.++|+++.++++.+++.........+...+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 56 ~~~Ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKp 135 (426)
T cd07087 56 YLTEIAVVLGEIDHALKHLKKWMKPRRVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKP 135 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcccCCccccCCCceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEEC
Confidence 34699999999999999988876544322111112345788999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh-ccCEEEecCCHHHHHHHHHHhhccCCcccccCCCc
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK 163 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~-~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgGk 163 (456)
|+.+|.++.++++++. + |+|+|++++++|+.+.+..|++ .+|.|.||||+++|+.|++.++++++|+++|+|||
T Consensus 136 s~~~p~~~~~l~~~~~----~-~~P~gv~~vv~g~~~~~~~l~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~~~lelgG~ 210 (426)
T cd07087 136 SELAPATSALLAKLIP----K-YFDPEAVAVVEGGVEVATALLAEPFDHIFFTGSPAVGKIVMEAAAKHLTPVTLELGGK 210 (426)
T ss_pred CccCHHHHHHHHHHHH----H-hCCCCEEEEEeCCchHHHHHHhCCCCEEEEeCChHHHHHHHHHHHhhCCceEEeccCC
Confidence 9999999988888875 3 5999999999998778888988 79999999999999999999999999999999999
Q ss_pred ceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHHH
Q 012790 164 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEK 243 (456)
Q Consensus 164 ~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~ 243 (456)
||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++.+++++.|+| ++++++||++++++.++
T Consensus 211 ~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~~~~-~~~~~~gpli~~~~~~~ 289 (426)
T cd07087 211 SPCIVDKDANLEVAARRIAWGKFLNAGQTCIAPDYVLVHESIKDELIEELKKAIKEFYGEDP-KESPDYGRIINERHFDR 289 (426)
T ss_pred CceEecCCCCHHHHHHHHHHHHHhccCCccccCCEEEEcHHHHHHHHHHHHHHHHHHcCCCC-ccCCCcCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999976655 57889999999999999
Q ss_pred HHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCce
Q 012790 244 LQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLG 323 (456)
Q Consensus 244 v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~ 323 (456)
+.++++++ ++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+
T Consensus 290 ~~~~i~~a-----~v~~gg~~-----~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~ 359 (426)
T cd07087 290 LASLLDDG-----KVVIGGQV-----DKEERYIAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLA 359 (426)
T ss_pred HHHHHhcc-----eEEeCCcc-----CCCCCEEeeEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhCCCCCce
Confidence 99999864 78999863 235899999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEE
Q 012790 324 CAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389 (456)
Q Consensus 324 ~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~ 389 (456)
+||||+|.+.++++++++++|.|+||+.......+.+||||+|.||+|+++|.+|+++||+.|+++
T Consensus 360 ~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~~~ 425 (426)
T cd07087 360 LYLFSEDKAVQERVLAETSSGGVCVNDVLLHAAIPNLPFGGVGNSGMGAYHGKAGFDTFSHLKSVL 425 (426)
T ss_pred EEEECCCHHHHHHHHhcCCcccEEECCcccccCCCCCCCCCCCcccCCCccCHHHHHHhccceeec
Confidence 999999999999999999999999998765444466899999999999999999999999999874
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. |
| >TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-78 Score=635.60 Aligned_cols=360 Identities=22% Similarity=0.352 Sum_probs=328.3
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++..++++.. +.++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 131 a~~ev~~~i~~l~~~a~~~~~~~~~---------------~~~~P~GVV~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKp 195 (500)
T TIGR01238 131 AIAEVREAVDFCRYYAKQVRDVLGE---------------FSVESRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKP 195 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCc---------------eeccCcceEEEECCCchHHHHHHHHHHHHHHcCCEEEEeC
Confidence 4579999999999999988665321 3689999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccC---Ccccc
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTL---TPVTL 158 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~---~pv~l 158 (456)
|+.+|.++..+.+++ .++|+|+|++|+|+|++ +.+..|+. ++|+|+||||+.+|+.|++.+++++ +|+++
T Consensus 196 s~~tp~~~~~l~~~~----~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~v~~~aa~~~~~~~~v~l 271 (500)
T TIGR01238 196 AEQTSLIAYRAVELM----QEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQREDAPVPLIA 271 (500)
T ss_pred CCCccHHHHHHHHHH----HHcCCCCCceEEEecCcchHHHHHhcCCCcCeEEEECCHHHHHHHHHHHhhcccCCceEEE
Confidence 999999998887765 47899999999999975 77888887 9999999999999999999999876 79999
Q ss_pred cCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCH
Q 012790 159 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLL 238 (456)
Q Consensus 159 ElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~ 238 (456)
|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++
T Consensus 272 ElGGknp~IV~~dAdld~Aa~~i~~~~f~nsGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~ 351 (500)
T TIGR01238 272 ETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLTMIQGAMQELKVGVPHLLTTDVGPVIDA 351 (500)
T ss_pred ecCCcCcEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceeEEcHhhHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeC--CHHHHHHHHh
Q 012790 239 EHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN--TDEEVVKLAN 316 (456)
Q Consensus 239 ~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~--~~~eai~~~n 316 (456)
.++++++++|+++.+.|++++.++.... .....|+|++|||+.+ ++|.+++||+||||++|++|+ ++||||+++|
T Consensus 352 ~~~~~~~~~i~~a~~~Ga~l~~~~~~~~-~~~~~g~f~~PTvl~~--~~~~~~~eE~FgPvl~v~~~~~~~~deai~~~N 428 (500)
T TIGR01238 352 EAKQNLLAHIEHMSQTQKKIAQLTLDDS-RACQHGTFVAPTLFEL--DDIAELSEEVFGPVLHVVRYKARELDQIVDQIN 428 (500)
T ss_pred HHHHHHHHHHHHHHHcCCEEEeeccCCC-CCCCCCeeEcCEEEcc--CCchHhhCCCcCCEEEEEEeCCCCHHHHHHHHh
Confidence 9999999999999999998875432100 0123689999999984 688999999999999999998 7999999999
Q ss_pred cCCCCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCC-CcchHHHHhccceee
Q 012790 317 DSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVK 386 (456)
Q Consensus 317 ~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G-~~~g~~gl~~ft~~k 386 (456)
+++|||++||||+|.+.++++++++++|.|+||+...+...+.+||||+|+||+| +.+|.+++++||+.|
T Consensus 429 ~~~~gLs~~vfT~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~~~~~~~~k 499 (500)
T TIGR01238 429 QTGYGLTMGVHSRIETTYRWIEKHARVGNCYVNRNQVGAVVGVQPFGGQGLSGTGPKAGGPHYLYRLTQVQ 499 (500)
T ss_pred CCCCCCeEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCccCCHHHHHHHHhhc
Confidence 9999999999999999999999999999999999765544455799999999999 799999999999876
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase. |
| >PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-76 Score=660.68 Aligned_cols=376 Identities=22% Similarity=0.393 Sum_probs=341.6
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhC-CcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEe
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLK-PEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIK 83 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlK 83 (456)
+..|+..+++.++|++..++++.. +...+.+ .+..++++++|+|||++|+|||||+.+.++++++||++||+||+|
T Consensus 642 a~~EV~eaid~lr~ya~~a~~~~~~~~~l~g~---~ge~n~~~~~P~GVv~~IsPwNfPlai~~~~i~aALaaGNtVIlK 718 (1038)
T PRK11904 642 AIAEVREAVDFCRYYAAQARRLFGAPEKLPGP---TGESNELRLHGRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIAK 718 (1038)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCcccCCC---CCceeEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEee
Confidence 457999999999999999988763 2222221 245678999999999999999999999999999999999999999
Q ss_pred cCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhcc---CCccc
Q 012790 84 VSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKT---LTPVT 157 (456)
Q Consensus 84 ps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~---~~pv~ 157 (456)
||+.+|+++..+.+++ .++|+|+|++|+|+|++ +.+..|+. ++|.|+||||+++|+.|++.++++ ++|++
T Consensus 719 Pse~tpl~a~~l~~ll----~eAGlP~gvl~lv~G~g~~vg~~Lv~~p~v~~V~FTGS~~~g~~I~~~~A~~~g~~~pvi 794 (1038)
T PRK11904 719 PAEQTPLIAAEAVKLL----HEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTLAARDGPIVPLI 794 (1038)
T ss_pred CCCcCHHHHHHHHHHH----HHhCcCcceEEEeeCCchHHHHHHhcCCCcCeEEEECCHHHHHHHHHHHhhccCCCceEE
Confidence 9999999998888775 47999999999999976 57889987 899999999999999999998865 78999
Q ss_pred ccCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccC
Q 012790 158 LELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCL 237 (456)
Q Consensus 158 lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~ 237 (456)
+|+|||||+||++|||++.|++.+++|+|.|+||.|+|+++||||++++|+|+++|+++++++++|+|.+.++++||+|+
T Consensus 795 ~ElGGkNa~IV~~dAdld~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~fl~~L~~~~~~l~vGdp~d~~t~~GPvI~ 874 (1038)
T PRK11904 795 AETGGQNAMIVDSTALPEQVVDDVVTSAFRSAGQRCSALRVLFVQEDIADRVIEMLKGAMAELKVGDPRLLSTDVGPVID 874 (1038)
T ss_pred EEcCCcCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEeHHHHHHHHHHHHHHHHhccCCCcccccCCccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeC--CHHHHHHHH
Q 012790 238 LEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN--TDEEVVKLA 315 (456)
Q Consensus 238 ~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~--~~~eai~~~ 315 (456)
+.+++++.++|+++.+ |+++++||...+ ....|+|++|||+.. +++.+++||+||||++|++|+ ++||||+++
T Consensus 875 ~~a~~~l~~~I~~a~~-ga~vl~gg~~~~--~~~~G~fv~PTvi~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeaI~~i 949 (1038)
T PRK11904 875 AEAKANLDAHIERMKR-EARLLAQLPLPA--GTENGHFVAPTAFEI--DSISQLEREVFGPILHVIRYKASDLDKVIDAI 949 (1038)
T ss_pred HHHHHHHHHHHHHHHc-CCEEEeCCCCCC--CCCCceEEeeEEEcc--CCcHHhCCCCcCcEEEEEEeCCCCHHHHHHHH
Confidence 9999999999999875 899999987421 113589999999963 677899999999999999997 799999999
Q ss_pred hcCCCCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCC-CcchHHHHhccceeeEEEEcc
Q 012790 316 NDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 316 n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G-~~~g~~gl~~ft~~k~v~~~~ 392 (456)
|+++|||+++|||+|.+.++++++++++|+|+||+..+....+..||||+|.||+| +.+|+++|++|++.|+|..+.
T Consensus 950 N~t~yGLt~~IfS~d~~~~~~~~~~l~aG~vyIN~~~~ga~vg~qPFGG~~~SG~G~kaGG~~~L~~f~~~ktv~~~~ 1027 (1038)
T PRK11904 950 NATGYGLTLGIHSRIEETADRIADRVRVGNVYVNRNQIGAVVGVQPFGGQGLSGTGPKAGGPHYLLRFATEKTVTVNT 1027 (1038)
T ss_pred hCCCCCCEEEEEcCCHHHHHHHHHhCCEEEEEEeCCCccCCCCCCCCCCCCCCCCCCccchHHHHHHHhceEEEEEcc
Confidence 99999999999999999999999999999999999766655556799999999999 688999999999999998764
|
|
| >cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-75 Score=608.86 Aligned_cols=358 Identities=22% Similarity=0.293 Sum_probs=310.0
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..||..+++.++|+++..++...+.. ..+....+.+++++++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 99 a~~Ev~~~~~~~~~~a~~~~~~~g~~~-~~~~~~~~~~~~v~r~P~GVV~~I~PwNfP~~l~~~~ia~ALaaGN~VVlKP 177 (489)
T cd07126 99 ALGEVVVTRKFLENFAGDQVRFLARSF-NVPGDHQGQQSSGYRWPYGPVAIITPFNFPLEIPALQLMGALFMGNKPLLKV 177 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcee-ccCCCCCCceeEEEEecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEEC
Confidence 467999999999999998877654321 1011112456789999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgG 162 (456)
|+.+|+++.++++++. ++|+|+|++|+|+|+++.+..++. ++|+|+||||+++|++|+..++ +++++|+||
T Consensus 178 Se~tp~~~~~l~~~~~----~aGlP~gv~~vv~G~~~~~~~l~~~~~v~~V~FTGS~~vGr~i~~~~g---~k~~lElgg 250 (489)
T cd07126 178 DSKVSVVMEQFLRLLH----LCGMPATDVDLIHSDGPTMNKILLEANPRMTLFTGSSKVAERLALELH---GKVKLEDAG 250 (489)
T ss_pred CCCCCHHHHHHHHHHH----HhCcCcCcEEEEeCCchhHHHHhcCCCCCEEEEECCHHHHHHHHHHhC---CCEEeecCC
Confidence 9999999998887764 789999999999997654555664 9999999999999999998887 578999999
Q ss_pred cceEEEcCCC-CHHHHHHHHHHHHhhCCCCCcccCCeEEEehhh-HHHHHHHHHHHHhccccCCCCCCCCccccccCHHH
Q 012790 163 KDAFIVCDDV-DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDI-YALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 240 (456)
Q Consensus 163 k~p~iV~~da-Dl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i-~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~ 240 (456)
|||+||++|| |++.|++.+++++|.|+||+|++++|+|||+++ +|+|+++|++.++++++|+ +++||+++..
T Consensus 251 ~~~~IV~~Da~dld~a~~~~~~g~f~naGQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~~g~-----~~~Gpli~~~- 324 (489)
T cd07126 251 FDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQAGILDKLKALAEQRKLED-----LTIGPVLTWT- 324 (489)
T ss_pred CCceEECCCcccHHHHHHHHHHHHHhcCCCcCCCCceEEEeCcchHHHHHHHHHHHHHhcccCC-----CcCCCCcCHH-
Confidence 9999999999 999999999999999999999999999999995 6999999999999998875 4799999998
Q ss_pred HHHHHHHHHHHHh-cCCeEeecCCCCCCCCCCCC-ccccceeeec------CCCCCccchhccccCceeEeeeCC--HHH
Q 012790 241 SEKLQNLVNDALD-KGAEILARGSFGHLSEGAVD-QYFPPTVIVN------VNHTMKLMQEEAFGPIMPIMKFNT--DEE 310 (456)
Q Consensus 241 ~~~v~~~i~~a~~-~Ga~v~~gG~~~~~~~~~~g-~~~~Ptvl~~------v~~~~~i~~eE~FGPvl~v~~~~~--~~e 310 (456)
.+++.++++++++ +|+++++||...+......+ .|++|||+.. ++++|++++||+||||++|++|+| +||
T Consensus 325 ~~~v~~~i~~a~~~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~~~de 404 (489)
T cd07126 325 TERILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVTTEVFGPFQVVTEYKDEQLPL 404 (489)
T ss_pred HHHHHHHHHHHHhCCCCEEEeCCcccccccccCCcceecCeEEEeccccccCCCCCHHHhCCCcCCEEEEEEECCCCHHH
Confidence 9999999999997 89999999974211000123 3899999942 678999999999999999999999 999
Q ss_pred HHHHHhcCCCCceeEEecCCHHHHHHHHHhcccCC--eeecCCcccccCc--CCCccCCCCCCCCCcchH
Q 012790 311 VVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGV--AAINDFASNYMCQ--SLPFGGVKDSGFGRFAGV 376 (456)
Q Consensus 311 ai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~--v~iN~~~~~~~~~--~~PfGG~~~SG~G~~~g~ 376 (456)
||+++|+++|||++||||+|.++++++++++++|. |+||+........ .+||||+|+||+|+++..
T Consensus 405 ai~~aN~~~~gL~~~vft~d~~~~~~~~~~~~~G~~~v~~n~~~~~~~~~~~~~pfgg~k~sg~g~~~~~ 474 (489)
T cd07126 405 VLEALERMHAHLTAAVVSNDIRFLQEVLANTVNGTTYAGIRARTTGAPQNHWFGPAGDPRGAGIGTPEAI 474 (489)
T ss_pred HHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEEEecCCCCCCCcccCcCCCCCCcccCCCCHhHH
Confidence 99999999999999999999999999999999999 6689765544221 289999999999986543
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. |
| >cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-74 Score=605.27 Aligned_cols=366 Identities=21% Similarity=0.296 Sum_probs=323.1
Q ss_pred hHHHHHHHHHHHHHHHHhhhh--hhCCcccCC-C--cccccccceEEEecceEEEEEcCCccchHh--hHHHHHHHHhcC
Q 012790 5 SLGEIMTTCEKITWLLSEGEK--WLKPEYRSS-G--RSMIHKKAKVEFHPLGVVGAIVSWNYPFHN--IFNPMLAAVFSG 77 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~--~~~~~~~~~-~--~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~--~~~~~~~ALaaG 77 (456)
+..|+..+++.++|+++.+++ |........ + ........++.++|+|||++|+|||||+.+ .++++++||++|
T Consensus 56 ~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaG 135 (454)
T cd07129 56 LQGELGRTTGQLRLFADLVREGSWLDARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAG 135 (454)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCccccccccccccCCCCCccceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcC
Confidence 346999999999999988764 332211000 0 001123457899999999999999999987 458999999999
Q ss_pred CeEEEecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhc--c
Q 012790 78 NGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASK--T 152 (456)
Q Consensus 78 N~VvlKps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~--~ 152 (456)
|+||+|||+.+|+++.++++++.++|.++|+|+|++|+|+|++ +.+..|++ .+|.|+||||+.+|+.|++.+++ +
T Consensus 136 N~VVlKps~~~p~t~~~l~~~~~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~ 215 (454)
T cd07129 136 CPVVVKAHPAHPGTSELVARAIRAALRATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPE 215 (454)
T ss_pred CeEEEEcCCCCchHHHHHHHHHHHHHHHhCCChhheEEeeCCcHHHHHHHhcCCCccEEEEeCChHHHHHHHHHhhccCc
Confidence 9999999999999999999999999999999999999999965 78899997 89999999999999999999998 6
Q ss_pred CCcccccCCCcceEEEcCCC---CHHHHHHHHHHHHhhCCCCCcccCCeEEEehh-hHHHHHHHHHHHHhccccCCCCCC
Q 012790 153 LTPVTLELGGKDAFIVCDDV---DVPHVAQIAVRAALQSSGQNCAGAERFYVHRD-IYALFVSQVAKIVKSVSAGPPLAG 228 (456)
Q Consensus 153 ~~pv~lElgGk~p~iV~~da---Dl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~~g~~~~~ 228 (456)
++|+++|||||||+||++|| |++.|++.+++++|.|+||.|+|++|||||++ ++|+|+++|+++++++++
T Consensus 216 ~~p~~lElGG~n~~iV~~da~~~dl~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~~i~d~f~~~l~~~~~~~~~------ 289 (454)
T cd07129 216 PIPFYAELGSVNPVFILPGALAERGEAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAPA------ 289 (454)
T ss_pred cceeEeecCCcCcEEEeCCcchHHHHHHHHHHHHHHhcCCCCeecCCceEEEeCcccHHHHHHHHHHHHhccCC------
Confidence 99999999999999999999 89999999999999999999999999999999 999999999999999875
Q ss_pred CCccccccCHHHHHHHHHHHHHHHhc-CCeEeecCCCCCCCCCCCCccccceeeecCC---CCCccchhccccCceeEee
Q 012790 229 KYDMGALCLLEHSEKLQNLVNDALDK-GAEILARGSFGHLSEGAVDQYFPPTVIVNVN---HTMKLMQEEAFGPIMPIMK 304 (456)
Q Consensus 229 ~~~~gpli~~~~~~~v~~~i~~a~~~-Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~---~~~~i~~eE~FGPvl~v~~ 304 (456)
||++++.+.++..+.|++++++ |+++++||.. ...|+|++|||+...+ ++|++++||+||||++|++
T Consensus 290 ----g~~~~~~~~~~~~~~i~~a~~~~ga~~l~gg~~-----~~~g~~~~Ptvl~~~~~~~~~~~i~~~E~FGPv~~v~~ 360 (454)
T cd07129 290 ----QTMLTPGIAEAYRQGVEALAAAPGVRVLAGGAA-----AEGGNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVR 360 (454)
T ss_pred ----CCCcChHHHHHHHHHHHHHHhcCCcEEEeCCCc-----CCCCCccCCEEEEccCCccccchhhcccCCCCeEEEEE
Confidence 4667777778888888998888 9999999973 2368999999998665 6899999999999999999
Q ss_pred eCCHHHHHHHHhcCCCCceeEEecCC--HHHHHHHHHhc--ccCCeeecCCccccc-CcCCCccC-CCCCCCCCc--chH
Q 012790 305 FNTDEEVVKLANDSRYGLGCAVFSGS--QHRAREIAAQI--QCGVAAINDFASNYM-CQSLPFGG-VKDSGFGRF--AGV 376 (456)
Q Consensus 305 ~~~~~eai~~~n~~~~gL~~~vft~d--~~~~~~~~~~l--~~G~v~iN~~~~~~~-~~~~PfGG-~~~SG~G~~--~g~ 376 (456)
|+|.||||+++|+++|||++||||+| .+.+++++++| ++|+|+||++..... .+.+|||| +|.||+|++ +|+
T Consensus 361 ~~~~~eai~~~n~~~~gL~a~vft~d~~~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~pfgG~~k~sg~g~~~~~g~ 440 (454)
T cd07129 361 YDDAAELLAVAEALEGQLTATIHGEEDDLALARELLPVLERKAGRLLFNGWPTGVEVCPAMVHGGPYPATTDPRFTSVGT 440 (454)
T ss_pred eCCHHHHHHHHhcCCCCcEEEEEccCchHHHHHHHHHHHHhhCcEEEECCCCccccccCCCCCCCCcCCCCCCccccccH
Confidence 99999999999999999999999999 78999999999 699999998754432 23689999 999999999 899
Q ss_pred HHHhcccee
Q 012790 377 EGLRACCLV 385 (456)
Q Consensus 377 ~gl~~ft~~ 385 (456)
+++++||++
T Consensus 441 ~~~~~~~~~ 449 (454)
T cd07129 441 AAIERFLRP 449 (454)
T ss_pred HHHHHhccc
Confidence 999999875
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. |
| >cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-73 Score=595.44 Aligned_cols=376 Identities=37% Similarity=0.606 Sum_probs=347.7
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEE
Q 012790 3 DASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVI 82 (456)
Q Consensus 3 ~~~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~Vvl 82 (456)
+....|+..+++.++++++.+++|.+++.... ......+++++|+|||++|+|||||+.+.++++++||++||+||+
T Consensus 53 ~~~~~ei~~~i~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vil 129 (432)
T cd07078 53 EEALGEVARAADTFRYYAGLARRLHGEVIPSP---DPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVL 129 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCcccccc---CCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEE
Confidence 34567999999999999999998876543111 124567899999999999999999999999999999999999999
Q ss_pred ecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChH-hHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCccccc
Q 012790 83 KVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLE 159 (456)
Q Consensus 83 Kps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~-~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lE 159 (456)
|||+.+|.++..+.+++. ++|+|++++++++|+.+ .+..|+. ++|.|.||||..+++.|++.++++++|+++|
T Consensus 130 kps~~~~~~~~~l~~~l~----~ag~p~~~~~~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~~~~v~~~a~~~~~~~~~e 205 (432)
T cd07078 130 KPSELTPLTALLLAELLA----EAGLPPGVLNVVTGDGDEVGAALASHPRVDKISFTGSTAVGKAIMRAAAENLKRVTLE 205 (432)
T ss_pred ECCCCChHHHHHHHHHHH----HcCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhccCcEEEe
Confidence 999999999998888765 68999999999999764 7788887 7899999999999999999999999999999
Q ss_pred CCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHH
Q 012790 160 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLE 239 (456)
Q Consensus 160 lgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~ 239 (456)
+||+||+||++|+|++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++++
T Consensus 206 ~gg~~~~iV~~~ad~~~aa~~i~~~~~~~~Gq~C~a~~~i~v~~~~~~~~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~~ 285 (432)
T cd07078 206 LGGKSPLIVFDDADLDAAVKGAVFGAFGNAGQVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAA 285 (432)
T ss_pred cCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcHHHHHHHHHHHHHHHHccCcCCCCCCCCCCCCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCC
Q 012790 240 HSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSR 319 (456)
Q Consensus 240 ~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~ 319 (456)
+++++.++++++.++|+++++||.... ...|.|++|||+.++++++++++||+||||++|++|+++||||+++|+.+
T Consensus 286 ~~~~~~~~i~~~~~~g~~~~~gg~~~~---~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~ 362 (432)
T cd07078 286 QLDRVLAYIEDAKAEGAKLLCGGKRLE---GGKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTE 362 (432)
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCccCC---CCCCcEEccEEEecCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCC
Confidence 999999999999999999999987421 11489999999999999999999999999999999999999999999999
Q ss_pred CCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEE
Q 012790 320 YGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389 (456)
Q Consensus 320 ~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~ 389 (456)
+||++||||+|.+.++++++++++|.|+||+...+ ..+.+||||.|.||+|++||++|+++||+.|++.
T Consensus 363 ~~l~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~-~~~~~pfgG~~~sg~g~~~g~~~~~~~~~~k~v~ 431 (432)
T cd07078 363 YGLAAGVFTRDLERALRVAERLEAGTVWINDYSVG-AEPSAPFGGVKQSGIGREGGPYGLEEYTEPKTVT 431 (432)
T ss_pred cCceEEEECCCHHHHHHHHHhcCcceEEECCCCCC-CCCCCCcCCcCcCcCCccchHHHHHHhhceEEEE
Confidence 99999999999999999999999999999998776 4567999999999999999999999999999975
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer |
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-74 Score=647.51 Aligned_cols=361 Identities=23% Similarity=0.391 Sum_probs=330.5
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..||..+++.++||+..+++.+. .+.++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 739 A~~EV~eaidflryyA~~a~~~~~---------------~~~~~PlGVV~~IsPWNFPlai~~g~iaaALaAGN~VV~KP 803 (1318)
T PRK11809 739 AIAEVREAVDFLRYYAGQVRDDFD---------------NDTHRPLGPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKP 803 (1318)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC---------------CceeecccEEEEECCCccHHHHHHHHHHHHHHcCCeEEEeC
Confidence 567999999999999988765311 24689999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccC------Cc
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTL------TP 155 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~------~p 155 (456)
|+++|+++..+++++. +||+|+|++|+|+|++ +.+..|+. +|+.|+||||+++|+.|++.+++++ +|
T Consensus 804 seqTpl~a~~lv~ll~----eAGlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt~tg~~I~~~aA~~l~~~g~~~p 879 (1318)
T PRK11809 804 AEQTPLIAAQAVRILL----EAGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLAGRLDPQGRPIP 879 (1318)
T ss_pred CCCcHHHHHHHHHHHH----HhCcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCHHHHHHHHHHHhhhcccccCcee
Confidence 9999999988888764 7999999999999976 57899987 9999999999999999999998876 89
Q ss_pred ccccCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccc
Q 012790 156 VTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGAL 235 (456)
Q Consensus 156 v~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl 235 (456)
+++|+|||||+||++|||+|.|++.+++|+|.|+||.|+|++++|||++++|+|+++|+++++++++|+|.+.++++||+
T Consensus 880 liaElGGkNa~IVdsdAdle~Av~~iv~sAF~~aGQrCsA~~rl~V~e~Iad~fl~~L~~a~~~l~vGdP~~~~tdvGPv 959 (1318)
T PRK11809 880 LIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDDVADRTLKMLRGAMAECRMGNPDRLSTDIGPV 959 (1318)
T ss_pred EEEecCCccceEECCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEcHHHHHHHHHHHHHHHHhcCCCCcccccCCcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeC--CHHHHHH
Q 012790 236 CLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN--TDEEVVK 313 (456)
Q Consensus 236 i~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~--~~~eai~ 313 (456)
|++.+++++.++|++++++|++++.||.... .....|+|++|||+.. +++.++++|+||||++|++|+ ++||+|+
T Consensus 960 Id~~a~~~i~~~I~~a~~~G~~v~~g~~~~~-~~~~~G~fv~PTIi~~--~~~~~l~eEiFGPVL~V~~~~~~~ldeaI~ 1036 (1318)
T PRK11809 960 IDAEAKANIERHIQAMRAKGRPVFQAARENS-EDWQSGTFVPPTLIEL--DSFDELKREVFGPVLHVVRYNRNQLDELIE 1036 (1318)
T ss_pred CCHHHHHHHHHHHHHHHHcCCEEEecCCCCC-CCCCCCeEEeeEEEec--cchhhhcCcccCceEEEEEeCCCCHHHHHH
Confidence 9999999999999999999999998875311 0114599999999974 678899999999999999996 7999999
Q ss_pred HHhcCCCCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCC-CcchHHHHhccceeeE
Q 012790 314 LANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKS 387 (456)
Q Consensus 314 ~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G-~~~g~~gl~~ft~~k~ 387 (456)
++|+++|||+++|||+|.+.++++++++++|+|+||+.......+..||||+|.||+| +.+|++++..|+..+.
T Consensus 1037 ~iN~t~yGLt~gV~Srd~~~~~~v~~~l~aGnvyINr~~~gavvg~qPFGG~g~SG~G~kaGGp~yL~~f~~~~~ 1111 (1318)
T PRK11809 1037 QINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAGGPLYLYRLLATRP 1111 (1318)
T ss_pred HHhcCCCCceEEEEeCCHHHHHHHHHhCCEeEEEECCCCcCCCcCCCCCCCcCcCCCCCCCCCHHHHHHHhccCC
Confidence 9999999999999999999999999999999999998765544455799999999999 5899999999998874
|
|
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-73 Score=644.05 Aligned_cols=363 Identities=22% Similarity=0.378 Sum_probs=333.4
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..||..+++.++|++..++++.. ...++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 647 a~~Ev~eaid~lr~ya~~a~~~~~---------------~~~~~P~GVv~~IsPwNfPlai~~g~i~aALaaGN~VV~KP 711 (1208)
T PRK11905 647 AIAEVREAVDFLRYYAAQARRLLN---------------GPGHKPLGPVVCISPWNFPLAIFTGQIAAALVAGNTVLAKP 711 (1208)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC---------------CceecCccEEEEEcCCcCHHHHHHHHHHHHHHcCCEEEEeC
Confidence 467999999999999998776431 13578999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccC---Ccccc
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTL---TPVTL 158 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~---~pv~l 158 (456)
|+.+|+++..+.+++. ++|+|+|++|+|+|++ +.+..|++ +++.|+||||+++|+.|++.+++++ +|+++
T Consensus 712 se~tpl~a~~l~~ll~----eAGlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt~vg~~I~~~~A~~~~~~~pli~ 787 (1208)
T PRK11905 712 AEQTPLIAARAVRLLH----EAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSGPPVPLIA 787 (1208)
T ss_pred CcccHHHHHHHHHHHH----HcCCCcccEEEeeCCchHHHHHHHcCCCcCEEEEeCCHHHHHHHHHHHHhhcCCCCeEEE
Confidence 9999999998887764 7999999999999976 58899997 9999999999999999999998764 89999
Q ss_pred cCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCH
Q 012790 159 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLL 238 (456)
Q Consensus 159 ElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~ 238 (456)
|+|||||+||++|||+|.|++.+++|+|.|+||.|+|++++|||++++|+|+++|+++++++++|+|.+.++++||+|++
T Consensus 788 ElGGkN~~IV~~dAdle~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~f~e~L~~~~~~l~vGdP~d~~t~~GPvId~ 867 (1208)
T PRK11905 788 ETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRCSALRVLCLQEDVADRVLTMLKGAMDELRIGDPWRLSTDVGPVIDA 867 (1208)
T ss_pred ecCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEehhHHHHHHHHHHHHHHHhcCCCchhccCCccCccCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeC--CHHHHHHHHh
Q 012790 239 EHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN--TDEEVVKLAN 316 (456)
Q Consensus 239 ~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~--~~~eai~~~n 316 (456)
.+++++.++|++++++|+.++.|+... ....|+|+.|||+.. +++.+++||+||||++|++|+ ++||+|+++|
T Consensus 868 ~a~~~i~~~I~~a~~~G~~l~~g~~~~---~~~~G~fv~PTVl~~--~~~~~~~eEiFGPVL~V~~y~~~dldeaI~~iN 942 (1208)
T PRK11905 868 EAQANIEAHIEAMRAAGRLVHQLPLPA---ETEKGTFVAPTLIEI--DSISDLEREVFGPVLHVVRFKADELDRVIDDIN 942 (1208)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEccCCC---CCCCCeEEeeEEEec--CChHHhcCCccCceEEEEEeCCCCHHHHHHHHh
Confidence 999999999999999999887776421 114699999999973 678899999999999999997 7999999999
Q ss_pred cCCCCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCC-CcchHHHHhccceeeEEEEc
Q 012790 317 DSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 317 ~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G-~~~g~~gl~~ft~~k~v~~~ 391 (456)
+++|||+++|||+|.+.++++++++++|+|+||+..+....+..||||+|.||+| +.+|+++|++|++.|++...
T Consensus 943 ~t~yGLt~~I~S~d~~~~~~~~~~l~aGnvyIN~~~~ga~vg~qPFGG~~~SG~G~kaGGp~~L~~f~~~k~v~~~ 1018 (1208)
T PRK11905 943 ATGYGLTFGLHSRIDETIAHVTSRIRAGNIYVNRNIIGAVVGVQPFGGEGLSGTGPKAGGPLYLGRLVREAPTPIP 1018 (1208)
T ss_pred cCCCCceEEEEcCCHHHHHHHHHhCCEeEEEECCCCCCCccCCCCCCCCCCCCCCCcCCCHHHHHHHhhcceeecc
Confidence 9999999999999999999999999999999999766655556899999999999 58999999999999998754
|
|
| >cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-72 Score=582.12 Aligned_cols=367 Identities=18% Similarity=0.222 Sum_probs=316.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhh-hCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 6 LGEIMTTCEKITWLLSEGEKW-LKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 6 ~~Ei~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
..|+..+++.++|++..++.. ...+.............+++++|+|||++|+|||||+.+++.++++||++||+||+||
T Consensus 56 ~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKp 135 (442)
T cd07084 56 AENICGDQVQLRARAFVIYSYRIPHEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKP 135 (442)
T ss_pred hhhhcchHHHHHHHHHHHHhccccccccccCCCCccccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEEC
Confidence 468999999999999887653 1111110000001235689999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCC-CCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGA-PENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGl-p~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg 161 (456)
|+.+|.++..+.+++. ++|+ |++++++|+|+++.+..|++ ++|.|+||||+++|+.|++.+++ +|+++|||
T Consensus 136 s~~~p~~~~~l~~~l~----~ag~~P~g~~~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a~~--~~v~lElg 209 (442)
T cd07084 136 HTAVSIVMQIMVRLLH----YAGLLPPEDVTLINGDGKTMQALLLHPNPKMVLFTGSSRVAEKLALDAKQ--ARIYLELA 209 (442)
T ss_pred CCCchHHHHHHHHHHH----HhCCCCccceEEeeCCcHHHHHHHcCCCCCEEEEECCHHHHHHHHHhccC--CcEEEecc
Confidence 9999999998888865 6788 99999999998778888887 89999999999999999999885 89999999
Q ss_pred CcceEEEcCCC-CHHHHHHHHHHHHhhCCCCCcccCCeEEEehh-hHHHHHHHHHHHHhccccCCCCCCCCccccccCHH
Q 012790 162 GKDAFIVCDDV-DVPHVAQIAVRAALQSSGQNCAGAERFYVHRD-IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLE 239 (456)
Q Consensus 162 Gk~p~iV~~da-Dl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~ 239 (456)
||||+||++|| |++.+++.+++++|.|+||.|++++|+|||++ ++|+|+++|.+.++++++| ++++||+++++
T Consensus 210 G~~~~iV~~dadd~~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~~i~~~f~~~l~~~~~~~~~g-----~~~~gpl~~~~ 284 (442)
T cd07084 210 GFNWKVLGPDAQAVDYVAWQCVQDMTACSGQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLE-----DLLLGPVQTFT 284 (442)
T ss_pred CcCcEEECCChhhHHHHHHHHHHHHhcccCCeecCCcEEEEeCCccHHHHHHHHHHHHHhcccC-----ccccChhhhHH
Confidence 99999999999 69999999999999999999999999999999 9999999999999999988 56899997765
Q ss_pred HHHHHHHHHHHHHhc-CCeEeecCCCCCCC--CCCCCccccceeeecCCCCC---ccchhccccCceeEeeeCC--HHHH
Q 012790 240 HSEKLQNLVNDALDK-GAEILARGSFGHLS--EGAVDQYFPPTVIVNVNHTM---KLMQEEAFGPIMPIMKFNT--DEEV 311 (456)
Q Consensus 240 ~~~~v~~~i~~a~~~-Ga~v~~gG~~~~~~--~~~~g~~~~Ptvl~~v~~~~---~i~~eE~FGPvl~v~~~~~--~~ea 311 (456)
+.++|+++.++ |+++++||...... ....|+|++|||+.+++++| ++++||+||||++|++|+| ++||
T Consensus 285 ----~~~~i~~a~~~gga~~~~gg~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~ea 360 (442)
T cd07084 285 ----TLAMIAHMENLLGSVLLFSGKELKNHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALV 360 (442)
T ss_pred ----HHHHHHHHHhcCCcEEEeCCcccccCCCCCcCCcccCCeEEEecCcccccchHHheeccCceEEEEEeCCccHHHH
Confidence 45556666667 58999999742210 01248999999999999997 9999999999999999999 9999
Q ss_pred HHHHhcCCCCceeEEecCCHHHHHHHHHhc-ccCCeeecCCcccccCcCCCccC-CCCCCCCCcc-hHHHHhccceeeE
Q 012790 312 VKLANDSRYGLGCAVFSGSQHRAREIAAQI-QCGVAAINDFASNYMCQSLPFGG-VKDSGFGRFA-GVEGLRACCLVKS 387 (456)
Q Consensus 312 i~~~n~~~~gL~~~vft~d~~~~~~~~~~l-~~G~v~iN~~~~~~~~~~~PfGG-~~~SG~G~~~-g~~gl~~ft~~k~ 387 (456)
|+++|+++|||++||||+|.+.++++++++ ++|+|+||+.......+..|||| .|.||+|++. |.+++++||....
T Consensus 361 i~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~~G~v~iN~~~~~~~~~~~~~gG~~k~sG~g~~~~g~~~~~~~~~~~~ 439 (442)
T cd07084 361 LELLERMHGSLTAAIYSNDPIFLQELIGNLWVAGRTYAILRGRTGVAPNQNHGGGPAADPRGAGIGGPEAIKLVWRCHA 439 (442)
T ss_pred HHHHHhCCCCeeEEEEeCCHHHHHHHHHHHHhcCeEEECCCCCCCccccccCCCCCCCCCCCccccchHHhhheeeeee
Confidence 999999999999999999999999999999 99999999763333334467766 8899999985 9999999997654
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. |
| >cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-72 Score=578.16 Aligned_cols=323 Identities=20% Similarity=0.283 Sum_probs=289.4
Q ss_pred cceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCC-h
Q 012790 42 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-A 120 (456)
Q Consensus 42 ~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~-~ 120 (456)
..+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.+++++++++|.++|+|+|++|+|+|+ .
T Consensus 90 ~~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~~~~~~aGlP~gvv~~v~g~~~ 169 (429)
T cd07121 90 LTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAIAEAGGPDNLVVTVEEPTI 169 (429)
T ss_pred ceEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHHHHHHHcCCCcceEEEecCCCh
Confidence 457889999999999999999999999999999999999999999999999999999999999999999999999985 4
Q ss_pred HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCe
Q 012790 121 ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAER 198 (456)
Q Consensus 121 ~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~ 198 (456)
+.++.|++ +||+|+||||+++|+.|++. .+|+++|||||||+||++|||++.|++.|++++|.|+||.|+|++|
T Consensus 170 ~~~~~L~~~~~v~~I~fTGs~~~g~~v~~~----~k~~~lelGGk~p~iV~~dADld~Aa~~i~~~~~~n~GQ~C~a~~r 245 (429)
T cd07121 170 ETTNELMAHPDINLLVVTGGPAVVKAALSS----GKKAIGAGAGNPPVVVDETADIEKAARDIVQGASFDNNLPCIAEKE 245 (429)
T ss_pred HHHHHHHcCCCccEEEeeCCHHHHHHHHhC----CCceEeecCCCceEEEecCCCHHHHHHHHHhcccccCCCCCCccce
Confidence 77889997 89999999999999999875 4999999999999999999999999999999999999999999999
Q ss_pred EEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHHHHHHHHHHHHhc--CCeEeecCCCCCCCCCCCCccc
Q 012790 199 FYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDK--GAEILARGSFGHLSEGAVDQYF 276 (456)
Q Consensus 199 v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~--Ga~v~~gG~~~~~~~~~~g~~~ 276 (456)
||||+++||+|+++|++. . .+++++++++++.++++++.+. |++++.||.... ..+..|.|+
T Consensus 246 v~V~~~i~d~f~~~L~~~-~--------------~~~i~~~~~~~v~~~i~~a~~~~~ga~~~~gg~~~~-~~~~~G~~~ 309 (429)
T cd07121 246 VIAVDSVADYLIAAMQRN-G--------------AYVLNDEQAEQLLEVVLLTNKGATPNKKWVGKDASK-ILKAAGIEV 309 (429)
T ss_pred EEEeHHHHHHHHHHHHHC-C--------------CEEcCHHHHHHHHHhhcccCCCccccccccCcCHHH-HHHHcCCCC
Confidence 999999999999999885 1 2478999999999999998864 689999885210 001247777
Q ss_pred c---ceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCc--eeEEecCCHHHHHHHHHhcccCCeeecCC
Q 012790 277 P---PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL--GCAVFSGSQHRAREIAAQIQCGVAAINDF 351 (456)
Q Consensus 277 ~---Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL--~~~vft~d~~~~~~~~~~l~~G~v~iN~~ 351 (456)
+ |||+++++++|++++||+||||++|++|+|+||||+++|+++||| ++||||+|.++++++++++++|.|+||+.
T Consensus 310 ~~~~ptil~~v~~~~~i~~eE~FgPVl~v~~~~~~~eAi~~an~~~~GLghsa~I~t~d~~~a~~~a~~l~aG~v~iN~~ 389 (429)
T cd07121 310 PADIRLIIVETDKDHPFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVENLTKMARAMQTTIFVKNGP 389 (429)
T ss_pred CCCCeEEEEecCCCCCccccccccceEEEEEeCCHHHHHHHHHhhccCCCceEEEecCCHHHHHHHHhhCCceEEEEcCC
Confidence 7 599999999999999999999999999999999999999999999 99999999999999999999999999976
Q ss_pred cccccCcCCCccCCCCCCC--CCcchHHHHhccceeeEEEEcc
Q 012790 352 ASNYMCQSLPFGGVKDSGF--GRFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 352 ~~~~~~~~~PfGG~~~SG~--G~~~g~~gl~~ft~~k~v~~~~ 392 (456)
.. +.+||||+|+|++ |..-| +..+..|+++..+
T Consensus 390 ~~----~~~p~gG~k~s~~~~~~~~~----~~~~~~~~~~~~~ 424 (429)
T cd07121 390 SY----AGLGVGGEGYTTFTIAGPTG----EGLTSARTFTRRR 424 (429)
T ss_pred Cc----CccccCCCccceEEecCCcC----cCccChhhhheee
Confidence 33 3589999999998 54334 4447777766543
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. |
| >PRK15398 aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-71 Score=577.61 Aligned_cols=326 Identities=20% Similarity=0.280 Sum_probs=290.3
Q ss_pred ccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCC-
Q 012790 41 KKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF- 119 (456)
Q Consensus 41 ~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~- 119 (456)
...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++|.++|+|+|++++|+|.
T Consensus 121 ~~~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~~ll~~~l~eaGlP~gvv~vv~g~~ 200 (465)
T PRK15398 121 GLTLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLNEAIVAAGGPENLVVTVAEPT 200 (465)
T ss_pred ceeEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHHHHHHHHHHHcCCCCCeEEEecCCC
Confidence 4568899999999999999999999999999999999999999999999999999999999999999999999999985
Q ss_pred hHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCC
Q 012790 120 AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAE 197 (456)
Q Consensus 120 ~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~ 197 (456)
.+.++.|++ ++|+|+||||+++|+.|++ ..+|+++|+|||||+||++|||++.|++.|++|+|.|+||.|+|++
T Consensus 201 ~~~~~~L~~~~~vd~I~fTGS~~~G~~v~~----~~k~~~~elGGk~p~IV~~dADld~Aa~~i~~g~~~n~GQ~C~A~~ 276 (465)
T PRK15398 201 IETAQRLMKHPGIALLVVTGGPAVVKAAMK----SGKKAIGAGAGNPPVVVDETADIEKAARDIVKGASFDNNLPCIAEK 276 (465)
T ss_pred HHHHHHHHcCCCccEEEeeCCHHHHHHHHH----cCCceeeecCCCceEEEecCCCHHHHHHHHHHhcccCCCCcCCCCc
Confidence 477889987 7999999999999999998 3589999999999999999999999999999999999999999999
Q ss_pred eEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccc-
Q 012790 198 RFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF- 276 (456)
Q Consensus 198 ~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~- 276 (456)
|||||+++||+|+++|+++. ++++++++++++.++++++.+++++++.||..... ....|.++
T Consensus 277 rvlV~~si~d~f~~~l~~~~---------------~~li~~~~~~~v~~~l~~~~~~~~~~~~g~~~~~i-~~~~G~~~~ 340 (465)
T PRK15398 277 EVIVVDSVADELMRLMEKNG---------------AVLLTAEQAEKLQKVVLKNGGTVNKKWVGKDAAKI-LEAAGINVP 340 (465)
T ss_pred eEEEeHHHHHHHHHHHHHcC---------------CccCCHHHHHHHHHHHhhcccccchhhhCCCHHHH-HHhCCCCCC
Confidence 99999999999999999851 26899999999999999654445677776541000 01135555
Q ss_pred --cceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCc--eeEEecCCHHHHHHHHHhcccCCeeecCCc
Q 012790 277 --PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL--GCAVFSGSQHRAREIAAQIQCGVAAINDFA 352 (456)
Q Consensus 277 --~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL--~~~vft~d~~~~~~~~~~l~~G~v~iN~~~ 352 (456)
+|||+.+++++|++++||+||||++|++|+|+||||+++|+++||| ++||||+|.++++++++++++|.|+||+..
T Consensus 341 ~~~~tvl~~v~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~yGL~hs~~IfT~d~~~a~~~a~~l~~G~V~iN~~~ 420 (465)
T PRK15398 341 KDTRLLIVETDANHPFVVTELMMPVLPVVRVKDVDEAIALAVKLEHGNRHTAIMHSRNVDNLNKMARAIQTSIFVKNGPS 420 (465)
T ss_pred CCCCEEEecCCCCCchhcccccCceEEEEEeCCHHHHHHHHHhcccCCcceEEEecCCHHHHHHHHHhCCceEEEECCCC
Confidence 4899999999999999999999999999999999999999999998 999999999999999999999999999763
Q ss_pred ccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEcc
Q 012790 353 SNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 353 ~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~ 392 (456)
. +.+||||.|.|.+- -+|+.| ...|..|++..++
T Consensus 421 ~----~~~p~gg~~~s~~~-~~~~~g-~~~~~~~~~~~~~ 454 (465)
T PRK15398 421 Y----AGLGLGGEGFTTFT-IATPTG-EGVTSARTFTRRR 454 (465)
T ss_pred c----cccCcCCCCCceee-ecccCC-CCccchhhhhhhe
Confidence 2 35899999999862 237788 8888888877655
|
|
| >TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-70 Score=576.08 Aligned_cols=369 Identities=19% Similarity=0.232 Sum_probs=311.6
Q ss_pred HHHHHHHHHHHHHHhhhhhh------CCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEE
Q 012790 8 EIMTTCEKITWLLSEGEKWL------KPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIV 81 (456)
Q Consensus 8 Ei~~~~~~i~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~Vv 81 (456)
|+...++.++|+++...+.. +++...... ....+++++|+|||++|+|||||+++.++++++||++||+||
T Consensus 149 ~~~r~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~P~GVv~vI~PwNfP~~~~~~~l~~ALaaGN~VV 225 (551)
T TIGR02288 149 AQDRGLEAVAYAYREMSRIPETAVWEKPQGKNDPL---KLKKRFTIVPRGIALVIGCSTFPTWNTYPGLFASLATGNPVL 225 (551)
T ss_pred HHHHHHHHHHHHHHHHHhccCcccccccCCCCCcc---cccceEEEEecCeEEEEcCcccHHHHHHHHHHHHHHcCCeEE
Confidence 56677888999988776543 232211111 112346899999999999999999999999999999999999
Q ss_pred EecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCC-h-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCccc
Q 012790 82 IKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-A-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVT 157 (456)
Q Consensus 82 lKps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~-~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~ 157 (456)
+|||+.+|+++.++.+++.++|.++|+|+|++|+|+|+ + +.++.|+. .+++|.||||+++|+.|++.++ .++++
T Consensus 226 lKPs~~tpl~~~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~~~~~~L~~~p~v~~I~FTGSt~~G~~I~~~aa--~~~v~ 303 (551)
T TIGR02288 226 VKPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNAR--QAQVY 303 (551)
T ss_pred EECCcccchhHHHHHHHHHHHHHHcCcChhHEEEecCCCcHHHHHHHHhCCCccEEEEECCHHHHHHHHHhcc--cCcEE
Confidence 99999999999888888888899999999999999985 3 67899987 8999999999999999999887 47999
Q ss_pred ccCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehh---------hHHHHHHHHHHHHhccccCCCCCC
Q 012790 158 LELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD---------IYALFVSQVAKIVKSVSAGPPLAG 228 (456)
Q Consensus 158 lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~---------i~d~f~~~l~~~~~~~~~g~~~~~ 228 (456)
+|||||||+||++|||++.+++.+++|+|.|+||+|++++|||||++ +||+|+++|+++++++ +|+|.++
T Consensus 304 lElGGknp~IV~~dADld~aa~~i~~~~f~~sGQ~Cta~~ri~V~~~~i~~~~g~~i~def~~~L~~~~~~l-vGdp~~~ 382 (551)
T TIGR02288 304 TEKAGVNTVIIESTDDYKAMLRNLAFSLSLYSGQMCTTTQAILVPRDGIRTDQGRKSYDEVAADLATAIDGL-LGDPARA 382 (551)
T ss_pred eecCCcCeEEEcCCCCHHHHHHHHHHHHHhhCCCCCCCCCEEEEeccccccccchhHHHHHHHHHHHHHHHh-cCCcccc
Confidence 99999999999999999999999999999999999999999999999 7999999999999999 8999999
Q ss_pred CCccccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCH
Q 012790 229 KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD 308 (456)
Q Consensus 229 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~ 308 (456)
++++||++++++++++ ++++++| +++.||....++....++|++|||+...++||++++||+||||++|++|+|.
T Consensus 383 ~~~~Gplis~~~~~ri----~~a~~~G-~v~~gG~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~ 457 (551)
T TIGR02288 383 TAVLGAIQSPDTLARI----AEARALG-EVLLASTKIEHPEFPGARVRTPLLLKCDAADEAAYMQERFGPIAFVVAVDDG 457 (551)
T ss_pred cccccCcCCHHHHHHH----HHHHhCC-CEEEcCccCCCCCCCCCEEeccEEEEcCCCCCHHHhCCCcCCEEEEEEECCH
Confidence 9999999999999995 5566678 6667765322111123368899999544459999999999999999999999
Q ss_pred HHHHHHHhcC--CCC-ceeEEecCCHHHHHHHHHhc--ccCCeeecCCcccccCcCCCccCCCCCCCCC-cchHHHHhcc
Q 012790 309 EEVVKLANDS--RYG-LGCAVFSGSQHRAREIAAQI--QCGVAAINDFASNYMCQSLPFGGVKDSGFGR-FAGVEGLRAC 382 (456)
Q Consensus 309 ~eai~~~n~~--~~g-L~~~vft~d~~~~~~~~~~l--~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~-~~g~~gl~~f 382 (456)
||||+++|++ +|| |++||||+|.+.++++.+++ ..|.++||+....+.++..||++.+.||..- .+..+.--.|
T Consensus 458 deAi~~aN~~~~~~G~Lta~VfT~d~~~~~~~~~~~~~~~~~l~iN~~G~v~vN~~~~~~~~~~sg~n~~a~~~~~~~~~ 537 (551)
T TIGR02288 458 AHAVELARRSVREKGAMTVGAYTTDPEVVDAVQEAAWDAAVALSLNLTGGVFVNQSAAFSDFHGTGGNPAANASLSDGAF 537 (551)
T ss_pred HHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHHHHHHhccCeeecCCceEEEccCCCCCCCCCCCCCCccCCcccchhh
Confidence 9999999998 566 99999999999999999998 5677777776665666668999999999863 3344555555
Q ss_pred ceeeE
Q 012790 383 CLVKS 387 (456)
Q Consensus 383 t~~k~ 387 (456)
...|-
T Consensus 538 ~~~r~ 542 (551)
T TIGR02288 538 VANRF 542 (551)
T ss_pred hhcce
Confidence 55443
|
This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. |
| >cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-69 Score=573.82 Aligned_cols=370 Identities=19% Similarity=0.232 Sum_probs=319.3
Q ss_pred HHHHHHHHHHHHHHhhhhhh------CCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEE
Q 012790 8 EIMTTCEKITWLLSEGEKWL------KPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIV 81 (456)
Q Consensus 8 Ei~~~~~~i~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~Vv 81 (456)
|+..+++.++|+.+...++. +++....++. ...++.++|+||+++|+|||||+++.+.++++||++||+||
T Consensus 149 evd~a~e~~~~a~~~~~~~~~~~~w~~~~~~~~~l~---~~k~~~~~P~GVv~vI~p~nfP~~~~~~~i~~ALaaGN~VV 225 (549)
T cd07127 149 AQDRGLEAVAYAWREMSRIPPTAEWEKPQGKHDPLA---MEKTFTVVPRGVALVIGCSTFPTWNGYPGLFASLATGNPVI 225 (549)
T ss_pred HHHHHHHHHHHHHHHHHhccccccccCCCCCccccc---ccceeEEecccEEEEEeCcCChHHHHHHHHHHHHhcCCeEE
Confidence 79999999999998776643 2222111111 12256789999999999999999999999999999999999
Q ss_pred EecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh--HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCccc
Q 012790 82 IKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA--ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVT 157 (456)
Q Consensus 82 lKps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~--~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~ 157 (456)
+|||+.+|+++.++.+++.++|.|+|+|+|+||+|+|++ +.++.|+. .+++|+||||+.+|+.|++.++ .+|++
T Consensus 226 vKPs~~a~ls~~~~~~~i~~~l~eAGlP~gvv~~v~g~~~~~~~~~L~~~p~v~~I~FTGS~~~G~~i~~~a~--~~~v~ 303 (549)
T cd07127 226 VKPHPAAILPLAITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWLEANAR--QAQVY 303 (549)
T ss_pred EECCcccchhHHHHHHHHHHHHHHcCcCcccEEEEeCCCcHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhc--cCcEE
Confidence 999999999999888999999999999999999999853 67888887 9999999999999999999998 47999
Q ss_pred ccCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehh---------hHHHHHHHHHHHHhccccCCCCCC
Q 012790 158 LELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD---------IYALFVSQVAKIVKSVSAGPPLAG 228 (456)
Q Consensus 158 lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~---------i~d~f~~~l~~~~~~~~~g~~~~~ 228 (456)
+|+|||||+||++|||++.+++.+++|+|.|+||.|++++|||||++ +||+|+++|+++++++ +|+|.+.
T Consensus 304 ~ElGGkn~~IV~~dADl~~aa~~i~~~~f~~sGQ~C~a~~ri~V~~s~i~~~~g~~i~d~f~~~L~~~~~~l-~Gdp~~~ 382 (549)
T cd07127 304 TEKAGVNTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTTPQNIYVPRDGIQTDDGRKSFDEVAADLAAAIDGL-LADPARA 382 (549)
T ss_pred EecCCcCeEEECCCCCHHHHHHHHHHHHHccCCCCCCCCCEEEEECCccccccchhHHHHHHHHHHHHHHHh-cCCcccc
Confidence 99999999999999999999999999999999999999999999999 8999999999999999 8999999
Q ss_pred CCccccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCH
Q 012790 229 KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD 308 (456)
Q Consensus 229 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~ 308 (456)
.+++||++++++++++.+ +++.|+ +++||....++....+++++|||+.+.+++|++++||+||||++|++|+|.
T Consensus 383 ~~~~Gpli~~~~~~ri~~----a~~~g~-vl~gg~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~ 457 (549)
T cd07127 383 AALLGAIQSPDTLARIAE----ARQLGE-VLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFGPIAFVVATDST 457 (549)
T ss_pred ccccCCcCCHHHHHHHHH----HHhCCC-EEEcCCcCCCcCCCCceEEeCEEEEeCCCCCHHHcCCCcCceEEEEEeCCH
Confidence 999999999999999865 444565 778876432221123456799999988899999999999999999999999
Q ss_pred HHHHHHHhcCC--C-CceeEEecCCHHHHHHHHHhc-ccC-CeeecCCcccccCcCCCccCCCCCCCC-CcchHHHHhcc
Q 012790 309 EEVVKLANDSR--Y-GLGCAVFSGSQHRAREIAAQI-QCG-VAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRAC 382 (456)
Q Consensus 309 ~eai~~~n~~~--~-gL~~~vft~d~~~~~~~~~~l-~~G-~v~iN~~~~~~~~~~~PfGG~~~SG~G-~~~g~~gl~~f 382 (456)
||||+++|++. + ||++||||+|.+.++++.+++ .+| .++||+....+.++.+||||++.||.. +.+.......|
T Consensus 458 ~eai~~an~~~~~~ggLt~sVfs~D~~~~~~~~~~~~~~~~~~~iN~tg~v~~~q~~~Fg~~~~sg~n~~a~~~~~~~~f 537 (549)
T cd07127 458 DHSIELARESVREHGAMTVGVYSTDPEVVERVQEAALDAGVALSINLTGGVFVNQSAAFSDFHGTGANPAANAALTDGAF 537 (549)
T ss_pred HHHHHHHHhcccCCCCceEEEEcCCHHHHHHHHHHHHHhcCcEEEcCCceEEEecCcCCCCCCCCCCCcccccccchhhh
Confidence 99999999974 4 699999999999999999995 454 999998887787877889999999987 44455666666
Q ss_pred ceeeEE
Q 012790 383 CLVKSV 388 (456)
Q Consensus 383 t~~k~v 388 (456)
...|-.
T Consensus 538 v~~r~~ 543 (549)
T cd07127 538 VANRFR 543 (549)
T ss_pred hhcceE
Confidence 655543
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. |
| >cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-70 Score=561.26 Aligned_cols=328 Identities=22% Similarity=0.246 Sum_probs=283.6
Q ss_pred HHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecCC
Q 012790 7 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 86 (456)
Q Consensus 7 ~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~ 86 (456)
.|+..+++.++|++...+.. . +..+..........+++++|+|||++|+|| +| .++++++++||++||+||+|||+
T Consensus 69 ~ev~~~~~~~~~~a~~~~~~-g-~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~p-~~~~~~~~~ALaaGN~vVlKps~ 144 (406)
T cd07079 69 ERIEAMAEGLRQVAALPDPV-G-EVLRGWTLPNGLQIEKVRVPLGVIGIIYES-RP-NVTVDAAALCLKSGNAVILRGGS 144 (406)
T ss_pred HHHHHHHHHHHHHHhcCCCC-c-ccccceeccCccceeEEecceEEEEEecCC-Cc-chHHHHHHHHHHhCCEEEEeCCc
Confidence 47778888888887664321 1 111110000123467899999999999996 56 67899999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCC-h-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCC
Q 012790 87 NASWSGCFYFRIIQAALAAVGAPENLVDVITGF-A-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162 (456)
Q Consensus 87 ~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~-~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgG 162 (456)
.+|.++.++++++.++|.++|+|+|++|+|+|+ . +.++.|.+ ++|+|+||||+++|++|+++| ++|+++||||
T Consensus 145 ~tp~~~~~l~~~~~~~l~~aG~P~gvv~~v~g~~~~~~~~~l~~~~~v~~i~fTGS~~~G~~i~~~a---~~pv~lELGG 221 (406)
T cd07079 145 EALHSNRALVEIIQEALEEAGLPEDAVQLIPDTDREAVQELLKLDDYIDLIIPRGGAGLIRFVVENA---TIPVIKHGDG 221 (406)
T ss_pred hhhhHHHHHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHcCCCCccEEEeCCCHHHHHHHHHhc---CCCEEeecCC
Confidence 999999999999999999999999999999985 4 45676776 699999999999999999877 6999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHH
Q 012790 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 242 (456)
Q Consensus 163 k~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~ 242 (456)
|||+||++|||++.|++.+++++|.|+| .|++++|||||+++||+|+++|++++++
T Consensus 222 k~p~IV~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~si~d~f~~~l~~~~~~----------------------- 277 (406)
T cd07079 222 NCHVYVDESADLEMAVRIVVNAKTQRPS-VCNALETLLVHRDIAEEFLPKLAEALRE----------------------- 277 (406)
T ss_pred cceEEEeCCCCHHHHHHHHHHcccCCCc-ccccceeEEEeHHHHHHHHHHHHHHHHH-----------------------
Confidence 9999999999999999999999999999 9999999999999999999999997765
Q ss_pred HHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCc
Q 012790 243 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 322 (456)
Q Consensus 243 ~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL 322 (456)
.|++++.|+.. ..|++|| +++||++++||+||||++|++|+|+||||+++|+++|||
T Consensus 278 -----------~ga~~~~g~~~--------~~~~~pt----v~~d~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL 334 (406)
T cd07079 278 -----------AGVELRGDEET--------LAILPGA----KPATEEDWGTEYLDLILAVKVVDSLDEAIAHINRYGSGH 334 (406)
T ss_pred -----------CCCEEecCHHH--------HHhcccc----cCCCcchhhhhhhCceeEEEEeCCHHHHHHHHHHhCCcc
Confidence 25665433220 1377888 789999999999999999999999999999999999999
Q ss_pred eeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCC----CCcchHHHHhccceeeEEEE
Q 012790 323 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGF----GRFAGVEGLRACCLVKSVVE 390 (456)
Q Consensus 323 ~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~----G~~~g~~gl~~ft~~k~v~~ 390 (456)
++||||+|.+.++++++++++|.|+||+..... ..+||||.++||+ |+++|++|+++||+.|++..
T Consensus 335 sa~ift~d~~~a~~~~~~~~~G~v~iN~~~~~~--~~~pfg~~~~sG~~~~~g~~~g~~~l~~~~~~k~i~~ 404 (406)
T cd07079 335 TEAIVTENYETAERFLREVDSAAVYVNASTRFT--DGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVR 404 (406)
T ss_pred ccEeeeCCHHHHHHHHHhCCeeEEEEeCCCccc--CCCccccceeeeeecCCCcCCCCcChHHhcEEEEEEe
Confidence 999999999999999999999999999875432 3479999999998 99999999999999999865
|
Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1). |
| >cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-69 Score=555.54 Aligned_cols=328 Identities=18% Similarity=0.246 Sum_probs=283.2
Q ss_pred ccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh
Q 012790 41 KKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA 120 (456)
Q Consensus 41 ~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~ 120 (456)
...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++|.++|+|+|++|+|+|.+
T Consensus 87 ~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~~l~~aG~P~gvv~~v~g~~ 166 (439)
T cd07081 87 GGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAGAPENLIGWIDNPS 166 (439)
T ss_pred CceEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHHHHHHHHHHcCCChhhEEEEcCCC
Confidence 34589999999999999999999999999999999999999999999999999999999999999999999999999854
Q ss_pred -HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCC
Q 012790 121 -ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAE 197 (456)
Q Consensus 121 -~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~ 197 (456)
+.++.|++ ++|+|.||||++ |++.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++.+
T Consensus 167 ~~~g~~L~~~~~V~~V~FTGs~~----v~~~aa~~~k~~~lElGGk~p~IV~~dADl~~Aa~~iv~~~~~~~GQ~C~a~~ 242 (439)
T cd07081 167 IELAQRLMKFPGIGLLLATGGPA----VVKAAYSSGKPAIGVGAGNTPVVIDETADIKRAVQSIVKSKTFDNGVICASEQ 242 (439)
T ss_pred HHHHHHHHcCCCCCEEEEECCHH----HHHHHHhcCCCEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 78899997 899999999997 57788889999999999999999999999999999999999999999999999
Q ss_pred eEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccc
Q 012790 198 RFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFP 277 (456)
Q Consensus 198 ~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~ 277 (456)
|+|||+++||+|+++|.+++ ||+++.++++++.++|+++.++|++++.|+... . ....|+|++
T Consensus 243 rv~V~~~i~d~f~~~l~~~~---------------gpli~~~~~~~v~~~i~~a~~~Ga~~~gg~~~~-~-~~~~G~~~~ 305 (439)
T cd07081 243 SVIVVDSVYDEVMRLFEGQG---------------AYKLTAEELQQVQPVILKNGDVNRDIVGQDAYK-I-AAAAGLKVP 305 (439)
T ss_pred EEEEcHHHHHHHHHHHHHcC---------------CccCCHHHHHHHHHHHHhcCCcCCcccCCCHHH-H-HHHcCCccC
Confidence 99999999999999998853 889999999999999999999999775443200 0 012588999
Q ss_pred ce---eeecCC--CCCccchhccccCceeEeeeCCHHHHHHHHhcC----CCCceeEEecCC---HHHHHHHHHhcccCC
Q 012790 278 PT---VIVNVN--HTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDS----RYGLGCAVFSGS---QHRAREIAAQIQCGV 345 (456)
Q Consensus 278 Pt---vl~~v~--~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~----~~gL~~~vft~d---~~~~~~~~~~l~~G~ 345 (456)
|| ++.+++ ++|++++||+||||++|++|+|+||||+++|++ +|||+++|||+| .++++++++++++|.
T Consensus 306 pt~~~i~~~~~~~~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~n~~~~GLsa~V~T~d~~~~~~a~~~a~~l~~G~ 385 (439)
T cd07081 306 QETRILIGEVTSLAEHEPFAHEKLSPVLAMYRAANFADADAKALALKLEGGCGHTSAMYSDNIKAIENMNQFANAMKTSR 385 (439)
T ss_pred CCceEEEEecCCCCCCchhhhCccCceEEEEEcCCHHHHHHHHHHHhhccCCCceEEEECCCcchHHHHHHHHhhCCceE
Confidence 98 999988 999999999999999999999999999999965 799999999999 999999999999999
Q ss_pred eeecCCcccc-cCcCCCccCCCCC--CCCCcchHH-----HHhccceeeEEE
Q 012790 346 AAINDFASNY-MCQSLPFGGVKDS--GFGRFAGVE-----GLRACCLVKSVV 389 (456)
Q Consensus 346 v~iN~~~~~~-~~~~~PfGG~~~S--G~G~~~g~~-----gl~~ft~~k~v~ 389 (456)
|+||+..... ....--|||...+ |.|..+|.. +.++|++.|.+.
T Consensus 386 V~iN~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (439)
T cd07081 386 FVKNGPCSQGGLGDLYNFRGWPSMTLGCGTWGGNSVSENVGPKHLVNLKTVA 437 (439)
T ss_pred EEEeCCccccccccccCCCCCeeEeeecCCCCCCCcCCCCChHhhheeeeee
Confidence 9999753211 1112345555443 333333322 345666666553
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. |
| >PRK00197 proA gamma-glutamyl phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-68 Score=553.82 Aligned_cols=329 Identities=21% Similarity=0.232 Sum_probs=282.9
Q ss_pred HHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecCC
Q 012790 7 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 86 (456)
Q Consensus 7 ~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~ 86 (456)
.|+..+++.++|++..++.+ +. ..+..........+++++|+|||++|+||| | .++++++++||++||+||+||||
T Consensus 75 ~ev~~~~~~~~~~a~~~~~~-g~-~~~~~~~~~~~~~~~~~~PlGVv~~I~p~p-~-~~~~~~~~~ALaaGN~vVlKPs~ 150 (417)
T PRK00197 75 ARIEGIAEGLRQVAALPDPV-GE-VLDGWTLPNGLRIGRVRVPLGVIGVIYESR-P-NVTVDAAALCLKSGNAVILRGGS 150 (417)
T ss_pred HHHHHHHHHHHHHhhcCCCc-cc-cccceecCCCceEEEEecCceEEEEEcCCC-c-hHHHHHHHHHHHhCCeEEEecCh
Confidence 57777888888887765432 11 111100011235689999999999999986 4 77899999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHcCCCCCcEEEEeC-ChH-hHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCC
Q 012790 87 NASWSGCFYFRIIQAALAAVGAPENLVDVITG-FAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162 (456)
Q Consensus 87 ~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g-~~~-~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgG 162 (456)
.+|.++.++++++.++|.++|+|+|++|+|+| +.+ .++.|.. ++|+|+||||+++|+.|++.+ ++|+++||||
T Consensus 151 ~tp~t~~~l~~l~~~~l~~aGlP~gv~~~v~g~~~~~~~~~l~~~~~v~~V~fTGS~~~g~~i~~~a---~~~~~lELGG 227 (417)
T PRK00197 151 EAIHSNRALVAVIQEALEEAGLPADAVQLVETTDRAAVGELLKLDGYVDVIIPRGGAGLIRRVVENA---TVPVIEHGDG 227 (417)
T ss_pred hhhHHHHHHHHHHHHHHHHcCcChhhEEEecCCChHHHHHHhccCCCccEEEecCCHHHHHHHHHhc---CCCEEeecCC
Confidence 99999999999999999999999999999996 444 5677774 899999999999999999876 5999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHH
Q 012790 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 242 (456)
Q Consensus 163 k~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~ 242 (456)
|||+||++|||++.|++.+++++|.|+| +|++++|+|||+++||+|+++|++++++++.+
T Consensus 228 k~p~IV~~dAdl~~Aa~~iv~~~~~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~------------------- 287 (417)
T PRK00197 228 ICHIYVDESADLDKALKIVLNAKTQRPS-VCNALETLLVHEAIAEEFLPKLAEALAEAGVE------------------- 287 (417)
T ss_pred cceEEEeCCCCHHHHHHHHHHhccCCCc-ccccceEEEEEHHHhHHHHHHHHHHHHHCCCe-------------------
Confidence 9999999999999999999999999999 99999999999999999999999999887421
Q ss_pred HHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCc
Q 012790 243 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 322 (456)
Q Consensus 243 ~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL 322 (456)
++ ||.. ..+ |+ |||+ +++|++++||+||||++|++|+|+||||+++|+++|||
T Consensus 288 ---------------~~-~~~~------~~~-~~-PTi~---~~~~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL 340 (417)
T PRK00197 288 ---------------LR-GDEA------ALA-LL-PDVV---PATEEDWDTEYLDLILAVKVVDSLDEAIAHINRYGSGH 340 (417)
T ss_pred ---------------Ee-cCHH------HHH-hh-cccc---cCCcchhhhhhhCceEEEEEeCCHHHHHHHHHhcCCCC
Confidence 22 1210 012 22 9998 46899999999999999999999999999999999999
Q ss_pred eeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCC----CcchHHHHhccceeeEEEEc
Q 012790 323 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG----RFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 323 ~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G----~~~g~~gl~~ft~~k~v~~~ 391 (456)
++||||+|.++++++++++++|.|+||+..... +..||||.+.||+| +++|++|+++||+.|++...
T Consensus 341 ~a~V~t~d~~~~~~~~~~l~~G~v~VN~~~~~~--~~~p~G~~~~sG~g~~~~~~~g~~~l~~~~~~k~v~~~ 411 (417)
T PRK00197 341 TEAIVTEDYAAAERFLNEVDSAAVYVNASTRFT--DGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVLG 411 (417)
T ss_pred ceEEEeCCHHHHHHHHHhCCeeEEEEeCCCccC--CCCccccchhheeecCCCcCCCccchHhhcEEEEEEEC
Confidence 999999999999999999999999999875432 34899999999999 99999999999999999764
|
|
| >PLN02418 delta-1-pyrroline-5-carboxylate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-65 Score=558.40 Aligned_cols=324 Identities=18% Similarity=0.204 Sum_probs=279.5
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecC
Q 012790 6 LGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 85 (456)
Q Consensus 6 ~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps 85 (456)
..|+..+++.++|+++. .+... +..+......+...++.++|+|||++|+||| |+.++ +++++||++||+||+|||
T Consensus 364 ~~ev~~~~~~~~~~a~~-~~~~g-~~~~~~~~~~~~~~~~~r~PlGVV~~I~Pwn-P~~~~-~kiapALaaGNtVVlKPs 439 (718)
T PLN02418 364 PGKIASLAASIRQLADM-EDPIG-RVLKRTEVADGLVLEKTSCPLGVLLIIFESR-PDALV-QIASLAIRSGNGLLLKGG 439 (718)
T ss_pred HHHHHHHHHHHHHHhcC-ccccC-ccccccccCCCceEEEEEEeeeEEEEEeCCC-cHHHH-HHHHHHHHhCCEEEEeCC
Confidence 45899999999999987 33332 1111000001223678999999999999999 99998 999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHcCCCCCc----EEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCccccc
Q 012790 86 ENASWSGCFYFRIIQAALAAVGAPENL----VDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLE 159 (456)
Q Consensus 86 ~~~p~~~~~l~~l~~~~l~~aGlp~g~----v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lE 159 (456)
+.+|+++..+++++.+ | +|+|+ +|+|+|+.+.++.|+. .+|+|+||||+. .+++.+++++||++||
T Consensus 440 e~tp~s~~~l~~l~~e----A-lP~gv~~~v~nvv~g~~~~g~~L~~~~~v~~V~FTGSt~---~i~~~aa~~~k~v~lE 511 (718)
T PLN02418 440 KEAARSNAILHKVITD----A-IPKTVGGKLIGLVTSRDEIPDLLKLDDVIDLVIPRGSNK---LVSQIKASTKIPVLGH 511 (718)
T ss_pred ccchHHHHHHHHHHHH----H-ccccCCcceEEEeCCcHHHHHHHhhCCCCCEEEEeCCHH---HHHHHHHhcCCCEEEe
Confidence 9999999999998764 5 77775 9999986677888887 999999999996 4566677789999999
Q ss_pred CCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHH
Q 012790 160 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLE 239 (456)
Q Consensus 160 lgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~ 239 (456)
||||||+||++|||++.|++.+++++|.| ||.|++.+|+|||+++||+ |
T Consensus 512 LGGk~p~iV~~DADld~A~~~i~~~~~~n-GQ~C~a~~RllVh~~i~d~--------------G---------------- 560 (718)
T PLN02418 512 ADGICHVYVDKSADMDMAKRIVVDAKTDY-PAACNAMETLLVHKDLVQN--------------G---------------- 560 (718)
T ss_pred CCCcceEEEeCCCCHHHHHHHHHHHhCCC-CCccccCcEEEEecccccc--------------c----------------
Confidence 99999999999999999999999999999 9999999999999999997 1
Q ss_pred HHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCC
Q 012790 240 HSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSR 319 (456)
Q Consensus 240 ~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~ 319 (456)
++.++|++|+++||++ +||... .| ++. + ++|++++||+||||++|++|+|+||||+++|+++
T Consensus 561 ---~~~~~i~~a~~~Ga~l-~Gg~~~------~g------~l~-~-~~~~i~~eE~FgPv~~i~~~~~~dEAI~~aN~s~ 622 (718)
T PLN02418 561 ---GLNDLLVALRSAGVTL-YGGPRA------SK------LLN-I-PEAQSFHHEYSSLACTVEIVDDVHAAIDHIHRHG 622 (718)
T ss_pred ---cHHHHHHHHHHCCCEE-ECCccc------cC------eeC-C-CCchhhhCCcCCeeEEEEEECCHHHHHHHHhcCC
Confidence 3588999999999999 687631 13 233 3 7899999999999999999999999999999999
Q ss_pred CCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCC--CCcc--hHHHHhccceeeEEEEcc
Q 012790 320 YGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGF--GRFA--GVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 320 ~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~--G~~~--g~~gl~~ft~~k~v~~~~ 392 (456)
|||++||||+|.+++.++++++++|.|+||++.... ...||||+|+||+ |++| |++||++||+.|+|+...
T Consensus 623 yGLsa~V~T~d~~~a~~~a~~l~aG~V~IN~~~~~~--~~~PfGG~k~SG~stGr~~~~G~~gl~~~t~~K~v~~g~ 697 (718)
T PLN02418 623 SAHTDCIVTEDSEVAEIFLRQVDSAAVFHNASTRFS--DGARFGLGAEVGISTGRIHARGPVGVEGLLTTRWILRGN 697 (718)
T ss_pred CCCeeEEEcCCHHHHHHHHHhCCeeEEEEeCCCCCC--CCCCCCCcccccccCCcCCCCCHHHHHHHhcEEEEEECC
Confidence 999999999999999999999999999999875432 3479999999999 9886 999999999999998764
|
|
| >PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-65 Score=572.33 Aligned_cols=331 Identities=18% Similarity=0.221 Sum_probs=296.7
Q ss_pred ccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCC-
Q 012790 41 KKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF- 119 (456)
Q Consensus 41 ~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~- 119 (456)
...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++.++++++.++|.++|+|+|++|+|+|.
T Consensus 100 ~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~~l~~~~l~~aG~p~g~v~vv~g~~ 179 (862)
T PRK13805 100 FGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAAKIVLDAAVAAGAPKDIIQWIEEPS 179 (862)
T ss_pred CCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHHHHHHHHHHHcCcCcccEEEecCCC
Confidence 3567899999999999999999999999999999999999999999999999999999999999999999999999984
Q ss_pred hHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCC
Q 012790 120 AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAE 197 (456)
Q Consensus 120 ~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~ 197 (456)
.+.++.|++ ++|+|+||||+.++ ++++++++|+++|+|||||+||++|||++.|++.|++|+|.|+||+|+|++
T Consensus 180 ~~~~~~L~~~~~vd~I~fTGs~~v~----~~a~~~~~pv~~e~gGk~p~iV~~dADl~~Aa~~i~~~k~~n~GQ~C~a~~ 255 (862)
T PRK13805 180 VELTNALMNHPGIALILATGGPGMV----KAAYSSGKPALGVGAGNVPAYIDKTADIKRAVNDILLSKTFDNGMICASEQ 255 (862)
T ss_pred HHHHHHHHcCCCccEEEecCCHHHH----HHHHhcCCCeEEECCCCCeEEEeCCCCHHHHHHHHHHhhhccCCCccCCCc
Confidence 578899997 69999999999864 566788999999999999999999999999999999999999999999999
Q ss_pred eEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCeE-eecCCCCCCCCCCCCccc
Q 012790 198 RFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEI-LARGSFGHLSEGAVDQYF 276 (456)
Q Consensus 198 ~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v-~~gG~~~~~~~~~~g~~~ 276 (456)
|||||++++|+|+++|+++ .+|+++++++++++++++++.+.|++. +.||..... ....|.++
T Consensus 256 ~v~V~~~i~d~f~~~l~~~---------------g~~l~~~~~~~~v~~~i~~a~~~~~~~~~~g~~~~~~-~~~~G~~~ 319 (862)
T PRK13805 256 AVIVDDEIYDEVKEEFASH---------------GAYFLNKKELKKLEKFIFGKENGALNADIVGQSAYKI-AEMAGFKV 319 (862)
T ss_pred eEEEehhhHHHHHHHHHHh---------------CCeeCCHHHHHHHHHHHhhccCCCcCccccCCCHHHH-HHHcCCCC
Confidence 9999999999999998885 158999999999999999886655532 446541100 01247889
Q ss_pred ccee------eecCCCCCccchhccccCceeEeeeCCHHHHHHHHhc----CCCCceeEEecCCHHHHHHHHHhcccCCe
Q 012790 277 PPTV------IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAND----SRYGLGCAVFSGSQHRAREIAAQIQCGVA 346 (456)
Q Consensus 277 ~Ptv------l~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~----~~~gL~~~vft~d~~~~~~~~~~l~~G~v 346 (456)
+||+ +.+++++|++++ |+||||++|++|+|+||||+++|+ +++||+++|||+|.+.++++++++++|.|
T Consensus 320 ~p~~~~~i~~l~~v~~~~~~~~-E~fgPVl~v~~~~~~deAi~~~n~~~~~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v 398 (862)
T PRK13805 320 PEDTKILIAEVKGVGESEPLSH-EKLSPVLAMYKAKDFEDAVEKAEKLVEFGGLGHTAVIYTNDDELIKEFGLRMKACRI 398 (862)
T ss_pred CCCCeEEEEecCCCCCCCcchh-cccCcEEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHhhCCccEE
Confidence 9997 778999999887 799999999999999999999988 47999999999999999999999999999
Q ss_pred eecCCcc--------cccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEccc
Q 012790 347 AINDFAS--------NYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRW 393 (456)
Q Consensus 347 ~iN~~~~--------~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~~ 393 (456)
+||.... ....+.+|||| |.||+|++||+.|+++|++.|+|..++.
T Consensus 399 ~vN~~~~~~~~~~~~~~~~~~~~fG~-G~~g~~~~~g~~g~~~~~~~k~v~~~~~ 452 (862)
T PRK13805 399 LVNTPSSQGGIGDLYNKLAPSLTLGC-GSWGGNSVSENVGAKHLLNIKTVAKRRE 452 (862)
T ss_pred EEeCCccccccccccCCcCccccccc-cCCCCCcCCCCCCHHHhheeeeeeeccc
Confidence 9998631 13467799997 9999999999999999999999998764
|
|
| >cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-65 Score=528.31 Aligned_cols=299 Identities=19% Similarity=0.242 Sum_probs=268.6
Q ss_pred ccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCC-
Q 012790 41 KKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF- 119 (456)
Q Consensus 41 ~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~- 119 (456)
...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.++++++.++|.++|+|+|++|+|+|.
T Consensus 87 ~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~~l~eaG~P~g~v~~v~g~~ 166 (436)
T cd07122 87 KGIVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAGAPEGLIQWIEEPS 166 (436)
T ss_pred CCeEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHHHHHHHHHcCCCchhEEEecCCC
Confidence 3568899999999999999999999999999999999999999999999999999999999999999999999999985
Q ss_pred hHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCC
Q 012790 120 AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAE 197 (456)
Q Consensus 120 ~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~ 197 (456)
.+.+..|++ ++|+|+||||++++ +.++++++|+++|+|||||+||++|||++.|++.+++|+|.|+||.|++++
T Consensus 167 ~~~~~~l~~~~~v~~v~ftGs~~v~----~~a~~~~~~~~~elgG~~p~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~ 242 (436)
T cd07122 167 IELTQELMKHPDVDLILATGGPGMV----KAAYSSGKPAIGVGPGNVPAYIDETADIKRAVKDIILSKTFDNGTICASEQ 242 (436)
T ss_pred hHHHHHHHcCCCcCEEEEcCCHHHH----HHHHhcCCCEEEecCCCCeEEEcCCCCHHHHHHHHHHHhhccCCCCCCCCC
Confidence 477888987 89999999999975 456778999999999999999999999999999999999999999999999
Q ss_pred eEEEehhhHHHHHHHHHHHHhcc-------ccCCC-CCCCCccccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCC
Q 012790 198 RFYVHRDIYALFVSQVAKIVKSV-------SAGPP-LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSE 269 (456)
Q Consensus 198 ~v~V~~~i~d~f~~~l~~~~~~~-------~~g~~-~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~ 269 (456)
|||||+++||+|+++|+++...+ ++|++ .+.++++||+++..+.+++.+++..+..+|++++.||
T Consensus 243 rv~V~~~i~d~f~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~ga~vl~~~------- 315 (436)
T cd07122 243 SVIVDDEIYDEVRAELKRRGAYFLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAELAGIEVPEDTKVLVAE------- 315 (436)
T ss_pred EEEEechhHHHHHHHHHHhcceecCHHHHHHHHHHhhcCCCCcCccccCcCHHHHHHHcCCCCCCCCeEEEEe-------
Confidence 99999999999999999998877 77887 3667789999999888888777766666666666544
Q ss_pred CCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcC----CCCceeEEecCCHHHHHHHHHhcccCC
Q 012790 270 GAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDS----RYGLGCAVFSGSQHRAREIAAQIQCGV 345 (456)
Q Consensus 270 ~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~----~~gL~~~vft~d~~~~~~~~~~l~~G~ 345 (456)
+++++++|+++ +|.||||++|++|+|+||||+++|++ +|||++||||+|.++++++++++++|.
T Consensus 316 -----------~~~v~~~~~~~-~E~FGPVl~v~~~~~~~eAi~~aN~~~~~~~~GLsa~V~T~d~~~a~~~~~~l~aG~ 383 (436)
T cd07122 316 -----------ETGVGPEEPLS-REKLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAVIHSNDEEVIEEFALRMPVSR 383 (436)
T ss_pred -----------cCCCCCCCcch-hcccCCeEEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHhhCCceE
Confidence 35788899988 56799999999999999999999997 799999999999999999999999999
Q ss_pred eeecCCcccccCcCCCccCCCCCCC
Q 012790 346 AAINDFASNYMCQSLPFGGVKDSGF 370 (456)
Q Consensus 346 v~iN~~~~~~~~~~~PfGG~~~SG~ 370 (456)
|+||+... |||+|.+|.
T Consensus 384 V~IN~~~~--------~~~~g~~~~ 400 (436)
T cd07122 384 ILVNTPSS--------LGGIGDTYN 400 (436)
T ss_pred EEEeCCcc--------ccccCccCC
Confidence 99997532 555555544
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. |
| >TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-65 Score=533.53 Aligned_cols=326 Identities=18% Similarity=0.162 Sum_probs=293.8
Q ss_pred ccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCC-
Q 012790 41 KKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF- 119 (456)
Q Consensus 41 ~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~- 119 (456)
...+..++|+|||++|+|||||+.++.+++++||++||+||+|||+.+|.++..+++++.++|.++|+|+|++|+|+|.
T Consensus 96 ~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~~l~~~l~eaGlP~gvv~~v~g~~ 175 (488)
T TIGR02518 96 KKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKAAEEAGAPEGAIGCITVPT 175 (488)
T ss_pred cceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHHHHHHHHHHcCcCcccEEEEcCCC
Confidence 4567899999999999999999999999999999999999999999999999999999999999999999999999985
Q ss_pred hHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCC
Q 012790 120 AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAE 197 (456)
Q Consensus 120 ~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~ 197 (456)
.+.+++|++ ++|+|.||||+.++ +.++++++|+++|+|||+|+||++|||++.|++.+++|+|.|+||.|+|.+
T Consensus 176 ~e~~~~L~~~~~vd~V~fTGs~~v~----~~a~~~~~pv~~e~gGn~p~iV~~dADld~Aa~~iv~sk~~~~Gq~C~a~~ 251 (488)
T TIGR02518 176 IEGTNELMKNKDTSLILATGGEAMV----KAAYSSGTPAIGVGPGNGPAYIERTANVKKAVRDIIDSKTFDNGTICASEQ 251 (488)
T ss_pred HHHHHHHHhCCCcCEEEEeCCHHHH----HHHHHcCCCEEEEcCCCCeEEEeCCCCHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 478899997 89999999999965 444567899999999999999999999999999999999999999999999
Q ss_pred eEEEehhhHHHHHHHHHHH-------HhccccCCC-CCCCCccccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCC
Q 012790 198 RFYVHRDIYALFVSQVAKI-------VKSVSAGPP-LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSE 269 (456)
Q Consensus 198 ~v~V~~~i~d~f~~~l~~~-------~~~~~~g~~-~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~ 269 (456)
|||||+++||+|+++|+++ .+.+++|+| .++++++||+++.++++++.+++++++.+|+++++||..
T Consensus 252 rllV~~~i~d~f~~~L~~~g~~~~~~~~~~~vg~~~~~~~~~~gp~i~~~~~~~i~~~i~~av~~gakll~gg~~----- 326 (488)
T TIGR02518 252 SIIVEECNKDAVVEELKKQGGYFLTAEEAEKLGKFILRPNGTMNPQIVGKSPQVIANLAGLTVPEDAKVLIGEQN----- 326 (488)
T ss_pred EEEEeHHHHHHHHHHHHHhhhhhcCHHHHHhhcccccCCCCCcCcccccchHHHHHHHhccccCCCCEEEEeCCC-----
Confidence 9999999999999999998 889999996 578889999999999999999999999999999999861
Q ss_pred CCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhc----CCCCceeEEecCCHHHHHHHHHhcccCC
Q 012790 270 GAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAND----SRYGLGCAVFSGSQHRAREIAAQIQCGV 345 (456)
Q Consensus 270 ~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~----~~~gL~~~vft~d~~~~~~~~~~l~~G~ 345 (456)
++++++++ ++|+||||++|++|+|+||||+++|+ .+|||+++|||+|.++++++++++++|.
T Consensus 327 -------------~v~~~~~~-~~E~fgPVl~v~~~~~~dEAI~~an~~i~~~~~Glta~I~T~d~~~a~~f~~~i~ag~ 392 (488)
T TIGR02518 327 -------------GVGNKNPY-SREKLTTILAFYTEENWHEACELSIELLQNEGAGHTLIIHSENKDIVREFALKKPVSR 392 (488)
T ss_pred -------------CCCCCCcc-ccCccCceEEEEEeCCHHHHHHHHHHhhhcCCCCCeEEEEeCCHHHHHHHHHhCCeeE
Confidence 25677776 79999999999999999999999988 6899999999999999999999999999
Q ss_pred eeecCCcc--------cc-cCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEcc
Q 012790 346 AAINDFAS--------NY-MCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 346 v~iN~~~~--------~~-~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~ 392 (456)
|+||++.. .+ ....+.||+++.++.. | +-|++++++.|.|...-
T Consensus 393 V~VN~~~~~~~~Ga~t~~~~~~~~G~G~~~g~st~--~-~v~~~~l~~~k~v~~~~ 445 (488)
T TIGR02518 393 MLVNTGGSLGGIGATTNLVPAFTLGCGAVGGSSTS--D-NITPENLINIRRVAYGV 445 (488)
T ss_pred EEEcCCCcccccccccCCCccccccccccCCCcCC--C-CCCHHHhheeeEEEecc
Confidence 99996421 11 1122347777777766 3 88899999999987643
|
|
| >cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-63 Score=514.32 Aligned_cols=323 Identities=15% Similarity=0.139 Sum_probs=284.9
Q ss_pred HHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecCC
Q 012790 7 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 86 (456)
Q Consensus 7 ~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~ 86 (456)
.|+..+++.+++++....+.... ..+. ....+++++|+|||++|+|||||+. +++++++||++||+||+|||+
T Consensus 64 ~ev~~~~~~~~~~a~~~~~~~~~-~~~~-----~~~~~~~~~P~Gvv~~i~p~N~P~~-~~~~~~~aL~aGN~vilKps~ 136 (397)
T cd07077 64 SKLYKNIDTERGITASVGHIQDV-LLPD-----NGETYVRAFPIGVTMHILPSTNPLS-GITSALRGIATRNQCIFRPHP 136 (397)
T ss_pred HHHHHHHHHHHHHHHhcCcccce-EecC-----CCceEEEEecceEEEEEeCCCCchH-HHHHHHHHHHcCCcEEEEcCc
Confidence 37888888888888765443221 1111 2356899999999999999999999 999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCCc
Q 012790 87 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK 163 (456)
Q Consensus 87 ~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgGk 163 (456)
.+|+++.++++++.+++ ++|+|++++++++|++ +.+..|++ ++|+|+||||+++++.+++.+. ++|+++|+||+
T Consensus 137 ~~p~~~~~l~~~~~~~~-~~g~p~~~v~~v~~~~~~~~~~l~~~~~vd~v~ftGs~~~~~~v~~~~~--~~~~~~~~gg~ 213 (397)
T cd07077 137 SAPFTNRALALLFQAAD-AAHGPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDAAVKHSP--HIPVIGFGAGN 213 (397)
T ss_pred chhhHHHHHHHHHHHHh-hcCCCCceEEEecCCCHHHHHHHHcCCCCCEEEecCCHHHHHHHHHcCC--CCceEEecCCc
Confidence 99999999999998764 5799999999999754 77888887 7999999999999999988884 79999999999
Q ss_pred ceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHHH
Q 012790 164 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEK 243 (456)
Q Consensus 164 ~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~ 243 (456)
||+||++|||++.|++.+++++|.| ||.|+++++||||+++||+|+++|.+++++
T Consensus 214 ~~~iv~~dad~~~a~~~~~~~~~~~-GQ~C~a~~~v~V~~~i~d~~~~~l~~~~~~------------------------ 268 (397)
T cd07077 214 SPVVVDETADEERASGSVHDSKFFD-QNACASEQNLYVVDDVLDPLYEEFKLKLVV------------------------ 268 (397)
T ss_pred ceEEEcCCCCHHHHHHHHHHhhccC-CccCCCCeEEEEehhhhHHHHHHHHHHHHh------------------------
Confidence 9999999999999999999999999 999999999999999999999999998754
Q ss_pred HHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHH----HHHHHHhcCC
Q 012790 244 LQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDE----EVVKLANDSR 319 (456)
Q Consensus 244 v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~----eai~~~n~~~ 319 (456)
+|++++.||. +.|+.|| ++|++++||+||||++|++|+|+| +|++++|+++
T Consensus 269 ----------~G~~~~~g~~---------~~~~~pt------~~~~~~~~E~FgPvl~v~~~~~~~eai~~ai~~~n~~~ 323 (397)
T cd07077 269 ----------EGLKVPQETK---------PLSKETT------PSFDDEALESMTPLECQFRVLDVISAVENAWMIIESGG 323 (397)
T ss_pred ----------cCcCcCCCce---------eeEEecc------CCCChhhhhhhCceeEEEEEcchHHHHHHHHHHHHhcC
Confidence 4677776654 3577776 789999999999999999999996 6667889999
Q ss_pred CCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCC--CCCCCCcch-HHHHhccceeeEEE
Q 012790 320 YGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVK--DSGFGRFAG-VEGLRACCLVKSVV 389 (456)
Q Consensus 320 ~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~--~SG~G~~~g-~~gl~~ft~~k~v~ 389 (456)
|||++||||+|.++++++++++++|.|+||+...+.....+||||.+ .||+|+++| .+|+++|++.|+|+
T Consensus 324 ~gl~~~Ift~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~~~~gg~~~~~SG~g~~~g~~~~~~~~~~~k~v~ 396 (397)
T cd07077 324 GPHTRCVYTHKINKVDDFVQYIDTASFYPNESSKKGRGAFAGKGVERIVTSGMNNIFGAGVGHDALRPLKRLV 396 (397)
T ss_pred CCCceEEEeCCHHHHHHHHHhCCEEEEEEeCCccCCCccccCCCcceEEEccccCCCCCCCChHHhcceeEee
Confidence 99999999999999999999999999999998665433458999999 899999999 99999999999985
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. |
| >TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-63 Score=540.77 Aligned_cols=295 Identities=17% Similarity=0.196 Sum_probs=254.6
Q ss_pred ceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHh
Q 012790 43 AKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET 122 (456)
Q Consensus 43 ~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~ 122 (456)
.+++++|+|||++|+||| |+.+ ++++++||++||+||+|||+.+|+++.++++++.++| ..|.+++++++|+|..+.
T Consensus 391 ~~~~~~P~GVV~~I~PwN-P~~~-~~~~~~ALaaGN~vvlKpse~tp~t~~~l~~l~~~al-p~g~~~~~~~~v~~~~~~ 467 (715)
T TIGR01092 391 LEKTSVPIGVLLIVFESR-PDAL-VQIASLAIRSGNGLLLKGGKEAARSNAILHKVITEAI-PIHVGKKLIGLVTSREEI 467 (715)
T ss_pred eEEEEeeceEEEEEeCCC-hHHH-HHHHHHHHHhCCEEEEcCcccchHHHHHHHHHHHHHc-CCCCCCcEEEEeCChHHH
Confidence 568999999999999999 9998 6899999999999999999999999999999987652 223334478999864466
Q ss_pred HHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEE
Q 012790 123 GEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFY 200 (456)
Q Consensus 123 ~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~ 200 (456)
++.|.. ++|+|+||||+++|+.|+++|+ +|+++|||||||+||++|||++.|++.++.++|. +||+|+|++|||
T Consensus 468 ~~~l~~~~~vd~I~fTGS~~vG~~i~~~A~---~pv~lElgGk~p~iV~~dADl~~A~~~i~~~~~~-~GQ~C~a~~rvl 543 (715)
T TIGR01092 468 PDLLKLDDVIDLVIPRGSNKLVSQIKKSTK---IPVLGHADGICHVYVDKSASVDMAKRIVRDAKCD-YPAACNAMETLL 543 (715)
T ss_pred HHHHhcCCCccEEEEcCCHHHHHHHHHhCC---CCEEEEcCCcceEEECCCCCHHHHHHHHHHHhCC-CCCccccCcEEE
Confidence 777776 8999999999999999999875 9999999999999999999999998666666655 599999999999
Q ss_pred EehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccccee
Q 012790 201 VHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTV 280 (456)
Q Consensus 201 V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptv 280 (456)
||++++|+ | .+.++++++.++|++++ ||... . .|+.
T Consensus 544 V~~~i~d~-------------------------~--------~~~~~v~~~~~~Ga~l~-Gg~~~------~-~~~~--- 579 (715)
T TIGR01092 544 VHKDLLRN-------------------------G--------LLDDLIDMLRTEGVTIH-GGPRF------A-AYLT--- 579 (715)
T ss_pred Eehhhccc-------------------------h--------hHHHHHHHHHHCCCEEE-CCcch------h-heec---
Confidence 99999985 0 25677888888999985 77521 1 2332
Q ss_pred eecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCC
Q 012790 281 IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSL 360 (456)
Q Consensus 281 l~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~ 360 (456)
..+++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||+.... ...+
T Consensus 580 --~~~~~~~i~~eE~FGPvl~v~~~~~~deAi~~~N~~~~gLa~~ift~d~~~a~~~~~~i~sG~V~vN~~~~~--~~~~ 655 (715)
T TIGR01092 580 --FNISETKSFRTEYSSLACTVEIVDDVYDAIDHIHKHGSAHTDCIVTEDENVAEFFLQHVDSAAVFHNASTRF--SDGF 655 (715)
T ss_pred --cCCCCchhhhccccCceEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEeCCCCC--CCCC
Confidence 135789999999999999999999999999999999999999999999999999999999999999986432 2358
Q ss_pred CccCCCCCCCCC----cchHHHHhccceeeEEEEcc
Q 012790 361 PFGGVKDSGFGR----FAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 361 PfGG~~~SG~G~----~~g~~gl~~ft~~k~v~~~~ 392 (456)
||||+++||+|+ ++|++++++||+.|+|....
T Consensus 656 pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~g~ 691 (715)
T TIGR01092 656 RFGLGAEVGISTSRIHARGPVGVEGLLTTRWLLRGK 691 (715)
T ss_pred CCcCccccccccCCCCCCChhHHHHhceEEEEEECC
Confidence 999999999995 48999999999999998754
|
This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region. |
| >TIGR00407 proA gamma-glutamyl phosphate reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-62 Score=500.19 Aligned_cols=329 Identities=17% Similarity=0.176 Sum_probs=273.0
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++.++.+ . +..+......+...+++++|+|||++|+||| | .++++++++||++||+||+||
T Consensus 61 a~~ev~~~~~~~~~~a~~a~~~-g-~~~~~~~~~~~~~~~~~~~PlGVV~~I~pw~-p-~~~~~~~~~ALaaGN~vVlKp 136 (398)
T TIGR00407 61 TEGRLKGIADGVKDVIELADPV-G-KVIDGRELDSGLTLERVRVPLGVLGVIYEAR-P-NVTVDIASLCLKTGNAVILRG 136 (398)
T ss_pred CHHHHHHHHHHHHHHhcCCCCC-c-ccccceecCCCceEEEEEeCcEEEEEEeCCC-c-hHHHHHHHHHHHhCCeEEECC
Confidence 3568999999999999888653 2 2222100012345688999999999999997 6 678899999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCC-h-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-A-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 160 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~-~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lEl 160 (456)
|+.+|+++..++++++++|.++|+|+|++|+|+|. . +.++.|.. ++|+|+||||+++|+.+++. ..+|+++|+
T Consensus 137 s~~tp~~~~~l~~~~~~al~eaGlP~gvv~~v~g~~~~~~~~~l~~~~~v~~v~fTGs~~vg~~~~~~---~~~~~~~e~ 213 (398)
T TIGR00407 137 GKEAVRSNKALVEVIQDALAQTGLPVGAVQLIETPSRELVSELLDLDEYIDLLIPRGGNGLVRLIKQT---STIPVLGHG 213 (398)
T ss_pred ChhhHHHHHHHHHHHHHHHHHcCCChhHEEEecCCCHHHHHHHHhCCCCeeEEEecCCHHHHHHHHHh---CCCCEEEec
Confidence 99999999999999999999999999999999984 4 46777876 89999999999999988875 358999999
Q ss_pred CCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHH
Q 012790 161 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 240 (456)
Q Consensus 161 gGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~ 240 (456)
|||||+||++|||++.|++.+++|+|.+ ||+|++++|+|||+++||+|+++|+++++++.+ .+ +.
T Consensus 214 gGk~p~iV~~dADl~~Aa~~iv~~~~~~-GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~--------~~----~~-- 278 (398)
T TIGR00407 214 DGICHIYLDESADLIKAIKVIVNAKTQR-PSTCNAIETLLVNKAIAREFLPVLENQLLEKGV--------TI----HA-- 278 (398)
T ss_pred CCcceEEEeCCCCHHHHHHHHHhhhcCC-CCcccccceEEEeHHHHHHHHHHHHHHHHhcCC--------EE----ec--
Confidence 9999999999999999999999999965 999999999999999999999999999987642 11 11
Q ss_pred HHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCC
Q 012790 241 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRY 320 (456)
Q Consensus 241 ~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~ 320 (456)
.+.+++++. +|. ||++ + .+|++++||+||||++|++|+|+||||+++|+++|
T Consensus 279 ~~~i~~~v~-----------~g~--------------~tv~-~--~~~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~~~ 330 (398)
T TIGR00407 279 DAYALKLLE-----------LGP--------------ATEA-I--VCKTDFDKEFLSLDLSVKIVESLEAAIQHINQYGT 330 (398)
T ss_pred CHHHHHHHh-----------ccC--------------cccc-c--cccccccchhhCceeEEEEECCHHHHHHHHHHhCC
Confidence 133443432 121 3544 3 33789999999999999999999999999999999
Q ss_pred CceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCC-----CCCCCcchHHHHhccceee
Q 012790 321 GLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKD-----SGFGRFAGVEGLRACCLVK 386 (456)
Q Consensus 321 gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~-----SG~G~~~g~~gl~~ft~~k 386 (456)
||++||||+|.++++++++++++|.|+||++.... ...||| .+. ++-...+|+-+++.||..|
T Consensus 331 GL~a~I~t~d~~~a~~~a~~i~~G~v~iN~~~~~~--~~~pfG-~~~~~~~~~~~~~~rg~~~~~~~~~~~ 398 (398)
T TIGR00407 331 QHSDAILTENKANAEQFQNGVDSAAVYHNASTRFT--DGFRFG-FGAEVGISTQKLHARGPMGLEALTSYK 398 (398)
T ss_pred CCceEEEeCCHHHHHHHHHhCCeeEEEEeCCCCcC--CCcccc-cceeeEEecCCCcCCCCcCHHHhcCCC
Confidence 99999999999999999999999999999975432 347887 332 2345677999999988754
|
The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif. |
| >cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-61 Score=491.17 Aligned_cols=315 Identities=39% Similarity=0.636 Sum_probs=288.1
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEE
Q 012790 3 DASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVI 82 (456)
Q Consensus 3 ~~~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~Vvl 82 (456)
+.+..|+..+++.++|+++.++++.+..... ...+...+++++|+|||++|+|||||+...++.+++||++||+||+
T Consensus 49 ~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vil 125 (367)
T cd06534 49 EEALGEVARAIDTFRYAAGLADKLGGPELPS---PDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVL 125 (367)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCcccc---cCCCceeEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEE
Confidence 4456799999999999999998876532211 1124567899999999999999999999999999999999999999
Q ss_pred ecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCccccc
Q 012790 83 KVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLE 159 (456)
Q Consensus 83 Kps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lE 159 (456)
|||+.+|.++..+.+++. ++|+|++++++++|+. +.++.|+. ++|.|.||||+++++.|.+.++++++|+++|
T Consensus 126 k~s~~~~~~~~~l~~~l~----~ag~p~~~v~~~~~~~~~~~~~l~~~~~vd~v~~tGs~~~~~~v~~~~~~~~~~~~~e 201 (367)
T cd06534 126 KPSELTPLTALALAELLQ----EAGLPPGVVNVVPGGGDEVGAALLSHPRVDKISFTGSTAVGKAIMKAAAENLKPVTLE 201 (367)
T ss_pred ECCCcchHHHHHHHHHHH----hcCCCcCeEEEEEcCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhcCCCeEEEE
Confidence 999999999988887754 6899999999999976 47888887 8899999999999999999999999999999
Q ss_pred CCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHH
Q 012790 160 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLE 239 (456)
Q Consensus 160 lgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~ 239 (456)
+||+||+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|+
T Consensus 202 ~~g~~~~iV~~~ad~~~aa~~i~~~~~~~~gq~C~s~~~v~v~~~~~~~f~~~l~------------------------- 256 (367)
T cd06534 202 LGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTAASRLLVHESIYDEFVEKLV------------------------- 256 (367)
T ss_pred cCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHhhc-------------------------
Confidence 9999999999999999999999999999999999999999999999999999887
Q ss_pred HHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCC
Q 012790 240 HSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSR 319 (456)
Q Consensus 240 ~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~ 319 (456)
||+.++++++++++||+||||++|++|++++||++++|+++
T Consensus 257 ---------------------------------------tl~~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~~~n~~~ 297 (367)
T cd06534 257 ---------------------------------------TVLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTE 297 (367)
T ss_pred ---------------------------------------eeeeCCCCCCccccCCccCceEEEEecCCHHHHHHHHhCCC
Confidence 56667788899999999999999999999999999999999
Q ss_pred CCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEE
Q 012790 320 YGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389 (456)
Q Consensus 320 ~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~ 389 (456)
+||++||||+|...++++++++++|.|+||+..... .+.+||||.++||+|+++|++++++||+.|++.
T Consensus 298 ~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~-~~~~pfgg~~~sG~g~~~g~~~~~~~~~~k~i~ 366 (367)
T cd06534 298 YGLTAGVFTRDLNRALRVAERLRAGTVYINDSSIGV-GPEAPFGGVKNSGIGREGGPYGLEEYTRTKTVV 366 (367)
T ss_pred CCCeEEEECCCHHHHHHHHHhCCcceEEECCCCCCC-CCCCCCCCcccCccCCCChHHHHHHhceEEEEe
Confidence 999999999999999999999999999999987654 456899999999999999999999999999874
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri |
| >KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-60 Score=467.56 Aligned_cols=352 Identities=29% Similarity=0.486 Sum_probs=312.3
Q ss_pred HHHHHHHHHHHHHHhhhhhhCCcccCCC-cccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecCC
Q 012790 8 EIMTTCEKITWLLSEGEKWLKPEYRSSG-RSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 86 (456)
Q Consensus 8 Ei~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~ 86 (456)
-+.-.++.+||++..+++... +..|-+ ......-...+++|+|||++|.|||||+.++.|+.+++|++- ++|
T Consensus 522 hvgmsi~~~ryfagwcdkiqg-~tipi~~arpn~nl~lt~~epigv~g~i~pwnyplmmlswk~aaclaa~---~~k--- 594 (881)
T KOG2452|consen 522 HVGMSIQTFRYFAGWCDKIQG-STIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMMLSWKTAACLAAQ---VLK--- 594 (881)
T ss_pred hcCceehHHHHhhhhhhhccC-ceeccccCCCCCcceeeecCcceeEEEeccCCchHHHHHHHHHHHHHHH---Hhh---
Confidence 344568899999999988643 222321 111112357899999999999999999999999999999842 111
Q ss_pred CChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhh-ccCCcccccCCC
Q 012790 87 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNAS-KTLTPVTLELGG 162 (456)
Q Consensus 87 ~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa-~~~~pv~lElgG 162 (456)
+++ -.|++|+++|++ -+|+.|.. ++.+|-||||+++|+.||+.|+ ++.|+|+|||||
T Consensus 595 --------~~e-----------~sgvini~~gsgslvg~rls~hpdvrkigftgsteig~~im~sca~snikkvslelgg 655 (881)
T KOG2452|consen 595 --------FAE-----------LTGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCAISNVKKVSLELGG 655 (881)
T ss_pred --------hhh-----------hcceEEEecCCcchhccccccCCccceeccccchHHHHHHHHHHhhcchheeeeeccC
Confidence 122 248999999987 56888887 9999999999999999999988 468999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHH
Q 012790 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 242 (456)
Q Consensus 163 k~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~ 242 (456)
++|+||+.||||+.|++....+.|+|-|.+|++..|+||..+|+|+|+.++.+..+++++|+|+|.+++.||.-...|.-
T Consensus 656 ~sp~iifad~dl~kav~~~~~~vff~kgenciaagr~fi~~sihd~fv~~~vee~~~~~ig~pldr~t~hgpqnh~ahl~ 735 (881)
T KOG2452|consen 656 ESPFIIFADCDLNKAVQMGMSSVFFSKGENCIAAGRLFVEDSIHDEFVRRVVEEVRKMKVGNPLDRDTDHGPQNHHAHLV 735 (881)
T ss_pred CCceEEEecCcHHHHHHhhccceeecCCcchhhhcceeehhhhhHHHHHHHHHHHHhhccCCcccccccCCchhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeC--CHHHHHHHHhcCCC
Q 012790 243 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN--TDEEVVKLANDSRY 320 (456)
Q Consensus 243 ~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~--~~~eai~~~n~~~~ 320 (456)
++.++++.+++.||++.+||.++ .+.|+|++|||+++++.+|-+..||-||||+.|.+|+ |+|++++.+|++++
T Consensus 736 kl~ey~~~~v~~ga~~~~gg~~~----~r~g~~f~pti~s~i~d~~f~a~eesfgpim~is~f~d~d~~~vl~ran~tef 811 (881)
T KOG2452|consen 736 KLMEYCQHGVKEGATLVCGGNQV----PRPGFFFEPTVFTDVEDHMFIAKEESFGPVMIISRFADGDLDAVLSRANATEF 811 (881)
T ss_pred HHHHHHHHHhccCcEEEECCccC----CCCCcccCCeeecccchhhhhhhccccCceEEEEecCCCCHHHHHhhcccccc
Confidence 99999999999999999999975 4679999999999999999999999999999999996 58999999999999
Q ss_pred CceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEc
Q 012790 321 GLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 321 gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~ 391 (456)
||++.|||+|...+.++++.+++|+|+||.+.-.. -..||||+++||+|+..|.+.|.+|...|+|+..
T Consensus 812 gla~gvftrd~~k~l~v~~~l~agtvfvnty~ktd--vaapfggfkqsgfgkd~ge~alneyl~~ktit~e 880 (881)
T KOG2452|consen 812 GLASGVFTRDINKALYVSDKLQAGTVFVNTYNKTD--VAAPFGGFKQSGFGKDLGEAALNEYLRVKTVTFE 880 (881)
T ss_pred ccccceeecccchhhhhhhhhccceEEEeeccccc--cccCCCCccccccccchhHHHHhhheeeEEEEee
Confidence 99999999999999999999999999999874322 2479999999999999999999999999998753
|
|
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-59 Score=470.57 Aligned_cols=359 Identities=22% Similarity=0.392 Sum_probs=319.5
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEe
Q 012790 4 ASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIK 83 (456)
Q Consensus 4 ~~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlK 83 (456)
.+..||..+++++|||+..++.-+.. ..++|+|.|.+|+|||||+......++.||++||+|+-|
T Consensus 206 naIAEVREAVDFlrYYA~~ar~~~g~---------------~~~~~~G~vVcISPWNFPLAIFtGqiaAAL~aGN~VlAK 270 (769)
T COG4230 206 NAIAEVREAVDFLRYYAGQARDTFGN---------------LTHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAK 270 (769)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcccCc---------------cccCCCCcEEEECCCCchHHHHHhHHHHHHHcCCccccC
Confidence 46789999999999999998752110 347899999999999999999999999999999999999
Q ss_pred cCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChH-hHHHHHh--ccCEEEecCCHHHHHHHHHHhhc-c--CCccc
Q 012790 84 VSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASK-T--LTPVT 157 (456)
Q Consensus 84 ps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~-~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~-~--~~pv~ 157 (456)
|.|+||+.+..-.+++ .|||+|++++|+++|+++ +|..|+. +++.|+|||||++++.|.++.++ + ..|.+
T Consensus 271 PAEqTpLIAa~aV~ll----~eAGvP~~~lqLLpG~G~tvGa~L~~darv~GV~FTGSTevA~li~~~LA~r~g~~~pLI 346 (769)
T COG4230 271 PAEQTPLIAAQAVRLL----HEAGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQGRPIPLI 346 (769)
T ss_pred ccccccHHHHHHHHHH----HHcCCChhhHHhcCCCCcccchhhhcCcccceEEEeCcHHHHHHHHHHHhhcCCCCCceE
Confidence 9999999988777775 479999999999999985 7999998 99999999999999999988776 3 47889
Q ss_pred ccCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccC
Q 012790 158 LELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCL 237 (456)
Q Consensus 158 lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~ 237 (456)
.|.||.|.+||+.+|--|.++..++.|+|..+||+|.+...+++++++.|..+++|+-++.++++|+|..-.+|+||+|+
T Consensus 347 AETGGqNAMIVDSsAL~EQVv~Dvl~SAFdSAGQRCSALRvLclQ~DvAd~~l~mLKGAm~el~~G~p~~l~tDVGPVId 426 (769)
T COG4230 347 AETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQEDVADRILTMLKGAMAELRVGNPDRLTTDVGPVID 426 (769)
T ss_pred eccCCcceEEeechhhHHHHHHHHHHHHhhcccchhhhhhhhhhhhhHHHHHHHHHHHHHHHhccCCccceecccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCC-CCCccccceeeecCCCCCccchhccccCceeEeeeC--CHHHHHHH
Q 012790 238 LEHSEKLQNLVNDALDKGAEILARGSFGHLSEG-AVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN--TDEEVVKL 314 (456)
Q Consensus 238 ~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~-~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~--~~~eai~~ 314 (456)
.++-+.++++|+..+..|-.+..-.. +.. ..|.|+.||++.-- +-.-++.|+|||||.|++|+ ++++.|+.
T Consensus 427 aEAk~~i~~Hi~~mr~~gr~v~q~~~----~~~~q~GtFv~Ptl~El~--~~~eL~rEVFGPVLHVvRy~~~~l~~vi~~ 500 (769)
T COG4230 427 AEAKANIEKHIQTMRSKGRLVHQAAA----PNSLQKGTFVAPTLIELE--NLDELQREVFGPVLHVVRYKRDELDEVIDQ 500 (769)
T ss_pred HHHHHHHHHHHHHHHhcccchhhccC----CCccCCceeeCceeEEcC--CHHHHHHHhccceeEEEEecHHHHHHHHHH
Confidence 99999999999998877644322111 111 46999999999632 33447899999999999995 79999999
Q ss_pred HhcCCCCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCC-CcchHHHHhccceeeE
Q 012790 315 ANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKS 387 (456)
Q Consensus 315 ~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G-~~~g~~gl~~ft~~k~ 387 (456)
+|.+.|||+..|+|+-.+.+.++.+++++|++|||.-+......-.||||.|-||.| +.+|+..|..|...+.
T Consensus 501 INatGyGLT~GvHtRideti~~v~~~~~aGNlYVNRN~vGAVVGVQPFGG~GLSGTGPKAGGp~YL~Rl~~~~p 574 (769)
T COG4230 501 INATGYGLTLGVHTRIDETIAHVTERAHAGNLYVNRNIVGAVVGVQPFGGEGLSGTGPKAGGPLYLLRLVSERP 574 (769)
T ss_pred HhccCcceeeeeecchHHHHHHHHhhccccceEeeccceeeEEeeccCCCCCCCCCCCCCCChHHHHHHHhcCC
Confidence 999999999999999999999999999999999998655554556799999999999 7899999999987665
|
|
| >KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-59 Score=453.96 Aligned_cols=381 Identities=22% Similarity=0.361 Sum_probs=333.6
Q ss_pred HHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecc-eEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecCCCCh
Q 012790 11 TTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPL-GVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENAS 89 (456)
Q Consensus 11 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p 89 (456)
..++.+|+.++.+.+...-+.... ..+..+..+++|+ |.|..|+||||--...--..+|||+ ||+|+||||..+.
T Consensus 161 eLidf~R~na~ya~eL~~~qpi~~---~~~t~ns~~yRpleGFVaAisPFnftAI~gnLa~aPaLM-GN~VLwkPS~ta~ 236 (561)
T KOG2455|consen 161 ELIDFFRFNAKYASELYAQQPISQ---TKGTWNSMEYRPLEGFVAAISPFNFTAIGGNLAGAPALM-GNVVLWKPSDTAA 236 (561)
T ss_pred HHHHHHHHhHHHHHHhhhcCCccc---cCCCCcceeeccccceeEEecccceeeeccccccChhhh-cceeeecccchhH
Confidence 566777777777776654443221 1345677899999 9999999999997766667788887 9999999999999
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccC------CcccccC
Q 012790 90 WSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTL------TPVTLEL 160 (456)
Q Consensus 90 ~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~------~pv~lEl 160 (456)
+++.++.++++ |||+|+|++|+|++++ ..++.++. ++..+.||||+.+-+.+.+..++++ -+++.|+
T Consensus 237 lssYii~~il~----EAGlP~GvinFvPad~~~f~dtita~~hfaglnftgS~~~fk~lwk~V~~n~~~Y~~fPrlvgEc 312 (561)
T KOG2455|consen 237 LSSYIIYRILR----EAGLPPGVINFVPADGPLFGDTITASPHFAGLNFTGSVPTFKHLWKKVGENVDNYRTFPRLVGEC 312 (561)
T ss_pred HHHHHHHHHHH----HcCCCccceeeccCCCCeecceeccCcccceeeeecccHHHHHHHHHHHhhhhhhhcchhhhccC
Confidence 99999888765 7999999999999997 66888876 9999999999999999998888765 5789999
Q ss_pred CCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCC-CCCCCccccccCHH
Q 012790 161 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP-LAGKYDMGALCLLE 239 (456)
Q Consensus 161 gGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~~gpli~~~ 239 (456)
||||--+|.++||++.++...++++|..+||.|.|.+|+||++++++.+.++|.+..+++++||| .+.++.+|++|..+
T Consensus 313 gGkNFHfVH~SA~VesvV~~TvrsAfey~GQkcsA~SRmYvp~s~wp~i~e~l~~~~~q~~igd~~~d~~~f~gavIh~~ 392 (561)
T KOG2455|consen 313 GGKNFHFVHASADVESVVSSTVRSAFEYQGQKCSACSRMYVPESLWPQIREELVEEHSQLKIGDPVIDFSTFIGAVIHDK 392 (561)
T ss_pred CCcceEEeccccchHHHHHHHHHHHHhhcccccchhhhcccchhhcHHHHHHHHHHHhhcccCCccccccchhhhhccHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998 78899999999999
Q ss_pred HHHHHHHHHHHHHhc-CCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCC--HHHHHHHH-
Q 012790 240 HSEKLQNLVNDALDK-GAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNT--DEEVVKLA- 315 (456)
Q Consensus 240 ~~~~v~~~i~~a~~~-Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~--~~eai~~~- 315 (456)
.++|++++|+.|++. ..++++||+- ++..|+|++|||+..-+|.+++|.||+|||||+|+.|+| ++|+++++
T Consensus 393 sF~rl~k~le~ak~~~~leiL~GGk~----DdS~G~FV~PTiv~~kdP~~pim~ee~fGPvLsVyvY~Dd~~~E~l~lv~ 468 (561)
T KOG2455|consen 393 SFARLKKVLEHAKKDPELEILAGGKC----DDSTGYFVEPTIVLSKDPKDPIMTEEIFGPVLSVYVYEDDKFDEVLKLVD 468 (561)
T ss_pred HHHHHHHHHHhhccCccceeeecCcc----cCCCCeeecceEEEccCCCcchhhhhccCceeEEEEeccccHHHHHHHHh
Confidence 999999999999753 4789999984 467899999999999999999999999999999999964 89999998
Q ss_pred hcCCCCceeEEecCCHHHHHHHHHhcc--cCCeeecCCcccccCcCCCccCCCCCCCC-CcchHHHHhccceeeEEEEcc
Q 012790 316 NDSRYGLGCAVFSGSQHRAREIAAQIQ--CGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 316 n~~~~gL~~~vft~d~~~~~~~~~~l~--~G~v~iN~~~~~~~~~~~PfGG~~~SG~G-~~~g~~gl~~ft~~k~v~~~~ 392 (456)
|.++|||+.+||++|.+.+.+..++++ +|+.+|||..+.......||||.+.||.. +.+|++-+..||.++++-..
T Consensus 469 ~tt~YaLTGaiFaqd~~vv~~a~~~Lr~aAgNfYiNdKcTGsvvgqqpFGGaR~SGTNDKaGgp~~l~RwtSp~~ikEt- 547 (561)
T KOG2455|consen 469 NTTPYALTGAIFAQDREVVLHALDVLRMAAGNFYINDKCTGSVVGQQPFGGARLSGTNDKAGGPHYLLRWTSPLSIKET- 547 (561)
T ss_pred cCCcceeccccccccHHHHHHHHHHHHhhhcceEEccccccceeeccccCcccccCCCCCCCCceEEEeecCcchhhhc-
Confidence 668999999999999999999999886 89999999766665566899999999986 78899999999999886442
Q ss_pred cccccccCCCCCCCCCCC
Q 012790 393 WWPYIKTKIPKPIQYPVA 410 (456)
Q Consensus 393 ~~~~~~~~~~~~~~~p~~ 410 (456)
+ ..+.++.||++
T Consensus 548 ~------~~l~d~~yp~~ 559 (561)
T KOG2455|consen 548 F------VPLTDVKYPSM 559 (561)
T ss_pred c------cCCcccCcCCC
Confidence 2 23455778864
|
|
| >KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-55 Score=415.11 Aligned_cols=379 Identities=24% Similarity=0.385 Sum_probs=339.2
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
..+|+...++.++|....-+.. .....|... .+.--.-.+.|+|+|++|+.+|||...--|+-..|+.+||+|+|||
T Consensus 112 gvgevqeyvdicdyavglsr~l-~g~i~pser--pghalleqwnplg~vgvitafnfpcavygwnnaiaMv~gncVvWKp 188 (507)
T KOG2453|consen 112 GVGEVQEYVDICDYAVGLSRSL-EGKIFPSER--PGHALLEQWNPLGVVGVITAFNFPCAVYGWNNAIAMVCGNCVVWKP 188 (507)
T ss_pred cchhHHHHHHHHHHhhhhhhhh-CCcccCCCC--CchhHHHhcCCcceEEEEEeccCCceeeccCchhhhhhcceeEecC
Confidence 4578998999888887765443 222222211 1112235689999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgG 162 (456)
.+.+|+++....+++.+.|.+--+|.+......|..+.++++.+ ++..+.||||+.+|+.+.+..-.+.-+..|||||
T Consensus 189 ApttpLtTiAvtklIaevL~qnnl~~aicsltcG~aDigrAaakdgRvnlvsftGssQvgKsvgq~vqarfgk~llelgg 268 (507)
T KOG2453|consen 189 APTTPLTTIAVTKLIAEVLEQNNLPGAICSLTCGGADIGRAAAKDGRVNLVSFTGSSQVGKSVGQQVQARFGKLLLELGG 268 (507)
T ss_pred CCCcceeHHHHHHHHHHHHhccCCCcceeeecccchhhhhhccccCceeecccccchhhhhHHHHHHHHHhhhHHHhhcC
Confidence 99999999999999999999999999999999998899999987 9999999999999999998888778889999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHH
Q 012790 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 242 (456)
Q Consensus 163 k~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~ 242 (456)
+|+.||.+||||..++...++++...+||+|+...|++||+++||+.+++|+.+.+++++|.|+|+++-+||+-++++..
T Consensus 269 nnaiiv~edadl~lvvps~lfaavgtagqrctt~rrl~~hesvyd~vlerlkkayaq~~ignpld~ntl~gplht~qav~ 348 (507)
T KOG2453|consen 269 NNAIIVNEDADLNLVVPSTLFAAVGTAGQRCTTTRRLIVHESVYDQVLERLKKAYAQFEIGNPLDSNTLIGPLHTQQAVG 348 (507)
T ss_pred CceEEEeccccceeeehHHHHHHhcccccchhhhhHHHhhHHHHHHHHHHHHHHHHheecCCcCCCCceeccccCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCc
Q 012790 243 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 322 (456)
Q Consensus 243 ~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL 322 (456)
..+.-++++++.|.++++||+.. +++|+|++|||++ ...|.++..+|.|.|||.|.+|.+++||+.+-|+.+.||
T Consensus 349 ~f~~~veeak~~ggki~yggkv~----er~gnfveptivt-l~hda~vv~~etfapilyvlkf~~~eea~ainnev~qgl 423 (507)
T KOG2453|consen 349 KFKASVEEAKASGGKIEYGGKVL----ERDGNFVEPTIVT-LKHDAPVVLRETFAPILYVLKFSTLEEAIAINNEVDQGL 423 (507)
T ss_pred HHHHHHHHHHhcCCeEEECCEee----ccCCCcccceEEE-ecCCcchhhhhhccceeeEEeccchhhhheecccccccc
Confidence 99999999999999999999964 5789999999998 899999999999999999999999999999999999999
Q ss_pred eeEEecCCHHHHHHHHHh--cccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEcc
Q 012790 323 GCAVFSGSQHRAREIAAQ--IQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 323 ~~~vft~d~~~~~~~~~~--l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~ 392 (456)
++||||.|...+-+...- -++|.|.||-+.... ...-.|||-|..|-||+.|.+..++|.+..+-+++.
T Consensus 424 sssift~n~~nifrw~gpkgsdcgivnvniptsga-eiggafggek~tgggresgsdswkqymrrstctiny 494 (507)
T KOG2453|consen 424 SSSIFTTNIQNIFRWMGPKGSDCGIVNVNIPTSGA-EIGGAFGGEKETGGGRESGSDSWKQYMRRSTCTINY 494 (507)
T ss_pred chhhhhcCHHHHHhhhCCCCCccceEEecCCCCch-hhcccccCccccCCCcccCchHHHHHHhhceeeeec
Confidence 999999999998888764 478999999754333 334689999999999999999999998876665554
|
|
| >cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=292.67 Aligned_cols=272 Identities=15% Similarity=0.191 Sum_probs=208.6
Q ss_pred cccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHHHHHcCCCC----CcEEE
Q 012790 40 HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE----NLVDV 115 (456)
Q Consensus 40 ~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~l~~~~l~~aGlp~----g~v~v 115 (456)
+...+++++|+|||++|+|||||+ +.+++++.||++||++|+|||+.+|.++.++.+++.+ + +|+ +.+++
T Consensus 103 ~~~~~~~~~P~Gvv~~I~p~N~P~-l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~~~l~~----~-~p~~~~~~~~~v 176 (422)
T cd07080 103 GRGGYIRAQPRGLVVHIIAGNVPL-LPVWSIVRGLLVKNVNLLKMSSSDPLTATALLRSLAD----V-DPNHPLTDSISV 176 (422)
T ss_pred CCCCeeEEcCCceEEEEccCCccc-cHHHHHHHHHHhcCceEEECCCccchHHHHHHHHHHh----c-CCCCcccceEEE
Confidence 356689999999999999999999 7999999999999999999999999999999888765 4 677 88888
Q ss_pred E--eCCh-HhHHHHHh-ccCEEEecCCHHHHHHHHHHhhccCCcccccCCCc-ceEEEcCCC----CHHHHHHHHHHHHh
Q 012790 116 I--TGFA-ETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK-DAFIVCDDV----DVPHVAQIAVRAAL 186 (456)
Q Consensus 116 v--~g~~-~~~~~L~~-~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgGk-~p~iV~~da----Dl~~aa~~i~~~~~ 186 (456)
+ +|++ +.++.|++ . |+|+||||+++++.|++.++++ +.++|+||| +++|+++++ |++.+++.++++++
T Consensus 177 v~~~g~~~~~~~~l~~~~-D~i~~~Gs~~~~~~i~~~a~~~--~~~Le~Ggk~s~~vi~~~a~~~~dl~~aa~~~a~~~~ 253 (422)
T cd07080 177 VYWPGGDAELEERILASA-DAVVAWGGEEAVKAIRSLLPPG--CRLIDFGPKYSFAVIDREALESEKLAEVADALAEDIC 253 (422)
T ss_pred EEecCCchHHHHHHHHhC-CEEEEeCCHHHHHHHHHhCCCC--CeeeecCCceeEEEecHHhhccccHHHHHHHHHHHHH
Confidence 8 4655 47888888 6 9999999999999999999865 569999999 556666668 99999999999999
Q ss_pred hCCCCCcccCCeEEEehhh---HHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCeEeecCC
Q 012790 187 QSSGQNCAGAERFYVHRDI---YALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS 263 (456)
Q Consensus 187 ~n~GQ~C~a~~~v~V~~~i---~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~ 263 (456)
.|+||.|+|+++||||+++ +++|.++|.++++++....|.. ++ +.....++...-..+...+.+....+
T Consensus 254 ~~~gQ~C~sp~~v~V~~~~~~~~~~f~~~l~~~l~~~~~~~p~~------~~-~~~~~~~~~~~r~~~~~~~~~~~~~~- 325 (422)
T cd07080 254 RYDQQACSSPQVVFVEKDDDEELREFAEALAAALERLPRRYPAL------SL-SAAESAKIARARLEAEFYELKGGVSR- 325 (422)
T ss_pred HHhhhhccCCeEEEEECCCCchHHHHHHHHHHHHHHHHHhCCCC------CC-CHHHHHHHHHHHHHHHHHHHhcCCCC-
Confidence 9999999999999999999 9999999999999875333321 11 33333333333222222222111100
Q ss_pred CCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCceeEEecCCHHHHHHHHHhccc
Q 012790 264 FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQC 343 (456)
Q Consensus 264 ~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~ 343 (456)
.. .-||+.+-.++ +. ....+=.+.|.++++++|++..++. +=-|+++|..+.+. .++++++..
T Consensus 326 -------~~----~~~v~~~~~~~--~~-~~~~~r~v~v~~v~~l~~~l~~~~~--~lQTvg~~~~~~~~-~~~~~~l~~ 388 (422)
T cd07080 326 -------DL----GWTVIISDEIG--LE-ASPLNRTVNVKPVASLDDVLRPVTP--YLQTVGLAPSPAEL-AELADALAA 388 (422)
T ss_pred -------CC----CeEEEEeCCCC--cc-CCCCcCEEEEEEcchHHHHHHhhhh--hcceeEeecChhhH-HHHHHHHHH
Confidence 01 23455433322 21 1455568889999999999999985 55699999988777 778887764
Q ss_pred CC
Q 012790 344 GV 345 (456)
Q Consensus 344 G~ 345 (456)
.+
T Consensus 389 ~G 390 (422)
T cd07080 389 AG 390 (422)
T ss_pred cC
Confidence 33
|
Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN. |
| >COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-30 Score=254.50 Aligned_cols=302 Identities=22% Similarity=0.260 Sum_probs=252.0
Q ss_pred cccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 012790 40 HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 119 (456)
Q Consensus 40 ~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~ 119 (456)
+.+.+.++.|+||+++| |......+.....-+|.+||+||+|.+..+.++...+.+++++.|.++|+|++.||+|+-.
T Consensus 105 GL~i~~~rvPLGVigvI--YEsRPnVtvdaaaLclKsGNAvILRGGsea~~Sn~ai~~~i~~aL~~~~lP~~aVqli~~~ 182 (417)
T COG0014 105 GLQIYRVRVPLGVIGVI--YESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNAAIVEVIQEALEKAGLPADAVQLIEDT 182 (417)
T ss_pred CCEEEEEEccceEEEEE--EecCCccHHHHHHHHHhcCCEEEEeCcHHHhhhHHHHHHHHHHHHHHcCCCHHHhhhccCC
Confidence 45678899999999999 9999999999999999999999999999999999999999999999999999999999974
Q ss_pred -hHhHHHHHh---ccCEEEecCCHHHHHHHHHHhhccCCcccccCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCccc
Q 012790 120 -AETGEALVS---SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAG 195 (456)
Q Consensus 120 -~~~~~~L~~---~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a 195 (456)
.+....|++ .+|.|.-.||....+.|.+.+. .||+-..-|+|-++|+++||+|.|.+-++.++....+- |++
T Consensus 183 ~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~~a~---vPVi~~~~G~CHiyvd~~ADld~A~~ii~nAKtqrPs~-CNA 258 (417)
T COG0014 183 DREEVLELLRLDGYIDLVIPRGGAGLIRRVVENAT---VPVIEHGVGNCHIYVDESADLDKALKIIVNAKTQRPSV-CNA 258 (417)
T ss_pred CHHHHHHHHhhcCceeEEEcCCcHHHHHHHHhCCc---CCEEecCcceEEEEecccCCHHHHHHHHHcccCCCCcc-cch
Confidence 466666665 8999999999999999988887 88888888999999999999999999999999998876 999
Q ss_pred CCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcc
Q 012790 196 AERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQY 275 (456)
Q Consensus 196 ~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~ 275 (456)
.+.++||+.+.++|+..|.+.+.+. |.++.+... ..-
T Consensus 259 ~EtLLVh~~ia~~fLp~l~~~l~~~----------------------------------gvelr~d~~---------~~~ 295 (417)
T COG0014 259 AETLLVHRAIAKSFLPKLANALQEA----------------------------------GVELRGDAE---------ALA 295 (417)
T ss_pred HHHHHcCHHHHHHhHHHHHHHHHhc----------------------------------CeEEEcCHH---------HHH
Confidence 9999999999999999999888642 212211100 000
Q ss_pred ccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCceeEEecCCHHHHHHHHHhcccCCeeecCCcccc
Q 012790 276 FPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY 355 (456)
Q Consensus 276 ~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~ 355 (456)
+-|..- .+....=+..|...++|.|..++++||||+.+|....+++-+|.|+|.+.+++|.+++++..|+||....+.
T Consensus 296 ~~~~~~--~~A~e~Dw~tEyLd~ilavkvVd~ld~AI~HIn~y~S~HsdaIiTe~~~~a~~F~~~VDSAaVyvNASTRFt 373 (417)
T COG0014 296 LLPDAV--KPATEEDWDTEYLDLILAVKVVDSLDEAIAHINTYGSGHSDAIITEDYANAERFVNEVDSAAVYVNASTRFT 373 (417)
T ss_pred hccccC--CCCchhhHHHHhhhheeEEEEeCCHHHHHHHHHHhCCCCCcceeeCCHHHHHHHHhhcchheEEEecccccc
Confidence 000000 111222367899999999999999999999999999999999999999999999999999999999987766
Q ss_pred cCcCCCccCC-CC-CCCCCcchHHHHhccceeeEEEEcc
Q 012790 356 MCQSLPFGGV-KD-SGFGRFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 356 ~~~~~PfGG~-~~-SG~G~~~g~~gl~~ft~~k~v~~~~ 392 (456)
..+.+.||.. |- +.-.+.+|+-||+++|..|.++...
T Consensus 374 DG~~fG~GaEiGISTqKlHARGPmGLe~LTs~Kyiv~G~ 412 (417)
T COG0014 374 DGGQFGLGAEIGISTQKLHARGPMGLEALTSYKYIVRGD 412 (417)
T ss_pred cCccccCceEEEeecCcccCCCCCChhhhcceeEEEeCC
Confidence 6555666653 21 2334667999999999999988654
|
|
| >KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.6e-21 Score=181.42 Aligned_cols=296 Identities=19% Similarity=0.234 Sum_probs=232.9
Q ss_pred cceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChH
Q 012790 42 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAE 121 (456)
Q Consensus 42 ~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~ 121 (456)
.-+-.-.|+||.++| |....-....-..-|++.||.+++|....+..+...+.++++++|.+.|.|.+.+++|+...|
T Consensus 104 ~L~qvt~PiGvLLVI--FESRPd~l~qiasLAi~SgN~llLKGGkEa~~Sn~~L~~~v~~al~~~~~~~~aV~LV~sREe 181 (433)
T KOG4165|consen 104 ELEQVTVPIGVLLVI--FESRPDCLPQIASLAIASGNGLLLKGGKEAAHSNAALHKLVQEALGTHGGPGKAVQLVTSREE 181 (433)
T ss_pred eEEEeeccceEEEEE--eccCchHHHHHHHHHHhcCCeEeecCchhhhhhHHHHHHHHHHHhhhccCchhhhhheecHHH
Confidence 345667899999999 888777777777789999999999999999999999999999999999999999999987555
Q ss_pred hHHHHH-h-ccCEEEecCCHHHHHHHHHHhhccCCcccccCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeE
Q 012790 122 TGEALV-S-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERF 199 (456)
Q Consensus 122 ~~~~L~-~-~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v 199 (456)
+.+.|- + .+|.|.-.||+...|.|.+..- +||...-.|.+.++|++|||++.|.+-+..++..+.. .|+|.+.+
T Consensus 182 v~dLl~ld~~IDLvIPRGSs~LVr~Ik~~tk---IPVLGHA~GichvYvd~dad~~kA~riv~DaK~dYPA-aCNAmETL 257 (433)
T KOG4165|consen 182 VSDLLKLDDYIDLVIPRGSSDLVRSIKDTTK---IPVLGHAEGICHVYVDKDADLDKAKRIVRDAKCDYPA-ACNAMETL 257 (433)
T ss_pred HHHHhhhhhheeEEecCCcHHHHHHHhhccc---CcccccccceeEEEeccccCHHHHHHHHhcccCCCch-hhhhHHHH
Confidence 554442 2 8999999999999999877665 8999999999999999999999999888788877664 49999999
Q ss_pred EEehhh-HHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccc
Q 012790 200 YVHRDI-YALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPP 278 (456)
Q Consensus 200 ~V~~~i-~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~P 278 (456)
++|++. ...|.+.|...++ .+|.++.+|-+ + ..- +
T Consensus 258 LIh~dl~~~~~~~~l~~~l~----------------------------------~~gVtl~agpk-l----~~~-----l 293 (433)
T KOG4165|consen 258 LIHKDLEQSPFFDDLINMLK----------------------------------EEGVTLHAGPK-L----AAL-----L 293 (433)
T ss_pred hccHhhhhcchHHHHHHHHH----------------------------------hcCeEEecChh-H----Hhh-----c
Confidence 999973 3344444433332 24555544322 1 000 1
Q ss_pred eeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCc
Q 012790 279 TVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQ 358 (456)
Q Consensus 279 tvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~ 358 (456)
++ -+++..-+..|.-.-.++|-.+++.++||+.+|....+++-+|.|+|.+.+++|.+.+++..|+.|....+...-
T Consensus 294 ~~---~p~e~~s~~~Ey~~l~~~ievV~~v~~Ai~HI~~hgS~HTD~IvTe~~~~Ae~Fl~~VDSa~vf~NASTRFaDGf 370 (433)
T KOG4165|consen 294 KF---SPPEAKSFNTEYGSLECTIEVVDSVQSAIDHIHTHGSSHTDCIVTENEATAEHFLKHVDSACVFHNASTRFADGF 370 (433)
T ss_pred Cc---CCchhhhhhhhhcchheeeeecccHHHHHHHHHhcCCcccceEEecCHHHHHHHHhccchhheeecccccccccc
Confidence 11 134455577888888889999999999999999999999999999999999999999999999999876554332
Q ss_pred CCCccCCCCCCC--CC--cchHHHHhccceeeEEEEcc
Q 012790 359 SLPFGGVKDSGF--GR--FAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 359 ~~PfGG~~~SG~--G~--~~g~~gl~~ft~~k~v~~~~ 392 (456)
+..+|. .-|+ +| .+|+-|++..+..|++++..
T Consensus 371 RfGlGa--EVGIST~rIHARGPvGveGLlttkw~lRG~ 406 (433)
T KOG4165|consen 371 RFGLGA--EVGISTSRIHARGPVGVEGLLTTKWLLRGK 406 (433)
T ss_pred cccccc--eeeeeccceeccCCccccceeeeeeEEecC
Confidence 333332 2333 44 45899999999999988865
|
|
| >PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins | Back alignment and domain information |
|---|
Probab=99.68 E-value=5.6e-14 Score=144.54 Aligned_cols=276 Identities=19% Similarity=0.252 Sum_probs=185.4
Q ss_pred ceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEE--eCC-
Q 012790 43 AKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVI--TGF- 119 (456)
Q Consensus 43 ~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv--~g~- 119 (456)
.+.+..|.|+++.|.|.|-|..- +..++.+|.+||..|+|+|...+.++..+.+.+.+...+.-+ ...+.++ +|.
T Consensus 81 ~~~~~~p~g~v~Hi~agNvp~~~-~~S~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~~~~~~l-~~~i~v~~~~~~d 158 (399)
T PF05893_consen 81 GYVRAFPRGLVFHIAAGNVPLVG-FYSLVRGLLSGNANIVKLSSRDPFLAPALLRSLAEIDPEHPL-ADSIAVVYWPGGD 158 (399)
T ss_pred chhhccCCceEEEEcCCCccchH-HHHHHHHHHhCCceEEECCCCchhHHHHHHHHHHhhCccchh-hhcEEEEEecCCc
Confidence 67889999999999999999865 556677888899999999999999998888887664111001 1345666 343
Q ss_pred hHhHHHHHhccCEEEecCCHHHHHHHHHHhhccCCcccccCCCc-ceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCe
Q 012790 120 AETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK-DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAER 198 (456)
Q Consensus 120 ~~~~~~L~~~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgGk-~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~ 198 (456)
.+..+.+.+..|.|+.+||.++.+.|.+.... ..-.++-|-| |-++|..+++++.+++.++.-.+...+|-|.||+.
T Consensus 159 ~~~~~~~~~~~D~vv~wGgd~ti~~ir~~~~~--~~~~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~~~dQ~aCsSp~~ 236 (399)
T PF05893_consen 159 EELEEALSQQADAVVAWGGDETIRAIRQPLPP--GARLIEFGPKYSFAVIDAEAELEEAARRLANDIFLFDQQACSSPQV 236 (399)
T ss_pred hHHHHHHHHHCCEEEEeCCHHHHHHHHHHcCC--CCcEeeeCCceEEEEEcCchhHHHHHHHHHHHHHHhhCcccCCCeE
Confidence 35556666699999999999999999884432 3344555544 55777888899999999999999999999999999
Q ss_pred EEEe---hhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHHHHHHHHH-----HHHhcCCeEeecCCCCCCCCC
Q 012790 199 FYVH---RDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVN-----DALDKGAEILARGSFGHLSEG 270 (456)
Q Consensus 199 v~V~---~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~-----~a~~~Ga~v~~gG~~~~~~~~ 270 (456)
|||. +.-.++|.++|.+++++..---|.. ..+......+....+ .+...+.++. ++.
T Consensus 237 ifv~~g~~~~~~~f~~~L~~~L~~~~~~~p~~-------~~s~~~~~~~~~~r~~~~~~~~~~~~~~~~-~~~------- 301 (399)
T PF05893_consen 237 IFVETGDGDSVEEFAERLAEALERAAERYPRG-------ELSIDEAAAISSLRAEAELRYALDGEYRVW-SSD------- 301 (399)
T ss_pred EEEECCCcccHHHHHHHHHHHHHHHHHhCCCc-------CCCHHHHHHHHHHHHHHHHHHHhcCCccee-ecC-------
Confidence 9999 3456788888877776542111110 012222222222222 2333333444 222
Q ss_pred CCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCceeEEecCCHHHHHHHHHhc-ccCC
Q 012790 271 AVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI-QCGV 345 (456)
Q Consensus 271 ~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l-~~G~ 345 (456)
.+ ..||+....+ .......+=.+.|.++++++|++.+++....=-|++++..+ ....++++.+ ..|.
T Consensus 302 -~~---~~~V~~~~~~---~~~~~pl~r~v~v~~v~~~~e~~~~l~~~~~lQTvgi~~~~-~~~~~~~~~l~~~Gv 369 (399)
T PF05893_consen 302 -DN---SWTVIVSPEP---PLLPSPLNRTVYVVPVDSLEELVPYLRPKRGLQTVGIYPWS-ERLEELARALAAAGV 369 (399)
T ss_pred -CC---CEEEEECCCc---ccccCCCCCEEEEEEcCCHHHHHHHhhhcCCCeeEEEecCh-hhHHHHHHHHHhcCC
Confidence 01 2456544322 22334445688999999999999999987541377776544 4556666644 3443
|
The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process |
| >KOG2449 consensus Methylmalonate semialdehyde dehydrogenase [Amino acid transport and metabolism; Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.7e-14 Score=122.27 Aligned_cols=133 Identities=20% Similarity=0.313 Sum_probs=112.3
Q ss_pred HHHHHHHHHHHhccccCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCC
Q 012790 207 ALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNH 286 (456)
Q Consensus 207 d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~ 286 (456)
....+.|++..+.+++-+...+++|. .+..+|+.++++.- +...|.....+...++.|..||+|. |+|
T Consensus 9 ksW~~~lve~ak~l~v~~g~kp~tD~-----~a~~~ri~~liqS~------~~~~~r~~yl~~ya~~~f~~~tiLs-vtP 76 (157)
T KOG2449|consen 9 KSWHPTLVEDAKVLKVNAGEKPQTDK-----YAPKVRIDKLIQSE------DPLDGRFIYLPGYAEGNFVGPTILS-VTP 76 (157)
T ss_pred hhhhHHHHHhhhheEeccCCCCCccc-----hhHHHHHHHHhcCc------CccCCceEEeeccccCCcccceEEE-ecC
Confidence 45667788888888887777788776 55678888888751 3333332223345789999999999 999
Q ss_pred CCccchhccccCceeEeeeCCHHHHHHHHhcCCCCceeEEecCCHHHHHHHHHhcccCCeeecCC
Q 012790 287 TMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDF 351 (456)
Q Consensus 287 ~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~ 351 (456)
+|.++.|||||||+..+.-+++||||.++|+++||-...|||.+.+.++++....++|.+.+|-.
T Consensus 77 ~ms~ykeeI~gpVlv~l~~~tldd~I~Iin~nPygn~t~i~Tsn~atark~~~e~~a~qig~~~~ 141 (157)
T KOG2449|consen 77 NMSCYKEEIFGPVLVRLETETLDDAIFIINNNPYGNGTAIFTSNGATARKFCHEPDAGQIGANVP 141 (157)
T ss_pred CcceeHhhhhcceEEEEeecCCCceeEEEecCCCCceeEEEecCcHHhhhhhcCCCccceecccc
Confidence 99999999999999999999999999999999999999999999999999999999999999975
|
|
| >PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster | Back alignment and domain information |
|---|
Probab=99.29 E-value=9.1e-11 Score=108.68 Aligned_cols=167 Identities=16% Similarity=0.202 Sum_probs=126.8
Q ss_pred ceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHHH
Q 012790 164 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEK 243 (456)
Q Consensus 164 ~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~ 243 (456)
+-+||++|.|++.|+..++.+.-..-| ..+.-.|+|||++.|+|+++++.+++.+. + .+.+...+.|
T Consensus 6 ~lMIvfe~GDlnsA~~~L~~sl~~Pf~--~~~VatVlVqEsireefi~rvr~~m~pl~------~-----~va~Hpny~r 72 (215)
T PF07368_consen 6 QLMIVFEDGDLNSAMHYLLESLHNPFA--PGAVATVLVQESIREEFIERVRSRMKPLS------P-----QVANHPNYLR 72 (215)
T ss_pred eEEEEEeCCCHHHHHHHHHHHHhCccc--CCcEEEEEEeHHHHHHHHHHHHHhCccCC------h-----hhccCcHHHH
Confidence 348999999999999999998765544 45778899999999999999999997763 1 1223344555
Q ss_pred HHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcC-CCCc
Q 012790 244 LQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDS-RYGL 322 (456)
Q Consensus 244 v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~-~~gL 322 (456)
-.+.++ .-+++++.++.. .....-.|.++.|++.. .+.+ --.+|+++..|++..||+++++.- ...-
T Consensus 73 sl~~i~---~l~~~~I~~~~~------~~~~~aSPilV~d~~h~--~fg~-~PTgViTlhtFRt~~Ea~~l~~kE~l~f~ 140 (215)
T PF07368_consen 73 SLKKIK---CLNAKTIVADFE------NVPPPASPILVCDFTHS--YFGD-GPTGVITLHTFRTPKEAIELCAKETLPFD 140 (215)
T ss_pred HHHHHH---hcCCeEEEeccc------CCCCCCCCEEEcCCCHH--HcCC-CCCeEEEEEccCCHHHHHHHHhcCCCCcc
Confidence 555554 468899888542 11223369999987653 2222 334799999999999999999864 2234
Q ss_pred eeEEecCCHHHHHHHHHhcccCCeeecCCcccc
Q 012790 323 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNY 355 (456)
Q Consensus 323 ~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~ 355 (456)
+.|||++..+.+.+++.++++..++|||.....
T Consensus 141 SVsiW~ekla~~Yel~~~l~~~~f~iNC~~V~L 173 (215)
T PF07368_consen 141 SVSIWNEKLASAYELAARLPCDTFYINCFNVDL 173 (215)
T ss_pred eEEEeCcHHHHHHHHHHhCCCCEEEEEeccCCc
Confidence 999999999999999999999999999975544
|
The function of this family is unknown. |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.24 E-value=3.5e-06 Score=97.60 Aligned_cols=102 Identities=14% Similarity=0.201 Sum_probs=77.8
Q ss_pred ccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeC
Q 012790 39 IHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITG 118 (456)
Q Consensus 39 ~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g 118 (456)
.+..+.....|.|++++|+||| ...+.++..||++||+|++||++.++. .+ +.+|..+.+.+
T Consensus 1068 TGEsN~L~l~~RG~vlcisp~~---~~~l~Qi~AALaaGn~vi~~~~~~~~~-------~~------~~Lp~~~~~~~-- 1129 (1208)
T PRK11905 1068 TGESNLLSLHPRGRVLCVADTE---EALLRQLAAALATGNVAVVAADSGLAA-------AL------ADLPGLVAARI-- 1129 (1208)
T ss_pred CCcceeEEecCCceEEEECCcH---HHHHHHHHHHHHhCCEEEEeCCcccHH-------HH------HhCcccccccc--
Confidence 3567899999999999999999 457889999999999999999998752 11 22566555444
Q ss_pred ChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccC---CcccccC
Q 012790 119 FAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTL---TPVTLEL 160 (456)
Q Consensus 119 ~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~---~pv~lEl 160 (456)
..+..+.. +++.|.||||+++.+.+.++.+++- .|++.|.
T Consensus 1130 --~~~~~~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~G~Ivpliaet 1174 (1208)
T PRK11905 1130 --DWTQDWEADDPFAGALLEGDAERARAVRQALAARPGAIVPLIAAE 1174 (1208)
T ss_pred --ccccccccCCcccEEEEeCCHHHHHHHHHHHHhCCCCcceEEecC
Confidence 22335555 7999999999999999988877653 4444444
|
|
| >PRK13770 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.083 Score=54.34 Aligned_cols=282 Identities=14% Similarity=0.136 Sum_probs=154.6
Q ss_pred HHHHHHHHHhhhhhhCCcccCCCccc-ccccceEEEecceEEEEEcCC-ccc-hHhhHHHHHHHHhcCCeEEEecCCCCh
Q 012790 13 CEKITWLLSEGEKWLKPEYRSSGRSM-IHKKAKVEFHPLGVVGAIVSW-NYP-FHNIFNPMLAAVFSGNGIVIKVSENAS 89 (456)
Q Consensus 13 ~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~vi~p~-N~P-~~~~~~~~~~ALaaGN~VvlKps~~~p 89 (456)
.+.|+...++.+++-+.+. +..+.. .+.....++.|+--|++..|. .+| +++.++..+||-.||+.=|+-.+|-..
T Consensus 74 ~~ai~~A~~nI~~fh~~q~-~~~~~~~~gv~~g~~~~Pi~rvGlYVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~ 152 (416)
T PRK13770 74 KQALQQSYERIKAYQESIK-QTNQQLEESVECYEIYHPLESVGIYVPGGKASYPSTVLMTATLAQVAGVENIVVVTPPQP 152 (416)
T ss_pred HHHHHHHHHHHHHHHHHhC-CCCeEecCCcEEEEEEeeeeeeEEEccCCCCCccHHHHHhhccHhhcCCCeEEEEeCcCC
Confidence 3444455555544433332 122211 233446789999999999996 444 345677788999999875554333211
Q ss_pred --hHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh------ccCEEEecCCHHHHHHHHHHhhccCCcccccC-
Q 012790 90 --WSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS------SVDKIIFVGSPGVGRMIMRNASKTLTPVTLEL- 160 (456)
Q Consensus 90 --~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~------~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lEl- 160 (456)
.....++ +...+|..+ +- --|+...-.+|.- +||+|+=.|..=+..+ +.... -.|-..+
T Consensus 153 ~~i~p~iL~-----Aa~~~Gv~e--Iy-~iGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~A--K~~v~--g~V~ID~~ 220 (416)
T PRK13770 153 NGVSQEVLA-----ACYITQVNQ--VF-QVGGAQSIAALTYGTETIPKVDKIVGPGNQFVAYA--KKYLF--GQVGIDQI 220 (416)
T ss_pred CCCCHHHHH-----HHHHcCCCe--ee-ccCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHH--HHHhc--CCcCcCCC
Confidence 1111122 123466654 21 1255555555542 8999998887655321 11110 1122221
Q ss_pred CCcceE--EEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEE--ehhhHHHHHHHHHHHHhccccCCCCCCCCcccccc
Q 012790 161 GGKDAF--IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYV--HRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALC 236 (456)
Q Consensus 161 gGk~p~--iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V--~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli 236 (456)
-|.|=+ |-|++||.+..+..++..+=+.. .+ +.++| .+++.++..+.+.+.++.+.
T Consensus 221 AGPSEvlViAD~~Anp~~iAaDLLaQAEHd~----~a-~~iLvT~s~~la~~V~~ev~~ql~~lp--------------- 280 (416)
T PRK13770 221 AGPTEIALIIDETADLDAIVYDVFAQAEHDE----LA-RTYVISEDAQVLKDLESRIAKALPNVD--------------- 280 (416)
T ss_pred CCCceeEEEecCCCCHHHHHHHHHHHhccCC----CC-cEEEEeCCHHHHHHHHHHHHHHHHhCC---------------
Confidence 244443 34456899988877776543332 22 33444 34555666666655555442
Q ss_pred CHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHh
Q 012790 237 LLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAN 316 (456)
Q Consensus 237 ~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n 316 (456)
+ .+.++.+.++ +| .++-++|+|||++++|
T Consensus 281 -r------~~i~~~al~~-----------------------------------------~g---~ii~v~~~eeai~~~N 309 (416)
T PRK13770 281 -R------YDIVSKSIAN-----------------------------------------QH---YLIHASNFDEACHVMN 309 (416)
T ss_pred -h------HHHHHHHHHh-----------------------------------------CC---EEEEECCHHHHHHHHH
Confidence 0 1222322211 11 2345799999999999
Q ss_pred cCCCCceeEEecCCHHHHHHHHHhcc-cCCeeecCCcccccCcCCCccCC--------CCCCCCCcchHHHHhccceeeE
Q 012790 317 DSRYGLGCAVFSGSQHRAREIAAQIQ-CGVAAINDFASNYMCQSLPFGGV--------KDSGFGRFAGVEGLRACCLVKS 387 (456)
Q Consensus 317 ~~~~gL~~~vft~d~~~~~~~~~~l~-~G~v~iN~~~~~~~~~~~PfGG~--------~~SG~G~~~g~~gl~~ft~~k~ 387 (456)
..-. =..-|.++|. +.+..+++ +|.|++..+.. .++|.+ ..+|..|+.|.-+.+.|...-+
T Consensus 310 ~~AP-EHLel~~~~~---~~~l~~i~nAGaiFlG~~sp------~a~GDY~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s 379 (416)
T PRK13770 310 TIAP-EHASIQTVNP---QPYIEKVKYVGALFIGHYSP------EVIGDYVAGPSHVLPTNRTARFTNGLSVNDFLTRNT 379 (416)
T ss_pred hhCh-HhheehhCCH---HHHHhhCCEeceeccCCCCc------hhhhccccCCCCcCCCCcceeccCCCcHHHeeccee
Confidence 8422 2456788886 45677775 89999986522 123322 2457778888888888875544
Q ss_pred E
Q 012790 388 V 388 (456)
Q Consensus 388 v 388 (456)
+
T Consensus 380 ~ 380 (416)
T PRK13770 380 V 380 (416)
T ss_pred e
Confidence 3
|
|
| >PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.034 Score=57.26 Aligned_cols=285 Identities=17% Similarity=0.191 Sum_probs=132.9
Q ss_pred HHHHHHHHHHhhhhhhCCcccCCCccc---ccccceEEEecceEEEEEcCC-ccc-hHhhHHHHHHHHhcCCeEEEecCC
Q 012790 12 TCEKITWLLSEGEKWLKPEYRSSGRSM---IHKKAKVEFHPLGVVGAIVSW-NYP-FHNIFNPMLAAVFSGNGIVIKVSE 86 (456)
Q Consensus 12 ~~~~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~P~GVv~vi~p~-N~P-~~~~~~~~~~ALaaGN~VvlKps~ 86 (456)
..+.|++.+++.+++-+.+........ .+.....++.|+--|++..|. .+| +++.++.++||-.||..=|+-.+|
T Consensus 66 ~~~Ai~~A~~~I~~fh~~q~~~~~~~~~~~~G~~~g~~~~Pi~rvG~YVPGG~a~~pStvlM~aiPA~vAGV~~Iv~~TP 145 (412)
T PF00815_consen 66 LREAIEQAAENIRAFHEAQLPKKDWEVETEPGVILGQRYRPIERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTP 145 (412)
T ss_dssp HHHHHHHHHHHHHHHHHTT-----EEEEEETTEEEEEEEEE-SEEEEE---SSS--THHHHHHHHHHHHHT-SEEEEEE-
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcEEEecCCcEEEEEEEEhhheEEEccCCCCCccHHHHHcccchhhcCCCeEEEEcC
Confidence 445566666666665544432211111 234556889999999999994 344 345677788999999865554333
Q ss_pred CCh---hHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh------ccCEEEecCCHHHHHHHHHHhhccCCccc
Q 012790 87 NAS---WSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS------SVDKIIFVGSPGVGRMIMRNASKTLTPVT 157 (456)
Q Consensus 87 ~~p---~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~------~vd~i~fTGS~~~g~~v~~~aa~~~~pv~ 157 (456)
-.+ .....|+ +...+|..+ +- .-|+...-.+|.- +||+|+=.|..=+..+=..-.. .|-
T Consensus 146 p~~~G~i~p~vL~-----Aa~~~Gv~e--vy-~vGGaqAIAAlAyGTeti~~VDkIvGPGN~yV~~AK~~v~g----~V~ 213 (412)
T PF00815_consen 146 PPKDGKINPAVLA-----AAHLAGVDE--VY-KVGGAQAIAALAYGTETIPKVDKIVGPGNAYVTAAKRLVFG----DVG 213 (412)
T ss_dssp SS------HHHHH-----HHHHTT-SE--EE-E--HHHHHHHHHH--SSS---SEEE---SHHHHHHHHHHHH----S-E
T ss_pred CCccCCCCHHHHH-----HHHHcCCCE--EE-ecccHHHHHHHHcCCCCCCceeEEECCCcHHHHHHHHHhcC----Ccc
Confidence 221 1111121 234577744 22 2254454455532 8999998888765332111111 111
Q ss_pred cc-CCCcce--EEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEeh--hhHHHHHHHHHHHHhccccCCCCCCCCcc
Q 012790 158 LE-LGGKDA--FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHR--DIYALFVSQVAKIVKSVSAGPPLAGKYDM 232 (456)
Q Consensus 158 lE-lgGk~p--~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~--~i~d~f~~~l~~~~~~~~~g~~~~~~~~~ 232 (456)
.. +-|.|= +|-|++||.+..+..++..+=+... + +.++|.. +..++..+.+.+.++.+.
T Consensus 214 ID~~AGPSEv~ViAD~~A~p~~vAaDLLaQAEHd~~----a-~~vLvt~s~~la~~V~~~v~~~l~~l~----------- 277 (412)
T PF00815_consen 214 IDMIAGPSEVLVIADETANPEFVAADLLAQAEHDPD----A-QAVLVTTSEELAEAVEAEVERQLEELP----------- 277 (412)
T ss_dssp ES------EEEEEE-TTS-HHHHHHHHHHHHTT-TT------EEEEEES-HHHHHHHHHHHHHHHTT-T-----------
T ss_pred cCCCCCCCceEEEECCCCCHHHHHHHHHHHhccCCC----C-ceEEEECCHHHHHHHHHHHHHHHHhCC-----------
Confidence 11 234444 3445679999888887766544432 2 2344443 444555555544444331
Q ss_pred ccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHH
Q 012790 233 GALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVV 312 (456)
Q Consensus 233 gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai 312 (456)
. .+.++.+.+ +| .++.++|++||+
T Consensus 278 -------r----~~i~~~sl~------------------------------------------~g---~ii~~~~l~ea~ 301 (412)
T PF00815_consen 278 -------R----REIAEKSLE------------------------------------------NG---AIIVVDSLEEAI 301 (412)
T ss_dssp -------T----HHHHHHHHT------------------------------------------T----EEEE-SSHHHHH
T ss_pred -------c----hHHHHHHHH------------------------------------------CC---eEEEECCHHHHH
Confidence 0 122222221 11 245679999999
Q ss_pred HHHhcCCCCceeEEecCCHHHHHHHHHhcc-cCCeeecCCcccc-------cCcCCCccCCCCCCCCCcchHHHHhccce
Q 012790 313 KLANDSRYGLGCAVFSGSQHRAREIAAQIQ-CGVAAINDFASNY-------MCQSLPFGGVKDSGFGRFAGVEGLRACCL 384 (456)
Q Consensus 313 ~~~n~~~~gL~~~vft~d~~~~~~~~~~l~-~G~v~iN~~~~~~-------~~~~~PfGG~~~SG~G~~~g~~gl~~ft~ 384 (456)
+++|..- +=...|.++|. +.+..+++ +|.|++..+.... .++-+| .+|..|+.|.-+...|..
T Consensus 302 ~~~N~~A-PEHLel~~~~~---~~~~~~i~~AGaiFlG~~tp~a~GDY~aGpNHvLP-----T~G~AR~~sgLsv~~FlK 372 (412)
T PF00815_consen 302 ELANEYA-PEHLELQVEDP---EELLEKIRNAGAIFLGEYTPEALGDYAAGPNHVLP-----TGGTARFSSGLSVDDFLK 372 (412)
T ss_dssp HHHHHH---SEEEEESTTH---HHHGGG--S-SEEEESTT--HHHHHHTSSS-----------TTGGGT---S-GGGGEE
T ss_pred HHHHHhh-HHHHHHHHcCH---HHHHHHhhccChhhcCCCCCHHHhhhccCCCccCC-----CCccccccCCCcHHHccc
Confidence 9999842 23577888886 45666665 8999999752110 122233 357788888888899876
Q ss_pred eeEEE
Q 012790 385 VKSVV 389 (456)
Q Consensus 385 ~k~v~ 389 (456)
.-++.
T Consensus 373 ~~s~~ 377 (412)
T PF00815_consen 373 RISVQ 377 (412)
T ss_dssp EEEEE
T ss_pred eeeEE
Confidence 55543
|
In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B. |
| >PLN02926 histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.088 Score=54.45 Aligned_cols=255 Identities=17% Similarity=0.166 Sum_probs=142.9
Q ss_pred ccceEEEecceEEEEEcCCc-cc-hHhhHHHHHHHHhcCCeEEE--ecCCC-ChhHHHHHHHHHHHHHHHcCCCCCcEEE
Q 012790 41 KKAKVEFHPLGVVGAIVSWN-YP-FHNIFNPMLAAVFSGNGIVI--KVSEN-ASWSGCFYFRIIQAALAAVGAPENLVDV 115 (456)
Q Consensus 41 ~~~~~~~~P~GVv~vi~p~N-~P-~~~~~~~~~~ALaaGN~Vvl--Kps~~-~p~~~~~l~~l~~~~l~~aGlp~g~v~v 115 (456)
.....++.|+.-|++..|+- +| +++.++.++||-.||..=|+ -|+.. .......|+ +...+|..+ ++
T Consensus 112 v~~g~~~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~-----AA~~~Gv~e-Iy-- 183 (431)
T PLN02926 112 VRCRRVARPIGAVGLYVPGGTAVLPSTALMLAVPAQIAGCKTVVLATPPRKDGSICPEVLY-----CAKKAGVTH-IL-- 183 (431)
T ss_pred eEEEEEEechHHeeEeccCCCCCccHHHHHhhcchhhcCCCeEEEEECCCcCCCCCHHHHH-----HHHHcCCCe-ee--
Confidence 44568899999999999973 33 34567778899999986544 44422 011122222 123467654 11
Q ss_pred EeCChHhHHHHHh------ccCEEEecCCHHHHHHHHHHhhccCCc--ccccC-CCcceEEE--cCCCCHHHHHHHHHHH
Q 012790 116 ITGFAETGEALVS------SVDKIIFVGSPGVGRMIMRNASKTLTP--VTLEL-GGKDAFIV--CDDVDVPHVAQIAVRA 184 (456)
Q Consensus 116 v~g~~~~~~~L~~------~vd~i~fTGS~~~g~~v~~~aa~~~~p--v~lEl-gGk~p~iV--~~daDl~~aa~~i~~~ 184 (456)
--|+...-.+|.- ++|+|+=.|..=+..+ +.... ..+ |-..+ -|.|=++| +++||.+.++..++..
T Consensus 184 ~vGGaQAIAAlAyGTetIp~VDkIvGPGN~yV~~A--K~~v~-G~~~~VgID~~AGPSEvlIiAD~tA~p~~vAaDLLaQ 260 (431)
T PLN02926 184 KAGGAQAIAAMAWGTDSCPKVDKIFGPGNQYVTAA--KMILQ-NSEAMVSIDMPAGPSEVLVIADKTANPVHVAADLLSQ 260 (431)
T ss_pred ccCCHHHHHHHHcCCCCCCCCCEEECCCcHHHHHH--HHHhh-CCCCccccCCCCCCceeEEEeCCCCCHHHHHHHHHHH
Confidence 1255555555642 8999998887755321 11110 010 22222 34454433 3458999888777665
Q ss_pred HhhCCCCCcccCCeEEEeh--hhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCeEeecC
Q 012790 185 ALQSSGQNCAGAERFYVHR--DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG 262 (456)
Q Consensus 185 ~~~n~GQ~C~a~~~v~V~~--~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG 262 (456)
+=+.. .+ +.++|.. ++.++..+.+.+.++.+. + .+..+.+.+.
T Consensus 261 AEHdp----~a-~aiLvT~s~~la~~V~~~v~~ql~~l~----------------r------~~i~~~sl~~-------- 305 (431)
T PLN02926 261 AEHGP----DS-QVVLVAVGDVDLDAIEEEVEKQCQSLP----------------R------GEIASKALGH-------- 305 (431)
T ss_pred hccCC----CC-cEEEEECCHHHHHHHHHHHHHHHHhCC----------------h------HHHHHHHHHC--------
Confidence 44333 22 3344433 344555544444444331 0 1122222211
Q ss_pred CCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCceeEEecCCHHHHHHHHHhcc
Q 012790 263 SFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ 342 (456)
Q Consensus 263 ~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~ 342 (456)
-.|+.++|++||++++|..- +=...|.++|.. .+..+++
T Consensus 306 -------------------------------------g~iivv~~l~ea~~~~N~~A-PEHLei~~~~~~---~~l~~i~ 344 (431)
T PLN02926 306 -------------------------------------SFIVVARDMAEAISFSNLYA-PEHLIVNVEDAE---SWLDKID 344 (431)
T ss_pred -------------------------------------CEEEEECCHHHHHHHHHhhC-hHhheehhcCHH---HHHhhcC
Confidence 12456799999999999842 224567888864 4666665
Q ss_pred -cCCeeecCCcccccCcCCCccCC--------CCCCCCCcchHHHHhccceeeEE
Q 012790 343 -CGVAAINDFASNYMCQSLPFGGV--------KDSGFGRFAGVEGLRACCLVKSV 388 (456)
Q Consensus 343 -~G~v~iN~~~~~~~~~~~PfGG~--------~~SG~G~~~g~~gl~~ft~~k~v 388 (456)
+|.|++..+.. .++|.+ ..+|.+|+.|.-+...|...-++
T Consensus 345 nAGaiFlG~~sp------~a~GDY~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~ 393 (431)
T PLN02926 345 NAGSVFLGRWTP------ESVGDYASGTNHVLPTYGYARMYGGVSLDSFLKYMTV 393 (431)
T ss_pred ccceeccCCCCc------hhhhccccCcCcccCCCcceeecCCCcHHHhcceeeE
Confidence 89999986522 123222 13577788888888888765443
|
|
| >PRK12447 histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.24 Score=51.28 Aligned_cols=255 Identities=17% Similarity=0.202 Sum_probs=144.6
Q ss_pred ccceEEEecceEEEEEcCC-ccc-hHhhHHHHHHHHhcCCeEEEe--cCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEE
Q 012790 41 KKAKVEFHPLGVVGAIVSW-NYP-FHNIFNPMLAAVFSGNGIVIK--VSENASWSGCFYFRIIQAALAAVGAPENLVDVI 116 (456)
Q Consensus 41 ~~~~~~~~P~GVv~vi~p~-N~P-~~~~~~~~~~ALaaGN~VvlK--ps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv 116 (456)
.....++.|+--|++..|. .+| +++.++..+||-.||+.=|+- |+...-.....|+ +...+|..+ ++ -
T Consensus 107 v~~g~~~~Pl~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~i~p~iL~-----Aa~~~Gv~e-Iy--~ 178 (426)
T PRK12447 107 VILGHRNIPVNSVGCYVPGGRYPLVASAHMSVLTAKVAGVKRVIACTPPFPGEPPPAIVA-----AMHLAGADE-IY--V 178 (426)
T ss_pred eEEEEEEeehheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCCCCCCCCHHHHH-----HHHHcCCCe-eh--h
Confidence 3456789999999999995 444 345677888999999865544 4322111122222 123466654 11 1
Q ss_pred eCChHhHHHHHh------ccCEEEecCCHHHHHHHHHHhhccCCcccccC-CCcceE--EEcCCCCHHHHHHHHHHHHhh
Q 012790 117 TGFAETGEALVS------SVDKIIFVGSPGVGRMIMRNASKTLTPVTLEL-GGKDAF--IVCDDVDVPHVAQIAVRAALQ 187 (456)
Q Consensus 117 ~g~~~~~~~L~~------~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lEl-gGk~p~--iV~~daDl~~aa~~i~~~~~~ 187 (456)
-|+...-.+|.- +||+|+=.|..=+..+ +.... -.|-..+ -|.|=+ |-|++||.+..|..++..+=+
T Consensus 179 vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~A--K~~v~--g~V~ID~~AGPSEvlViAD~~Anp~~vAaDLLaQAEH 254 (426)
T PRK12447 179 LGGVQAVAAMAYGTETIKPVDMLVGPGNAYVAEA--KRQLF--GRVGIDLFAGPTETLVIADDTADPELVATDLLGQAEH 254 (426)
T ss_pred cCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHH--HHHhc--CccCcCCCCCCceeEEEeCCCCCHHHHHHHHHHHhcc
Confidence 255555556642 8999998887765321 11110 1222222 244443 334458999888777665443
Q ss_pred CCCCCcccCCeEEE--ehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCeEeecCCCC
Q 012790 188 SSGQNCAGAERFYV--HRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFG 265 (456)
Q Consensus 188 n~GQ~C~a~~~v~V--~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~ 265 (456)
.. .+ +.++| .+++.++..+.+.+.++.+. + .+.++.+.++
T Consensus 255 d~----~a-~~iLvT~s~~la~~V~~~v~~ql~~l~----------------r------~~i~~~sl~~----------- 296 (426)
T PRK12447 255 GP----NS-PAVLITTSRKLAEEVLAEIERLLAILP----------------T------ADVASAAWRD----------- 296 (426)
T ss_pred CC----CC-ceEEEECCHHHHHHHHHHHHHHHHhCC----------------H------HHHHHHHHHh-----------
Confidence 33 22 33444 33555555555555554431 0 1222322211
Q ss_pred CCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCceeEEecCCHHHHHHHHHhcc-cC
Q 012790 266 HLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ-CG 344 (456)
Q Consensus 266 ~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~-~G 344 (456)
+| .|+-++|++||++++|..- +=...|.++|. +.+..+++ +|
T Consensus 297 ------------------------------~g---~ii~v~~l~ea~~~~N~~A-PEHLel~~~~~---~~~l~~i~nAG 339 (426)
T PRK12447 297 ------------------------------YG---EVILCDDLEEMVAEADRYA-SEHVQVMTEDP---DWFLENMTNYG 339 (426)
T ss_pred ------------------------------CC---EEEEECCHHHHHHHHHhhC-hHheeehhCCH---HHHHhhcCccc
Confidence 11 1345799999999999842 22456788886 45666775 89
Q ss_pred CeeecCCcccccCcCCCccCC--------CCCCCCCcchHHHHhccceeeEE
Q 012790 345 VAAINDFASNYMCQSLPFGGV--------KDSGFGRFAGVEGLRACCLVKSV 388 (456)
Q Consensus 345 ~v~iN~~~~~~~~~~~PfGG~--------~~SG~G~~~g~~gl~~ft~~k~v 388 (456)
.|++..+.. .++|.+ ..+|..|+.|.-+.+.|...-++
T Consensus 340 aiFlG~~sp------~a~GDY~aGpNHvLPT~G~Ar~~sgLsv~~FlK~~s~ 385 (426)
T PRK12447 340 ALFLGERTN------VAYGDKVIGTNHVLPTSGAARYTGGLWVGKFLKTVTY 385 (426)
T ss_pred eeccCCCCc------hhhhhcccCCCcccCCCcceeecCCCcHHHhccceeE
Confidence 999976421 123322 24677888888888888654443
|
|
| >TIGR00069 hisD histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.21 Score=51.18 Aligned_cols=282 Identities=16% Similarity=0.174 Sum_probs=155.8
Q ss_pred HHHHHHHHHhhhhhhCCcccCCCcc---cccccceEEEecceEEEEEcCCc-cc-hHhhHHHHHHHHhcCCeEEEecCCC
Q 012790 13 CEKITWLLSEGEKWLKPEYRSSGRS---MIHKKAKVEFHPLGVVGAIVSWN-YP-FHNIFNPMLAAVFSGNGIVIKVSEN 87 (456)
Q Consensus 13 ~~~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~vi~p~N-~P-~~~~~~~~~~ALaaGN~VvlKps~~ 87 (456)
.+.|+...++.+++-+.+.. .++. ..+.....++.|+--|++..|+- +| +++.++..+||-.||+.=|+-.+|-
T Consensus 50 ~~ai~~A~~~I~~fh~~q~~-~~~~~~~~~Gv~~g~~~~Pi~rvGlYVPGG~a~~pStvLM~aiPAkvAGV~~Iv~~TPp 128 (393)
T TIGR00069 50 KEALELAAENIRAFHEAQLP-RSWEVETEPGVILGQRVRPLERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPP 128 (393)
T ss_pred HHHHHHHHHHHHHHHHHhCC-CCeEEecCCCeEEEEEEEEeheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCC
Confidence 34455555555554333321 1111 12345567899999999999973 33 3456777789999998655543332
Q ss_pred C---hhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh------ccCEEEecCCHHHHHHHHHHhhccCCcccc
Q 012790 88 A---SWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS------SVDKIIFVGSPGVGRMIMRNASKTLTPVTL 158 (456)
Q Consensus 88 ~---p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~------~vd~i~fTGS~~~g~~v~~~aa~~~~pv~l 158 (456)
. ......|+ +...+|..+ +- --|+...-.+|.- +||+|+=.|..=+..+ +.... -.|-.
T Consensus 129 ~~~g~i~p~iL~-----AA~~~Gv~e--Iy-~vGGAQAIAAlAyGTesIp~VDkIvGPGN~yV~~A--K~~v~--g~V~I 196 (393)
T TIGR00069 129 GKDGKINPAVLA-----AAKLAGVDE--VY-KVGGAQAIAALAYGTETVPKVDKIVGPGNIYVTAA--KKLVF--GDVGI 196 (393)
T ss_pred CcCCCCCHHHHH-----HHHHcCCCe--eh-hcCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHH--HHHhc--CccCc
Confidence 1 11121222 123467654 11 1255555556642 8999998887655321 11110 12222
Q ss_pred cC-CCcceEE--EcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEe--hhhHHHHHHHHHHHHhccccCCCCCCCCccc
Q 012790 159 EL-GGKDAFI--VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVH--RDIYALFVSQVAKIVKSVSAGPPLAGKYDMG 233 (456)
Q Consensus 159 El-gGk~p~i--V~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~--~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~g 233 (456)
.+ -|.|=+. -|++||.+.++..++..+=+.. .+ +.++|. +++.++..+.+.+.++.+.
T Consensus 197 D~~AGPSEvlViAD~~Anp~~iAaDLLaQAEHd~----~a-~~iLvT~s~~la~~V~~~v~~ql~~l~------------ 259 (393)
T TIGR00069 197 DMPAGPSEVLVIADETANPEFVAADLLSQAEHDP----DA-QAILVTTSEELAEAVQEEIERQLATLP------------ 259 (393)
T ss_pred CCCCCCceEEEEeCCCCCHHHHHHHHHHHhccCC----CC-cEEEEECCHHHHHHHHHHHHHHHHhCC------------
Confidence 22 2455433 3445899988877766543332 22 334443 3555666666666555441
Q ss_pred cccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHH
Q 012790 234 ALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVK 313 (456)
Q Consensus 234 pli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~ 313 (456)
. .++.+++.++ +| .++.++|++||++
T Consensus 260 ------r----~~i~~~al~~-----------------------------------------~g---~ii~v~~l~ea~~ 285 (393)
T TIGR00069 260 ------R----REIARKSLED-----------------------------------------NG---AIILVDDLEEAIE 285 (393)
T ss_pred ------h----HHHHHHHHHh-----------------------------------------CC---EEEEECCHHHHHH
Confidence 0 1223333221 11 1345799999999
Q ss_pred HHhcCCCCceeEEecCCHHHHHHHHHhcc-cCCeeecCCcccccCcCCCccCC--------CCCCCCCcchHHHHhccce
Q 012790 314 LANDSRYGLGCAVFSGSQHRAREIAAQIQ-CGVAAINDFASNYMCQSLPFGGV--------KDSGFGRFAGVEGLRACCL 384 (456)
Q Consensus 314 ~~n~~~~gL~~~vft~d~~~~~~~~~~l~-~G~v~iN~~~~~~~~~~~PfGG~--------~~SG~G~~~g~~gl~~ft~ 384 (456)
++|..- +=..-|.++|. +++..+++ +|.|++..+.. .++|.+ ..+|..|+.+.-+.+.|..
T Consensus 286 ~~N~~A-PEHLel~~~~p---~~~l~~I~nAGaiFlG~~tp------~a~GDY~aG~NHvLPT~G~Ar~~sgL~v~~F~K 355 (393)
T TIGR00069 286 ISNDYA-PEHLELQTKNP---EELLPKIRNAGSIFLGPYTP------EAAGDYAAGPNHVLPTGGTARFYSGLSVLDFLK 355 (393)
T ss_pred HHHhhC-hHhheehhCCH---HHHHhhcCccceeccCCCCc------hhhhhccCCCCcccCCCcceeecCCccHHHhcc
Confidence 999842 22455777776 45666665 89999987532 122222 2467788888888888865
Q ss_pred eeEE
Q 012790 385 VKSV 388 (456)
Q Consensus 385 ~k~v 388 (456)
.-++
T Consensus 356 ~~s~ 359 (393)
T TIGR00069 356 RITV 359 (393)
T ss_pred ceeE
Confidence 5444
|
This model describes a polypeptide sequence catalyzing the final step in histidine biosynthesis, found sometimes as an independent protein and sometimes as a part of a multifunctional protein. |
| >PRK00877 hisD bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.16 Score=52.52 Aligned_cols=282 Identities=17% Similarity=0.193 Sum_probs=154.3
Q ss_pred HHHHHHHHHhhhhhhCCcccCCCccc---ccccceEEEecceEEEEEcCCc-cc-hHhhHHHHHHHHhcCCeEEEe--cC
Q 012790 13 CEKITWLLSEGEKWLKPEYRSSGRSM---IHKKAKVEFHPLGVVGAIVSWN-YP-FHNIFNPMLAAVFSGNGIVIK--VS 85 (456)
Q Consensus 13 ~~~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~P~GVv~vi~p~N-~P-~~~~~~~~~~ALaaGN~VvlK--ps 85 (456)
.+.|+..+++.+++-+.|.. ..+.. .+.....++.|+--|++..|+- +| +++.++..+||-.||..=|+- |+
T Consensus 82 ~~ai~~A~~~I~~Fh~~q~~-~~~~~~~~~Gv~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp 160 (425)
T PRK00877 82 REALEEAAENIRAFHEAQKP-ESWDVETAPGVRLGQRWRPIERVGLYVPGGKAAYPSSVLMNAIPAKVAGVKEIVMVTPP 160 (425)
T ss_pred HHHHHHHHHHHHHHHHHhCC-CCeEEEecCCeEEEEEEEehHHeEEEccCCCCCchHHHHHhhcchhhcCCCeEEEEeCC
Confidence 44455555555554333321 12211 2334457899999999999973 33 345677788999999865544 43
Q ss_pred CCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh------ccCEEEecCCHHHHHHHHHHhhccCCccccc
Q 012790 86 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS------SVDKIIFVGSPGVGRMIMRNASKTLTPVTLE 159 (456)
Q Consensus 86 ~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~------~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lE 159 (456)
.........|+ +...+|..+ +- --|+...-.+|.- +||+|+=.|..=+..+ +.... -.|-..
T Consensus 161 ~~g~i~p~vL~-----AA~~~Gv~e--Iy-~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~A--K~~v~--g~V~ID 228 (425)
T PRK00877 161 PDGEINPAILA-----AAALAGVDE--VY-KVGGAQAIAALAYGTESIPKVDKIVGPGNIYVTAA--KRLVF--GVVGID 228 (425)
T ss_pred CCCCCCHHHHH-----HHHHcCCCe--ee-ccCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHH--HHHHc--CCcCcC
Confidence 21111111222 123467654 21 1255555556642 8999998887655321 11110 112222
Q ss_pred -CCCcceEEE--cCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEe--hhhHHHHHHHHHHHHhccccCCCCCCCCcccc
Q 012790 160 -LGGKDAFIV--CDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVH--RDIYALFVSQVAKIVKSVSAGPPLAGKYDMGA 234 (456)
Q Consensus 160 -lgGk~p~iV--~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~--~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gp 234 (456)
+-|.|=++| |++||.+..|..++..+=+.. .+ +.++|. +++.++..+.+.+.++.+.
T Consensus 229 ~~AGPSEvlViAD~~Anp~~vAaDLLaQAEHd~----~a-~aiLvT~s~~la~~V~~~v~~ql~~l~------------- 290 (425)
T PRK00877 229 MIAGPSEILVIADETADPDFVAADLLSQAEHDP----DA-QSILVTTSEELAEAVAAEVERQLATLP------------- 290 (425)
T ss_pred CCCCCceeEEEeCCCCCHHHHHHHHHHHhccCC----CC-cEEEEECCHHHHHHHHHHHHHHHHhCC-------------
Confidence 134454333 345899988887776544332 22 334443 3444555555555444331
Q ss_pred ccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHH
Q 012790 235 LCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKL 314 (456)
Q Consensus 235 li~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~ 314 (456)
| .+.++.+.++ +| .|+.++|+|||+++
T Consensus 291 --------r-~~ia~~sl~~-----------------------------------------~g---~iivv~~leeai~~ 317 (425)
T PRK00877 291 --------R-AEIARASLEG-----------------------------------------QG---AIILVDDLEEAIEL 317 (425)
T ss_pred --------h-HHHHHHHHHh-----------------------------------------CC---EEEEECCHHHHHHH
Confidence 0 1222222211 11 23457999999999
Q ss_pred HhcCCCCceeEEecCCHHHHHHHHHhcc-cCCeeecCCcccccCcCCCccCC--------CCCCCCCcchHHHHhcccee
Q 012790 315 ANDSRYGLGCAVFSGSQHRAREIAAQIQ-CGVAAINDFASNYMCQSLPFGGV--------KDSGFGRFAGVEGLRACCLV 385 (456)
Q Consensus 315 ~n~~~~gL~~~vft~d~~~~~~~~~~l~-~G~v~iN~~~~~~~~~~~PfGG~--------~~SG~G~~~g~~gl~~ft~~ 385 (456)
+|..- +=...|.++|.. .+..+++ +|.|++..+.. .++|.+ ..+|..|+.|.-+.+.|...
T Consensus 318 ~N~~A-PEHLel~~~~p~---~~l~~I~nAGaiFlG~~tp------~a~GDY~aGpNHvLPT~G~AR~~sgLsV~~F~K~ 387 (425)
T PRK00877 318 SNAYA-PEHLEIQTEDPR---ALLDRIRNAGAIFLGPYTP------ESLGDYAAGPNHVLPTSGTARFSSGLSVYDFLKR 387 (425)
T ss_pred HHhhC-hHheeehhCCHH---HHHhhcCccceeccCCCCc------hhhhhcccCCCcccCCCcceeecCCccHHHhccc
Confidence 99842 224567888864 4666664 89999986522 123222 24677888888888888755
Q ss_pred eEE
Q 012790 386 KSV 388 (456)
Q Consensus 386 k~v 388 (456)
-++
T Consensus 388 ~s~ 390 (425)
T PRK00877 388 SSV 390 (425)
T ss_pred eeE
Confidence 444
|
|
| >COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.1 Score=53.50 Aligned_cols=280 Identities=16% Similarity=0.208 Sum_probs=151.3
Q ss_pred HHHHHHHHHHhhhhhhCCcccCCCc--ccccccceEEEecceEEEEEcC---CccchHhhHHHHHHHHhcCCeEEE--ec
Q 012790 12 TCEKITWLLSEGEKWLKPEYRSSGR--SMIHKKAKVEFHPLGVVGAIVS---WNYPFHNIFNPMLAAVFSGNGIVI--KV 84 (456)
Q Consensus 12 ~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~vi~p---~N~P~~~~~~~~~~ALaaGN~Vvl--Kp 84 (456)
..+.|+..+++.++.-+.|...... ...+.....++.|+--|++..| .-|| ++.++..+||-.||+.=|+ -|
T Consensus 77 ~~eai~~A~~~I~~fH~~Q~p~~~~~~~~~Gv~~g~~~~Pi~~VGlYVPGG~A~yp-StvLM~avPAkvAGv~~Iv~~tP 155 (425)
T COG0141 77 VKEALEVAAENIEAFHEAQLPKDWLVETEPGVVLGQRWRPIERVGLYVPGGKAAYP-STVLMNAVPAKVAGVEEIVVVTP 155 (425)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCccceeccCCcEEEEEEEEhhheEEEccCCCcCCh-HHHHHhhccHhhcCCceEEEECC
Confidence 3455666666666655444321111 1124456788999999999999 4555 4456677899999986444 34
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh------ccCEEEecCCHHHHHHHHHHhhccCCcccc
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS------SVDKIIFVGSPGVGRMIMRNASKTLTPVTL 158 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~------~vd~i~fTGS~~~g~~v~~~aa~~~~pv~l 158 (456)
....-.....|+ +...+|+.+ +++ + |+...-.+|.- .||+|+=.|+.-+..+ +.......-+=+
T Consensus 156 p~~~gv~p~iL~-----AA~~~Gv~e-Iy~-v-GGAQAIAAlAYGTetV~~VdkIvGPGN~yVtaA--Kr~v~g~V~ID~ 225 (425)
T COG0141 156 PPKDGVNPEILA-----AARLAGVDE-VYK-V-GGAQAIAALAYGTETVPKVDKIVGPGNAYVTAA--KRLVSGVVGIDM 225 (425)
T ss_pred CCCCCCCHHHHH-----HHHHhCcHH-HHH-c-cCHHHHHHHHccCCcCCccCeeeCCCcHHHHHH--HHHhhCCcccCC
Confidence 443111111121 123466654 222 2 55555556642 8999998887755321 111111111112
Q ss_pred cCCCcceE--EEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEeh--hhHHHHHHHHHHHHhccccCCCCCCCCcccc
Q 012790 159 ELGGKDAF--IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHR--DIYALFVSQVAKIVKSVSAGPPLAGKYDMGA 234 (456)
Q Consensus 159 ElgGk~p~--iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~--~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gp 234 (456)
.. |.|=+ |-|++||.+..+..++..+=+. -.| +.|+|.. +..++..+++.+.++.+.
T Consensus 226 ~A-GPSEvlViAD~ta~p~~vA~DLLsQAEHd----~~a-~aiLvT~s~~la~~v~~~v~~~l~~l~------------- 286 (425)
T COG0141 226 IA-GPSEVLVIADETANPDFVAADLLSQAEHD----PDA-QAILVTDSEELAEAVEAAVERQLETLP------------- 286 (425)
T ss_pred CC-CCceEEEEeCCCCCHHHHHHHHHHHhhcC----CCc-eEEEEeCcHHHHHHHHHHHHHHHHhcc-------------
Confidence 22 44433 3344599998887776554333 333 3444443 334444444444443321
Q ss_pred ccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHH
Q 012790 235 LCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKL 314 (456)
Q Consensus 235 li~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~ 314 (456)
+ .+.+..+.. -|| .|+-.+|++||+++
T Consensus 287 --------~-~ei~~~~l~-----------------------------------------~~g---~iilv~~l~ea~~~ 313 (425)
T COG0141 287 --------R-AEIARKALE-----------------------------------------NYG---AIILVDDLDEAVEI 313 (425)
T ss_pred --------H-HHHHHHHHH-----------------------------------------hCC---eEEEECCHHHHHHH
Confidence 0 112222211 111 24567999999999
Q ss_pred HhcCCCCceeEEecCCHHHHHHHHHhcc-cCCeeecCCcccccCcCCCccCC--------CCCCCCCcchHHHHhccce
Q 012790 315 ANDSRYGLGCAVFSGSQHRAREIAAQIQ-CGVAAINDFASNYMCQSLPFGGV--------KDSGFGRFAGVEGLRACCL 384 (456)
Q Consensus 315 ~n~~~~gL~~~vft~d~~~~~~~~~~l~-~G~v~iN~~~~~~~~~~~PfGG~--------~~SG~G~~~g~~gl~~ft~ 384 (456)
+|..- +=..-|.++|+. .+..+++ +|.|+++.+.. -|+|.+ ..+|+-|+.+.-++..|..
T Consensus 314 ~N~~A-PEHLei~~~~p~---~~l~~I~nAGsIFlG~~sP------e~~GDY~aG~NHVLPT~g~AR~~s~L~v~dF~K 382 (425)
T COG0141 314 SNEYA-PEHLELQTENPR---ELLGKIRNAGSIFLGHYSP------ESLGDYAAGPNHVLPTSGTARFSSGLSVYDFLK 382 (425)
T ss_pred HHhhC-hHhhhhhhcCHH---HHHHHhcccceeeecCCCC------ccccccccCCCccCCCCccchhcCCccHHHhhh
Confidence 99842 235667888765 4666665 89999998632 133322 1356667777777777654
|
|
| >cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.8 Score=47.03 Aligned_cols=283 Identities=16% Similarity=0.180 Sum_probs=152.5
Q ss_pred HHHHHHHHHhhhhhhCCcccCCCccc---ccccceEEEecceEEEEEcCCc-cc-hHhhHHHHHHHHhcCCeEEEecCCC
Q 012790 13 CEKITWLLSEGEKWLKPEYRSSGRSM---IHKKAKVEFHPLGVVGAIVSWN-YP-FHNIFNPMLAAVFSGNGIVIKVSEN 87 (456)
Q Consensus 13 ~~~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~P~GVv~vi~p~N-~P-~~~~~~~~~~ALaaGN~VvlKps~~ 87 (456)
.+.|+...++.+++-+.+... .... .+.....++.|+--|++..|.- +| +++.++..+||-.||+.=|+-.+|-
T Consensus 54 ~~ai~~A~~nI~~fh~~q~~~-~~~~~~~~G~~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp 132 (390)
T cd06572 54 KEAIELAAENIRAFHEAQLPK-DWEVETEPGVVLGQRYRPIERVGLYVPGGTAPYPSTVLMLAIPAKVAGVKEIVVVTPP 132 (390)
T ss_pred HHHHHHHHHHHHHHHHHhCCC-CeEEEeCCCcEEEEEEEehhEEEEEecCCCCcchHHHHHhhcchhhcCCCeEEEEeCc
Confidence 444555555555543333222 1111 2455678899999999999965 55 3456777889999998655543332
Q ss_pred Ch---hHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh------ccCEEEecCCHHHHHHHHHHhhccCCcccc
Q 012790 88 AS---WSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS------SVDKIIFVGSPGVGRMIMRNASKTLTPVTL 158 (456)
Q Consensus 88 ~p---~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~------~vd~i~fTGS~~~g~~v~~~aa~~~~pv~l 158 (456)
.+ .....|+. ...+|..+ ++ --|+.....+|.- .+|+|+=.|..-+..+ +.... ..|-.
T Consensus 133 ~~~g~i~p~iL~a-----a~~~Gv~e-iy--~vGGaQAIAAlAyGTesi~~VDkIvGPGN~yV~~A--K~~v~--g~V~I 200 (390)
T cd06572 133 RKDGKINPAILAA-----AKLAGVDE-IY--KVGGAQAIAALAYGTETIPKVDKIVGPGNIYVTAA--KRLVS--GDVGI 200 (390)
T ss_pred CCCCCCCHHHHHH-----HHHcCCcE-Ee--ccCCHHHHHHHHcCCcCCCCCCEeeCCchHHHHHH--HHHhc--CCcCc
Confidence 11 11111221 23466654 11 2255555555542 7999988887655321 11111 11111
Q ss_pred c-CCCcce--EEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEeh--hhHHHHHHHHHHHHhccccCCCCCCCCccc
Q 012790 159 E-LGGKDA--FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHR--DIYALFVSQVAKIVKSVSAGPPLAGKYDMG 233 (456)
Q Consensus 159 E-lgGk~p--~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~--~i~d~f~~~l~~~~~~~~~g~~~~~~~~~g 233 (456)
. +-|.|= +|-+++||.+..+..++..+=+. -.+ +.++|.. +..++..+.+.+.++.+.
T Consensus 201 D~~AGPSEvlIiAD~~A~p~~vAaDLLaQAEH~----~~a-~aiLvT~s~~la~~V~~~v~~ql~~l~------------ 263 (390)
T cd06572 201 DMPAGPSEVLVIADETANPEFVAADLLSQAEHD----PDS-QAILVTTSEELAEAVEEEVERQLAELP------------ 263 (390)
T ss_pred cCCCCCceEEEEeCCCCCHHHHHHHHHhhhccC----CCC-eEEEEECCHHHHHHHHHHHHHHHHhCC------------
Confidence 1 124444 33444589998887776554332 222 3344433 444555555555444431
Q ss_pred cccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHH
Q 012790 234 ALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVK 313 (456)
Q Consensus 234 pli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~ 313 (456)
+. +.++.+..+ +| .++.++|++|+++
T Consensus 264 ----r~------~~~~~~~~~-----------------------------------------~g---~ii~~~~~~eai~ 289 (390)
T cd06572 264 ----RR------EIAAKSLLD-----------------------------------------YG---AIILVDDLEEAIE 289 (390)
T ss_pred ----cH------HHHHHHHHh-----------------------------------------CC---EEEEECCHHHHHH
Confidence 00 012211111 11 2446799999999
Q ss_pred HHhcCCCCceeEEecCCHHHHHHHHHhcc-cCCeeecCCccc-c------cCcCCCccCCCCCCCCCcchHHHHhcccee
Q 012790 314 LANDSRYGLGCAVFSGSQHRAREIAAQIQ-CGVAAINDFASN-Y------MCQSLPFGGVKDSGFGRFAGVEGLRACCLV 385 (456)
Q Consensus 314 ~~n~~~~gL~~~vft~d~~~~~~~~~~l~-~G~v~iN~~~~~-~------~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~ 385 (456)
++|..- +=..-|.++|... +..+++ +|.|++..+... . .++-+| .+|..|+.|.-+.+.|...
T Consensus 290 ~~N~~A-PEHLel~~~~~~~---~l~~i~nAGsiFlG~~tp~a~GDY~aGpNHvLP-----T~G~Ar~~sgL~v~~F~K~ 360 (390)
T cd06572 290 LANEYA-PEHLELQTEDPEE---LLEKIRNAGSIFLGPYTPEALGDYAAGPNHVLP-----TGGTARFYSGLSVDDFLKR 360 (390)
T ss_pred HHHhhc-hhhheeHhcCHHH---HHhhCccceEEeecCCCchhhhccccCCCCccC-----CCcceeecCCCCHHHheec
Confidence 999842 2356778888644 666664 899999875211 1 122233 3566777777788888755
Q ss_pred eEE
Q 012790 386 KSV 388 (456)
Q Consensus 386 k~v 388 (456)
-++
T Consensus 361 ~s~ 363 (390)
T cd06572 361 ITV 363 (390)
T ss_pred cee
Confidence 544
|
C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway. |
| >PRK13769 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.16 E-value=1.8 Score=44.06 Aligned_cols=241 Identities=15% Similarity=0.133 Sum_probs=133.3
Q ss_pred cccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 012790 40 HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 119 (456)
Q Consensus 40 ~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~ 119 (456)
+.....++.|+-.|++..|.-|| ++.++..++|-.||+.=|+-.+|-.......|+ ++..+|..+ +- --|+
T Consensus 84 Gv~~g~~~~Pi~rvG~YVPa~~p-StvLM~~iPAkvAGV~~Iv~~TPp~~i~p~vL~-----aa~~~Gv~e--Iy-~vGG 154 (368)
T PRK13769 84 GVLRSVFWKPVRRAALYVPARYV-STLVMLAVPARAAGVEEIYVVTPPRGVTGELLA-----VAKELGVKG--VL-AIGG 154 (368)
T ss_pred CeEEEEEEeeeeeeEEEeccchH-HHHHHhhccHhhcCCCeEEEeCCCCCCCHHHHH-----HHHHcCCCe--ee-cccC
Confidence 34456789999999999995554 556778889999998765544432111111222 123466654 21 2255
Q ss_pred hHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccC-CCcce-EEEcCCCCHHHHHHHHHHHHhhCCCCCccc
Q 012790 120 AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLEL-GGKDA-FIVCDDVDVPHVAQIAVRAALQSSGQNCAG 195 (456)
Q Consensus 120 ~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lEl-gGk~p-~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a 195 (456)
...-.++.. ++|+|+=.|..=+..+ |.... -.|-..+ -|.|= +||.++||.+.++..++..+=+. -.+
T Consensus 155 AQAIAa~a~gt~VDkIvGPGN~yV~~A--K~~v~--g~V~ID~~AGPSEvlViAD~a~p~~vAaDLLaQAEH~----~~a 226 (368)
T PRK13769 155 PHGLAYAVFHMGVDMVAGPGGLYVQAA--KYVLS--QYVGIDGIEGPTELVVYAEGVPPEVAVRGALAQLEHG----PTS 226 (368)
T ss_pred HHHHHHHhcCCCcCEEECCCcHHHHHH--HHHHh--CCcCCCCcCCCcceEEEcCCCCHHHHHHHHHHHhhcC----CCC
Confidence 554456655 9999998887765321 11110 1122221 23333 55555688887776665543322 222
Q ss_pred CCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcc
Q 012790 196 AERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQY 275 (456)
Q Consensus 196 ~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~ 275 (456)
+.++|..+ +++.+++.+++++. +. . + . +.
T Consensus 227 -~~iLvT~s--~~la~~V~~~v~~~---------------------------~~----~-~------~---------~~- 255 (368)
T PRK13769 227 -FAYLLSTD--AELLKAAEEIYRRE---------------------------RT----S-S------M---------GP- 255 (368)
T ss_pred -cEEEEECC--HHHHHHHHHHHHHH---------------------------HH----h-c------C---------CC-
Confidence 34444443 34444444433320 10 0 0 0 00
Q ss_pred ccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcC-CCCceeEEecCCHHHHHHHHHhcc-cCCeeecCCcc
Q 012790 276 FPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDS-RYGLGCAVFSGSQHRAREIAAQIQ-CGVAAINDFAS 353 (456)
Q Consensus 276 ~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~-~~gL~~~vft~d~~~~~~~~~~l~-~G~v~iN~~~~ 353 (456)
..|+-++|++||++++|.. +--|.. .+. +.+..+++ +|.|+++..
T Consensus 256 ------------------------~~iivv~~leeai~~~N~~APEHLel--~~~-----~~~~~~i~nAGsiFl~~p-- 302 (368)
T PRK13769 256 ------------------------LEVRKVAGVEEAVRFIDEIAPEHLEV--WGR-----REVAYRVRNVGAVSVNMP-- 302 (368)
T ss_pred ------------------------CeEEEECCHHHHHHHHHhhChHheEe--eCc-----HHHHhhCCccCChhcCCc--
Confidence 2466789999999999984 333444 332 22555664 899999432
Q ss_pred cccCcCCCccCC--------CCCCCCCcchHHHHhccceeeE
Q 012790 354 NYMCQSLPFGGV--------KDSGFGRFAGVEGLRACCLVKS 387 (456)
Q Consensus 354 ~~~~~~~PfGG~--------~~SG~G~~~g~~gl~~ft~~k~ 387 (456)
.++|.+ ..+|..|+.|.-+...|...-+
T Consensus 303 ------~a~GDY~aGpNHvLPT~G~AR~~sgLsv~~FlK~~t 338 (368)
T PRK13769 303 ------SPYLDYVAGISHVLPTGGTARWRGIITPLTFMKPIG 338 (368)
T ss_pred ------hhhhccccCCCCcCCCCcceeccCCCcHHHccccee
Confidence 123222 1357778888888888765444
|
|
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=92.41 E-value=0.32 Score=57.49 Aligned_cols=99 Identities=12% Similarity=0.147 Sum_probs=71.2
Q ss_pred ccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeC
Q 012790 39 IHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITG 118 (456)
Q Consensus 39 ~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g 118 (456)
.+.++.+...|.|+|+++++-.- ..+..++.+|++||.||+..++.. . +++ +++|+.+.+.+.-
T Consensus 1177 TGE~N~l~l~pRg~vLcl~~~~~---~~~~Ql~Aala~Gn~~v~~~~~~~---~----~~~------~~Lp~~v~~~v~~ 1240 (1318)
T PRK11809 1177 TGERNTYTLLPRERVLCLADTEQ---DALTQLAAVLAVGSQALWPDDALH---R----ALV------AALPAAVQARIQL 1240 (1318)
T ss_pred CCCcceeeccCCCcEEEeCCCHH---HHHHHHHHHHHhCCEEEEeCCchh---H----HHH------HhccHHHHhHhhh
Confidence 35678999999999999987333 578899999999999998754432 1 121 3478887776532
Q ss_pred ChHhHHHHHh-ccCEEEecCCHHHHHHHHHHhhccCCc
Q 012790 119 FAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTP 155 (456)
Q Consensus 119 ~~~~~~~L~~-~vd~i~fTGS~~~g~~v~~~aa~~~~p 155 (456)
. ....+.. .++.|.|-|.....+.+.++.+++--|
T Consensus 1241 ~--~~~~~~~~~~~avl~~G~~~~l~~~~~~LA~R~Ga 1276 (1318)
T PRK11809 1241 A--KDWQLADQPFDAVLFHGDSDQLRALCEQVAQRDGP 1276 (1318)
T ss_pred c--cccccccCCccEEEEeCCHHHHHHHHHHHhcCCCC
Confidence 1 1122223 799999999999999998887766433
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 456 | ||||
| 3b4w_A | 495 | Crystal Structure Of Mycobacterium Tuberculosis Ald | 4e-52 | ||
| 4a0m_A | 496 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 4e-51 | ||
| 3iwk_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1 | 3e-50 | ||
| 4i8p_A | 520 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1a | 3e-49 | ||
| 3iwj_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 2 | 4e-49 | ||
| 1a4s_A | 503 | Betaine Aldehyde Dehydrogenase From Cod Liver Lengt | 1e-47 | ||
| 3ifg_A | 484 | Crystal Structure Of Succinate-Semialdehyde Dehydro | 1e-47 | ||
| 4i9b_A | 517 | Structure Of Aminoaldehyde Dehydrogenase 1 From Sol | 2e-47 | ||
| 3ed6_A | 520 | 1.7 Angstrom Resolution Crystal Structure Of Betain | 2e-47 | ||
| 4i8q_A | 514 | Structure Of The Aminoaldehyde Dehydrogenase 1 E260 | 9e-47 | ||
| 4fr8_A | 500 | Crystal Structure Of Human Aldehyde Dehydrogenase-2 | 4e-46 | ||
| 1o05_A | 500 | Apo Form Of Human Mitochondrial Aldehyde Dehydrogen | 8e-46 | ||
| 3n81_A | 500 | T244a Mutant Of Human Mitochondrial Aldehyde Dehydr | 9e-46 | ||
| 1cw3_A | 494 | Human Mitochondrial Aldehyde Dehydrogenase Complexe | 1e-45 | ||
| 2onn_A | 500 | Arg475gln Mutant Of Human Mitochondrial Aldehyde De | 3e-45 | ||
| 1nzw_A | 500 | Cys302ser Mutant Of Human Mitochondrial Aldehyde De | 9e-45 | ||
| 3n80_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase, Apo For | 1e-44 | ||
| 1zum_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 1e-44 | ||
| 1ag8_A | 499 | Aldehyde Dehydrogenase From Bovine Mitochondria Len | 1e-44 | ||
| 3i44_A | 497 | Crystal Structure Of Aldehyde Dehydrogenase From Ba | 3e-44 | ||
| 1bi9_A | 499 | Retinal Dehydrogenase Type Two With Nad Bound Lengt | 5e-44 | ||
| 3sza_A | 469 | Crystal Structure Of Human Aldh3a1 - Apo Form Lengt | 9e-44 | ||
| 3inl_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 1e-43 | ||
| 1ad3_A | 452 | Class 3 Aldehyde Dehydrogenase Complex With Nicotin | 2e-43 | ||
| 1bxs_A | 501 | Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad | 3e-43 | ||
| 2wox_A | 489 | Betaine Aldehyde Dehydrogenase From Pseudomonas Aer | 3e-43 | ||
| 2wme_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 4e-43 | ||
| 2imp_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 4e-43 | ||
| 3jz4_A | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 6e-43 | ||
| 2hg2_A | 479 | Structure Of Lactaldehyde Dehydrogenase Length = 47 | 6e-43 | ||
| 3jz4_C | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 7e-43 | ||
| 2opx_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 1e-42 | ||
| 2xdr_A | 489 | Crystallographic Structure Of Betaine Aldehyde Dehy | 2e-42 | ||
| 3zqa_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 4e-42 | ||
| 2wme_C | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 6e-42 | ||
| 3ty7_A | 478 | Crystal Structure Of Aldehyde Dehydrogenase Family | 1e-41 | ||
| 4h7n_A | 474 | The Structure Of Putative Aldehyde Dehydrogenase Pu | 3e-41 | ||
| 1o9j_A | 501 | The X-Ray Crystal Structure Of Eta-Crystallin Lengt | 7e-41 | ||
| 3prl_A | 505 | Crystal Structure Of Nadp-Dependent Glyceraldehyde- | 9e-41 | ||
| 3r31_A | 517 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 1e-40 | ||
| 1euh_A | 475 | Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase | 6e-40 | ||
| 3rh9_A | 506 | The Crystal Structure Of Oxidoreductase From Marino | 8e-40 | ||
| 2d4e_A | 515 | Crystal Structure Of The Hpcc From Thermus Thermoph | 9e-40 | ||
| 2id2_A | 475 | Gapn T244s Mutant X-Ray Structure At 2.5 A Length = | 1e-39 | ||
| 2esd_A | 475 | Crystal Structure Of Thioacylenzyme Intermediate Of | 4e-39 | ||
| 3k2w_A | 497 | Crystal Structure Of Betaine-Aldehyde Dehydrogenase | 4e-39 | ||
| 2w8n_A | 487 | The Crytal Structure Of The Oxidized Form Of Human | 5e-39 | ||
| 1qi1_A | 475 | Ternary Complex Of An Nadp Dependent Aldehyde Dehyd | 7e-39 | ||
| 3ros_A | 484 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 3e-38 | ||
| 3efv_A | 462 | Crystal Structure Of A Putative Succinate-Semialdeh | 3e-38 | ||
| 3pqa_A | 486 | Crystal Structure Of Glyceraldehyde-3-Phosphate Deh | 4e-38 | ||
| 1wnb_A | 495 | Escherichia Coli Ydcw Gene Product Is A Medium-Chai | 5e-38 | ||
| 2w8p_A | 487 | The Crystal Structure Of Human C340a Ssadh Length = | 6e-38 | ||
| 4dng_A | 485 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 2e-37 | ||
| 4dal_A | 498 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 6e-37 | ||
| 3ek1_A | 504 | Crystal Structure Of Aldehyde Dehydrogenase From Br | 8e-37 | ||
| 3lv1_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 1e-36 | ||
| 2o2p_A | 517 | Crystal Structure Of The C-Terminal Domain Of Rat 1 | 2e-36 | ||
| 3rhm_A | 517 | Crystal Structure Of The E673q Mutant Of C-Terminal | 4e-36 | ||
| 3rhj_A | 517 | Crystal Structure Of The E673a Mutant Of The C-Term | 9e-36 | ||
| 3rhr_A | 517 | Crystal Structure Of The C707a Mutant Of The C-Term | 2e-35 | ||
| 3lns_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 2e-35 | ||
| 4gnz_A | 517 | Crystal Structure Of The C707s Mutant Of C-terminal | 2e-35 | ||
| 3u4j_A | 528 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 8e-35 | ||
| 3rhl_A | 517 | Crystal Structure Of The E673aC707A DOUBLE MUTANT O | 1e-34 | ||
| 3rjl_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 6e-31 | ||
| 3qan_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 1e-29 | ||
| 3r64_A | 508 | Crystal Structure Of A Nad-Dependent Benzaldehyde D | 1e-29 | ||
| 1ky8_A | 501 | Crystal Structure Of The Non-Phosphorylating Glycer | 5e-28 | ||
| 1uxv_A | 501 | Structural Basis For Allosteric Regulation And Subs | 7e-28 | ||
| 1uxn_A | 501 | Structural Basis For Allosteric Regulation And Subs | 2e-27 | ||
| 2jg7_A | 510 | Crystal Structure Of Seabream Antiquitin And Elucid | 3e-27 | ||
| 2bhp_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 5e-26 | ||
| 2j6l_A | 500 | Structure Of Aminoadipate-Semialdehyde Dehydrogenas | 1e-25 | ||
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate Dehydrogenase Length = 51 | 2e-25 | ||
| 2bja_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 8e-25 | ||
| 1t90_A | 486 | Crystal Structure Of Methylmalonate Semialdehyde De | 2e-22 | ||
| 4f9i_A | 1026 | Crystal Structure Of Proline Utilization A (Puta) F | 3e-22 | ||
| 3haz_A | 1001 | Crystal Structure Of Bifunctional Proline Utilizati | 7e-20 | ||
| 4e4g_A | 521 | Crystal Structure Of Putative Methylmalonate-Semial | 1e-19 | ||
| 3ju8_A | 490 | Crystal Structure Of Succinylglutamic Semialdehyde | 2e-18 | ||
| 3v9j_A | 563 | Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylat | 4e-15 | ||
| 3v9g_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 6e-13 | ||
| 3v9h_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 9e-13 | ||
| 3v9i_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 1e-12 |
| >pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde Dehydrogenase Complexed With Nad+ Length = 495 | Back alignment and structure |
|
| >pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496 | Back alignment and structure |
|
| >pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503 | Back alignment and structure |
|
| >pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520 | Back alignment and structure |
|
| >pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503 | Back alignment and structure |
|
| >pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503 | Back alignment and structure |
|
| >pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase From Burkholderia Pseudomallei, Part 1 Of 2 Length = 484 | Back alignment and structure |
|
| >pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517 | Back alignment and structure |
|
| >pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520 | Back alignment and structure |
|
| >pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514 | Back alignment and structure |
|
| >pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500 | Back alignment and structure |
|
| >pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494 | Back alignment and structure |
|
| >pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500 | Back alignment and structure |
|
| >pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499 | Back alignment and structure |
|
| >pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497 | Back alignment and structure |
|
| >pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499 | Back alignment and structure |
|
| >pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form Length = 469 | Back alignment and structure |
|
| >pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500 | Back alignment and structure |
|
| >pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide- Adenine-Dinucleotide Length = 452 | Back alignment and structure |
|
| >pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501 | Back alignment and structure |
|
| >pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489 | Back alignment and structure |
|
| >pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479 | Back alignment and structure |
|
| >pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479 | Back alignment and structure |
|
| >pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479 | Back alignment and structure |
|
| >pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489 | Back alignment and structure |
|
| >pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490 | Back alignment and structure |
|
| >pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478 | Back alignment and structure |
|
| >pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From Anabaena Variabilis. Length = 474 | Back alignment and structure |
|
| >pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501 | Back alignment and structure |
|
| >pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Halodurans C-125 Length = 505 | Back alignment and structure |
|
| >pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517 | Back alignment and structure |
|
| >pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475 | Back alignment and structure |
|
| >pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter Aquaeolei Length = 506 | Back alignment and structure |
|
| >pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515 | Back alignment and structure |
|
| >pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475 | Back alignment and structure |
|
| >pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From Pseudoalteromonas Atlantica T6c Length = 497 | Back alignment and structure |
|
| >pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Lactobacillus Acidophilus Length = 484 | Back alignment and structure |
|
| >pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462 | Back alignment and structure |
|
| >pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486 | Back alignment and structure |
|
| >pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495 | Back alignment and structure |
|
| >pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485 | Back alignment and structure |
|
| >pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 498 | Back alignment and structure |
|
| >pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504 | Back alignment and structure |
|
| >pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ Length = 457 | Back alignment and structure |
|
| >pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadph Length = 517 | Back alignment and structure |
|
| >pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ And Benzoate Adduct Length = 457 | Back alignment and structure |
|
| >pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528 | Back alignment and structure |
|
| >pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538 | Back alignment and structure |
|
| >pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538 | Back alignment and structure |
|
| >pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde Dehydrogenase From Corynebacterium Glutamicum Length = 508 | Back alignment and structure |
|
| >pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating Glyceraldehyde-3- Phosphate Dehydrogenase Length = 501 | Back alignment and structure |
|
| >pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation Of Its Substrate Specificity Length = 510 | Back alignment and structure |
|
| >pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nad. Length = 516 | Back alignment and structure |
|
| >pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase Length = 516 | Back alignment and structure |
|
| >pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nadh Length = 516 | Back alignment and structure |
|
| >pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486 | Back alignment and structure |
|
| >pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From Geobacter Sulfurreducens Pca Length = 1026 | Back alignment and structure |
|
| >pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A (Puta) Protein Length = 1001 | Back alignment and structure |
|
| >pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 521 | Back alignment and structure |
|
| >pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde Dehydrogenase From Pseudomonas Aeruginosa. Length = 490 | Back alignment and structure |
|
| >pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate Dehydrogenase Complexed With Sulfate Ion Length = 563 | Back alignment and structure |
|
| >pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Length = 566 | Back alignment and structure |
|
| >pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352a Length = 566 | Back alignment and structure |
|
| >pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352l Length = 566 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495 | Back alignment and structure |
|---|
Score = 315 bits (810), Expect = e-103
Identities = 118/348 (33%), Positives = 181/348 (52%), Gaps = 21/348 (6%)
Query: 49 PLGVVGAIVSWNYPFHNIFN---PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 105
P+GVVGAIV+WN P N P L A G IV+K + + +
Sbjct: 146 PVGVVGAIVAWNVPLFLAVNKIAPALLA---GCTIVLKPAAETPLTANALAEVFAEV--- 199
Query: 106 VGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK 163
G PE ++ V+ G ETG+AL S+ +D F GS VGR + R A++ L P TLELGGK
Sbjct: 200 -GLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAEMLKPCTLELGGK 258
Query: 164 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 223
A I+ +DVD+ + V + + ++GQ C R R Y V+ V V ++ G
Sbjct: 259 SAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVG 318
Query: 224 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS-FGHLSEGAVDQYF-PPTVI 281
PP +G L + +++ + +++GA ++ G L G +F PTV
Sbjct: 319 PPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNG----FFIQPTVF 374
Query: 282 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 341
+V++ M + QEE FGP++ I+ ++T+E+ + +ANDS YGL +V++ + +I+ QI
Sbjct: 375 ADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQI 434
Query: 342 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389
+ G IN +A + PFGG K+SG GR G EG+ KSV+
Sbjct: 435 RTGTYGINWYAFDP---GSPFGGYKNSGIGRENGPEGVEHFTQQKSVL 479
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517 | Back alignment and structure |
|---|
Score = 309 bits (794), Expect = e-100
Identities = 117/361 (32%), Positives = 167/361 (46%), Gaps = 24/361 (6%)
Query: 49 PLGVVGAIVSWNYPFHNIFN----PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALA 104
PLGV I +WNYP I P L A GN +V K SEN I+ A
Sbjct: 150 PLGVCVGIGAWNYPQ-QIACWKAAPALVA---GNAMVFKPSENTPLGALKIAEILIEA-- 203
Query: 105 AVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162
G P+ L +VI G +TG LV+ V K+ GS GR + A+ L VT+ELGG
Sbjct: 204 --GLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAAAGHLKHVTMELGG 261
Query: 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 222
K IV DD D+ A+ SSGQ C+ R +V + A F+ + + +++
Sbjct: 262 KSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMIL 321
Query: 223 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF--GHLSEGAVDQYFPPTV 280
G PL +G L EK+ + + +GA ++ G EGA Y PTV
Sbjct: 322 GDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGA---YVQPTV 378
Query: 281 IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQ 340
+V M + +EE FGP+M ++ F+ ++EV+ AN + +GL VF+ RA +
Sbjct: 379 FADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAHRVVDG 438
Query: 341 IQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV---VEDRWWPYI 397
++ G IN + N +PFGG K SGFGR L +K+V PY
Sbjct: 439 LEAGTLWINTY--NLCPVEIPFGGSKQSGFGRENSAAALEHYSELKTVYVSTGKVDAPYA 496
Query: 398 K 398
+
Sbjct: 497 E 497
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503 | Back alignment and structure |
|---|
Score = 308 bits (791), Expect = e-100
Identities = 125/360 (34%), Positives = 183/360 (50%), Gaps = 25/360 (6%)
Query: 49 PLGVVGAIVSWNYPFHNIF---NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 105
P+GVVG I WNYP P LAA G ++K SE AS + I +
Sbjct: 151 PIGVVGLITPWNYPMLMATWKVAPALAA---GCAAILKPSELASLTCLELGEICKEV--- 204
Query: 106 VGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162
G P +++++TG E G L + VDK+ F GS G IM A++ + PV+LELGG
Sbjct: 205 -GLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIMTAAAQLVKPVSLELGG 263
Query: 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 222
K +V +DVD+ A+ A+ ++GQ C+ R +H I F++++ K +K++
Sbjct: 264 KSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIKI 323
Query: 223 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS-FGHLSEGAVDQYF-PPTV 280
PL +G + EK+ V++A +GA IL GS HL +G +F PT+
Sbjct: 324 SDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKG----FFIEPTI 379
Query: 281 IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQ 340
I +V M++ +EE FGP++ + F+T+EE + LAND+ YGLG AV S R +
Sbjct: 380 ITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKA 439
Query: 341 IQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV----EDRWWPY 396
+ G+ +N P+GGVK SGFGR G GL VK V E+ W Y
Sbjct: 440 FKAGIVWVNCS--QPCFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTQYISEEPWGWY 497
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520 | Back alignment and structure |
|---|
Score = 308 bits (792), Expect = e-100
Identities = 114/360 (31%), Positives = 175/360 (48%), Gaps = 19/360 (5%)
Query: 49 PLGVVGAIVSWNYPFHNIF---NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 105
P+GVV I WNYP P LA G +V+K SE + F +++
Sbjct: 170 PVGVVTQITPWNYPLLQASWKIAPALAT---GCSLVMKPSEITPLTTIRVFELMEEV--- 223
Query: 106 VGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162
G P+ +++I G +E G+ + VD + F G G+ IM+NA+ +T + LELGG
Sbjct: 224 -GFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAANNVTNIALELGG 282
Query: 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 222
K+ I+ DD D A+ +GQ C+ R V I F + VK +
Sbjct: 283 KNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKL 342
Query: 223 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIV 282
G +MG + EH K+++ ++ A +GA I G + +F PTVI
Sbjct: 343 GNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVIT 402
Query: 283 NVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ 342
N + +M+++QEE FGP++ + F T++E ++LANDS YGL AVFS +A+ +A +++
Sbjct: 403 NCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLK 462
Query: 343 CGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV----EDRWWPYIK 398
G INDF + P+GG K SG GR G EGL + K ++ + K
Sbjct: 463 LGTVWINDF--HPYFAQAPWGGYKQSGIGRELGKEGLEEYLVSKHILTNTNPQLVNWFSK 520
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503 | Back alignment and structure |
|---|
Score = 306 bits (785), Expect = 2e-99
Identities = 121/349 (34%), Positives = 179/349 (51%), Gaps = 18/349 (5%)
Query: 49 PLGVVGAIVSWNYPFHNIFN----PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALA 104
PLGV I++WNYPF I P LA GN +V K S +G I A
Sbjct: 155 PLGVCAGILAWNYPF-MIAAWKCAPALAC---GNAVVFKPSPMTPVTGVILAEIFHEA-- 208
Query: 105 AVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162
G P LV+V+ G AETG L +V K+ F GS G+ +M ++KT+ VTLELGG
Sbjct: 209 --GVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGG 266
Query: 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 222
K ++ D ++ + + A+ A + GQ C R +V R+I F+ +V K K++
Sbjct: 267 KSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVV 326
Query: 223 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ-YF-PPTV 280
G PL + MG L +K+ V A +GA +L G S+ + YF P V
Sbjct: 327 GDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCV 386
Query: 281 IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQ 340
+ N M ++EE FGP+M ++ F+T+EEV++ AN++ +GL VF+ RA +AA
Sbjct: 387 LDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAAN 446
Query: 341 IQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389
++ G IN + + +PFGG K SGFGR G + +K+V+
Sbjct: 447 LEAGTCYINTY--SISPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVI 493
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484 | Back alignment and structure |
|---|
Score = 304 bits (782), Expect = 3e-99
Identities = 110/392 (28%), Positives = 178/392 (45%), Gaps = 24/392 (6%)
Query: 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFH 64
S E+ + G + LKP +S A GV+ A WN+P +
Sbjct: 83 SKEEVELCVSICNYYADHGPEMLKPTKLNSD----LGNAYYLKQSTGVIMACEPWNFPLY 138
Query: 65 NIF---NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAE 121
+ P GN I++K + N S +II+ A GAPE + + +
Sbjct: 139 QVIRVFAPNFIV---GNPILLKHAHNVPGSAALTAKIIKRA----GAPEGSLINLYPSYD 191
Query: 122 TGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQ 179
+++ + + GS G + A K L T+ELGG DAFIV DD D +
Sbjct: 192 QLADIIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAFIVLDDADPQVLRN 251
Query: 180 IAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLE 239
+ A + GQ C ++R V + Y + ++ + ++ AG PL + + +
Sbjct: 252 VLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEK 311
Query: 240 HSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPI 299
EKL+ V +A+D GA++ + S+GA +F PT++ ++ + +E FGPI
Sbjct: 312 AKEKLEAQVKEAIDAGAKVFYQYP-EIDSKGA---FFRPTILTDIAKDNPVFDKEVFGPI 367
Query: 300 MPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDF-ASNYMCQ 358
+ D ++LANDS YGLG +V RA++++AQI+ G+ IN ++
Sbjct: 368 AEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGMTVINGRWITS---G 424
Query: 359 SLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 390
LPFGG+K SG+GR GL A V++
Sbjct: 425 ELPFGGIKKSGYGRELSGLGLMAFVNEHLVID 456
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462 | Back alignment and structure |
|---|
Score = 303 bits (779), Expect = 4e-99
Identities = 117/394 (29%), Positives = 183/394 (46%), Gaps = 24/394 (6%)
Query: 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFH 64
+ E+ + W G L PE +++A +E+ PLGV+ AI+ WN+P
Sbjct: 86 ARAEVTKSAALCDWYAEHGPAMLNPEPTLVE----NQQAVIEYRPLGVILAIMPWNFPLW 141
Query: 65 NIF---NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAE 121
+ P+L A GN ++K + N + ++I LA G P + + E
Sbjct: 142 QVLRGAVPILLA---GNSYLLKHAPNVTGCA----QMIARILAEAGTPAGVYGWVNANNE 194
Query: 122 TGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQ 179
+++ + + GS G I A L LELGG D FIV +D D+ +
Sbjct: 195 GVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLNDADLELAVK 254
Query: 180 IAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLE 239
AV Q++GQ CA A+RF V I F + ++ G PL + D+G + +
Sbjct: 255 AAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFD 314
Query: 240 HSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPI 299
++L V ++ +GA +L G EG Y+ TV+ +V M ++E FGP+
Sbjct: 315 LRDELHQQVQASVAEGARLLLGGE-KIAGEGN---YYAATVLADVTPDMTAFRQELFGPV 370
Query: 300 MPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDF-ASNYMCQ 358
I + LANDS +GL +F+ A E+AA+++CG IN + AS+
Sbjct: 371 AAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEMAARLECGGVFINGYSASD---A 427
Query: 359 SLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 392
+ FGGVK SGFGR GL C V++V ++R
Sbjct: 428 RVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKNR 461
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478 | Back alignment and structure |
|---|
Score = 304 bits (780), Expect = 5e-99
Identities = 106/350 (30%), Positives = 167/350 (47%), Gaps = 23/350 (6%)
Query: 49 PLGVVGAIVSWNYPFHNIFN---PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 105
+GV G I WN+P + AA G+ +V+K SE ++ I
Sbjct: 139 AIGVSGLITPWNFPTNQTSLKLAAAFAA---GSPVVLKPSEETPFAAVILAEIFDKV--- 192
Query: 106 VGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162
G P+ + +++ G A G L V + F GS G IM A+K V+LELGG
Sbjct: 193 -GVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAAKDFKKVSLELGG 251
Query: 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 222
K +IV DDVD+ A+ + ++GQ C R V I F++++ + V
Sbjct: 252 KSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRV 311
Query: 223 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF--GHLSEGAVDQYF-PPT 279
G P +G + + +++QN +N +++GAE+ G L +G YF PT
Sbjct: 312 GNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKG----YFARPT 367
Query: 280 VIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAA 339
+ +NV++ M + QEE FGP+M ++ +N +E +++AND++YGL V + ++A
Sbjct: 368 IFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVAR 427
Query: 340 QIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389
I+ G IN+ PFGG K SG GR G G+ VKS+
Sbjct: 428 SIEAGTVEINEAGRKPDL---PFGGYKQSGLGREWGDYGIEEFLEVKSIA 474
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508 | Back alignment and structure |
|---|
Score = 301 bits (774), Expect = 8e-98
Identities = 104/399 (26%), Positives = 161/399 (40%), Gaps = 39/399 (9%)
Query: 5 SLGEIMTTCEKITWLLSEGEKW---LKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNY 61
+ EI S + + P + +++ GVVG I WN+
Sbjct: 107 ANLEITLAGNITKESASFPGRVHGRISPSNTPGKENRVYRV------AKGVVGVISPWNF 160
Query: 62 PFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITG 118
P + P LA GN +VIK + + +G I G P ++ + G
Sbjct: 161 PLNLSIRSVAPALAV---GNAVVIKPASDTPVTG---GVIPARIFEEAGVPAGVISTVAG 214
Query: 119 FAET-GEALVSS--VDKIIFVGSPGVGRMIMRNA--SKTLTPVTLELGGKDAFIVCDDVD 173
G+ V+ I F GS VGR + A + V LELGG F+V D D
Sbjct: 215 AGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAINGGPMKTVALELGGNAPFVVLADAD 274
Query: 174 VPHVAQIAVRAALQS----SGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGK 229
+ A +AA GQ C R V ++ F+ + + VK++ G P A
Sbjct: 275 I----DAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDPSAEG 330
Query: 230 YDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMK 289
+G + L+ + A +GA + G + P V +V M+
Sbjct: 331 TLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPIE-------GRLVHPHVFSDVTSDME 383
Query: 290 LMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIN 349
+ +EE FGP++ ++K + + +LAN S +GL AV+S RA + A QI G+ IN
Sbjct: 384 IAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHIN 443
Query: 350 DFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 388
D N + FGG K+SG GRF G + + +
Sbjct: 444 DLTVNDEPH-VMFGGSKNSGLGRFNGDWAIEEFTTDRWI 481
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 300 bits (771), Expect = 5e-97
Identities = 108/346 (31%), Positives = 159/346 (45%), Gaps = 18/346 (5%)
Query: 49 PLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 105
P+GVVG I WN+PF + + G +V+K SE S + + + A
Sbjct: 161 PVGVVGIITPWNFPFIIASERVPWAIGS---GCTVVLKPSEFTSGTSIRLAELAREA--- 214
Query: 106 VGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162
G P+ + +V+TG+ G+ L VD + F GS VG + A++T+ V LELGG
Sbjct: 215 -GIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIAARTVKRVGLELGG 273
Query: 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 222
K IV D D+ A ++GQ C R V I + ++ I + V+
Sbjct: 274 KGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAF 333
Query: 223 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIV 282
G PL + +GA+ H+EK+ + V + GAE+L G G Y+ PTV
Sbjct: 334 GDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAG---LYYAPTVFA 390
Query: 283 NVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ 342
V M + +EE FGP++ + F T +E V LAN + +GL +V+S + A + +I+
Sbjct: 391 GVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETALQTIRRIR 450
Query: 343 CGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 388
G IN LP GG K SG GR G G K V
Sbjct: 451 AGRCWINSV--IDGTPELPIGGYKKSGLGRELGRYGFDEYSQFKGV 494
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498 | Back alignment and structure |
|---|
Score = 299 bits (767), Expect = 7e-97
Identities = 100/346 (28%), Positives = 161/346 (46%), Gaps = 19/346 (5%)
Query: 49 PLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 105
P+G+VG+I WNYP + P + GN +V K SE + R+I L
Sbjct: 161 PIGIVGSIAPWNYPLMMMAWKLAPAIGG---GNTVVFKPSEQTPLTALKLARLIADIL-- 215
Query: 106 VGAPENLVDVITGFAET-GEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162
PE +V+VITG ET G AL++ V + G G+ ++ A+KT+ LELGG
Sbjct: 216 ---PEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAAAKTVKRTHLELGG 272
Query: 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 222
K IV D D+ V ++GQ+C A R Y IY V+ + V ++
Sbjct: 273 KAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRY 332
Query: 223 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIV 282
+ ++G L +++ + V A D+ + G EG +F PTV+
Sbjct: 333 NLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGF---FFQPTVVA 389
Query: 283 NVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ 342
++++ E FGP++ + +F ++ V ANDS YGL +V++ +A A+++Q
Sbjct: 390 GATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAMRAASRLQ 449
Query: 343 CGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 388
G IN + +P GG+K SG+G+ V L V+ +
Sbjct: 450 YGCTWINTH--FMLTNEMPHGGIKQSGYGKDMSVYALEDYTAVRHI 493
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497 | Back alignment and structure |
|---|
Score = 297 bits (763), Expect = 3e-96
Identities = 113/349 (32%), Positives = 173/349 (49%), Gaps = 24/349 (6%)
Query: 49 PLGVVGAIVSWNYPFHNIFN---PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 105
+GVVG I WN+P + + P L A G +V+K SE A S + I+ A
Sbjct: 161 AIGVVGLITPWNWPMNQVTLKVIPALLA---GCTMVLKPSEIAPLSAMLFAEILDEA--- 214
Query: 106 VGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162
P + ++I G A G L + ++ I F GS G+ I +NAS TL V LELGG
Sbjct: 215 -ALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNASNTLKRVCLELGG 273
Query: 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 222
K A I+ D D+ + + VR +SGQ+C R V + IY + I +
Sbjct: 274 KGANIIFADADIDALQR-GVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQV 332
Query: 223 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILA--RGSFGHLSEGAVDQYF-PPT 279
GP +G + E +K+Q+L+ +D+GA ++ G + G Y+ PT
Sbjct: 333 GPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERG----YYVRPT 388
Query: 280 VIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAA 339
V +V M++ +EE FGP++ ++ FNT++E V LAND+ YGL + S + + R IAA
Sbjct: 389 VFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAA 448
Query: 340 QIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 388
Q++ G+ +N FGGVK SG R G+ G++ K++
Sbjct: 449 QVRSGMVEVNGHELPG---GSYFGGVKFSGRAREGGLWGIKEFLDTKAI 494
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495 | Back alignment and structure |
|---|
Score = 297 bits (762), Expect = 4e-96
Identities = 101/346 (29%), Positives = 165/346 (47%), Gaps = 19/346 (5%)
Query: 49 PLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 105
PLGVV +I WNYP P LAA GN +V+K SE + + +
Sbjct: 159 PLGVVASIAPWNYPLMMAAWKLAPALAA---GNCVVLKPSEITPLTALKLAELAKDIF-- 213
Query: 106 VGAPENLVDVITGFAET-GEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162
P +V+++ G +T G+ L V + GS G I+ + + ++ +ELGG
Sbjct: 214 ---PAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGG 270
Query: 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 222
K IV DD D+ V + ++GQ+C A R Y + IY V ++ V ++ +
Sbjct: 271 KAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKS 330
Query: 223 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIV 282
G P ++G L L H E++ V +A G + G G Y+ PT++
Sbjct: 331 GAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGY---YYAPTLLA 387
Query: 283 NVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ 342
++Q+E FGP++ + F+ +E+VV ANDS+YGL +V++ RA ++A++Q
Sbjct: 388 GALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQ 447
Query: 343 CGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 388
G +N + +P GG K SG+G+ + GL +V+ V
Sbjct: 448 YGCTWVNTH--FMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHV 491
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501 | Back alignment and structure |
|---|
Score = 297 bits (762), Expect = 6e-96
Identities = 112/348 (32%), Positives = 172/348 (49%), Gaps = 20/348 (5%)
Query: 49 PLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 105
P+GV G I+ WN+P P L+ GN +V+K +E + +I+ A
Sbjct: 159 PVGVCGQIIPWNFPLLMFLWKIGPALSC---GNTVVVKPAEQTPLTALHMGSLIKEA--- 212
Query: 106 VGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELG 161
G P +V+++ G+ T G A+ S VDK+ F GS VG++I A K+ L V+LELG
Sbjct: 213 -GFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELG 271
Query: 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 221
GK IV D D+ + + A + GQ C A R +V IY FV + + K
Sbjct: 272 GKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYV 331
Query: 222 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 281
G PL G E EK+ +L+ +GA++ G ++G + PTV
Sbjct: 332 LGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGG-PWGNKGY---FIQPTVF 387
Query: 282 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 341
+V M++ +EE FGP+ IMKF + ++V+K AN++ YGL +F+ +A +++ +
Sbjct: 388 SDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSAL 447
Query: 342 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389
Q G +N + + + PFGG K SG GR G G VK+V
Sbjct: 448 QSGTVWVNCY--SVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVT 493
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500 | Back alignment and structure |
|---|
Score = 295 bits (757), Expect = 3e-95
Identities = 122/348 (35%), Positives = 171/348 (49%), Gaps = 20/348 (5%)
Query: 49 PLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 105
P+GV G I+ WN+P P LA GN +V+KV+E + + +I+ A
Sbjct: 158 PVGVCGQIIPWNFPLLMQAWKLGPALAT---GNVVVMKVAEQTPLTALYVANLIKEA--- 211
Query: 106 VGAPENLVDVITGFAET-GEALVS--SVDKIIFVGSPGVGRMIMRNASKT-LTPVTLELG 161
G P +V+++ GF T G A+ S VDK+ F GS +GR+I A + L VTLELG
Sbjct: 212 -GFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELG 270
Query: 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 221
GK I+ D D+ + A A + GQ R +V DIY FV + KS
Sbjct: 271 GKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRV 330
Query: 222 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 281
G P K + G +K+ +N +GA++L G G + PTV
Sbjct: 331 VGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGG-IAADRGY---FIQPTVF 386
Query: 282 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 341
+V M + +EE FGP+M I+KF T EEVV AN+S YGL AVF+ +A ++ +
Sbjct: 387 GDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQAL 446
Query: 342 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389
Q G +N + + PFGG K SG GR G GL+A VK+V
Sbjct: 447 QAGTVWVNCY--DVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVT 492
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485 | Back alignment and structure |
|---|
Score = 290 bits (745), Expect = 1e-93
Identities = 113/390 (28%), Positives = 164/390 (42%), Gaps = 40/390 (10%)
Query: 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI-----HKKAKVEFHPLGVVGAIVSW 59
S E+ T + ++ G + K K+ PLGV+ +I +
Sbjct: 101 STIELEQTIAILDEAMTYT-------GELGGVKEVPSDIEGKTNKIYRLPLGVISSISPF 153
Query: 60 NYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVI 116
N+P + P +A GN +V K + SG II A G P +++V+
Sbjct: 154 NFPMNLSMRSIAPAIAL---GNSVVHKPDIQTAISG---GTIIAKAFEHAGLPAGVLNVM 207
Query: 117 TGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVD 173
E G+ ++++ I F GS VGR I A + + LELGG + F V D D
Sbjct: 208 LTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGRAFKRMALELGGNNPFAVLSDAD 267
Query: 174 VPHVAQIAVRAALQS----SGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGK 229
V AV AA+ GQ C R VH+D+Y FV + VK + G K
Sbjct: 268 V----DRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTDPK 323
Query: 230 YDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMK 289
+G L EK ++ A G E+ G V P V V ++ K
Sbjct: 324 TVVGPLINERQIEKALEIIEQAKTDGIELAVEGK-------RVGNVLTPYVFVGADNNSK 376
Query: 290 LMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIN 349
+ Q E F PI I+K +D+E + +AND+ YGL AVF+ + + A QI G+ +N
Sbjct: 377 IAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVN 436
Query: 350 DFASNYMCQSLPFGGVKDSGFGRFAGVEGL 379
D + N FGG K SG GRF +
Sbjct: 437 DQSVNDSPNI-AFGGNKASGVGRFGNPWVV 465
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505 | Back alignment and structure |
|---|
Score = 291 bits (746), Expect = 1e-93
Identities = 117/400 (29%), Positives = 181/400 (45%), Gaps = 40/400 (10%)
Query: 5 SLGEIMTTCEKITWLLSEGEKW--------LKPEYRSSGRSMIHKKAKVEFHPLGVVGAI 56
++GE+ T + I E + S +++ ++ PLGVV AI
Sbjct: 106 AIGEVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVERE------PLGVVLAI 159
Query: 57 VSWNYPF----HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENL 112
+NYP I P L GN +V K + S SG ++++A A GAPE +
Sbjct: 160 SPFNYPVNLAAAKIA-PALVT---GNTVVFKPATQGSLSG---IKMVEALADA-GAPEGI 211
Query: 113 VDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVC 169
+ V+TG G+ LV +D I F G G I A + PV LELGGKD IV
Sbjct: 212 IQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEKA--KMIPVVLELGGKDPAIVL 269
Query: 170 DDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGK 229
DD D+ A V A SGQ C +R +V + V+ + ++V+ ++ G P
Sbjct: 270 DDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGSPEDDA 329
Query: 230 YDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMK 289
D+ + + + +Q L++DAL+ GA +L+ +G PT++ +V M+
Sbjct: 330 -DITPVIDEKSAAFIQGLIDDALENGATLLSGNK----RQGN---LLSPTLLDDVTPAMR 381
Query: 290 LMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIN 349
+ EE FGP++PI++ E + L+N S YGL ++F+ RA I ++ G IN
Sbjct: 382 VAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHIN 441
Query: 350 DFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389
+ PF GVK SG G L + + V
Sbjct: 442 A-KTERGPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVTV 480
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517 | Back alignment and structure |
|---|
Score = 290 bits (745), Expect = 2e-93
Identities = 107/349 (30%), Positives = 170/349 (48%), Gaps = 22/349 (6%)
Query: 49 PLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 105
P+GV G ++ WNYP + LAA GN +VIK ++ + + + A
Sbjct: 178 PVGVCGIVIPWNYPLMMLSWKTAACLAA---GNTVVIKPAQVTPLTALKFAELTLKA--- 231
Query: 106 VGAPENLVDVITGFAET-GEALVS--SVDKIIFVGSPGVGRMIMRNASK-TLTPVTLELG 161
G P+ +V+++ G G+ L V KI F GS VG+ IM++ + + V+LELG
Sbjct: 232 -GIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELG 290
Query: 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 221
GK I+ D D+ Q+ + + + G+NC A R +V I+ FV +V + V+ +
Sbjct: 291 GKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMK 350
Query: 222 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 281
G PL + G H KL + +GA ++ G+ G +F PTV
Sbjct: 351 IGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN-QVPRPGF---FFQPTVF 406
Query: 282 VNVNHTMKLMQEEAFGPIMPIMKFNTD--EEVVKLANDSRYGLGCAVFSGSQHRAREIAA 339
+V M + +EE+FGPIM I +F + V+ AN + +GL VF+ ++A ++
Sbjct: 407 TDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSD 466
Query: 340 QIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 388
++Q G IN + N + PFGG K SGFG+ G L +K+V
Sbjct: 467 KLQAGTVFINTY--NKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTV 513
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515 | Back alignment and structure |
|---|
Score = 289 bits (742), Expect = 7e-93
Identities = 113/368 (30%), Positives = 172/368 (46%), Gaps = 30/368 (8%)
Query: 49 PLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 105
P G VG I WN P P LA GN +V+K +E + ++ I++ A
Sbjct: 162 PAGPVGIITPWNAPLMLSTWRIAPALAF---GNTVVLKPAEWSPFTATKLAEILKEA--- 215
Query: 106 VGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162
P + +++ GF E G ALV+ V + G G+++MRNA+ L ++ ELGG
Sbjct: 216 -DLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLKRLSPELGG 274
Query: 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 222
K +V D D+ V +G+ C + R V I+ FV +V + +++
Sbjct: 275 KSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRV 334
Query: 223 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG-------SFGHLSEGAVDQY 275
G PL + ++G L EH +++ V +GA +L G LS G Y
Sbjct: 335 GHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRG---NY 391
Query: 276 FPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAR 335
PTV V NH MK+ QEE FGP++ + F +EE ++ AND++YGL VF+ RA
Sbjct: 392 LLPTVFVGENH-MKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLERAH 450
Query: 336 EIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWP 395
+A +++ G+ +N N PFGGVK SG R G L +K++ P
Sbjct: 451 RLALELEAGMVYLNSH--NVRHLPTPFGGVKGSGDRREGGTYALDFYTDLKTI----ALP 504
Query: 396 YIKTKIPK 403
+PK
Sbjct: 505 LRPPHVPK 512
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486 | Back alignment and structure |
|---|
Score = 287 bits (736), Expect = 2e-92
Identities = 104/338 (30%), Positives = 167/338 (49%), Gaps = 23/338 (6%)
Query: 49 PLGVVGAIVSWNYPF----HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALA 104
P+G+VGAI +N+P H I P +A GN IV S A +II+ AL
Sbjct: 130 PVGIVGAITPFNFPLNLSAHKI-APAIAT---GNVIVHHPSSKAPLVCIELAKIIENALK 185
Query: 105 AVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161
P + +++TG E G+ +V + V+ I F GS VG +I + A + LELG
Sbjct: 186 KYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG--FKKIALELG 243
Query: 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 221
G + IV D D+ ++ + +GQ C V I F+ K ++
Sbjct: 244 GVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLN 303
Query: 222 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 281
G PL K D+G L +EH+E ++ +V A+D+G ++L G F PT++
Sbjct: 304 VGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGK-------RDKALFYPTIL 356
Query: 282 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 341
V+ L + E F P++PI++ +EE++ +AN + YGL A+F+ +++ + A +
Sbjct: 357 -EVDRDNILCKTETFAPVIPIIRT-NEEEMIDIANSTEYGLHSAIFTNDINKSLKFAENL 414
Query: 342 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGL 379
+ G IND +S + ++PFGGVK SG GR +
Sbjct: 415 EFGGVVIND-SSLFRQDNMPFGGVKKSGLGREGVKYAM 451
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475 | Back alignment and structure |
|---|
Score = 286 bits (735), Expect = 3e-92
Identities = 125/397 (31%), Positives = 188/397 (47%), Gaps = 34/397 (8%)
Query: 5 SLGEIMTTCEKITWLLSE-----GEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSW 59
++ E++ T E I + E GE + ++ + K A V P+G+V AI +
Sbjct: 97 AVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASK---KKIAVVRREPVGLVLAISPF 153
Query: 60 NYPF----HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDV 115
NYP I P L A GN I K S SG + +A A G P + +
Sbjct: 154 NYPVNLAGSKIA-PALIA---GNVIAFKPPTQGSISG---LLLAEAFAEA-GLPAGVFNT 205
Query: 116 ITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV 172
ITG E G+ +V V+ I F GS G+G I + A + P+ LELGGKD+ IV +D
Sbjct: 206 ITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLELGGKDSAIVLEDA 263
Query: 173 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDM 232
D+ A+ + A SGQ C +R V + V ++ + V +++ G P D+
Sbjct: 264 DLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDA-DI 322
Query: 233 GALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQ 292
L + ++ ++ L+NDA DKGA L EG P + V M+L
Sbjct: 323 TPLIDTKSADYVEGLINDANDKGATALTEIK----REGN---LICPILFDKVTTDMRLAW 375
Query: 293 EEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFA 352
EE FGP++PI++ + EE ++++N S YGL ++F+ RA IA Q++ G IN+
Sbjct: 376 EEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINN-K 434
Query: 353 SNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389
+ + PF G K SG G + A VKSVV
Sbjct: 435 TQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVV 471
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501 | Back alignment and structure |
|---|
Score = 284 bits (730), Expect = 2e-91
Identities = 94/350 (26%), Positives = 147/350 (42%), Gaps = 26/350 (7%)
Query: 49 PLGVVGAIVSWNYPF----HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALA 104
PLGVV AI +NYP + I GN +V+K S + + + A
Sbjct: 157 PLGVVAAITPFNYPLFDAVNKIT-YSFIY---GNAVVVKPSISDPLPAAMAVKALLDA-- 210
Query: 105 AVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162
G P + + ++ + E +V+ V + F GS VG +++ + +ELGG
Sbjct: 211 --GFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVG--GVKQYVMELGG 266
Query: 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 222
D IV +D D+ A R +GQ C + R +Y V +VAK + S+
Sbjct: 267 GDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRV 326
Query: 223 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI- 281
G P D+G L +++ + DA++KG +LA G G Y PT +
Sbjct: 327 GDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGR----RLGP--TYVQPTFVE 380
Query: 282 --VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAA 339
+ M L + E F P+ ++ ++ ++LAN YGL AVF + R
Sbjct: 381 APADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVR 440
Query: 340 QIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389
++ G IND + PFGG K SG R + A K++V
Sbjct: 441 LLEVGAIYIND-MPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIV 489
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538 | Back alignment and structure |
|---|
Score = 280 bits (718), Expect = 5e-89
Identities = 93/384 (24%), Positives = 168/384 (43%), Gaps = 27/384 (7%)
Query: 43 AKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAA 102
+ + P+GV I WN+ + +A + +GN +V+K + + +++ A
Sbjct: 166 NRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDA 225
Query: 103 LAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASK------TL 153
G P+ +++ + G G+ LV I F GS VG + A+ L
Sbjct: 226 ----GLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHL 281
Query: 154 TPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQV 213
V +E+GGKD +V D D+ A+ + +A SGQ C+ R +H+D+Y + +
Sbjct: 282 KRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKT 341
Query: 214 AKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVD 273
+ K+++ G P MG + + EK+ + + +G ++ G G S G
Sbjct: 342 VALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGE-GDSSTG--- 396
Query: 274 QYF-PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQH 332
+F PT+I +++ +MQEE FGP++ K N + +++AN++ YGL AV + ++
Sbjct: 397 -FFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRA 455
Query: 333 RAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKSVVED 391
+ + G N + + PFGG K SG + G + L K+V E
Sbjct: 456 HIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQAKTVSEM 515
Query: 392 ----RWWPYIKTKIPKPIQYPVAE 411
++ +P E
Sbjct: 516 YAENLYFQSHHH--HHHWSHPQFE 537
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490 | Back alignment and structure |
|---|
Score = 276 bits (708), Expect = 4e-88
Identities = 89/398 (22%), Positives = 165/398 (41%), Gaps = 33/398 (8%)
Query: 5 SLGEIMTTCEKITWLLSEGEKWL--KPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYP 62
S E+ + K+ + + K + +++ K P GVV +N+P
Sbjct: 99 SATEVTSMVNKVAISVQAFRERTGEKSGPLADATAVLRHK------PHGVVAVFGPYNFP 152
Query: 63 FHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 119
H P L A GN +V K SE + A G P +++++ G
Sbjct: 153 GHLPNGHIVPALLA---GNCVVFKPSELTPKVAELTLKAWIQA----GLPAGVLNLVQGG 205
Query: 120 AETGEALVSS--VDKIIFVGSPGVGRMIMRN-ASKTLTPVTLELGGKDAFIVCDDVDVPH 176
ETG AL + +D + F GS G ++ + + LE+GG + +V + D+
Sbjct: 206 RETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKILALEMGGNNPLVVEEVADLDA 265
Query: 177 VAQIAVRAALQSSGQNCAGAERFYVHRDIYA-LFVSQVAKIVKSVSAGPPLA-GKYDMGA 234
+++A S+GQ C A R V + + ++++ + ++ G MGA
Sbjct: 266 AVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPAPFMGA 325
Query: 235 LCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 294
+ L +E L + KGA+ L + +GA P ++ +V+ + EE
Sbjct: 326 VISLSAAEHLLKAQEHLIGKGAQPLLAMT--QPIDGA--ALLTPGIL-DVSAVAERPDEE 380
Query: 295 AFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIND--FA 352
FGP++ +++++ ++ AN ++YGL + S S+ R + + + G+ N
Sbjct: 381 FFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTG 440
Query: 353 SNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 390
+ S PFGG+ SG R + C + +E
Sbjct: 441 AAS---SAPFGGIGASGNHRPSAYYAADYCAYPVASLE 475
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500 | Back alignment and structure |
|---|
Score = 269 bits (689), Expect = 3e-85
Identities = 86/350 (24%), Positives = 145/350 (41%), Gaps = 19/350 (5%)
Query: 48 HPLGVVGAIVSWNYPFHNIF-NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 106
+P+G+VG I ++N+P N +A + GN + K + S +II L
Sbjct: 156 NPVGLVGIITAFNFPVAVYGWNNAIAMI-CGNVCLWKGAPTTSLISVAVTKIIAKVLEDN 214
Query: 107 GAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD 164
P + + G A+ G A+ V+ + F GS VG+ + + LELGG +
Sbjct: 215 KLPGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQERFGRSLLELGGNN 274
Query: 165 AFIVCDDVDVPHVAQIAVRAALQS----SGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 220
A I +D D+ + V +AL + +GQ C A R ++H I+ V+++ K +
Sbjct: 275 AIIAFEDADL----SLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQI 330
Query: 221 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTV 280
G P G L + V +A +G ++ G + Y PT+
Sbjct: 331 RVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGG--KVMDRPG--NYVEPTI 386
Query: 281 IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRARE--IA 338
+ + H + E F PI+ + KF +EEV N+ + GL ++F+ R
Sbjct: 387 VTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGP 446
Query: 339 AQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 388
CG+ +N S FGG K +G GR +G + + +
Sbjct: 447 KGSDCGIVNVNIPTSGAEIG-GAFGGEKHTGGGRESGSDAWKQYMRRSTC 495
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479 | Back alignment and structure |
|---|
Score = 265 bits (681), Expect = 3e-84
Identities = 118/393 (30%), Positives = 184/393 (46%), Gaps = 45/393 (11%)
Query: 5 SLGEIMTTCEKITWLLSE-----GEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSW 59
+ E+ T + I ++ GE + R ++ K+ LGV I+ W
Sbjct: 101 AEVEVAFTADYIDYMAEWARRYEGE--IIQSDRPGENILLFKR------ALGVTTGILPW 152
Query: 60 NYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA-VGAPENLVDV 115
N+PF I P L GN IVIK SE + I A + +G P + ++
Sbjct: 153 NFPFFLIARKMAPALLT---GNTIVIKPSEFTPNNA-----IAFAKIVDEIGLPRGVFNL 204
Query: 116 ITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV 172
+ G G+ L + V + GS G IM A+K +T V LELGGK IV DD
Sbjct: 205 VLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPAIVMDDA 264
Query: 173 DVPHVAQIAVRAALQS----SGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL-A 227
D+ AV+A + S SGQ C AER YV + IY FV+++ + +++V G P
Sbjct: 265 DLEL----AVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAER 320
Query: 228 GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHT 287
MG L E+++ V A+++GA + G +G Y+PPT++++V
Sbjct: 321 NDIAMGPLINAAALERVEQKVARAVEEGARVAFGGK-AVEGKG---YYYPPTLLLDVRQE 376
Query: 288 MKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAA 347
M +M EE FGP++P++ F+T E+ + +ANDS YGL ++++ + + A + ++ G
Sbjct: 377 MSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETY 436
Query: 348 INDFA-SNYMCQSLPFGGVKDSGFGRFAGVEGL 379
IN G + SG G G GL
Sbjct: 437 INRENFEAMQG---FHAGWRKSGIGGADGKHGL 466
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516 | Back alignment and structure |
|---|
Score = 261 bits (670), Expect = 3e-82
Identities = 100/355 (28%), Positives = 152/355 (42%), Gaps = 22/355 (6%)
Query: 48 HPLGVVGAIVSWNYPFHNIFNPML-AAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 106
PLG I WN+P IF M+ V GN ++ K +E+A G F I A
Sbjct: 172 VPLGAGVVIAPWNFPV-AIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEA---- 226
Query: 107 GAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKT------LTPVT 157
G P +V+ + G E G LV + I F GS VG I A +
Sbjct: 227 GFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAY 286
Query: 158 LELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 217
+E GGK+A IV + D A+ V +A GQ C+ A R + + Y + +V K
Sbjct: 287 VETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRA 346
Query: 218 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFP 277
+ +S GP D+G + E K+ + + ++G +L EG +
Sbjct: 347 ERLSVGPAEENP-DLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLE--GEGY---FIA 400
Query: 278 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREI 337
PTV V ++ QEE FGP++ +++ E +++AND+ YGL V+S +
Sbjct: 401 PTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWA 460
Query: 338 AAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG-VEGLRACCLVKSVVED 391
+ G N + + PFGG K SG G ++ LR +K+V E
Sbjct: 461 RREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAER 515
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534 | Back alignment and structure |
|---|
Score = 261 bits (670), Expect = 5e-82
Identities = 58/376 (15%), Positives = 122/376 (32%), Gaps = 47/376 (12%)
Query: 49 PLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 105
GV I ++N+P + P L + G +++K + +W R++ + A
Sbjct: 151 TRGVALFINAFNFPSWGLWEKAAPALLS---GVPVIVKPATATAWLT---QRMVADVVDA 204
Query: 106 VGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKT--LTPVTLELG 161
P + +I G + L S D + F GS + + + + ++
Sbjct: 205 GILPPGALSIICGSS--AGLLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVQAD 262
Query: 162 GKDAFIVCDDVDVPHV-----AQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 216
++ I+C D + VR SGQ C R +V + +
Sbjct: 263 SLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAK 322
Query: 217 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF----GHLSEGAV 272
+ ++ G P MG+L E E + + ++ + + A
Sbjct: 323 LAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAA- 381
Query: 273 DQYFPPTV--IVNVNHTMKLMQEEAFGPIMPIMKFNT--------DEEVVKLANDSRYGL 322
P + + + ++ L E FGP+ + + + V LA + L
Sbjct: 382 --CVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSL 439
Query: 323 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQS---------LPFGGVKDSGFGR- 372
+++S +A ++ ++ + + GG +G G
Sbjct: 440 VASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGNVMPMSLHGGPGRAGGGEE 499
Query: 373 FAGVEGLRACCLVKSV 388
G+ L ++
Sbjct: 500 LGGLRALAFYHRRSAI 515
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497 | Back alignment and structure |
|---|
Score = 259 bits (665), Expect = 1e-81
Identities = 100/339 (29%), Positives = 160/339 (47%), Gaps = 19/339 (5%)
Query: 49 PLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 105
P GVV I +WN+P P L GN +V+K ++ + +A
Sbjct: 148 PRGVVVGITAWNFPLALAGRKIGPALIT---GNTMVLKPTQETPLAT-----TELGRIAK 199
Query: 106 -VGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161
G P+ +++VI G G+ L S I GS G+ I + +++ +TPV LELG
Sbjct: 200 EAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEYMTPVMLELG 259
Query: 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 221
GK +V DD D+ A+ A+ + GQ C ER YVH +Y F+++ +VK +
Sbjct: 260 GKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLK 319
Query: 222 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 281
G P+ MG C + + ++V++A+ +GA + G + ++ PTV+
Sbjct: 320 VGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVL 379
Query: 282 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 341
V+V ++ EE FGPI+PI+K ++ E+ ++ NDS YGL V + S + + +
Sbjct: 380 VDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDL 439
Query: 342 QCGVAAIND-FASNYMCQSLPFGGVKDSGFGRFAGVEGL 379
+ G IN + G K SGFG G GL
Sbjct: 440 EVGEVYINRGMGEQHQG---FHNGWKQSGFGGEDGKFGL 475
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469 | Back alignment and structure |
|---|
Score = 256 bits (656), Expect = 1e-80
Identities = 109/394 (27%), Positives = 178/394 (45%), Gaps = 17/394 (4%)
Query: 3 DASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYP 62
+A E++ E+I +++ + +W E + + PLGVV I +WNYP
Sbjct: 74 NAYYEEVVYVLEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYP 133
Query: 63 FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET 122
F+ PM+ A+ +GN +V+K SE + II L ++L VI G
Sbjct: 134 FNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQYL-----DKDLYPVINGGVPE 188
Query: 123 GEALVSS-VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIA 181
L+ D I++ GS GVG++IM A+K LTPVTLELGGK V + D+ +
Sbjct: 189 TTELLKERFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRI 248
Query: 182 VRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241
+SGQ C + I V ++ K +K + D G + H
Sbjct: 249 AWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFYGEDAKKSR-DYGRIISARHF 307
Query: 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMP 301
+++ L+ +G ++ G+ A +Y PT++ +V+ +MQEE FGP++P
Sbjct: 308 QRVMGLI-----EGQKVAYGGTG-----DAATRYIAPTILTDVDPQSPVMQEEIFGPVLP 357
Query: 302 IMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLP 361
I+ + EE ++ N L +FS + +++ A+ G A ND + SLP
Sbjct: 358 IVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLP 417
Query: 362 FGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWP 395
FGGV +SG G + G + +S +
Sbjct: 418 FGGVGNSGMGSYHGKKSFETFSHRRSCLVRPLMN 451
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481 | Back alignment and structure |
|---|
Score = 249 bits (639), Expect = 5e-78
Identities = 107/339 (31%), Positives = 168/339 (49%), Gaps = 23/339 (6%)
Query: 49 PLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 105
P+GV AI WN+P I P LAA G +V+K + +S + A LA
Sbjct: 145 PIGVTAAITPWNFPAAMITRKAGPALAA---GCTMVLKPASQTPFSA-----LALAELAI 196
Query: 106 -VGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161
G P + +V+TG A G L S+ V K+ F GS +GR +M +K + V+LELG
Sbjct: 197 RAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELG 256
Query: 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 221
G FIV DD D+ + A+ + +++GQ C A R YV +Y F ++ + + +
Sbjct: 257 GNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLH 316
Query: 222 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 281
G L +G L + K++ + DAL+KGA ++ G +F PT++
Sbjct: 317 IGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGG----NFFQPTIL 372
Query: 282 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 341
V+V K+ +EE FGP+ P+ +F + +V+ AND+ +GL ++ R + +
Sbjct: 373 VDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEAL 432
Query: 342 QCGVAAIND-FASNYMCQSLPFGGVKDSGFGRFAGVEGL 379
+ G+ IN SN + PFGG+K SG GR G+
Sbjct: 433 EYGIVGINTGIISNEVA---PFGGIKASGLGREGSKYGI 468
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506 | Back alignment and structure |
|---|
Score = 249 bits (639), Expect = 1e-77
Identities = 112/339 (33%), Positives = 171/339 (50%), Gaps = 22/339 (6%)
Query: 49 PLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 105
P+GV G IV WN+P I + LAA G VIK + + I ++
Sbjct: 147 PVGVTGLIVPWNFPIGMIAKKLSAALAA---GCPSVIKPASETPLTM-----IAFFSVMD 198
Query: 106 -VGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161
+ P+ +V+++ G A G+ L V + F GS VGR ++ + ++ + + LELG
Sbjct: 199 KLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTAEQVKKLALELG 258
Query: 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 221
G FIV DD D+ A + + GQ C A R +VH + F ++A+ V ++
Sbjct: 259 GNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMT 318
Query: 222 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 281
G + D+G L + +K++ + DALDKGA ++A L +G +FPPTV+
Sbjct: 319 VGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDG---LFFPPTVV 375
Query: 282 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 341
V+ M QEE FGP++P+ F T+EEV+ ND+ +GL VF+ RA+ +AA +
Sbjct: 376 QGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTADAERAQRVAAGL 435
Query: 342 QCGVAAIND-FASNYMCQSLPFGGVKDSGFGRFAGVEGL 379
+ G N PFGG+K SG GR G+EGL
Sbjct: 436 RFGHVGWNTGTGPTPEA---PFGGMKASGIGREGGLEGL 471
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484 | Back alignment and structure |
|---|
Score = 248 bits (635), Expect = 2e-77
Identities = 115/339 (33%), Positives = 176/339 (51%), Gaps = 23/339 (6%)
Query: 49 PLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 105
P+GV AI WN+P I P LAA G IV+K +E+ +S + A LA
Sbjct: 148 PIGVCAAITPWNFPAAMIARKVGPALAA---GCPIVVKPAESTPFSA-----LAMAFLAE 199
Query: 106 -VGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161
G P+ ++ V+ G G + S+ V K+ F GS VGR++M ++ T+ +TLELG
Sbjct: 200 RAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPTVKKLTLELG 259
Query: 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 221
G FIV DD D+ + A+ + +++GQ C RF+VH +Y F ++A V +
Sbjct: 260 GNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLK 319
Query: 222 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 281
G +G L +K+++ + DAL KGA ++ G L +F PTV+
Sbjct: 320 VGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGH----GFFEPTVL 375
Query: 282 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 341
V M + +EE FGP+ P+ +F ++EE+V+LAND+ +GL ++S R +A +
Sbjct: 376 TGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRVAEAL 435
Query: 342 QCGVAAIND-FASNYMCQSLPFGGVKDSGFGRFAGVEGL 379
+ G+ IN SN + PFGGVK SG GR G+
Sbjct: 436 EYGMVGINTGLISNEVA---PFGGVKQSGLGREGSHYGI 471
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457 | Back alignment and structure |
|---|
Score = 246 bits (629), Expect = 7e-77
Identities = 108/390 (27%), Positives = 161/390 (41%), Gaps = 20/390 (5%)
Query: 3 DASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYP 62
L EI +I + L+ ++W+ P S + + V P GV I +NYP
Sbjct: 84 VVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYP 143
Query: 63 FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET 122
+ P++ A+ GN +IK SE + +II A V VI G +
Sbjct: 144 VNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAF-----APEYVAVIQGGRDE 198
Query: 123 GEALVSS-VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIA 181
L+S D I F GSP VG+++M+ A+K LTPV LELGGK IV D D+
Sbjct: 199 NSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADLDQTVNQL 258
Query: 182 VRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241
+ +SGQ + YVH + + ++ + VK+ G L
Sbjct: 259 MFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTELPEIN-----STGKLVTERQV 313
Query: 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMP 301
++L +L+ ++L + TV+ V LM EE FGPI+P
Sbjct: 314 QRLVSLLEAT---QGQVLVGSQA-----DVSKRALSATVVDGVEWNDPLMSEELFGPILP 365
Query: 302 IMKFNTDEEVVKLANDSR-YGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSL 360
+++F++ + N L VF A+ I QIQ G A +N + L
Sbjct: 366 VLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYL 425
Query: 361 PFGGVKDSGFGRFAGVEGLRACCLVKSVVE 390
PFGG+ SG G + G KSV
Sbjct: 426 PFGGIGASGMGEYHGHFSYLTFTHKKSVRI 455
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487 | Back alignment and structure |
|---|
Score = 245 bits (627), Expect = 4e-76
Identities = 109/343 (31%), Positives = 172/343 (50%), Gaps = 27/343 (7%)
Query: 49 PLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 105
P+GV I WN+P I LAA G +V+K +E+ +S + A LA+
Sbjct: 146 PIGVAAVITPWNFPSAMITRKVGAALAA---GCTVVVKPAEDTPFSA-----LALAELAS 197
Query: 106 -VGAPENLVDVITGF----AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTL 158
G P + +VI E GEA+ + V KI F GS G++++ +A+ ++ V++
Sbjct: 198 QAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVKRVSM 257
Query: 159 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQ-VAKIV 217
ELGG FIV D +V A+ + +++GQ C + +F V R I+ FV +
Sbjct: 258 ELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMK 317
Query: 218 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFP 277
K++ G G L + EK++ VNDA+ KGA ++ G L + +F
Sbjct: 318 KNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGK----NFFE 373
Query: 278 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREI 337
PT++ NV M EE FGP+ P++KF+T+EE + +AN + GL +S + +
Sbjct: 374 PTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRV 433
Query: 338 AAQIQCGVAAIND-FASNYMCQSLPFGGVKDSGFGRFAGVEGL 379
A Q++ G+ +N+ S+ C PFGGVK SG GR G+
Sbjct: 434 AEQLEVGMVGVNEGLISSVEC---PFGGVKQSGLGREGSKYGI 473
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504 | Back alignment and structure |
|---|
Score = 245 bits (627), Expect = 6e-76
Identities = 107/339 (31%), Positives = 171/339 (50%), Gaps = 25/339 (7%)
Query: 49 PLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 105
P+GV AI WN+P I P LAA G ++++ ++ + + LA
Sbjct: 168 PVGVTAAITPWNFPAAMITRKAAPALAA---GCTMIVRPADLTPLTA-----LALGVLAE 219
Query: 106 -VGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161
G P ++ ++TG A E G L S+ V K+ F GS VGR++M + T+ ++LELG
Sbjct: 220 KAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTIKRISLELG 279
Query: 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 221
G FIV DD D+ A+ + +++GQ C A R YV R +Y F ++A VK +
Sbjct: 280 GNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELK 339
Query: 222 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 281
G +G + + K++ + DA+ KGA+++ G G +F P ++
Sbjct: 340 VGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGK----ELGG--LFFEPGIL 393
Query: 282 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 341
V M + +EE FGP+ P+ F+T+EEV+ AND+ +GL ++ + RA ++ +
Sbjct: 394 TGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEAL 453
Query: 342 QCGVAAIND-FASNYMCQSLPFGGVKDSGFGRFAGVEGL 379
+ G+ N SN + PFGGVK SG GR G+
Sbjct: 454 EYGMVGHNTGLISNEVA---PFGGVKQSGLGREGSKYGI 489
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026 | Back alignment and structure |
|---|
Score = 233 bits (596), Expect = 5e-68
Identities = 87/345 (25%), Positives = 148/345 (42%), Gaps = 20/345 (5%)
Query: 41 KKAKVEFHPLGVVGAIVSWNYPFHNIFN-PMLAAVFSGNGIVIKVSENASWSGCFYFRII 99
+ + P GV I WN+P I AA+ +GN +V K S S G +
Sbjct: 658 ELNHYFYEPKGVAAVIAPWNFPL-AISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELF 716
Query: 100 QAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKT---- 152
+ A G PE + + G + G+ LV + I F GS G I+ A+K
Sbjct: 717 REA----GLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQ 772
Query: 153 --LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFV 210
+ + E+GGK+A I+ DD D+ + +A GQ C+ R V +Y F+
Sbjct: 773 ANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFI 832
Query: 211 SQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEG 270
++ + K+ GP MGA+ + + ++ +G + EG
Sbjct: 833 ERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREGHVLYESPV--PAGEG 890
Query: 271 AVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGS 330
+ P T+I + ++ QEE FGP++ +M+ ++ ++ AN +++ L +FS S
Sbjct: 891 ---YFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRS 947
Query: 331 QHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG 375
+ + + G IN + + + PFGG + SG G AG
Sbjct: 948 PEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAG 992
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001 | Back alignment and structure |
|---|
Score = 216 bits (551), Expect = 6e-62
Identities = 83/339 (24%), Positives = 137/339 (40%), Gaps = 20/339 (5%)
Query: 44 KVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 103
+ GV AI WN+P + AA+ +GN +V K +E ++ A
Sbjct: 644 ALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEA- 702
Query: 104 AAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKT---LTPVTL 158
G P++ + ++TG G AL + + ++F GS V R I R + + P+
Sbjct: 703 ---GIPKSALYLVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIA 759
Query: 159 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 218
E GG +A I VA V +A +S+GQ C+ +V D+ + VA +
Sbjct: 760 ETGGINAMIADATALPEQVADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAAR 819
Query: 219 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPP 278
+ G P +G + +E ++L + + A G EG + P
Sbjct: 820 ELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEARLHFA----GPAPEG---CFVAP 872
Query: 279 TVIVNVNHTMKLMQEEAFGPIMPIMKFNTD--EEVVKLANDSRYGLGCAVFSGSQHRARE 336
+ + EE FGPI+ ++++ + E V++ + YGL V S
Sbjct: 873 HIFELTEAGQ--LTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEA 930
Query: 337 IAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG 375
I ++Q G +N + PFGG SG G AG
Sbjct: 931 IIDRVQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAG 969
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510 | Back alignment and structure |
|---|
Score = 201 bits (513), Expect = 3e-59
Identities = 55/353 (15%), Positives = 114/353 (32%), Gaps = 38/353 (10%)
Query: 49 PLGVVGAIVSWNYPFHNI-----FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 103
LG V + N+P LAA G +++K + I+ AL
Sbjct: 136 ALGPVAVFGASNFPLAFSAAGGDTASALAA---GCPVIVKGHTAHPGTSQIVAECIEQAL 192
Query: 104 AAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVT--L 158
P+ + ++ G G+ALVS + + F GS G GR + A + P+
Sbjct: 193 KQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPIPFYG 252
Query: 159 ELGGKDAFIVCDDVDV--PHVAQIAVRAALQSSGQNCAGAERFYVHRDIYA-LFVSQVAK 215
ELG + + +A V + GQ C + F+
Sbjct: 253 ELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQS 312
Query: 216 IVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQY 275
+++ S + + ++ + D G ++ + A+ +
Sbjct: 313 LIRQQSPST------LLTPGIRDSYQSQVVSR---GSDDGIDVTFSQAESPCVASAL--F 361
Query: 276 FPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ--HR 333
+ + +EE FGP I+ +++ L+ L + + + +
Sbjct: 362 VTSSENWRKHP---AWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQ 418
Query: 334 AREIAAQIQ--CGVAAINDFASNYM-CQSLPFGGVKDS---GFGRFAGVEGLR 380
++ +++ G N + + ++ GG + G E +
Sbjct: 419 VSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAEAIH 471
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 186 bits (473), Expect = 2e-53
Identities = 68/402 (16%), Positives = 118/402 (29%), Gaps = 55/402 (13%)
Query: 7 GEIMTTCEKITWLLSEGEK--WLK-------PEYRSSGRSMIHKKAKVEFHPLGVVGAIV 57
GE T ++ EK +L PE + + R I ++ P+G V
Sbjct: 122 GERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEI----RLVQRPVGPVAVFG 177
Query: 58 SWNYPFHNI-----FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENL 112
+ N+P LAA G +V+K +G + AA+ G +
Sbjct: 178 ASNFPLAFSTAGGDTAAALAA---GCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGV 234
Query: 113 VDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPV--TLELGGKDAFI 167
+I G + + G ALV + + F GS GR + + P+ ELG +
Sbjct: 235 FSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPIPFFGELGSVNPMF 294
Query: 168 VCDDVDVPHVAQIA---VRAALQSSGQNCAGAERFYVHRDI-YALFVSQVAKIVKSVSAG 223
+ + + + +GQ C V F + + + V+
Sbjct: 295 LLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADADRFTTAAVEALAKVAPQ 354
Query: 224 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVN 283
L A + L S G
Sbjct: 355 TMLTDGIAKA---------YRDGQARFATRNAVKPLLATE----SSGRDASPNLFETTGA 401
Query: 284 VNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGS----QHRAREIAA 339
+ EE FGP+ +++ + E+ +LA + L + + R
Sbjct: 402 QFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVL 461
Query: 340 QIQCGVAAINDF-----ASNYMCQSLPFGGVKDSGFGRFAGV 376
+ + G +N F + M G S V
Sbjct: 462 ERKAGRVLVNGFPTGVEVVDSMV---HGGPYPASTNFGATSV 500
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464 | Back alignment and structure |
|---|
Score = 183 bits (467), Expect = 5e-53
Identities = 59/334 (17%), Positives = 107/334 (32%), Gaps = 30/334 (8%)
Query: 49 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 108
PLGVV ++ P + L ++ +GN IV NA + RII A G
Sbjct: 108 PLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGC 167
Query: 109 PENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 165
P+ + +T + + L+ I+ G + + + TP G
Sbjct: 168 PKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAMVKAAYSSG----TPAIGVGPGNGP 223
Query: 166 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 225
+ ++P + + + +G CA + V R +A+ K +
Sbjct: 224 AFIERSANIPRAVKHILDSKTFDNGTICASEQSVVVERVNKEAV---IAEFRKQGAHFLS 280
Query: 226 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVN 285
A +G L + +V ++ A + + A T V
Sbjct: 281 DAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLT----VPADARVLIAEET---KVG 333
Query: 286 HTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRY----GLGCAVFSGSQHRAREIAAQI 341
+ +E+ PI+ T +E +L+ D Y G + S + RE A +
Sbjct: 334 AKIPYSREK-LAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKK 392
Query: 342 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG 375
+N GG+ + A
Sbjct: 393 PVSRLLVN--------TPGALGGIGATTNLVPAL 418
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452 | Back alignment and structure |
|---|
Score = 179 bits (456), Expect = 1e-51
Identities = 53/335 (15%), Positives = 114/335 (34%), Gaps = 45/335 (13%)
Query: 49 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 108
P+G++ IV P L ++ + NGI+ A S +++ A A GA
Sbjct: 103 PVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGA 162
Query: 109 PENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 165
P++++ I + E AL+ + I+ G PG+ + + P G
Sbjct: 163 PKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVKAAY----SSGKPAIGVGAGNVP 218
Query: 166 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 225
++ + D+ + + +G CA + V ++Y + A
Sbjct: 219 VVIDETADIKRAVASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFAS---------- 268
Query: 226 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGA---VDQ---YFPPT 279
+ + ++K++ ++ A+I+ + ++E A V
Sbjct: 269 -HKAH----VLSKTDADKVRKVLLIDGALNAKIVGQ-PATAIAEMAGVKVPADTKVLIGE 322
Query: 280 VIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLA----NDSRYGLGCAVFSGSQ---H 332
+ V++ E+ P + + + + E+ V A G +++
Sbjct: 323 GLGKVSYDDAFAHEK-LSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNAD 381
Query: 333 RAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKD 367
R R +++ IN GG+ D
Sbjct: 382 RIRYFGDKMKTARILIN--------IPTTHGGIGD 408
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563 | Back alignment and structure |
|---|
Score = 157 bits (399), Expect = 1e-42
Identities = 84/350 (24%), Positives = 147/350 (42%), Gaps = 28/350 (8%)
Query: 44 KVEFHPL-GVVGAIVSWNYPFHNIF-NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 101
+ L G V AI +N F I N A GN ++ K S+ A + +RI++
Sbjct: 194 HTVYRGLEGFVAAISPFN--FTAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRILRE 251
Query: 102 ALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNAS------KT 152
A G P N++ + T G+ + SS + I F GS + + R + +T
Sbjct: 252 A----GLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRT 307
Query: 153 LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQ 212
+ E GGK+ V DV V +R+A + GQ C+ R YV + ++ +
Sbjct: 308 FPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGR 367
Query: 213 VAKIVKSVSAGPPLAG-KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGA 271
+ + + G P A+ + +++ + A + + G + S G
Sbjct: 368 LLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVG- 426
Query: 272 VDQYF-PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD--EEVVKLAND-SRYGLGCAVF 327
Y+ P +I + + +M+EE FGP++ + + D E +KL + + YGL AVF
Sbjct: 427 ---YYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVF 483
Query: 328 SGSQHRAREIAAQIQCGV--AAINDFASNYMCQSLPFGGVKDSGFGRFAG 375
+ + +E ++ IND ++ + PFGG + SG G
Sbjct: 484 AQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPG 533
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486 | Back alignment and structure |
|---|
Score = 153 bits (390), Expect = 8e-42
Identities = 87/361 (24%), Positives = 154/361 (42%), Gaps = 37/361 (10%)
Query: 49 PLGVVGAIVSWNYPFHNI---FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 105
P+GVVG I +N+P + PM A+ GN ++K SE + + A
Sbjct: 141 PIGVVGGIAPFNFPMM-VPCWMFPM--AIALGNTFILKPSERTPLLTEKLVELFEKA--- 194
Query: 106 VGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK 163
G P+ + +V+ G + ++ + I FVGS VG + + S+ L V G K
Sbjct: 195 -GLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENLKRVQSLTGAK 253
Query: 164 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 223
+ IV +D ++ V AA S+G+ C V I F++++ + V + G
Sbjct: 254 NHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIADEFMAKLQEKVADIKIG 313
Query: 224 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFP-PTVIV 282
L +G + ++ ++ + + L++GA ++ G + D YF PT+
Sbjct: 314 NGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGR----ENVSDDGYFVGPTIFD 369
Query: 283 NVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ 342
NV M + ++E F P++ +++ +E +++AN S + G +F+ + + R I
Sbjct: 370 NVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRENID 429
Query: 343 CGVAAIN--------DFASNYMCQSLPFGGVKDSGFG--RFAGVEGLRACCLVKSVVEDR 392
G+ IN F PF G K S FG G + + K V R
Sbjct: 430 AGMLGINLGVPAPMAFF---------PFSGWKSSFFGTLHANGKDSVDFYTRKKVVTA-R 479
Query: 393 W 393
+
Sbjct: 480 Y 480
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521 | Back alignment and structure |
|---|
Score = 152 bits (386), Expect = 4e-41
Identities = 82/367 (22%), Positives = 159/367 (43%), Gaps = 45/367 (12%)
Query: 49 PLGVVGAIVSWNYP-------FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 101
P+G+ I +N+P F A+ GN ++K SE ++
Sbjct: 162 PVGIGAGITPFNFPGMIPMWMF-----AP--AIACGNAFILKPSERDPSVPIRLAELMIE 214
Query: 102 ALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLE 159
A G P +++V+ G +A+++ + + FVGS + R + A+
Sbjct: 215 A----GLPAGILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAMNGKRAQCF 270
Query: 160 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNC-AGAERFYVHRDIYALFVSQVAKIVK 218
G K+ I+ D D+ A + A S+G+ C A + V + + ++ +V+
Sbjct: 271 GGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVE 330
Query: 219 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFP- 277
S+ GP K DMG + E +++++L++ +++GA+++ G +G + +F
Sbjct: 331 SLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGR-DFKLQGYENGHFIG 389
Query: 278 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREI 337
+ +V M + + E FGP++ +++ EE + L YG G A+++ AR+
Sbjct: 390 GCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAARDF 449
Query: 338 AAQIQCGVAAINDFASNYMCQSLP---------FGGVKDSGFG--RFAGVEGLRACCLVK 386
A++I G+ +N +P FGG K S FG G + ++ K
Sbjct: 450 ASRINIGMVGVN----------VPIPVPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTK 499
Query: 387 SVVEDRW 393
++ RW
Sbjct: 500 TITS-RW 505
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 456 | |||
| 2wme_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 100.0 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 100.0 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 100.0 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 100.0 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 100.0 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 100.0 | |
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 100.0 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 100.0 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 100.0 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 100.0 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 100.0 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 100.0 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 100.0 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 100.0 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 100.0 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 100.0 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 100.0 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 100.0 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 100.0 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 100.0 | |
| 4h7n_A | 474 | Aldehyde dehydrogenase; structural genomics, PSI-b | 100.0 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 100.0 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 100.0 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 100.0 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 100.0 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 100.0 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 100.0 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 100.0 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 100.0 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 100.0 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 100.0 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 100.0 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 100.0 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 100.0 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 100.0 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 100.0 | |
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 100.0 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 100.0 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 100.0 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 100.0 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 100.0 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 100.0 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 100.0 | |
| 1vlu_A | 468 | Gamma-glutamyl phosphate reductase; YOR323C, struc | 100.0 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 100.0 | |
| 2h5g_A | 463 | Delta 1-pyrroline-5-carboxylate synthetase; dehydr | 100.0 | |
| 4ghk_A | 444 | Gamma-glutamyl phosphate reductase; structural gen | 100.0 | |
| 1o20_A | 427 | Gamma-glutamyl phosphate reductase; TM0293, struct | 100.0 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 100.0 | |
| 1kae_A | 434 | HDH, histidinol dehydrogenase; L-histidinol dehydr | 97.1 | |
| 4gic_A | 423 | HDH, histidinol dehydrogenase; protein structure i | 96.88 |
| >2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-92 Score=741.54 Aligned_cols=376 Identities=29% Similarity=0.474 Sum_probs=347.8
Q ss_pred HHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecCC
Q 012790 7 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 86 (456)
Q Consensus 7 ~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~ 86 (456)
.|+..+++.++|+++.++++... ..+. ..+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+
T Consensus 104 ~~v~~~~~~~~~~a~~~~~~~~~-~~~~---~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~a~ALaaGNtVVlKPse 179 (490)
T 2wme_A 104 VDIVTGADVLEYYAGLVPAIEGE-QIPL---RETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSE 179 (490)
T ss_dssp THHHHHHHHHHHHHHHGGGCCEE-EEEE---ETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCT
T ss_pred HHHHHHHHHHHHHHhccccccCc-cccc---cCCcceeEEecceeEEEEeccccCcchhhhhhHHHHHHcCCeEEEECCc
Confidence 36889999999999988775432 2221 1245678999999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHH-HhhccCCcccccCCC
Q 012790 87 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMR-NASKTLTPVTLELGG 162 (456)
Q Consensus 87 ~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~-~aa~~~~pv~lElgG 162 (456)
.+|+++.++++++. ++|+|+|++|+|+|++ ++++.|++ +||+|+||||+.+|++|++ .+++++||++|||||
T Consensus 180 ~tp~ta~~l~~l~~----eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~a~~~lk~v~lELGG 255 (490)
T 2wme_A 180 VTPLTALKLAEIYT----EAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGG 255 (490)
T ss_dssp TSCHHHHHHHHHHH----HHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHHCCEEEEECCC
T ss_pred CCHHHHHHHHHHHH----HhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhhhccCCceEEEEcCC
Confidence 99999999988865 6899999999999976 78999998 8999999999999998876 557789999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHH
Q 012790 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 242 (456)
Q Consensus 163 k~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~ 242 (456)
|||+||++|||++.|++.+++++|.|+||.|+|++|+|||++++|+|+++|+++++++++|||.++++++||+++++|++
T Consensus 256 k~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~~~~~Gpli~~~~~~ 335 (490)
T 2wme_A 256 KSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHME 335 (490)
T ss_dssp CCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHH
T ss_pred cCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCccccCccCCcCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCc
Q 012790 243 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 322 (456)
Q Consensus 243 ~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL 322 (456)
++.++|++++++|+++++||..........|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||
T Consensus 336 rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~yGL 415 (490)
T 2wme_A 336 SVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGL 415 (490)
T ss_dssp HHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCS
T ss_pred HHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCCHHHHHHHHhcCCCCC
Confidence 99999999999999999999865443345799999999999999999999999999999999999999999999999999
Q ss_pred eeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEcc
Q 012790 323 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 323 ~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~ 392 (456)
++||||+|.++++++++++++|+|+||++... .+.+||||+|+||+|++||++||++||+.|+|+++.
T Consensus 416 ~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~--~~~~PFGG~k~SG~Gre~G~~gl~~ft~~K~v~i~~ 483 (490)
T 2wme_A 416 AAGVVTQDLARAHRAIHRLEAGICWINTWGES--PAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVEL 483 (490)
T ss_dssp EEEEECSBHHHHHHHHHHSCCSEEEESCCSCC--CTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred eEEEEcCCHHHHHHHHHHCCeeEEEEeCCCCC--CCCCCcccccccccCchhHHHHHHHhhceeEEEEEC
Confidence 99999999999999999999999999986543 356999999999999999999999999999999875
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-91 Score=731.33 Aligned_cols=387 Identities=28% Similarity=0.477 Sum_probs=354.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecC
Q 012790 6 LGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 85 (456)
Q Consensus 6 ~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps 85 (456)
..|+..+++.++|+++++++|++++.........+...+++++|+|||++|+|||||+.++++++++||++||+||+|||
T Consensus 77 ~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps 156 (469)
T 3sza_A 77 YEEVVYVLEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPS 156 (469)
T ss_dssp HTTHHHHHHHHHHHHHHHHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECC
Confidence 35888899999999999999987665433322234568899999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh-ccCEEEecCCHHHHHHHHHHhhccCCcccccCCCcc
Q 012790 86 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD 164 (456)
Q Consensus 86 ~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~-~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgGk~ 164 (456)
+.+|+++.++++++.+ + +|+|++|+|+|+++.+..|+. ++|+|+||||+++|+.|+++|++++||+++||||||
T Consensus 157 ~~tp~t~~~l~~l~~~----a-lP~gvv~vv~g~~~~~~~ll~~~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~ 231 (469)
T 3sza_A 157 ELSENMASLLATIIPQ----Y-LDKDLYPVINGGVPETTELLKERFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKS 231 (469)
T ss_dssp TTSHHHHHHHHHHHHH----H-SCTTTSCBCCCSHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCC
T ss_pred CCChHHHHHHHHHHHH----h-CCcceEEEEECCHHHHHHHHhcCCCEEEEECCHHHHHHHHHHHhhccCceEEecCCCC
Confidence 9999999999998764 4 999999999998777778888 999999999999999999999999999999999999
Q ss_pred eEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHHHH
Q 012790 165 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKL 244 (456)
Q Consensus 165 p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v 244 (456)
|+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++ +|+|.++++++||+++++|++++
T Consensus 232 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv 310 (469)
T 3sza_A 232 PCYVDKNCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRV 310 (469)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHH
T ss_pred ceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998 59999999999999999999999
Q ss_pred HHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCcee
Q 012790 245 QNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGC 324 (456)
Q Consensus 245 ~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~ 324 (456)
.++| +|+++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++
T Consensus 311 ~~~i-----~ga~v~~GG~~-----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa 380 (469)
T 3sza_A 311 MGLI-----EGQKVAYGGTG-----DAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLAL 380 (469)
T ss_dssp HHHH-----TTSEEEECCCE-----ETTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEE
T ss_pred HHHH-----cCCEEEeCCcc-----CCCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceE
Confidence 9998 58999999973 3468999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEcccccccccCCCCC
Q 012790 325 AVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKP 404 (456)
Q Consensus 325 ~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~~~~~~~~~~~~~ 404 (456)
||||+|.++++++++++++|+|+||++..+...+.+||||+|+||+|+++|.+||++||+.|+|+.++++. ....+
T Consensus 381 ~v~t~d~~~a~~~~~~l~~G~V~vN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~g~~~ft~~K~v~~~~~~~----~~~~~ 456 (469)
T 3sza_A 381 YMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVRPLMN----DEGLK 456 (469)
T ss_dssp EEECSCHHHHHHHHHHCCCSEEEESCSSGGGSCTTSCBCCCGGGEECCBSTHHHHHHTEEEEEEEECCSSC----CGGGG
T ss_pred EEECCCHHHHHHHHHhCCcceEEEeCCCCCCCCCCCCcCCccccccCccchHHHHHHhhCeeEEEECCccc----ccccc
Confidence 99999999999999999999999999876555667999999999999999999999999999999988642 11245
Q ss_pred CCCCCCcc
Q 012790 405 IQYPVAEN 412 (456)
Q Consensus 405 ~~~p~~~~ 412 (456)
++|||+..
T Consensus 457 ~~yppy~~ 464 (469)
T 3sza_A 457 VRYPPSPA 464 (469)
T ss_dssp GGSSSCCC
T ss_pred cccCCCCc
Confidence 77887543
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-90 Score=724.25 Aligned_cols=374 Identities=28% Similarity=0.452 Sum_probs=351.3
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++++++|+++..... .+...+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 83 a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~----~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKp 158 (484)
T 3ros_A 83 SKEEVELCVSICNYYADHGPEMLKPTKLNS----DLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKH 158 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSCEEECC----TTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCeeccC----CCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEEC
Confidence 457999999999999999999987754332 2457899999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg 161 (456)
|+.+|+++.++++++. ++|+|+|++|+|+|++ +.++ |++ ++|+|+||||+++|+.|+++|++++||+++|||
T Consensus 159 s~~tp~t~~~l~~l~~----~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~~lk~v~lELG 233 (484)
T 3ros_A 159 AHNVPGSAALTAKIIK----RAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELG 233 (484)
T ss_dssp CTTCHHHHHHHHHHHH----HHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCCChHHHHHHHHHHH----HhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhccCCceEeecC
Confidence 9999999998888765 6899999999999987 4566 887 899999999999999999999999999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++++|+|.++++++||+++++++
T Consensus 234 Gk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~ 313 (484)
T 3ros_A 234 GNDAFIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAK 313 (484)
T ss_dssp CCCEEEECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHH
T ss_pred CCCcceeCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCC
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 321 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~g 321 (456)
++++++|++++++|+++++||... +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 314 ~rv~~~i~~a~~~Ga~v~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~G 389 (484)
T 3ros_A 314 EKLEAQVKEAIDAGAKVFYQYPEI----DSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYG 389 (484)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCCC----CCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCC
T ss_pred HHHHHHHHHHHHcCCeEEecCCcC----CCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCC
Confidence 999999999999999999999742 3579999999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEccc
Q 012790 322 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRW 393 (456)
Q Consensus 322 L~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~~ 393 (456)
|++||||+|.++++++++++++|+|+||++... .+.+||||+|+||+|+++|++||++||+.|+|+.+..
T Consensus 390 L~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~--~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~ 459 (484)
T 3ros_A 390 LGSSVIGSDIDRAKKVSAQIETGMTVINGRWIT--SGELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDVTK 459 (484)
T ss_dssp SCEEEECSCHHHHHHHHHHSCSSCCEETSCCCC--CTTSCBCCSGGGEESCBSHHHHHTTTCEEEEEEECGG
T ss_pred cEEEEECCCHHHHHHHHHhCccceEEECCCCCC--CCCCCcCCcCcccCCcCchHHHHHHhheeEEEEECCC
Confidence 999999999999999999999999999996432 4569999999999999999999999999999998764
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-90 Score=727.15 Aligned_cols=380 Identities=32% Similarity=0.509 Sum_probs=351.5
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++.++++.++...+......+...+++++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 107 a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKp 186 (503)
T 3iwj_A 107 AAWDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKP 186 (503)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCchHHHHHHHHHHHHHhcCCeEEEEC
Confidence 45699999999999999999887544222111112456799999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg 161 (456)
|+.+|+++.++++++. ++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+++|+.|+++|++++||++||||
T Consensus 187 s~~tp~t~~~l~~l~~----~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~l~~v~lElG 262 (503)
T 3iwj_A 187 SELASLTCLELGEICK----EVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIMTAAAQLVKPVSLELG 262 (503)
T ss_dssp CTTSCHHHHHHHHHHH----HHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHHHHHHHHHGGGTCCEEEECC
T ss_pred CCcchHHHHHHHHHHH----HhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHHHHHHHHHhcCCCCEEEECC
Confidence 9999999999888764 6899999999999976 77889987 899999999999999999999999999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++++|+|.++++++||+++++|+
T Consensus 263 Gk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~ 342 (503)
T 3iwj_A 263 GKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQY 342 (503)
T ss_dssp CCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHH
T ss_pred CCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCccCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCC
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 321 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~g 321 (456)
+++.++|++++++|+++++||.... ....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 343 ~~v~~~i~~a~~~Ga~v~~gG~~~~--~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~g 420 (503)
T 3iwj_A 343 EKILKFVSNAKSEGATILTGGSRPE--HLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYG 420 (503)
T ss_dssp HHHHHHHHHHHHTTCEEEECCSCCT--TCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCC
T ss_pred HHHHHHHHHHHHCCCEEEecCCCCc--cCCCCceeCCeeeecCCCCchhhCceeeCceEEEEEeCCHHHHHHHHhCCCCC
Confidence 9999999999999999999997421 11479999999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEcc
Q 012790 322 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 322 L~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~ 392 (456)
|++||||+|.++++++++++++|+|+||++... .+.+||||+|+||+|++||.+||++||+.|+|+.+.
T Consensus 421 L~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~--~~~~PfGG~k~SG~G~~~G~~g~~~f~~~k~v~~~~ 489 (503)
T 3iwj_A 421 LGAAVISNDLERCERVTKAFKAGIVWVNCSQPC--FTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTQYI 489 (503)
T ss_dssp SEEEEECSCHHHHHHHHHHCCSSEEEESSSCCC--CTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEEC
T ss_pred cEEEEECCCHHHHHHHHHhCCcceEEEcCCCCC--CCCCCcCCcCcccCCCcchHHHHHHhhCeEEEEEeC
Confidence 999999999999999999999999999986432 456999999999999999999999999999998864
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-89 Score=721.68 Aligned_cols=372 Identities=28% Similarity=0.459 Sum_probs=350.6
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++++++|..+. .+.+ +...+++++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 91 a~~Ev~~~~~~~~~~a~~~~~~~~~~-~~~~----~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKp 165 (486)
T 3pqa_A 91 ARVEVERSIGTFKLAAFYVKEHRDEV-IPSD----DRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHP 165 (486)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCEEE-ECCT----TEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCce-ecCC----CceeEEEEccccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEEC
Confidence 45799999999999999999986543 2221 456789999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg 161 (456)
|+.+|+++.++++++.+++.++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+++|+.|++.|+ +||+++|||
T Consensus 166 s~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa--~~~v~lELG 243 (486)
T 3pqa_A 166 SSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG--FKKIALELG 243 (486)
T ss_dssp CTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC--SSEEEEECC
T ss_pred CCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC--CCceeeccC
Confidence 999999999999999999999999999999999976 56899987 8999999999999999999988 899999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++++|+|.++++++||+++++++
T Consensus 244 Gk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~ 323 (486)
T 3pqa_A 244 GVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHA 323 (486)
T ss_dssp CCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHH
T ss_pred CcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCCCCcCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCC
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 321 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~g 321 (456)
+++.++|++++++|+++++||. ..|+|++|||+ +++++|++++||+||||++|++|+| ||||+++|+++||
T Consensus 324 ~~v~~~i~~a~~~Ga~v~~gG~-------~~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~~aN~~~~g 394 (486)
T 3pqa_A 324 EWVEKVVEKAIDEGGKLLLGGK-------RDKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYG 394 (486)
T ss_dssp HHHHHHHHHHHHTTCEEEECCC-------EETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH-HHHHHHHTCSSCC
T ss_pred HHHHHHHHHHHHCCCEEEecCC-------CCCcEeccEEE-eCCCCChhhcccccccEEEEEEEcH-HHHHHHHhcCCCC
Confidence 9999999999999999999997 25899999999 9999999999999999999999999 9999999999999
Q ss_pred ceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEccc
Q 012790 322 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRW 393 (456)
Q Consensus 322 L~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~~ 393 (456)
|++||||+|.++++++++++++|+|+||++..+.. +.+||||+|+||+|++||++||++||+.|+|+.+..
T Consensus 395 L~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~-~~~PfGG~k~SG~Gr~~g~~gl~~f~~~k~v~~~~~ 465 (486)
T 3pqa_A 395 LHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQ-DNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIISKA 465 (486)
T ss_dssp SEEEEECSBHHHHHHHHHHSCSSEEEESSCTTCCC-TTSCBCCSGGGEESCBSHHHHHHHTEEEEEEEEEC-
T ss_pred cEEEEECCCHHHHHHHHHhCCcceEEEeCCCCcCC-CCCCCCCcCcCcCCCCCcHHHHHHhhceEEEEEcCC
Confidence 99999999999999999999999999999866433 369999999999999999999999999999988754
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-89 Score=723.13 Aligned_cols=379 Identities=31% Similarity=0.505 Sum_probs=351.2
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++.++++... ..+... .+...+++++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 129 a~~ev~~~~~~~~~~a~~~~~~~g~-~~~~~~--~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~apALaaGNtVVlKP 205 (520)
T 3ed6_A 129 SYADMDDIHNVFMYFAGLADKDGGE-MIDSPI--PDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKP 205 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCCEE-EECCSS--TTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCe-ecccCC--CCCcccccccCccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEEc
Confidence 4569999999999999999887543 222211 2456789999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg 161 (456)
|+.+|+++.++++++. ++|+|+|++|+|+|++ +.++.|++ ++|+|+||||+++|+.|++.|++++||++||||
T Consensus 206 s~~tp~t~~~l~~l~~----eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~~aa~~l~~v~lELG 281 (520)
T 3ed6_A 206 SEITPLTTIRVFELME----EVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAANNVTNIALELG 281 (520)
T ss_dssp CTTCCHHHHHHHHHHH----HHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHTTTCEEEEECC
T ss_pred CCcchHHHHHHHHHHH----HhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhcCCCEEEEcC
Confidence 9999999999888865 6899999999999964 78999997 899999999999999999999999999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||+++++++
T Consensus 282 Gk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d~~~~~Gpli~~~~~ 361 (520)
T 3ed6_A 282 GKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHR 361 (520)
T ss_dssp CCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTTSTTCSBCCCSCHHHH
T ss_pred CCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCcccccCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCC
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 321 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~g 321 (456)
++++++|++++++|+++++||..........|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 362 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~G 441 (520)
T 3ed6_A 362 NKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYG 441 (520)
T ss_dssp HHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCC
T ss_pred HHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCCHHHHHHHHhCCCCC
Confidence 99999999999999999999985321111468999999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEcc
Q 012790 322 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 322 L~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~ 392 (456)
|++||||+|.++++++++++++|+|+||++... .+.+||||+|+||+|+++|++||++||+.|+|+.+.
T Consensus 442 L~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~--~~~~PfGG~k~SG~Gre~G~~gl~~~t~~k~v~~~~ 510 (520)
T 3ed6_A 442 LAGAVFSKDIGKAQRVANKLKLGTVWINDFHPY--FAQAPWGGYKQSGIGRELGKEGLEEYLVSKHILTNT 510 (520)
T ss_dssp SEEEEECSCHHHHHHHHHHSCCSEEEESCSCCC--CTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEES
T ss_pred cEEEEECCCHHHHHHHHHHCCcceEEECCCCCC--CCCCCcCCcCcCcCCccchHHHHHHhhceEEEEEcC
Confidence 999999999999999999999999999998665 356999999999999999999999999999998764
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-89 Score=721.82 Aligned_cols=376 Identities=30% Similarity=0.496 Sum_probs=350.4
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEE-ecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEe
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEF-HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIK 83 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlK 83 (456)
+..|+..+++.++|+++++++|.... .+.. .+...++++ +|+|||++|+|||||+.++++++++||++||+||+|
T Consensus 106 a~~ev~~~~~~l~~~a~~~~~~~~~~-~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlK 181 (506)
T 3rh9_A 106 AQGEVDYAAGFFDYCAKHISALDSHT-IPEK---PKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIK 181 (506)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGGCCEE-CSCC---GGGCEEEEEEEECCSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcc-cccC---CCceeeEeecccceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEE
Confidence 45799999999999999999986542 2222 345678889 999999999999999999999999999999999999
Q ss_pred cCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccC
Q 012790 84 VSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 160 (456)
Q Consensus 84 ps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lEl 160 (456)
||+.+|+++.++++++. ++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+++|+.|+++|++++||+++||
T Consensus 182 ps~~tp~t~~~l~~l~~----eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~l~~v~lEl 257 (506)
T 3rh9_A 182 PASETPLTMIAFFSVMD----KLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTAEQVKKLALEL 257 (506)
T ss_dssp CCTTSCHHHHHHHHHHT----TTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTTTTTCEEEEEC
T ss_pred cCCccHHHHHHHHHHHH----HhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhhhcCCceEEec
Confidence 99999999999888865 6899999999999975 78899998 79999999999999999999999999999999
Q ss_pred CCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHH
Q 012790 161 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 240 (456)
Q Consensus 161 gGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~ 240 (456)
|||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++++|+|.++++++||++++++
T Consensus 258 GGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~ 337 (506)
T 3rh9_A 258 GGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMNDGIDIGPLINKQG 337 (506)
T ss_dssp CCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHH
T ss_pred CCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcccCCcccccCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCC
Q 012790 241 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRY 320 (456)
Q Consensus 241 ~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~ 320 (456)
++++.++|++++++|+++++||...+ ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|
T Consensus 338 ~~rv~~~i~~a~~~Ga~v~~gG~~~~---~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~ 414 (506)
T 3rh9_A 338 FDKVKRHLQDALDKGASLVAGKQPAE---LGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEF 414 (506)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCGGG---CCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHTCSSC
T ss_pred HHHHHHHHHHHHHCCCEEEecCCcCC---CCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHHHHHHHHhCCCC
Confidence 99999999999999999999997421 126899999999999999999999999999999999999999999999999
Q ss_pred CceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEccc
Q 012790 321 GLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRW 393 (456)
Q Consensus 321 gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~~ 393 (456)
||++||||+|.++++++++++++|+|+||++..+. +.+||||+|+||+|+++|++||++||+.|+|+.+..
T Consensus 415 gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~--~~~PfGG~k~SG~G~~~G~~gl~~ft~~K~v~~~~~ 485 (506)
T 3rh9_A 415 GLASYVFTADAERAQRVAAGLRFGHVGWNTGTGPT--PEAPFGGMKASGIGREGGLEGLFEFVEAQTVPRGFA 485 (506)
T ss_dssp CSEEEEECSCHHHHHHHHHHCCCSEEEESCCCCCC--TTSCBCCSGGGEESCBSHHHHHTTTEEEEEEEEC--
T ss_pred CceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCC--CCCCccCcCcCcCCcCccHHHHHHhcceEEEEEcCc
Confidence 99999999999999999999999999999986543 469999999999999999999999999999988753
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-89 Score=719.86 Aligned_cols=379 Identities=28% Similarity=0.450 Sum_probs=349.0
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++.+++|..+.. +.. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 107 a~~ev~~~~~~~~~~a~~~~~~~~~~~-~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKp 183 (497)
T 3k2w_A 107 AEMEVDVTATFIDYGCDNALTIEGDIL-PSD--NQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKP 183 (497)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTCCEEEE-ECS--STTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCccc-ccC--CCCcceeEEEcCCceEEEECCCccHHHHHHHHHHHHHHcCCEEEEEC
Confidence 347999999999999999999875432 211 12456789999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg 161 (456)
|+.+|+++.++++++. ++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+++|+.|++.+++++||+++|||
T Consensus 184 s~~tp~t~~~l~~ll~----~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~~aa~~l~pv~lElG 259 (497)
T 3k2w_A 184 TQETPLATTELGRIAK----EAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEYMTPVMLELG 259 (497)
T ss_dssp CSSSCHHHHHHHHHHH----HTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHHHHHTTTTCCEEEECC
T ss_pred CCCChHHHHHHHHHHH----HhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhhcCCCeEEEcC
Confidence 9999999999888864 7899999999999965 78999998 799999999999999999999999999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++++|+|.++++++||+++++++
T Consensus 260 Gk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~ 339 (497)
T 3k2w_A 260 GKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREI 339 (497)
T ss_dssp CCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHH
T ss_pred CCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCccccCcCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCC
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 321 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~g 321 (456)
+++.++|++++++|+++++||..........|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 340 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~g 419 (497)
T 3k2w_A 340 DNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYG 419 (497)
T ss_dssp HHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHTCSSEE
T ss_pred HHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeCCHHHHHHHHhcCCCC
Confidence 99999999999999999999973111111268999999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEcc
Q 012790 322 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 322 L~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~ 392 (456)
|++||||+|.++++++++++++|+|+||++..+. +.+||||+|+||+|+++|++||++||+.|+|+.+.
T Consensus 420 L~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~--~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~~~ 488 (497)
T 3k2w_A 420 LSAYVHTQSFANINQAISDLEVGEVYINRGMGEQ--HQGFHNGWKQSGFGGEDGKFGLEQYLEKKTVYINE 488 (497)
T ss_dssp SEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCC--TTSCBCCEETSEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred cEEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCCC--CCCCcCCcCCCcCCccchHHHHHHhcceEEEEEEc
Confidence 9999999999999999999999999999986653 56999999999999999999999999999998754
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-88 Score=714.75 Aligned_cols=374 Identities=30% Similarity=0.492 Sum_probs=348.5
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEe
Q 012790 4 ASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIK 83 (456)
Q Consensus 4 ~~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlK 83 (456)
+...|+..+++.++|+++.+++|.++. .+.. .+...+++++|+|||++|+|||||+.++++++++||++||+||+|
T Consensus 118 ~~~~ev~~~~~~~~~~a~~~~~~~g~~-~~~~---~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlK 193 (501)
T 1bxs_A 118 AYLMDLGGCIKTLRYCAGWADKIQGRT-IPMD---GNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVK 193 (501)
T ss_dssp HHHTHHHHHHHHHHHHHHHGGGCCEEE-ECCS---SSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCe-eecc---CCcceeEEecCCceEEEECCCcchHHHHHHHHHHHHHcCCeeecc
Confidence 334699999999999999999987642 2221 234568999999999999999999999999999999999999999
Q ss_pred cCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhh-ccCCccccc
Q 012790 84 VSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNAS-KTLTPVTLE 159 (456)
Q Consensus 84 ps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa-~~~~pv~lE 159 (456)
||+.+|+++.++++++. ++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+++|+.|+++|+ +++||+++|
T Consensus 194 ps~~tp~t~~~l~~l~~----~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~~l~~v~lE 269 (501)
T 1bxs_A 194 PAEQTPLTALHMGSLIK----EAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLE 269 (501)
T ss_dssp CCTTCCHHHHHHHHHHH----HHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCccHHHHHHHHHHHH----HhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhccCCcEEEe
Confidence 99999999999888764 6899999999999954 78999998 7999999999999999999999 999999999
Q ss_pred CCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHH
Q 012790 160 LGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLE 239 (456)
Q Consensus 160 lgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~ 239 (456)
||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||+++++
T Consensus 270 LGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~ 349 (501)
T 1bxs_A 270 LGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKE 349 (501)
T ss_dssp CCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTTCCBCCCSCHH
T ss_pred cCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCC
Q 012790 240 HSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSR 319 (456)
Q Consensus 240 ~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~ 319 (456)
+++|++++|++++++|+++++||... +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++
T Consensus 350 ~~~rv~~~i~~a~~~Ga~~~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~ 425 (501)
T 1bxs_A 350 QYEKILDLIESGKKEGAKLECGGGPW----GNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTF 425 (501)
T ss_dssp HHHHHHHHHHHHHHTTCEECSCCSEE----CSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSS
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCccC----CCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhcCC
Confidence 99999999999999999999999731 23689999999999999999999999999999999999999999999999
Q ss_pred CCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEc
Q 012790 320 YGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 320 ~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~ 391 (456)
|||++||||+|.++++++++++++|+|+||++... .+.+||||+|.||+|+++|++||++|++.|+|+.+
T Consensus 426 ~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~--~~~~pfGG~k~SG~G~~~G~~~l~~f~~~K~v~~~ 495 (501)
T 1bxs_A 426 YGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVV--SAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIK 495 (501)
T ss_dssp CCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCC--CTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred CCeeEEEEcCCHHHHHHHHHhcCeeEEEECCCCCC--CCCCCCCCcCcCCcCccchHHHHHHhhCeeEEEEc
Confidence 99999999999999999999999999999987543 35699999999999999999999999999999875
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-88 Score=714.45 Aligned_cols=373 Identities=31% Similarity=0.544 Sum_probs=346.4
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|++..++++... ..+.. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 107 a~~ev~~~~~~l~~~a~~~~~~~g~-~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKp 183 (484)
T 3ifg_A 107 AKGEIAYAASFIEWFAEEGKRVAGD-TLPTP--DANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKP 183 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCEE-EECCS--STTEEEEEEEEECSSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCc-ccccc--CCCceeEEEecCCcEEEEECCCcChHHHHHHHHHHHHHcCCEEEEEC
Confidence 4579999999999999988765322 11211 12456789999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg 161 (456)
|+.+|+++.++++++. ++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+++|+.|++++++++||+++|||
T Consensus 184 s~~tp~t~~~l~~l~~----~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa~~~k~v~lElG 259 (484)
T 3ifg_A 184 AESTPFSALAMAFLAE----RAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPTVKKLTLELG 259 (484)
T ss_dssp CTTSCHHHHHHHHHHH----HHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTGGGTCEEEEECC
T ss_pred CCCCcHHHHHHHHHHH----HhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhccCCceEEecC
Confidence 9999999998888764 6899999999999975 78999998 899999999999999999999999999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||+++++++
T Consensus 260 Gk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~ 339 (484)
T 3ifg_A 260 GNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAV 339 (484)
T ss_dssp CCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHH
T ss_pred CCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCC
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 321 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~g 321 (456)
++++++|++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 340 ~~v~~~i~~a~~~Ga~v~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~G 415 (484)
T 3ifg_A 340 KKVESHIADALAKGASLMTGGKRH----ALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFG 415 (484)
T ss_dssp HHHHHHHHHHHHTTCEEEECCSBC----TTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSEE
T ss_pred HHHHHHHHHHHHCCCEEEECCCcc----CCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHHHHHHhCCCCC
Confidence 999999999999999999999742 2368999999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEE
Q 012790 322 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 390 (456)
Q Consensus 322 L~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~ 390 (456)
|++||||+|.++++++++++++|+|+||+... ..+.+||||+|+||+|+++|++||++||+.|+|+.
T Consensus 416 L~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~--~~~~~PfGG~k~SG~Gr~~g~~gl~~~~~~k~v~~ 482 (484)
T 3ifg_A 416 LAAYLYSRDIGRVWRVAEALEYGMVGINTGLI--SNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCV 482 (484)
T ss_dssp SEEEEECCBHHHHHHHHHHCCCSEEEESCSCC--CCSSSCBCCEETTEECCBSTTTTTGGGEEEEEEEE
T ss_pred ceEEEECCCHHHHHHHHHhCCcceEEEcCCCC--CCCCCCcCCcCcCcCCCCchHHHHHHhhceEEEEE
Confidence 99999999999999999999999999998643 24569999999999999999999999999999975
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-88 Score=716.38 Aligned_cols=373 Identities=32% Similarity=0.491 Sum_probs=348.1
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
...|+..+++.++|+++++++|.++. .+.. .+...+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 118 ~~~ev~~~~~~~~~~a~~~~~~~g~~-~~~~---~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKp 193 (500)
T 1o04_A 118 YLVDLDMVLKCLRYYAGWADKYHGKT-IPID---GDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKV 193 (500)
T ss_dssp HHTHHHHHHHHHHHHHHHTTTCCEEE-ECCS---SSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCcc-eecC---CCceEEEEEecCCcEEEECCCCchHHHHHHHHHHHHHcCCEEEEEC
Confidence 34699999999999999999987642 2221 2345689999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhh-ccCCcccccC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNAS-KTLTPVTLEL 160 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa-~~~~pv~lEl 160 (456)
|+.+|+++.++++++. ++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+++|+.|+++|+ +++||+++||
T Consensus 194 s~~tp~t~~~l~~l~~----~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~~l~pv~lEL 269 (500)
T 1o04_A 194 AEQTPLTALYVANLIK----EAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLEL 269 (500)
T ss_dssp CTTSCHHHHHHHHHHH----HHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CccChHHHHHHHHHHH----HhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhhcCceEEEEc
Confidence 9999999999888764 6899999999999954 78999998 7999999999999999999999 9999999999
Q ss_pred CCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHH
Q 012790 161 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 240 (456)
Q Consensus 161 gGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~ 240 (456)
|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++++
T Consensus 270 GGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~ 349 (500)
T 1o04_A 270 GGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQ 349 (500)
T ss_dssp CCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHH
T ss_pred CCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCcccccCccCcccCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCC
Q 012790 241 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRY 320 (456)
Q Consensus 241 ~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~ 320 (456)
+++++++|++++++|+++++||... +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|
T Consensus 350 ~~rv~~~i~~a~~~Ga~~~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~ 425 (500)
T 1o04_A 350 FKKILGYINTGKQEGAKLLCGGGIA----ADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTY 425 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCSBC----CSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCccC----CCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCHHHHHHHHhcCCC
Confidence 9999999999999999999999741 236899999999999999999999999999999999999999999999999
Q ss_pred CceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEc
Q 012790 321 GLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 321 gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~ 391 (456)
||++||||+|.++++++++++++|+|+||++... .+.+||||+|.||+|++||.+||++|++.|+|+.+
T Consensus 426 gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~--~~~~PfGG~k~SG~G~~~G~~gl~~f~~~K~v~~~ 494 (500)
T 1o04_A 426 GLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVF--GAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVK 494 (500)
T ss_dssp CSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCC--CTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEEE
T ss_pred CceEEEECCCHHHHHHHHHhCCeeEEEECCCCCC--CCCCCCCCcCCCCCCccchHHHHHHhcceEEEEEe
Confidence 9999999999999999999999999999987542 35699999999999999999999999999999875
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-88 Score=720.47 Aligned_cols=376 Identities=30% Similarity=0.464 Sum_probs=350.4
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++.+++|.. +..+... .+...+++++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 120 a~~ev~~~~~~l~~~a~~~~~~~~-~~~~~~~--~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKp 196 (528)
T 3u4j_A 120 ARGEIGFCADLWSYAAGQARALEG-QTHNNIG--DDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKP 196 (528)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCE-EEECCSC--TTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC-eeeccCC--CCceeEEEeccceEEEEECCCccHHHHHHHHHHHHHHcCCeEEEEc
Confidence 367999999999999999998863 2223221 2456789999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg 161 (456)
|+.+|+++.++++++. ++|+|+|++|+|+|++ +.+++|++ +||+|+||||+++|+.|+++|++++||++||||
T Consensus 197 s~~tp~t~~~l~~l~~----eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~lk~v~lELG 272 (528)
T 3u4j_A 197 SEFTSGTSIRLAELAR----EAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIAARTVKRVGLELG 272 (528)
T ss_dssp CTTCCHHHHHHHHHHH----HHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECC
T ss_pred CCccHHHHHHHHHHHH----HhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHHhcCCceEEecC
Confidence 9999999999988865 6899999999999954 78999998 899999999999999999999999999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++++|+|.++++++||+++++++
T Consensus 273 Gk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~ 352 (528)
T 3u4j_A 273 GKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNERTKIGAMISEAHA 352 (528)
T ss_dssp CCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECTTSTTCSBCCCSCHHHH
T ss_pred CCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCCCCcCCccCCccCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCC
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 321 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~g 321 (456)
+++.++|++++++|+++++||.... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 353 ~rv~~~i~~a~~~Ga~v~~gG~~~~---~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~G 429 (528)
T 3u4j_A 353 EKVHSYVTAGITSGAELLLGGERIG---REAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFG 429 (528)
T ss_dssp HHHHHHHHHHHHTTCEEEECCSEEC---TTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCC
T ss_pred HHHHHHHHHHHHCCCEEEeCCCcCC---CCCCcEecceEEecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhcCCCC
Confidence 9999999999999999999997421 1169999999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEcc
Q 012790 322 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 322 L~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~ 392 (456)
|++||||+|.++++++++++++|+|+||++... .+.+||||+|+||+|++||++||++||+.|+|+.+.
T Consensus 430 L~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~--~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~ 498 (528)
T 3u4j_A 430 LSASVWSTNLETALQTIRRIRAGRCWINSVIDG--TPELPIGGYKKSGLGRELGRYGFDEYSQFKGVHVTL 498 (528)
T ss_dssp SEEEEECSBHHHHHHHHHHSCCSEEEESCCSCC--CTTSCBCCSGGGEESCBSTTHHHHHTEEEEEEEEES
T ss_pred cEEEEEcCCHHHHHHHHHhCCeeEEEECCCCCC--CCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEeC
Confidence 999999999999999999999999999997543 456999999999999999999999999999998864
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-88 Score=715.88 Aligned_cols=379 Identities=24% Similarity=0.370 Sum_probs=351.1
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|++++++++... ..+.. ..+...+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 116 a~~ev~~~~~~~~~~a~~~~~~~g~-~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKp 192 (500)
T 2j6l_A 116 GVGEVQEYVDICDYAVGLSRMIGGP-ILPSE--RSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKG 192 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCCCB-EECCS--STTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCc-ccccc--CCCceeEEEEecccEEEEECCCcchhhHHHHHHHHHHHhCCEEEEEC
Confidence 3679999999999999988776432 11111 01234578899999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgG 162 (456)
|+.+|+++.++++++.++|.++|+|+|++|+|+|+.+.++.|++ ++|+|+||||+++|+.|+++|+++++|++|||||
T Consensus 193 s~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~g~~i~~~aa~~l~~v~lELGG 272 (500)
T 2j6l_A 193 APTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQERFGRSLLELGG 272 (500)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECCSHHHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred CCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHhccCCCceEEEcCC
Confidence 99999999999999999999999999999999996678999997 8999999999999999999999999999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHH
Q 012790 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 242 (456)
Q Consensus 163 k~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~ 242 (456)
|||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++++|+|.++++++||++++++++
T Consensus 273 k~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~ 352 (500)
T 2j6l_A 273 NNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVS 352 (500)
T ss_dssp CEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHH
T ss_pred CCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCCcccCCCccccCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCc
Q 012790 243 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 322 (456)
Q Consensus 243 ~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL 322 (456)
+++++|++++++|+++++||... +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||
T Consensus 353 rv~~~i~~a~~~Ga~v~~gg~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL 428 (500)
T 2j6l_A 353 MFLGAVEEAKKEGGTVVYGGKVM----DRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGL 428 (500)
T ss_dssp HHHHHHHHHHHTTCEEEECCSBC----SSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECCHHHHHHHHHTSSCCS
T ss_pred HHHHHHHHHHHCCCEEEECCccc----CCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCCHHHHHHHHhCCCCCc
Confidence 99999999999999999999742 23689999999999999999999999999999999999999999999999999
Q ss_pred eeEEecCCHHHHHHHH--HhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEc
Q 012790 323 GCAVFSGSQHRAREIA--AQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 323 ~~~vft~d~~~~~~~~--~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~ 391 (456)
++||||+|.+++++++ .++++|+|+||+.... ..+.+||||+|+||+|++||.+|+++|++.|+|+.+
T Consensus 429 ~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~~-~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~ 498 (500)
T 2j6l_A 429 SSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSG-AEIGGAFGGEKHTGGGRESGSDAWKQYMRRSTCTIN 498 (500)
T ss_dssp EEEEECCCHHHHHHHHSTTSCCSSEEEESSCTTC-CCTTSEECCSGGGCSCCEESTTGGGGGEEEEEEEEE
T ss_pred EEEEECCCHHHHHHHHhhccCCeeEEEECCCCcc-CCCCCCcCCcCCCCCCCcchHHHHHHhhceEEEEEe
Confidence 9999999999999999 7799999999986543 234689999999999999999999999999999764
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-89 Score=720.84 Aligned_cols=375 Identities=30% Similarity=0.450 Sum_probs=347.9
Q ss_pred HHHHHHHHHHHHHHhhhh---hhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 8 EIMTTCEKITWLLSEGEK---WLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 8 Ei~~~~~~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
|+..+++.++|+++.+++ |+..+..+.. .+. .+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 110 ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~~---~~~-~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKp 185 (517)
T 3r31_A 110 IVADPTSGADAFEFFGGIAPSALNGDYIPLG---GDF-AYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKP 185 (517)
T ss_dssp HHHSHHHHHHHHHHHHHHHHHHTCCCEEECS---SSE-EEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHhhhccccccCcccccC---CCc-ceEEEcCccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEc
Confidence 888999999999998876 5554433321 234 889999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgG 162 (456)
|+.+|+++.++++++. ++|+|+|++|+|+|+.+.+++|++ +||+|+||||+++|+.|+++|++++||+++||||
T Consensus 186 s~~tp~t~~~l~~ll~----eaGlP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~lk~v~lElGG 261 (517)
T 3r31_A 186 SENTPLGALKIAEILI----EAGLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAAAGHLKHVTMELGG 261 (517)
T ss_dssp CTTSCSHHHHHHHHHH----HTTCCTTSEEECCCCTTHHHHHHTCTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred CcccHHHHHHHHHHHH----HhCcCcccEEEEECCHHHHHHHHhCCCcCEEeccCCHHHHHHHHHHhhcCCCcEEEEcCC
Confidence 9999999999888865 689999999999996688999998 7999999999999999999999999999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHH
Q 012790 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 242 (456)
Q Consensus 163 k~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~ 242 (456)
|||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++++|+|.++++++||++++++++
T Consensus 262 k~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~ 341 (517)
T 3r31_A 262 KSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQE 341 (517)
T ss_dssp CEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCBSCHHHHH
T ss_pred cCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCCCCCCcCCcccCCcCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCc
Q 012790 243 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 322 (456)
Q Consensus 243 ~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL 322 (456)
++.++|++++++|+++++|| .........|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||
T Consensus 342 rv~~~i~~a~~~Ga~v~~gG-~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL 420 (517)
T 3r31_A 342 KVLSYIEKGKAEGATLITGG-GIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGL 420 (517)
T ss_dssp HHHHHHHHHHHHTCEEEECC-SCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEEECCHHHHHHHHHCSSEES
T ss_pred HHHHHHHHHHhCCCEEEECC-ccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhCCCCCe
Confidence 99999999999999999999 31111124699999999999999999999999999999999999999999999999999
Q ss_pred eeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEccc
Q 012790 323 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRW 393 (456)
Q Consensus 323 ~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~~ 393 (456)
++||||+|.++++++++++++|+|+||++... .+.+||||+|+||+|+++|++||++||+.|+|+.+..
T Consensus 421 aa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~--~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~ 489 (517)
T 3r31_A 421 AGGVFTADLARAHRVVDGLEAGTLWINTYNLC--PVEIPFGGSKQSGFGRENSAAALEHYSELKTVYVSTG 489 (517)
T ss_dssp EEEEECSCHHHHHHHHHHSCCSEEEESSCCCC--CTTSCBCCEETTEECCBSTGGGGGGSEEEEEEEECCC
T ss_pred eEEEEeCCHHHHHHHHHHCCcceEEECCCCCC--CCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEcCC
Confidence 99999999999999999999999999997543 4569999999999999999999999999999988653
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-88 Score=718.95 Aligned_cols=379 Identities=21% Similarity=0.355 Sum_probs=348.1
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++..+ ++..+..+. ...+...+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 121 a~~Ev~~~~~~l~~~a~~~~-~~~~~~~~~--~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKp 197 (521)
T 4e4g_A 121 AKGDIVRGLEVCEFVIGIPH-LQKSEFTEG--AGPGIDMYSIRQPVGIGAGITPFNFPGMIPMWMFAPAIACGNAFILKP 197 (521)
T ss_dssp HHHHHHHHHHHHHHHHTHHH-HTCEEEEEE--EETTEEEEEEEEECCEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHH-HhcCccccc--CCCCcceeEEEcCCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEC
Confidence 45799999999999987654 444332211 112345789999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgG 162 (456)
|+.+|+++.++++++. ++|+|+|++|+|+|+.+.+++|++ +||+|+||||+++|+.|+++|++++||+++||||
T Consensus 198 se~tp~t~~~l~~l~~----eaGlP~gvv~vv~g~~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGG 273 (521)
T 4e4g_A 198 SERDPSVPIRLAELMI----EAGLPAGILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAMNGKRAQCFGGA 273 (521)
T ss_dssp CTTSTHHHHHHHHHHH----HTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred CCcchHHHHHHHHHHH----HhCCCcCeEEEEeCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcCCCeeecCCC
Confidence 9999999999888865 689999999999998888889987 7999999999999999999999999999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehh-hHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD-IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 163 k~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
|||+||++|||++.|++.+++++|.|+||.|+|++|||||++ ++|+|+++|+++++++++|+|.++++++||+++++++
T Consensus 274 k~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~ 353 (521)
T 4e4g_A 274 KNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAE 353 (521)
T ss_dssp CEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCCTTCTTCSBCCCSCHHHH
T ss_pred CCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCCCCCccCccCCCCCHHHH
Confidence 999999999999999999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCC
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 321 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~g 321 (456)
+++.++|++++++|+++++||.....+.+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 354 ~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~g 433 (521)
T 4e4g_A 354 QRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYG 433 (521)
T ss_dssp HHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCBSSHHHHHHHHHHSSEE
T ss_pred HHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEeCCHHHHHHHHhcCCCC
Confidence 99999999999999999999974322223579999999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCC--CcchHHHHhccceeeEEEEc
Q 012790 322 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG--RFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 322 L~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G--~~~g~~gl~~ft~~k~v~~~ 391 (456)
|++||||+|.++++++++++++|+|+||++.. ...+.+||||+|+||+| ++||++||++||+.|+|+.+
T Consensus 434 Laa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~-~~~~~~PfGG~k~SG~G~~~~~G~~gl~~ft~~K~v~~~ 504 (521)
T 4e4g_A 434 NGVAIYTRDGDAARDFASRINIGMVGVNVPIP-VPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTITSR 504 (521)
T ss_dssp SEEEEECSBHHHHHHHHHHCCCSEEEESCSSC-CCCTTSCBCCEETTEESSCCBSHHHHHHHTEEEEEEEEC
T ss_pred eEEEEECCCHHHHHHHHHhCCeeeEEECCCCC-CCCCCCCcCCcccCCCCCCccchHHHHHHhheEEEEEEe
Confidence 99999999999999999999999999999753 33356999999999999 79999999999999999875
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-88 Score=715.23 Aligned_cols=378 Identities=31% Similarity=0.494 Sum_probs=349.2
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++++++|.. +..+.. .+...+++++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 115 a~~ev~~~~~~~~~~a~~~~~~~g-~~~~~~---~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKp 190 (503)
T 1a4s_A 115 AEYDIDAAWQCIEYYAGLAPTLSG-QHIQLP---GGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKP 190 (503)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGCCE-EEEECG---GGCEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC-CcccCC---CCceeEEEEecCceEEEECCCcchHHHHHHHHHHHHHcCCEEEEEC
Confidence 457999999999999999998865 222222 2346789999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgG 162 (456)
|+.+|+++.++++++. ++|+|+|++|+|+|+++.+++|++ ++|+|+||||+.+|+.|+++|++++||+++||||
T Consensus 191 s~~tp~ta~~l~~l~~----~aGlP~gvv~vv~g~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~~~v~lELGG 266 (503)
T 1a4s_A 191 SPMTPVTGVILAEIFH----EAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGG 266 (503)
T ss_dssp CTTSCHHHHHHHHHHH----HTTCCTTSEEECCCSHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCC
T ss_pred CCCChHHHHHHHHHHH----HhCCCcCeEEEEecCchHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcCCceEEecCC
Confidence 9999999999988865 789999999999996577889987 7999999999999999999999999999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHH
Q 012790 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 242 (456)
Q Consensus 163 k~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~ 242 (456)
|||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++++++
T Consensus 267 k~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~ 346 (503)
T 1a4s_A 267 KSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLD 346 (503)
T ss_dssp CCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHH
T ss_pred cCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCeEeecCCCCCCCC--CCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCC
Q 012790 243 KLQNLVNDALDKGAEILARGSFGHLSE--GAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRY 320 (456)
Q Consensus 243 ~v~~~i~~a~~~Ga~v~~gG~~~~~~~--~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~ 320 (456)
+++++|++++++|+++++||....... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|
T Consensus 347 rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~ 426 (503)
T 1a4s_A 347 KVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTF 426 (503)
T ss_dssp HHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEecCCHHHHHHHHhcCCC
Confidence 999999999999999999997421000 035899999999999999999999999999999999999999999999999
Q ss_pred CceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEcc
Q 012790 321 GLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 321 gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~ 392 (456)
||++||||+|.++++++++++++|+|+||++... .+.+||||+|+||+|++||++||++||+.|+|+.+.
T Consensus 427 gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~--~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~~~ 496 (503)
T 1a4s_A 427 GLASGVFTRDISRAHRVAANLEAGTCYINTYSIS--PVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVEM 496 (503)
T ss_dssp CSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCC--CTTSCBCCSGGGEECCBSTTGGGGGSEEEEEEEECC
T ss_pred CceEEEECCCHHHHHHHHHHCceeEEEECCCCCC--CCCCCCCCcCCCCCCccchHHHHHHhcCceEEEEcc
Confidence 9999999999999999999999999999997553 356999999999999999999999999999998753
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-88 Score=715.73 Aligned_cols=371 Identities=31% Similarity=0.503 Sum_probs=345.0
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccc----cccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeE
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI----HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGI 80 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~V 80 (456)
+..|+..+++.++|+++++++|.... .+... .. +...+++++|+|||++|+|||||+.+.++++++||++||+|
T Consensus 106 a~~Ev~~~~~~~~~~a~~~~~~~g~~-~~~~~-~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~V 183 (505)
T 3prl_A 106 AIGEVSRTADIIRHTADEALRLNGET-LKGDQ-FKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTV 183 (505)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCEEE-EEGGG-STTTCSSEEEEEEEEECSEEEEEECSSSTTHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcc-ccccc-cccccCCceeEEEEcCCcEEEEECCCccHHHHHHHHHHHHHHcCCEE
Confidence 45699999999999999999876432 11110 01 34578999999999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCccc
Q 012790 81 VIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVT 157 (456)
Q Consensus 81 vlKps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~ 157 (456)
|+|||+.+|+++.++++++ .++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+++|+.|+++|+ +||++
T Consensus 184 VlKpse~tp~ta~~l~~ll----~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~~v~ 257 (505)
T 3prl_A 184 VFKPATQGSLSGIKMVEAL----ADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEKAK--MIPVV 257 (505)
T ss_dssp EEEECSTTHHHHHHHHHHH----HHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHCC--SSCEE
T ss_pred EEECCCCChHHHHHHHHHH----HHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHcc--CCcEE
Confidence 9999999999998888775 47999999999999965 78899987 8999999999999999999998 99999
Q ss_pred ccCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccC
Q 012790 158 LELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCL 237 (456)
Q Consensus 158 lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~ 237 (456)
+|||||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++++|+|. +++++||+++
T Consensus 258 lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~-~~~~~gpli~ 336 (505)
T 3prl_A 258 LELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGSPE-DDADITPVID 336 (505)
T ss_dssp EECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTT-TTCSBCCCSC
T ss_pred EECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccCCCC-CcCcCCcccC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhc
Q 012790 238 LEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAND 317 (456)
Q Consensus 238 ~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~ 317 (456)
+++++++.++|++++++|+++++||. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+
T Consensus 337 ~~~~~rv~~~i~~a~~~Ga~v~~gG~-------~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~ 409 (505)
T 3prl_A 337 EKSAAFIQGLIDDALENGATLLSGNK-------RQGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQ 409 (505)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEECCC-------EETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHCCCEEEecCC-------CCCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCCHHHHHHHHhC
Confidence 99999999999999999999999997 25899999999999999999999999999999999999999999999
Q ss_pred CCCCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEcc
Q 012790 318 SRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 318 ~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~ 392 (456)
++|||++||||+|.++++++++++++|+|+||++.... .+.+||||+|+||+|++||++||++||+.|+|+.+.
T Consensus 410 ~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~-~~~~PFGG~k~SG~Gr~~g~~~~~~f~~~k~v~~~~ 483 (505)
T 3prl_A 410 SDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERG-PDHFPFLGVKKSGLGVQGIKPSLLSMTRERVTVLNL 483 (505)
T ss_dssp SSEESEEEEECSCHHHHHHHHHTSCSSEEEESSCCCSC-STTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEEC
T ss_pred CCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCCCCCC-CCCCCcCCcCcCCCCcCccHHHHHHhhceEEEEEeC
Confidence 99999999999999999999999999999999986533 456999999999999999999999999999998864
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-88 Score=715.39 Aligned_cols=373 Identities=28% Similarity=0.502 Sum_probs=346.5
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|++..++++.... .+.. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 127 a~~ev~~~~~~~~~~a~~~~~~~g~~-~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKP 203 (504)
T 3ek1_A 127 ARGEVLYAASFIEWFAEEAKRVYGDT-IPAP--QNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRP 203 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCEEE-ECCS--STTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcc-cccc--cccccceeeccCceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEC
Confidence 45699999999999999887653221 1211 12356789999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg 161 (456)
|+.+|+++.++++++. ++|+|+|++|+|+|++ +.+++|++ +||+|+||||+++|+.|++.+++++||+++|||
T Consensus 204 s~~tp~t~~~l~~l~~----eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~lk~v~lELG 279 (504)
T 3ek1_A 204 ADLTPLTALALGVLAE----KAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTIKRISLELG 279 (504)
T ss_dssp CTTSCHHHHHHHHHHH----HTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGTCEEEEECC
T ss_pred CCcChHHHHHHHHHHH----HhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhhcCCeEecCC
Confidence 9999999998888764 7899999999999975 78999998 899999999999999999999999999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||+++++++
T Consensus 280 Gk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~ 359 (504)
T 3ek1_A 280 GNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAI 359 (504)
T ss_dssp CCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHH
T ss_pred CCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCccccCccccccCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCC
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 321 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~g 321 (456)
++++++|++++++|+++++||.. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 360 ~~v~~~i~~a~~~Ga~v~~gG~~------~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~G 433 (504)
T 3ek1_A 360 TKVKAHIEDAVSKGAKLITGGKE------LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFG 433 (504)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCE------EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCC
T ss_pred HHHHHHHHHHHHCCCEEEeCCcc------CCCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCC
Confidence 99999999999999999999973 358999999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEcc
Q 012790 322 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 322 L~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~ 392 (456)
|++||||+|.++++++++++++|+|+||+... ..+.+||||+|+||+|+++|++||++||+.|+|+.+.
T Consensus 434 L~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~~~ 502 (504)
T 3ek1_A 434 LAAYFYTENFSRAIRVSEALEYGMVGHNTGLI--SNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICSAY 502 (504)
T ss_dssp SEEEEECCBHHHHHHHHHHSCCSEEEESCSCC--CCSSSCBCCSGGGEESCBSTTTSGGGGEEEEEEEEEC
T ss_pred eEEEEEcCCHHHHHHHHHhCCcCeEEECCCCC--CCCCCCcCCcCcCcCCCCCcHHHHHHhhceEEEEEec
Confidence 99999999999999999999999999998653 2456999999999999999999999999999998753
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-88 Score=718.78 Aligned_cols=376 Identities=23% Similarity=0.410 Sum_probs=350.5
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++++.+|+.++..+.. .+...+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 131 a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~---~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKp 207 (538)
T 3qan_A 131 ADADTAEAIDFLEYYARQMIELNRGKEILSR---PGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKP 207 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCBCCCCC---TTEEEEEEEEECCEEEEECCSTTTTHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCeeeccc---CCcceeeecCCCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEEC
Confidence 4569999999999999997777776654432 2456789999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhcc------CCc
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKT------LTP 155 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~------~~p 155 (456)
|+.+|+++.++++++. ++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+++|+.|++.|+++ +||
T Consensus 208 s~~tp~ta~~l~~l~~----eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~lkp 283 (538)
T 3qan_A 208 ASTTPVVAAKFVEVLE----DAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKR 283 (538)
T ss_dssp CTTSHHHHHHHHHHHH----HTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCE
T ss_pred CCccHHHHHHHHHHHH----HhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhcccccccccc
Confidence 9999999998888764 7899999999999965 78999997 899999999999999999999998 999
Q ss_pred ccccCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccc
Q 012790 156 VTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGAL 235 (456)
Q Consensus 156 v~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl 235 (456)
+++|||||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++++|+|.++++++||+
T Consensus 284 v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl 363 (538)
T 3qan_A 284 VIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPV 363 (538)
T ss_dssp EEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCCBSCTTSTTCSBCCC
T ss_pred EEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhccCCCCCCCCCCCcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHH
Q 012790 236 CLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLA 315 (456)
Q Consensus 236 i~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~ 315 (456)
+++++++++.++|++++++| ++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++
T Consensus 364 i~~~~~~rv~~~i~~a~~~G-~~~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~a 438 (538)
T 3qan_A 364 IDEKAFEKIMSYIEIGKKEG-RLMTGGEGD----SSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIA 438 (538)
T ss_dssp SCHHHHHHHHHHHHHHHHHS-EEEECCCEE----CSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHCC-eEEeCCCcC----CCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEeCCHHHHHHHH
Confidence 99999999999999999999 999999742 2269999999999999999999999999999999999999999999
Q ss_pred hcCCCCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCC-CcchHHHHhccceeeEEEEcc
Q 012790 316 NDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 316 n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G-~~~g~~gl~~ft~~k~v~~~~ 392 (456)
|+++|||++||||+|.++++++++++++|+|+||+.......+.+||||+|+||+| ++||++||++||+.|+|+.+.
T Consensus 439 N~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~G~~gl~~ft~~k~v~~~~ 516 (538)
T 3qan_A 439 NNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQAKTVSEMY 516 (538)
T ss_dssp HCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCCCBTSTTTGGGGEEEEEEEEEC
T ss_pred hcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcccccHHHHHHhhCeEEEEEec
Confidence 99999999999999999999999999999999996444433467999999999999 999999999999999998864
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-88 Score=715.02 Aligned_cols=374 Identities=28% Similarity=0.483 Sum_probs=346.6
Q ss_pred HHHHHHHHHHHHHHHhhhhhhCCcccCCCcc-cccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecC
Q 012790 7 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRS-MIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 85 (456)
Q Consensus 7 ~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps 85 (456)
.|+..+++.++|+++.+++|.... .+.... ......+++++|+|||++|+|||||+.++++++++||++||+||+|||
T Consensus 136 ~Ev~~~~~~~~~~a~~~~~~~g~~-~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKps 214 (517)
T 2o2p_A 136 THVGMSIQTFRYFAGWCDKIQGAT-IPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPA 214 (517)
T ss_dssp TTTHHHHHHHHHHHHHGGGCCEEE-ECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcc-ccccccCCCCceEEEEecCCccEEEECCCcchHHHHHHHHHHHHHcCCEEEEECC
Confidence 689999999999999998876532 222100 112256899999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhh-ccCCcccccCC
Q 012790 86 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNAS-KTLTPVTLELG 161 (456)
Q Consensus 86 ~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa-~~~~pv~lElg 161 (456)
+.+|+++.++++++. ++|+|+|++|+|+|++ +.+++|++ +||+|+||||+++|+.|+++|+ +++||+++|||
T Consensus 215 ~~tp~ta~~l~~l~~----eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~aa~~~lk~v~lELG 290 (517)
T 2o2p_A 215 QVTPLTALKFAELTL----KAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELG 290 (517)
T ss_dssp TTCCHHHHHHHHHHH----HTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred CccHHHHHHHHHHHH----HhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhHHhcCCeEEEECC
Confidence 999999999888865 6899999999999965 77899988 8999999999999999999999 99999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
||||+||++|||++.|++.+++++|.|+||.|+|++|||||+++||+|+++|+++++++++|+|.++++++||+++++++
T Consensus 291 Gk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGdp~~~~~~~Gpli~~~~~ 370 (517)
T 2o2p_A 291 GKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHL 370 (517)
T ss_dssp CCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSSHHHH
T ss_pred CcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCccCCCcCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCC--HHHHHHHHhcCC
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNT--DEEVVKLANDSR 319 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~--~~eai~~~n~~~ 319 (456)
+++.++|++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+| +||||+++|+++
T Consensus 371 ~~v~~~i~~a~~~Ga~~~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~~deAi~~aN~~~ 446 (517)
T 2o2p_A 371 RKLVEYCQRGVKEGATLVCGGNQV----PRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATE 446 (517)
T ss_dssp HHHHHHHHHHHHTTCEEEECCSBC----SSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECTTCSHHHHHHHTCSS
T ss_pred HHHHHHHHHHHHCCCEEEeccccC----CCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCCCCHHHHHHHHhcCC
Confidence 999999999999999999999742 13689999999999999999999999999999999999 999999999999
Q ss_pred CCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEc
Q 012790 320 YGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 320 ~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~ 391 (456)
|||++||||+|.++++++++++++|+|+||++... .+.+||||+|+||+|+++|++||++||+.|+|+.+
T Consensus 447 ~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~--~~~~PfGG~k~SG~Gr~~G~~~l~~~~~~k~v~~~ 516 (517)
T 2o2p_A 447 FGLASGVFTRDINKALYVSDKLQAGTVFINTYNKT--DVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVTFE 516 (517)
T ss_dssp CCSCCEEECSBHHHHHHHHHHCCSSEEEESCSSCC--CTTSCBCCCGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred CCceEEEeCCCHHHHHHHHHhcCEeEEEECCCCCC--CCCCCcCCcCcCCcCccChHHHHHHhCCceEEEee
Confidence 99999999999999999999999999999987432 35699999999999999999999999999999763
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-88 Score=714.52 Aligned_cols=372 Identities=32% Similarity=0.542 Sum_probs=346.7
Q ss_pred HHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecCC
Q 012790 7 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 86 (456)
Q Consensus 7 ~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~ 86 (456)
.|+..+++.++|+++.+++|.+.. .+.+ .+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+
T Consensus 108 ~Ev~~~~~~~~~~a~~~~~~~g~~-~~~~---~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~ 183 (495)
T 3b4w_A 108 MHWMGSMGAMNYFAGAADKVTWTE-TRTG---SYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAA 183 (495)
T ss_dssp TTTHHHHHHHHHHHTCGGGSCSEE-EEEE---TTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECBT
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCc-ccCC---CCceEEEEEccCceEEEECCCcchHHHHHHHHHHHHHcCCEEEEecCC
Confidence 689999999999999999886532 2211 123568999999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCCcc
Q 012790 87 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD 164 (456)
Q Consensus 87 ~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgGk~ 164 (456)
.+|+++.++++++. ++|+|+|++|+|+|+.+.+++|++ ++|+|+||||+++|+.|+++|++++||+++||||||
T Consensus 184 ~tp~t~~~l~~l~~----eaGlP~gvv~vv~g~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~l~pv~lELGGk~ 259 (495)
T 3b4w_A 184 ETPLTANALAEVFA----EVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAEMLKPCTLELGGKS 259 (495)
T ss_dssp TSCHHHHHHHHHHH----HTTCCTTSEEECCBSHHHHHHHTTCTTCCEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCE
T ss_pred ccHHHHHHHHHHHH----HhCCCcCeEEEEeCCHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcCCceeecCCCcc
Confidence 99999999988875 689999999999995578999997 899999999999999999999999999999999999
Q ss_pred eEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHHHH
Q 012790 165 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKL 244 (456)
Q Consensus 165 p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v 244 (456)
|+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++++|+|.++++++||++++++++++
T Consensus 260 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv 339 (495)
T 3b4w_A 260 AAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRV 339 (495)
T ss_dssp EEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTCTTCCBCCCSCHHHHHHH
T ss_pred eEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCccCCCccCCCcCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCcee
Q 012790 245 QNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGC 324 (456)
Q Consensus 245 ~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~ 324 (456)
+++|++++++|+++++||..... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++
T Consensus 340 ~~~i~~a~~~Ga~~~~gG~~~~~--~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a 417 (495)
T 3b4w_A 340 EGYIAKGIEEGARLVCGGGRPEG--LDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAG 417 (495)
T ss_dssp HHHHHHHHHTTCEEEECCSCCTT--CTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCC
T ss_pred HHHHHHHHhCCCEEEecCccccc--ccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCHHHHHHHHhcCCCCeEE
Confidence 99999999999999999974210 1258999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEc
Q 012790 325 AVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 325 ~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~ 391 (456)
||||+|.++++++++++++|+|+||++. ..+.+||||+|.||+|+++|++||++||+.|+|+.+
T Consensus 418 ~v~t~d~~~a~~~~~~l~aG~V~iN~~~---~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~k~v~~~ 481 (495)
T 3b4w_A 418 SVWTTDVPKGIKISQQIRTGTYGINWYA---FDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVLLP 481 (495)
T ss_dssp EEECSCHHHHHHHHHHSCCSCCEESSCC---CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEECC
T ss_pred EEECCCHHHHHHHHHhCCEeEEEECCCC---CCCCCCCCCCCCCCcCccchHHHHHHhcceeEEEEc
Confidence 9999999999999999999999999875 245699999999999999999999999999999764
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-87 Score=704.72 Aligned_cols=374 Identities=29% Similarity=0.539 Sum_probs=351.2
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++.+++|..+.. .. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 86 a~~ev~~~~~~~~~~a~~~~~~~~~~~--~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKp 161 (462)
T 3etf_A 86 ARAEVTKSAALCDWYAEHGPAMLNPEP--TL--VENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKH 161 (462)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSCEE--CS--SGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHhHHHhcCCcc--cC--CCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEEC
Confidence 457999999999999999998876542 11 13456789999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgG 162 (456)
|+.+|+++.++++++ .++|+|+|++|+|+|+.+.+.+|++ ++|+|+||||+++|+.|++.++++++|++|||||
T Consensus 162 s~~tp~~~~~l~~~l----~~aglP~gv~~vv~g~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGG 237 (462)
T 3etf_A 162 APNVTGCAQMIARIL----AEAGTPAGVYGWVNANNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGG 237 (462)
T ss_dssp CTTCHHHHHHHHHHH----HHTTCCBTTEEECCCCHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCCCcHHHHHHHHHH----HHhCCCcCeEEEEECCHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhccCCceEEEcCC
Confidence 999999998888775 4789999999999998888889987 8999999999999999999999999999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHH
Q 012790 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 242 (456)
Q Consensus 163 k~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~ 242 (456)
|||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++++++
T Consensus 238 k~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~ 317 (462)
T 3etf_A 238 SDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRD 317 (462)
T ss_dssp CEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHH
T ss_pred CCccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCc
Q 012790 243 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 322 (456)
Q Consensus 243 ~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL 322 (456)
++++++++++++|+++++||... +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||
T Consensus 318 ~v~~~i~~a~~~ga~~~~gg~~~----~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL 393 (462)
T 3etf_A 318 ELHQQVQASVAEGARLLLGGEKI----AGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGL 393 (462)
T ss_dssp HHHHHHHHHHHTTCEEEECCSBC----SSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCS
T ss_pred HHHHHHHHHHHCCCEEEeCCccc----CCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCc
Confidence 99999999999999999999742 34799999999999999999999999999999999999999999999999999
Q ss_pred eeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEcc
Q 012790 323 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 323 ~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~ 392 (456)
++||||+|.++++++++++++|+|+||++... .+.+||||+|+||+|++||++||++||+.|+|+.++
T Consensus 394 ~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~--~~~~PfGG~k~SG~G~~~g~~g~~~~~~~k~v~~~r 461 (462)
T 3etf_A 394 SATIFTADDTLAAEMAARLECGGVFINGYSAS--DARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKNR 461 (462)
T ss_dssp CEEEECSCHHHHHHHHHHCCSSEEEESSCCCC--CTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEECC
T ss_pred eEEEECCCHHHHHHHHHhCCcceEEECCCCCC--CCCCCcCCcCCCCCCccchHHHHHHHhceeEEEEec
Confidence 99999999999999999999999999997543 456999999999999999999999999999998865
|
| >4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-88 Score=710.43 Aligned_cols=388 Identities=29% Similarity=0.437 Sum_probs=359.2
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
...|+..+++.++|++..+.++++++...... .....+..++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 84 ~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VVlKp 161 (474)
T 4h7n_A 84 TVLEIDSFLASIDRWCGLAPELLQTSAKNTSI--PFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVVVKP 161 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCEEEECSS--TTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHhhhhhcccccccCCCC--CCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCceeecc
Confidence 34689999999999999999998766543322 2345577899999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHhccCEEEecCCHHHHHHHHHHhhccCCcccccCCCcc
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD 164 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgGk~ 164 (456)
|+.+|+++..+++++ .++|+|+|++++++|+.+.+..|+.++|+|+||||+.+|+.|++.+++++||++|||||||
T Consensus 162 s~~tp~~~~~l~~~~----~~ag~p~gv~~~v~g~~~~~~~l~~~v~~v~FTGS~~~G~~i~~~aa~~~~~v~lElGGk~ 237 (474)
T 4h7n_A 162 SEIAPRFVAPLLMAL----NTVPELRDVLIFVEGGGETGANLINYVDFVCFTGSVATGREVAETAARRFIPAYLELGGKD 237 (474)
T ss_dssp CTTSCTTHHHHHHHH----TTCTTTTTTEEECCCCHHHHHHHHTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEECCCCE
T ss_pred cccCchHHHHHHhhh----hhhcccccceeeccccchhhhhhhhccceEEeccccchhhhhhhhhhcccccccccCCCcC
Confidence 999999998887765 4789999999999998899999988999999999999999999999999999999999999
Q ss_pred eEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHHHH
Q 012790 165 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKL 244 (456)
Q Consensus 165 p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v 244 (456)
|+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|.++++++||++++.+++++
T Consensus 238 p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v 317 (474)
T 4h7n_A 238 PAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGII 317 (474)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHHH
T ss_pred ccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCcee
Q 012790 245 QNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGC 324 (456)
Q Consensus 245 ~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~ 324 (456)
.+++++++++|+++++||... ....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++
T Consensus 318 ~~~i~~a~~~ga~v~~Gg~~~---~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a 394 (474)
T 4h7n_A 318 NDHILDAVEKGAVIHCGGKVE---ELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSA 394 (474)
T ss_dssp HHHHHHHHHTTCEEEECCCCE---EETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEE
T ss_pred HHHHHHHHhhCceeccCCccc---ccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeE
Confidence 999999999999999999742 12468999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCC-CcchHHHHhccceeeEEEEcccccccccCCCC
Q 012790 325 AVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKSVVEDRWWPYIKTKIPK 403 (456)
Q Consensus 325 ~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G-~~~g~~gl~~ft~~k~v~~~~~~~~~~~~~~~ 403 (456)
||||+|.++++++++++++|+|+||+...+...+.+||||+|.||+| +++|.+|+++|++.|+|+++.. ..+.
T Consensus 395 ~v~t~d~~~a~~~a~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g~~~f~~~k~v~~~~~------~~~~ 468 (474)
T 4h7n_A 395 AVFAGSEDEALKVARQLNAGAISINDAALTAMMHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFLIKTN------STSD 468 (474)
T ss_dssp EEECSSHHHHHHHHTTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESCCSSTTHHHHTTEEEEEEEEECS------SSCC
T ss_pred EEEeCCHHHHHHHHHhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCCCcchHHHHHHhCeEEEEEECCC------CCCC
Confidence 99999999999999999999999999877766677999999999998 8999999999999999998764 3455
Q ss_pred CCCC
Q 012790 404 PIQY 407 (456)
Q Consensus 404 ~~~~ 407 (456)
|+||
T Consensus 469 p~w~ 472 (474)
T 4h7n_A 469 PWWF 472 (474)
T ss_dssp TTSC
T ss_pred CCCc
Confidence 6676
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-88 Score=708.57 Aligned_cols=374 Identities=30% Similarity=0.487 Sum_probs=349.0
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++++++|.++.. +.. ..+...+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 101 a~~ev~~~~~~l~~~a~~~~~~~~~~~-~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKp 177 (479)
T 2imp_A 101 AEVEVAFTADYIDYMAEWARRYEGEII-QSD--RPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKP 177 (479)
T ss_dssp HHHHHHHHHHHHHHHHTTTTTCCCEEE-CCS--STTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCcc-ccC--CCCceeEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEEC
Confidence 457999999999999999988876532 221 12346789999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg 161 (456)
|+.+|+++.++++++. ++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+++|+.|+++|++++||+++|||
T Consensus 178 s~~tp~t~~~l~~l~~----~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElG 253 (479)
T 2imp_A 178 SEFTPNNAIAFAKIVD----EIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELG 253 (479)
T ss_dssp CTTSCHHHHHHHHHHH----HHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHTTTCEEEEECC
T ss_pred CccchHHHHHHHHHHH----HhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhccCCcEEEEcC
Confidence 9999999999988865 6899999999999975 67899987 899999999999999999999999999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCC-CCCccccccCHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA-GKYDMGALCLLEH 240 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~-~~~~~gpli~~~~ 240 (456)
||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+ +++++||++++.+
T Consensus 254 Gk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~~gpli~~~~ 333 (479)
T 2imp_A 254 GKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAA 333 (479)
T ss_dssp CCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCSSCSBCCCSSHHH
T ss_pred CcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCccccCCCccCCCcCHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred HHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCC
Q 012790 241 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRY 320 (456)
Q Consensus 241 ~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~ 320 (456)
+++++++|++++++|+++++||... +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|
T Consensus 334 ~~rv~~~i~~a~~~Ga~~~~gG~~~----~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~ 409 (479)
T 2imp_A 334 LERVEQKVARAVEEGARVAFGGKAV----EGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDY 409 (479)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCCCC----CSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHHHHHHHHHCSSE
T ss_pred HHHHHHHHHHHHHCCCEEEECCccc----CCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHHHHHHHHhcCCC
Confidence 9999999999999999999999742 235899999999999999999999999999999999999999999999999
Q ss_pred CceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEc
Q 012790 321 GLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 321 gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~ 391 (456)
||++||||+|.++++++++++++|.|+||++..+ .+.+||||+|+||+|++||++||++||+.|+|+.+
T Consensus 410 gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~ 478 (479)
T 2imp_A 410 GLTSSIYTQNLNVAMKAIKGLKFGETYINRENFE--AMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQ 478 (479)
T ss_dssp ESEEEEECCCHHHHHHHHHHCCSSEEEESSCCCC--CTTSCBCCEETTEESCBSHHHHHHTTEEEEEEEEE
T ss_pred CeeEEEECCCHHHHHHHHHhCCEeEEEECCCCCC--CCCCCCCCCCCCCCCCCchHHHHHHhcCeeEEEec
Confidence 9999999999999999999999999999997655 35699999999999999999999999999999764
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-88 Score=713.27 Aligned_cols=372 Identities=27% Similarity=0.468 Sum_probs=347.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecC
Q 012790 6 LGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 85 (456)
Q Consensus 6 ~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps 85 (456)
..|+..+++.++|+++.++++... ..+.. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus 121 ~~ev~~~~~~l~~~a~~~~~~~~~-~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKPs 197 (498)
T 4f3x_A 121 NDELPAIIDCWRFFAGAVRNLHAP-AAGEY--LPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAPAIGGGNTVVFKPS 197 (498)
T ss_dssp HTHHHHHHHHHHHHHHHTTCCEEE-CBEEE--ETTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCc-cccCC--cccccceEEEcCcceEEEECCCchHHHHHHHHHHHHHHcCCeEEEECC
Confidence 569999999999999999886432 21111 124567899999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCC
Q 012790 86 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162 (456)
Q Consensus 86 ~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgG 162 (456)
+.+|+++.++++++. ++ +|+|++|+|+|++ +.+++|++ ++|+|+||||+++|+.|+++|++++||+++||||
T Consensus 198 ~~tp~t~~~l~~l~~----ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~k~v~lElGG 272 (498)
T 4f3x_A 198 EQTPLTALKLARLIA----DI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAAAKTVKRTHLELGG 272 (498)
T ss_dssp TTCCHHHHHHHHHHH----TT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCC
T ss_pred cccHHHHHHHHHHHH----Hh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHHhhCCceeecCCC
Confidence 999999999998875 56 9999999999965 68999998 8999999999999999999999999999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHH
Q 012790 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 242 (456)
Q Consensus 163 k~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~ 242 (456)
|||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||++++.+++
T Consensus 273 k~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d~~~~~Gpli~~~~~~ 352 (498)
T 4f3x_A 273 KAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRD 352 (498)
T ss_dssp CEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCSSGGGCSSCCCSCHHHHH
T ss_pred CCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCCccccCccccCcCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCC-eEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCC
Q 012790 243 KLQNLVNDALDKGA-EILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 321 (456)
Q Consensus 243 ~v~~~i~~a~~~Ga-~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~g 321 (456)
++.++|++++++|+ ++++||... +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 353 ~v~~~i~~a~~~Ga~~v~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~G 428 (498)
T 4f3x_A 353 RVASFVERAADQKHIEITTGGRTG----SDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYG 428 (498)
T ss_dssp HHHHHHHHHHHSTTCEEEECCSBC----CSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTTSCHHHHHHSSSCC
T ss_pred HHHHHHHHHHHCCCCEEEECCccC----CCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCHHHHHHHHhcCCCC
Confidence 99999999999999 999999742 3479999999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEc
Q 012790 322 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 322 L~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~ 391 (456)
|++||||+|.++++++++++++|+|+||++..+. +.+||||+|+||+|+++|++||++||+.|+|+.+
T Consensus 429 L~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~--~~~PfGG~k~SG~Gr~~G~~~l~~~t~~k~v~~~ 496 (498)
T 4f3x_A 429 LASSVWTKDISKAMRAASRLQYGCTWINTHFMLT--NEMPHGGIKQSGYGKDMSVYALEDYTAVRHIMIN 496 (498)
T ss_dssp SEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCC--TTSCBCCSGGGEECCBSHHHHHHHTEEEEEEEEE
T ss_pred ceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCC--CCCCcCCcCcCCcCccchHHHHHHhhceEEEEEe
Confidence 9999999999999999999999999999986653 5699999999999999999999999999999764
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-87 Score=710.08 Aligned_cols=378 Identities=27% Similarity=0.448 Sum_probs=348.1
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++.+++|... ..+.. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 121 a~~ev~~~~~~l~~~a~~~~~~~g~-~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKp 197 (515)
T 2d4e_A 121 VRAQVARAAENFAFYAEYAEHAMED-RTFPV--DRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKP 197 (515)
T ss_dssp HHHHHHHHHHHHHHHHTTGGGTTCE-EECCB--TTTEEEEEEEEECCCEEEECCSSSHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCc-ccccC--CCCceeEEEEecCCceEEECCCCchhhhhhhhhhHHHHcCCeeeecC
Confidence 3479999999999999999888643 22221 12345789999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg 161 (456)
|+.+|+++.++++++. ++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+.+|+.|+++|++++||+++|||
T Consensus 198 s~~tp~t~~~l~~l~~----eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~~l~~v~lELG 273 (515)
T 2d4e_A 198 AEWSPFTATKLAEILK----EADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLKRLSPELG 273 (515)
T ss_dssp CTTSCHHHHHHHHHHH----HTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGTCEEEEECC
T ss_pred CCCcHHHHHHHHHHHH----HhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhcCCceEecCC
Confidence 9999999999888865 7899999999999975 78899987 899999999999999999999999999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++++|+|.++++++||+++++|+
T Consensus 274 Gk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~ 353 (515)
T 2d4e_A 274 GKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHL 353 (515)
T ss_dssp CCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSCHHHH
T ss_pred CcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccCccCCCcCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCC----CCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhc
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHL----SEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAND 317 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~----~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~ 317 (456)
++++++|++++++|+++++||..... +....|+|++|||+.+ +++|++++||+||||++|++|+|+||||+++|+
T Consensus 354 ~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~ 432 (515)
T 2d4e_A 354 QRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEEEALRKAND 432 (515)
T ss_dssp HHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEeeCCHHHHHHHHhc
Confidence 99999999999999999999974210 0002589999999999 999999999999999999999999999999999
Q ss_pred CCCCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEcc
Q 012790 318 SRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 318 ~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~ 392 (456)
++|||++||||+|.++++++++++++|+|+||++.. ..+.+||||+|+||+|++||++||++||+.|+|+.+.
T Consensus 433 ~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~K~v~~~~ 505 (515)
T 2d4e_A 433 TKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNV--RHLPTPFGGVKGSGDRREGGTYALDFYTDLKTIALPL 505 (515)
T ss_dssp SSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSCC--CCTTSCBCCSGGGBCSCBSHHHHHHHHEEEEEEEEES
T ss_pred CCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCC--CCCCCCCCCcCCCCCCccchHHHHHHhCceeEEEEcC
Confidence 999999999999999999999999999999999754 2456999999999999999999999999999998863
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-87 Score=704.79 Aligned_cols=369 Identities=30% Similarity=0.505 Sum_probs=342.0
Q ss_pred HHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEE-EecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecC
Q 012790 7 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVE-FHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 85 (456)
Q Consensus 7 ~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps 85 (456)
.|+..+++.++|+++.+++|..+.... .+...+++ ++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus 123 ~ev~~~~~~~~~~a~~~~~~~~~~~~~-----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps 197 (497)
T 3i44_A 123 AQTATGSSHIRNFIKAYKEFSFQEALI-----EGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPS 197 (497)
T ss_dssp THHHHHHHHHHHHHHHHHHCCSEEESS-----TTCSSCEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHhhccccccccc-----CCceeEEEeecCceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECC
Confidence 699999999999999988876543221 12346788 999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCC
Q 012790 86 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162 (456)
Q Consensus 86 ~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgG 162 (456)
+.+|+++.++++++. ++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+++|+.|++.|++++||+++||||
T Consensus 198 ~~tp~t~~~l~~l~~----eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~~~aa~~~k~v~lElGG 273 (497)
T 3i44_A 198 EIAPLSAMLFAEILD----EAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNASNTLKRVCLELGG 273 (497)
T ss_dssp TTSCHHHHHHHHHHH----HTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCC
T ss_pred cccHHHHHHHHHHHH----HhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhcCCceeeccCC
Confidence 999999998888764 7899999999999965 78999987 8999999999999999999999999999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHH
Q 012790 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 242 (456)
Q Consensus 163 k~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~ 242 (456)
|||+||++||| +.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||++++++++
T Consensus 274 k~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~ 352 (497)
T 3i44_A 274 KGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYD 352 (497)
T ss_dssp CCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSCSSCBCCCSCHHHHH
T ss_pred CCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHH
Confidence 99999999999 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCc
Q 012790 243 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 322 (456)
Q Consensus 243 ~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL 322 (456)
+++++|++++++|+++++||..... ....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||
T Consensus 353 ~v~~~i~~a~~~Ga~v~~gG~~~~~-~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL 431 (497)
T 3i44_A 353 KIQDLIQSGIDEGATLVTGGTGLPM-GMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGL 431 (497)
T ss_dssp HHHHHHHHHHHTTCEEEECCSSCCT-TCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCS
T ss_pred HHHHHHHHHHHCCCEEEECCCcCCC-cCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecCCHHHHHHHHhCCCCCc
Confidence 9999999999999999999942111 123699999999999999999999999999999999999999999999999999
Q ss_pred eeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEE
Q 012790 323 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389 (456)
Q Consensus 323 ~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~ 389 (456)
++||||+|.++++++++++++|+|+||+. ...+.+||||+|+||+|+++|++||++||+.|+|+
T Consensus 432 ~a~v~t~d~~~a~~~a~~l~aG~V~iN~~---~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~ 495 (497)
T 3i44_A 432 TNYIQSQDRSKCRRIAAQVRSGMVEVNGH---ELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAIS 495 (497)
T ss_dssp EEEEECSCHHHHHHHHHHSCCSEEEETTC---CCCTTCCBCCSGGGCCCCBSHHHHHHTTEEEEEES
T ss_pred EEEEECCCHHHHHHHHHhCCcCeEEECCC---CCCCCCCcCCcCcCcCCccchHHHHHHhcceeEEE
Confidence 99999999999999999999999999952 22456999999999999999999999999999985
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-87 Score=706.58 Aligned_cols=372 Identities=26% Similarity=0.476 Sum_probs=345.0
Q ss_pred hHH-HHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEe
Q 012790 5 SLG-EIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIK 83 (456)
Q Consensus 5 ~~~-Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlK 83 (456)
+.. |+..+++.++|+++.+++|.. +..+.. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|
T Consensus 117 a~~~Ev~~~~~~~~~~a~~~~~~~g-~~~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlK 193 (495)
T 1wnd_A 117 AFNDEIPAIVDVFRFFAGAARCLNG-LAAGEY--LEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLK 193 (495)
T ss_dssp HHHTHHHHHHHHHHHHHHHTTCCEE-ECBEEE--ETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC-ccccCC--CCCceeEEeeecCCeEEEECCCcchHHHHHHHHHHHHHcCCeeEee
Confidence 345 999999999999999988753 222211 1233568999999999999999999999999999999999999999
Q ss_pred cCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccC
Q 012790 84 VSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 160 (456)
Q Consensus 84 ps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lEl 160 (456)
||+.+|+++.++++++. ++ +|+|++|+|+|++ +.+++|++ ++|+|+||||+++|+.|+++|++++||+++||
T Consensus 194 ps~~tp~t~~~l~~l~~----ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~l~~v~lEL 268 (495)
T 1wnd_A 194 PSEITPLTALKLAELAK----DI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMEL 268 (495)
T ss_dssp CCTTCCHHHHHHHHHHT----TT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHGGGTCEEEEEC
T ss_pred CCCCChHHHHHHHHHHH----Hh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHhcCCcccccc
Confidence 99999999999998876 46 9999999999954 78999998 79999999999999999999999999999999
Q ss_pred CCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHH
Q 012790 161 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 240 (456)
Q Consensus 161 gGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~ 240 (456)
|||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++++|+|.++++++||++++++
T Consensus 269 GGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~ 348 (495)
T 1wnd_A 269 GGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAH 348 (495)
T ss_dssp CCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTCCBCCCSCHHH
T ss_pred CCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcC-CeEeecCC-CCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcC
Q 012790 241 SEKLQNLVNDALDKG-AEILARGS-FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDS 318 (456)
Q Consensus 241 ~~~v~~~i~~a~~~G-a~v~~gG~-~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~ 318 (456)
+++++++|++++++| +++++||. .. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|++
T Consensus 349 ~~rv~~~i~~a~~~G~a~~~~gG~~~~-----~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~ 423 (495)
T 1wnd_A 349 LERVGKAVEEAKATGHIKVITGGEKRK-----GNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDS 423 (495)
T ss_dssp HHHHHHHHHHHHHTSSCEEEECCSBCS-----SSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHhCCCeEEEECCcccC-----CCCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCHHHHHHHHhcC
Confidence 999999999999999 99999996 31 258999999999999999999999999999999999999999999999
Q ss_pred CCCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEc
Q 012790 319 RYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 319 ~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~ 391 (456)
+|||++||||+|.++++++++++++|+|+||++... .+.+||||+|.||+|+++|++||++||+.|+|+.+
T Consensus 424 ~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~--~~~~PfGG~k~SG~Gr~~G~~gl~~f~~~k~v~~~ 494 (495)
T 1wnd_A 424 QYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFML--VSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVK 494 (495)
T ss_dssp SCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCC--CTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred CCCeeEEEECCCHHHHHHHHHhCCcceEEECCCCCC--CCCCCCCCCCcCcCCccchHHHHHHhhCeEEEEec
Confidence 999999999999999999999999999999987542 35699999999999999999999999999999763
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-87 Score=703.09 Aligned_cols=374 Identities=29% Similarity=0.526 Sum_probs=346.3
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|++..+.+.... ..+.. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 104 a~~ev~~~~~~~~~~a~~~~~~~~~-~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKp 180 (481)
T 3jz4_A 104 AKGEISYAASFIEWFAEEGKRIYGD-TIPGH--QADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKP 180 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGCCEE-EECCS--STTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCc-ccccc--CCCceEEEEEcCccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEC
Confidence 4569999999999999887764322 11211 12456789999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg 161 (456)
|+.+|+++.++++++. ++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+++|+.|++.++++++|+++|||
T Consensus 181 s~~tp~~~~~l~~l~~----~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa~~~~~v~lElG 256 (481)
T 3jz4_A 181 ASQTPFSALALAELAI----RAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELG 256 (481)
T ss_dssp CTTSCHHHHHHHHHHH----HHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTTTTCEEEEECC
T ss_pred CCCCcHHHHHHHHHHH----HhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcCCceEEecC
Confidence 9999999998888764 6899999999999964 78899997 899999999999999999999999999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||+++++++
T Consensus 257 Gk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~ 336 (481)
T 3jz4_A 257 GNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAV 336 (481)
T ss_dssp CCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHH
T ss_pred CCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccCcCccccccCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCC
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 321 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~g 321 (456)
++++++|++++++|+++++||... +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 337 ~~v~~~i~~a~~~Ga~v~~gg~~~----~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~g 412 (481)
T 3jz4_A 337 AKVEEHIADALEKGARVVCGGKAH----ERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFG 412 (481)
T ss_dssp HHHHHHHHHHHHTTCEEEECCSBC----TTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCC
T ss_pred HHHHHHHHHHHHCCCEEEeCCccc----CCCCceeccEEEecCCCCcccccccccCceEEEEEECCHHHHHHHHhcCCCC
Confidence 999999999999999999999742 3458999999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEc
Q 012790 322 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 322 L~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~ 391 (456)
|++||||+|.++++++++++++|.|+||++... .+.+||||+|+||+|++||++||++||+.|+|+..
T Consensus 413 L~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~g~~~~t~~k~v~~~ 480 (481)
T 3jz4_A 413 LAAYFYARDLSRVFRVGEALEYGIVGINTGIIS--NEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 480 (481)
T ss_dssp SEEEEECCBHHHHHHHHHHCCCSEEEESCSCCC--CSSSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred ceEEEECCCHHHHHHHHHhCCeeeEEECCCCCC--CCCCCcCCcccCcCCCCchHHHHHHhhceeEEEEe
Confidence 999999999999999999999999999997543 35699999999999999999999999999999763
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-87 Score=707.65 Aligned_cols=373 Identities=26% Similarity=0.419 Sum_probs=345.6
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccc--cccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEE
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI--HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVI 82 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~Vvl 82 (456)
+..|+..+++.++|+++++++|.. +..+...... ....+++++|+|||++|+|||||+.++++++++||++||+||+
T Consensus 112 a~~Ev~~~~~~l~~~a~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVl 190 (501)
T 1uxt_A 112 AVGEVKAAVDRLRLAELDLKKIGG-DYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVV 190 (501)
T ss_dssp HHHHHHHHHHHHHTGGGGGGGTCC-EEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC-ccccccccCCCcCceEEEEEeeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEE
Confidence 347999999999999999988743 3222211011 2256899999999999999999999999999999999999999
Q ss_pred ecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccC
Q 012790 83 KVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 160 (456)
Q Consensus 83 Kps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lEl 160 (456)
|||+.+|+++.++++++. ++|+|+|++|+|+|+++.+++|++ ++|+|+||||+++|+.|+++|+ +||+++||
T Consensus 191 Kps~~tp~t~~~l~~l~~----eaGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~G~~i~~~aa--l~~v~lEL 264 (501)
T 1uxt_A 191 KPSISDPLPAAMAVKALL----DAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG--VKQYVMEL 264 (501)
T ss_dssp ECCTTSCHHHHHHHHHHH----HTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHC--SSEEEEEC
T ss_pred eCCCCchHHHHHHHHHHH----HhCCCcCeEEEEeCCcHHHHHHHhCCCcCEEEEeCcHHHHHHHHHhcC--CCeEEEEc
Confidence 999999999999988865 689999999999997777899987 8999999999999999999988 99999999
Q ss_pred CCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHH
Q 012790 161 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 240 (456)
Q Consensus 161 gGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~ 240 (456)
|||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++++|+|.++++++||++++++
T Consensus 265 GGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~ 344 (501)
T 1uxt_A 265 GGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSA 344 (501)
T ss_dssp CCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHH
T ss_pred CCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCccccCCcccCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCC-ccccceeeecCC---CCCccchhccccCceeEeeeCCHHHHHHHHh
Q 012790 241 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVD-QYFPPTVIVNVN---HTMKLMQEEAFGPIMPIMKFNTDEEVVKLAN 316 (456)
Q Consensus 241 ~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g-~~~~Ptvl~~v~---~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n 316 (456)
+++++++|++++++|+++++||.. .| +|++|||+.+++ ++|++++||+||||++|++|+|+||||+++|
T Consensus 345 ~~rv~~~i~~a~~~Ga~~~~gG~~-------~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN 417 (501)
T 1uxt_A 345 VDEMMAAIEDAVEKGGRVLAGGRR-------LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELAN 417 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCCB-------CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEeCCcc-------CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEeeCCHHHHHHHHh
Confidence 999999999999999999999972 57 999999999999 9999999999999999999999999999999
Q ss_pred cCCCCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEcc
Q 012790 317 DSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 317 ~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~ 392 (456)
+++|||++||||+|.++++++++++++|+|+||+++ +...+.+||||+|+||+|++||++||++||+.|+|+.+.
T Consensus 418 ~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~-~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~~~ 492 (501)
T 1uxt_A 418 GRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMP-RHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVFNY 492 (501)
T ss_dssp TSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCC-CCTTSSSCBCCEETTEESCBSTTTTHHHHEEEEEEEEEC
T ss_pred cCCCCcEEEEeCCCHHHHHHHHHhCCEeeEEEeCCC-CCCCCCCCCCCcCCCCCCccChHHHHHHhCceeEEEEec
Confidence 999999999999999999999999999999999874 233467999999999999999999999999999998864
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-87 Score=706.08 Aligned_cols=374 Identities=29% Similarity=0.427 Sum_probs=331.1
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++.+++... ..+.. ...+...+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 107 a~~Ev~~~~~~~~~~a~~~~~~~~--~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKp 183 (508)
T 3r64_A 107 ANLEITLAGNITKESASFPGRVHG--RISPS-NTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKP 183 (508)
T ss_dssp HHHHHHHHHHHHHHHTTSTTTCCE--EEECC-SSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHhhhhcC--ccccc-CCCCceeEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCEEEEEC
Confidence 456999999999999998876433 22211 012356789999999999999999999999999999999999999999
Q ss_pred CCCChhHH-HHHHHHHHHHHHHcCCCCCcEEEEeCC-hHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhc--cCCcccc
Q 012790 85 SENASWSG-CFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASK--TLTPVTL 158 (456)
Q Consensus 85 s~~~p~~~-~~l~~l~~~~l~~aGlp~g~v~vv~g~-~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~--~~~pv~l 158 (456)
|+.+|+++ .++++++ .++|+|+|++|+|+|+ .+.+++|++ ++|+|+||||+++|+.|+++|++ ++||+++
T Consensus 184 s~~tp~t~~~~l~~ll----~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~aa~~~~l~~v~l 259 (508)
T 3r64_A 184 ASDTPVTGGVIPARIF----EEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAINGGPMKTVAL 259 (508)
T ss_dssp CTTCHHHHTHHHHHHH----HTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHHHHHHHSSSSCCEEEE
T ss_pred CCCChHHHHHHHHHHH----HHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHHHHHhhcccCCCceEe
Confidence 99999999 8887775 5799999999999997 478999998 89999999999999999999998 9999999
Q ss_pred cCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCH
Q 012790 159 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLL 238 (456)
Q Consensus 159 ElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~ 238 (456)
|||||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++++|+|.++++++||++++
T Consensus 260 ElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~ 339 (508)
T 3r64_A 260 ELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVIND 339 (508)
T ss_dssp ECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSSSCCBCCCSCH
T ss_pred ecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccCCCCccCCCcccCCCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcC
Q 012790 239 EHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDS 318 (456)
Q Consensus 239 ~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~ 318 (456)
++++++++++++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|++
T Consensus 340 ~~~~~v~~~i~~a~~~Ga~v~~gG~~-------~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~ 412 (508)
T 3r64_A 340 SQLSGLKEKIELAKKEGATVQVEGPI-------EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANAS 412 (508)
T ss_dssp HHHHHHHHHHHHHHTTTCEEEECCCE-------ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTSS
T ss_pred HHHHHHHHHHHHHHHcCCEEEecCCC-------CCcEEecEEEecCCCCChhhcccccCceEEEEEeCCHHHHHHHHhCC
Confidence 99999999999999999999999972 68999999999999999999999999999999999999999999999
Q ss_pred CCCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEccc
Q 012790 319 RYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRW 393 (456)
Q Consensus 319 ~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~~ 393 (456)
+|||++||||+|.++++++++++++|+|+||++..+ ..+.+||||+|+||+|++||++||++||+.|+|+.+..
T Consensus 413 ~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~-~~~~~PfGG~~~SG~Gr~~G~~~l~~ft~~k~v~~~~~ 486 (508)
T 3r64_A 413 DFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVN-DEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRWIGIKRS 486 (508)
T ss_dssp SCCSCEEEECSCHHHHHHHHTTSCSSEEEECC---------------------CCCHHHHHHHTEEEEEEEEECC
T ss_pred CCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCCCCC-CCCCCCcCCcCCCCCCcCccHHHHHHhhceEEEEEecc
Confidence 999999999999999999999999999999998655 34679999999999999999999999999999988764
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-87 Score=704.29 Aligned_cols=373 Identities=30% Similarity=0.516 Sum_probs=346.3
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++.++++. .+..+.. ..+...+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 105 a~~ev~~~~~~~~~~a~~~~~~~-g~~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKp 181 (487)
T 2w8n_A 105 AHGEILYSAFFLEWFSEEARRVY-GDIIHTP--AKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKP 181 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGCC-CEEECCS--CTTCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc-CcccccC--CCCceeEEEEecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEC
Confidence 45699999999999999988743 3332221 12346789999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEe---CCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccc
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVIT---GFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTL 158 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~---g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~l 158 (456)
|+.+|+++.++++++. ++|+|+|++|+|+ |++ +.+++|++ ++|+|+||||+++|+.|+++|++++||+++
T Consensus 182 s~~tp~t~~~l~~l~~----~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~pv~l 257 (487)
T 2w8n_A 182 AEDTPFSALALAELAS----QAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVKRVSM 257 (487)
T ss_dssp CTTCCHHHHHHHHHHH----HHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHHHHTTTCEEEE
T ss_pred CCcchHHHHHHHHHHH----HhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhccCCcEEE
Confidence 9999999999888764 6899999999999 854 67899997 799999999999999999999999999999
Q ss_pred cCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhc-cccCCCCCCCCccccccC
Q 012790 159 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS-VSAGPPLAGKYDMGALCL 237 (456)
Q Consensus 159 ElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~-~~~g~~~~~~~~~gpli~ 237 (456)
|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++ +++|+|.++++++||+++
T Consensus 258 ElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~~~~~~~gpli~ 337 (487)
T 2w8n_A 258 ELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLIN 337 (487)
T ss_dssp EECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTTSTTCCBCCCSS
T ss_pred ecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCcccccCcccCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCc-cccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHh
Q 012790 238 LEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ-YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAN 316 (456)
Q Consensus 238 ~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~-~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n 316 (456)
++++++++++|++++++|+++++||.. ...|+ |++|||+.+++++|++++||+||||++|++|+|+||||+++|
T Consensus 338 ~~~~~rv~~~i~~a~~~Ga~~~~gg~~-----~~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN 412 (487)
T 2w8n_A 338 EKAVEKVEKQVNDAVSKGATVVTGGKR-----HQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIAN 412 (487)
T ss_dssp HHHHHHHHHHHHHHHTTTCEEEECCSB-----CTTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHCCCEEEeCCcc-----CCCCCceECCEEEecCCCcchhhhcccccceEEEEEeCCHHHHHHHHh
Confidence 999999999999999999999999973 23588 999999999999999999999999999999999999999999
Q ss_pred cCCCCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEc
Q 012790 317 DSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 317 ~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~ 391 (456)
+++|||++||||+|.+.++++++++++|+|+||++..+. +.+||||+|.||+|+++|++||++||+.|+|+.+
T Consensus 413 ~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~--~~~PfGG~~~SG~G~~~G~~~l~~f~~~k~v~~~ 485 (487)
T 2w8n_A 413 AADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISS--VECPFGGVKQSGLGREGSKYGIDEYLELKYVCYG 485 (487)
T ss_dssp CTTCCSEEEEECCCHHHHHHHHHHSCSSEEEESCSCCCC--TTSCBCCSGGGEESCBSTTTGGGGGEEEEEEEEC
T ss_pred CCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEcCCCCCC--CCCCCCCCCCCCcCCCchHHHHHHhcCccEEEEe
Confidence 999999999999999999999999999999999976543 4599999999999999999999999999999875
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-86 Score=703.19 Aligned_cols=375 Identities=25% Similarity=0.403 Sum_probs=346.4
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++++++|.++...... ..+...+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 131 a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKp 208 (516)
T 1uzb_A 131 ASADVAEAIDFIEYYARAALRYRYPAVEVVP--YPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKP 208 (516)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGCSSCCCCCC--CTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcccccC--CCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCeEEEeC
Confidence 4579999999999999999998865421111 12346689999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhh------ccCCc
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNAS------KTLTP 155 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa------~~~~p 155 (456)
|+.+|+++.++++++. ++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+++|+.|+++|+ +++||
T Consensus 209 s~~tp~ta~~l~~l~~----eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~~~~ 284 (516)
T 1uzb_A 209 AEDAVVVGAKVFEIFH----EAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKR 284 (516)
T ss_dssp CGGGHHHHHHHHHHHH----HHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHTSCCTTCCSCCE
T ss_pred CCCCHHHHHHHHHHHH----HhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHHhhhccccccccce
Confidence 9999999999888765 6899999999999954 78999998 7999999999999999999998 88999
Q ss_pred ccccCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccc
Q 012790 156 VTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGAL 235 (456)
Q Consensus 156 v~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl 235 (456)
+++|||||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++++|+| ++++++||+
T Consensus 285 v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p-~~~~~~Gpl 363 (516)
T 1uzb_A 285 AYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPA-EENPDLGPV 363 (516)
T ss_dssp EEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCG-GGCCSBCCC
T ss_pred eEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccCCCC-ccccccCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred cCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHH
Q 012790 236 CLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLA 315 (456)
Q Consensus 236 i~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~ 315 (456)
++++++++++++|++++++| ++++||... +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++
T Consensus 364 i~~~~~~~v~~~i~~a~~~G-~v~~gg~~~----~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~a 438 (516)
T 1uzb_A 364 VSAEQERKVLSYIEIGKNEG-QLVLGGKRL----EGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVA 438 (516)
T ss_dssp SCHHHHHHHHHHHHHHTTTS-EEEECCSBC----SSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHCC-CEEECCccC----CCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeCCHHHHHHHH
Confidence 99999999999999999888 899999731 2368999999999999999999999999999999999999999999
Q ss_pred hcCCCCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCC-cchHHHHhccceeeEEEEc
Q 012790 316 NDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGR-FAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 316 n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~-~~g~~gl~~ft~~k~v~~~ 391 (456)
|+++|||++||||+|.++++++++++++|.|+||+...+...+.+||||+|.||+|+ .+|.+++++||+.|+|+.+
T Consensus 439 N~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~k~v~~~ 515 (516)
T 1uzb_A 439 NDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAER 515 (516)
T ss_dssp HCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEEEEEEEE
T ss_pred hcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCCccchHHHHHHcCCeeEEEec
Confidence 999999999999999999999999999999999997655555679999999999995 6889999999999999763
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-87 Score=696.70 Aligned_cols=367 Identities=29% Similarity=0.447 Sum_probs=341.9
Q ss_pred HHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecCC
Q 012790 7 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 86 (456)
Q Consensus 7 ~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~ 86 (456)
.|+..+++.++|+++++++|.+++..+.+....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+
T Consensus 88 ~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~ 167 (457)
T 3lns_A 88 AEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSE 167 (457)
T ss_dssp HTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCT
T ss_pred HHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCC
Confidence 69999999999999999999887654443322346789999999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh-ccCEEEecCCHHHHHHHHHHhhccCCcccccCCCcce
Q 012790 87 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 165 (456)
Q Consensus 87 ~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~-~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgGk~p 165 (456)
.+|+++.++++++.+ + +|+|++|+|+|+.+.+++|++ ++|+|+||||+++|+.|+++|++++||+++|||||||
T Consensus 168 ~tp~t~~~l~~l~~~----a-lP~gvv~vv~g~~~~~~~L~~~~vd~V~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~p 242 (457)
T 3lns_A 168 TTPETSAVIEKIIAE----A-FAPEYVAVIQGGRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCP 242 (457)
T ss_dssp TCHHHHHHHHHHHHH----H-CCTTTEEECCCCHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCEE
T ss_pred CChHHHHHHHHHHHH----h-CCHhhEEEecCCHHHHHHHhcCCCCEEEEECCHHHHHHHHHHHhhccCceEEECCCCCC
Confidence 999999999998875 3 999999999997788999999 9999999999999999999999999999999999999
Q ss_pred EEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHHHHH
Q 012790 166 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQ 245 (456)
Q Consensus 166 ~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~ 245 (456)
+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++++ |.++ ++||+++++++++++
T Consensus 243 ~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~~rv~ 317 (457)
T 3lns_A 243 LIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTERQVQRLV 317 (457)
T ss_dssp EEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSHHHHHHHH
T ss_pred CeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999987 5555 999999999999999
Q ss_pred HHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhc-CCCCcee
Q 012790 246 NLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAND-SRYGLGC 324 (456)
Q Consensus 246 ~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~-~~~gL~~ 324 (456)
++|+++ ++++++||.. +..|+|++|||+++++++|++++||+||||++|++|+|+||||+++|+ ++|||++
T Consensus 318 ~~i~~a---~~~~~~gg~~-----~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a 389 (457)
T 3lns_A 318 SLLEAT---QGQVLVGSQA-----DVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAV 389 (457)
T ss_dssp HHHHHC---CSEEEECCCE-----EGGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEE
T ss_pred HHHHhc---CCeEEeCCcc-----CCCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEE
Confidence 999985 3699999973 246899999999999999999999999999999999999999999999 9999999
Q ss_pred EEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEc
Q 012790 325 AVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 325 ~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~ 391 (456)
||||+|.++++++++++++|+|+||++..+...+.+||||+|+||+|+++|++||++||+.|+|++.
T Consensus 390 ~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~ 456 (457)
T 3lns_A 390 YVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRIV 456 (457)
T ss_dssp EEECSCHHHHHHHHHTSCCSEEEESCCSGGGGCTTSCBCCCGGGEECCBSHHHHHHHTEEEEEEEEC
T ss_pred EEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCcCCcCcCCCCCCchHHHHHHhhCeeEEEeC
Confidence 9999999999999999999999999986555566799999999999999999999999999999764
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-86 Score=695.06 Aligned_cols=368 Identities=32% Similarity=0.488 Sum_probs=342.8
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCccccc----ccc-eEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCe
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIH----KKA-KVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNG 79 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~ 79 (456)
+..|+..+++.++|+++++++|.... .+.+ ..+ ... +++++|+|||++|+|||||+.+.++++++||++||+
T Consensus 97 a~~ev~~~~~~~~~~a~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~ 173 (475)
T 1euh_A 97 AVSEVVRTAEIINYAAEEGLRMEGEV-LEGG--SFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNV 173 (475)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCEEE-EEGG--GTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCc-ccCC--CCCccccceeeEEEEeccceEEEECCCCchHHHHHHHHHHHHHcCCE
Confidence 45799999999999999998886542 1211 112 345 899999999999999999999999999999999999
Q ss_pred EEEecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcc
Q 012790 80 IVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPV 156 (456)
Q Consensus 80 VvlKps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv 156 (456)
||+|||+.+|+++.++++++. ++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+++|+.|+++++ +||+
T Consensus 174 vVlKps~~tp~t~~~l~~ll~----~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa--~~~v 247 (475)
T 1euh_A 174 IAFKPPTQGSISGLLLAEAFA----EAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPI 247 (475)
T ss_dssp EEEECCSTTHHHHHHHHHHHH----HHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTT--TSCE
T ss_pred EEEeCCCcChHHHHHHHHHHH----HhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHHHHhcC--CCcE
Confidence 999999999999999988865 6899999999999975 67899987 7999999999999999999988 9999
Q ss_pred cccCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCcccccc
Q 012790 157 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALC 236 (456)
Q Consensus 157 ~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli 236 (456)
++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+ ++++||++
T Consensus 248 ~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gpli 326 (475)
T 1euh_A 248 MLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPED-DADITPLI 326 (475)
T ss_dssp EEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCGGG-TCSBCCCS
T ss_pred EEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCCccc-cCccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred CHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHh
Q 012790 237 LLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAN 316 (456)
Q Consensus 237 ~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n 316 (456)
++++++++++++++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|
T Consensus 327 ~~~~~~~v~~~i~~a~~~Ga~~~~gG~~-------~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eai~~an 399 (475)
T 1euh_A 327 DTKSADYVEGLINDANDKGATALTEIKR-------EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISN 399 (475)
T ss_dssp CHHHHHHHHHHHHHHHHTTCEECSCCCE-------ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEeCCcc-------CCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCHHHHHHHHh
Confidence 9999999999999999999999999972 589999999999999999999999999999999999999999999
Q ss_pred cCCCCceeEEecCCHHHHHHHHHhcccCCeeecC-CcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEc
Q 012790 317 DSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIND-FASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 317 ~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~-~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~ 391 (456)
+++|||++||||+|.++++++++++++|.|+||+ +..+ .+.+||||+|+||+|+++|++||++||+.|+|+.+
T Consensus 400 ~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~--~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k~v~~~ 473 (475)
T 1euh_A 400 KSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRG--TDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFD 473 (475)
T ss_dssp HSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCC--STTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEE
T ss_pred CCCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCCCCCC--CCCCCcCCCCCCCcCCCccHHHHHHhCCeeEEEEe
Confidence 9999999999999999999999999999999999 5443 35699999999999999999999999999999764
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-86 Score=696.76 Aligned_cols=374 Identities=29% Similarity=0.439 Sum_probs=324.6
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++.+++ +.++..+.. ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 101 a~~ev~~~~~~~~~~a~~~~~-~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKp 178 (485)
T 4dng_A 101 STIELEQTIAILDEAMTYTGE-LGGVKEVPS-DIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKP 178 (485)
T ss_dssp HHHHHHHHHHHHHHHHHHGGG-CSCEECCCC-SSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hCCeecccc-CCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEEC
Confidence 346999999999999999875 333332211 112356789999999999999999999999999999999999999999
Q ss_pred CCCChhHH-HHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccC
Q 012790 85 SENASWSG-CFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 160 (456)
Q Consensus 85 s~~~p~~~-~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lEl 160 (456)
|+.+|+++ .++.+++ .++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+++|+.|++.++++++|+++||
T Consensus 179 s~~tp~~~~~~l~~~l----~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lEl 254 (485)
T 4dng_A 179 DIQTAISGGTIIAKAF----EHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGRAFKRMALEL 254 (485)
T ss_dssp CGGGHHHHTHHHHHHH----HHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCcChHHHHHHHHHHH----HHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHHHHhhhccchhhhc
Confidence 99999999 8877765 57999999999999987 58899998 89999999999999999999999999999999
Q ss_pred CCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHH
Q 012790 161 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 240 (456)
Q Consensus 161 gGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~ 240 (456)
|||||+||++|||++.|++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++++|+|.++++++||++++.+
T Consensus 255 GGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~ 334 (485)
T 4dng_A 255 GGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQ 334 (485)
T ss_dssp CCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSSHHH
T ss_pred CCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCCCcCCCccCCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCC
Q 012790 241 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRY 320 (456)
Q Consensus 241 ~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~ 320 (456)
++++.+++++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|
T Consensus 335 ~~~v~~~i~~a~~~Ga~v~~gg~~-------~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~an~~~~ 407 (485)
T 4dng_A 335 IEKALEIIEQAKTDGIELAVEGKR-------VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEY 407 (485)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCCE-------ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCCC-------CCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHHHHHHHHhCCCC
Confidence 999999999999999999999972 6899999999999999999999999999999999999999999999999
Q ss_pred CceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEcc
Q 012790 321 GLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 321 gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~ 392 (456)
||++||||+|.++++++++++++|.|+||++..+ ..+.+||||+|.||+|++||++||++||+.|+|+.+.
T Consensus 408 gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~-~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 478 (485)
T 4dng_A 408 GLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVN-DSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWISIQK 478 (485)
T ss_dssp CSEEEEECSCHHHHHHHHTTSCSSEEEESCC-----------------------CHHHHHHHEEEEEEEEEC
T ss_pred CceEEEECCCHHHHHHHHHhcCcceEEECCCCCC-CCCCCCcCCcCCCCCCccchHHHHHHhhceEEEEEec
Confidence 9999999999999999999999999999998655 3456999999999999999999999999999998754
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-86 Score=694.64 Aligned_cols=375 Identities=22% Similarity=0.349 Sum_probs=344.6
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|++... +|+..+..+.. ..+...+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 100 a~~ev~~~~~~~~~~a~~~-~~~~g~~~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKp 176 (486)
T 1t90_A 100 ALGEVGRGIENVEFAAGAP-SLMMGDSLASI--ATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKP 176 (486)
T ss_dssp HHHHHHHHHHHHHHHTTHH-HHHCEEEEEEE--ETTEEEEEEEEECSEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHH-HHhcCcccccC--CCCceeEEEecccCEEEEECCCchhHHHHHHHHHHHHHcCCEEEEEC
Confidence 4579999999999988544 45544432211 12345689999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgG 162 (456)
|+.+|+++.++++++. ++|+|+|++|+|+|+.+.+++|++ ++|+|+||||+++|+.|+++|++++||+++||||
T Consensus 177 s~~tp~t~~~l~~l~~----~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa~~~~pv~lElGG 252 (486)
T 1t90_A 177 SERTPLLTEKLVELFE----KAGLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENLKRVQSLTGA 252 (486)
T ss_dssp CSSSCHHHHHHHHHHH----HTTCCTTSEEECCCSHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred CCCChHHHHHHHHHHH----HhCCCCCEEEEEECCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHhccCCcEEeccCC
Confidence 9999999999888865 689999999999997788999998 7999999999999999999999999999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCe-EEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAER-FYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 163 k~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~-v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
|||+||++|||++.|++.+++++|.|+||.|++++| ||||++ +|+|+++|+++++++++|+|.++++++||+++++++
T Consensus 253 k~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~ 331 (486)
T 1t90_A 253 KNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNK 331 (486)
T ss_dssp CEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHH
T ss_pred CCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCCccCCccCCCCCHHHH
Confidence 999999999999999999999999999999999999 999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCC
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 321 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~g 321 (456)
+++.+++++++++|+++++||... .+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 332 ~~v~~~i~~a~~~Ga~~~~gg~~~---~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~eai~~aN~~~~g 408 (486)
T 1t90_A 332 KRTLSYIEKGLEEGARLVCDGREN---VSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFA 408 (486)
T ss_dssp HHHHHHHHHHHHHTCEEEECSSSS---CCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHHSSEE
T ss_pred HHHHHHHHHHHhCCCEEEeCCccC---CCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHHHHHHHHhCCCCC
Confidence 999999999999999999999742 12368999999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCC--CcchHHHHhccceeeEEEEc
Q 012790 322 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG--RFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 322 L~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G--~~~g~~gl~~ft~~k~v~~~ 391 (456)
|++||||+|.++++++++++++|.|+||+.. +...+.+||||+|+||+| ++||++|+++||+.|+|+.+
T Consensus 409 L~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~-~~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~k~v~~~ 479 (486)
T 1t90_A 409 NGACLFTSNSNAIRYFRENIDAGMLGINLGV-PAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTAR 479 (486)
T ss_dssp SEEEEECCBHHHHHHHHHHCCCSEEEESCSC-CCCCTTSCCCCEETTEESSSCSSHHHHHHHTEEEEEEEEE
T ss_pred eEEEEEcCCHHHHHHHHHhCCcCeEEECCCC-CCCCCCCCcCCCCcCCCCCCccchHHHHHHhhceEEEEEe
Confidence 9999999999999999999999999999853 333356999999999999 89999999999999999875
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-86 Score=694.93 Aligned_cols=368 Identities=29% Similarity=0.488 Sum_probs=322.5
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecC
Q 012790 6 LGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 85 (456)
Q Consensus 6 ~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps 85 (456)
..|+..+++.++|+++.+++|..... ....+++++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus 104 ~~ev~~~~~~~~~~a~~~~~~~~~~~--------~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps 175 (478)
T 3ty7_A 104 RVHYQMGLNHFVAARDALDNYEFEER--------RGDDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPS 175 (478)
T ss_dssp HTHHHHHHHHHHHHHHHHHHCCSEEE--------ETTEEEEEEECCCEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcccC--------CccceEEecCceEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECC
Confidence 56999999999999999988765321 2457899999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCC
Q 012790 86 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162 (456)
Q Consensus 86 ~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgG 162 (456)
+.+|+++.++++++. ++|+|+|++|+|+|++ +.++.|+. ++|+|+||||+++|+.|+++++++++|+++||||
T Consensus 176 ~~tp~t~~~l~~~~~----~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~aa~~~~~v~lElGG 251 (478)
T 3ty7_A 176 EETPFAAVILAEIFD----KVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAAKDFKKVSLELGG 251 (478)
T ss_dssp TTSCHHHHHHHHHHH----HHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CSTTTTTCEEECCCCC
T ss_pred CcchHHHHHHHHHHH----HhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHhcCCceEEecCC
Confidence 999999999888865 6899999999999965 78999987 8999999999999999999999999999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHH
Q 012790 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 242 (456)
Q Consensus 163 k~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~ 242 (456)
|||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++++++
T Consensus 252 k~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~ 331 (478)
T 3ty7_A 252 KSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFD 331 (478)
T ss_dssp CCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHH
T ss_pred CCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCc
Q 012790 243 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 322 (456)
Q Consensus 243 ~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL 322 (456)
++++++++++++|+++++||.... .....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||
T Consensus 332 ~v~~~i~~a~~~Ga~~~~gg~~~~-~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL 410 (478)
T 3ty7_A 332 QVQNYINKGIEEGAELFYGGPGKP-EGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGL 410 (478)
T ss_dssp HHHHHHHHHHHHTCEEEECCSSCC-TTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCS
T ss_pred HHHHHHHHHHHCCCEEEecCccCc-cccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCHHHHHHHHhCCCCCc
Confidence 999999999999999999995221 1124689999999999999999999999999999999999999999999999999
Q ss_pred eeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEE
Q 012790 323 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389 (456)
Q Consensus 323 ~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~ 389 (456)
++||||+|.+.++++++++++|+|+||+ .. ..+.+||||+|+||+|+++|++||++||+.|+|+
T Consensus 411 ~a~v~t~d~~~a~~~~~~l~~G~v~vN~-~~--~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~ 474 (478)
T 3ty7_A 411 AGYVIGKDKETLHKVARSIEAGTVEINE-AG--RKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSIA 474 (478)
T ss_dssp EEEEECSCHHHHHHHHHHSCSSEEEETT-CC------------------------CCGGGEEEEEEE
T ss_pred eEEEECCCHHHHHHHHHhCCcCeEEECC-CC--CCCCCCcCCcCcCcCCccchHHHHHHhcCeEEEE
Confidence 9999999999999999999999999999 22 2356899999999999999999999999999987
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-84 Score=692.88 Aligned_cols=386 Identities=22% Similarity=0.297 Sum_probs=350.4
Q ss_pred HHH-HHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 6 LGE-IMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 6 ~~E-i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
..| +..+++.++|+++.++++..++....+ .....++++.|+|||++|+|||||+.+..+++++|| +||+||+||
T Consensus 159 ~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~---~~~~~~~~r~p~GVV~~I~PwNfP~~~~~~~~apAL-aGNtVVlKP 234 (563)
T 4e3x_A 159 EIDAAAELIDFFRFNAKFAVELEGEQPISVP---PSTNHTVYRGLEGFVAAISPFNFTAIGGNLAGAPAL-MGNVVLWKP 234 (563)
T ss_dssp HHHTTHHHHHHHHHHHHHHHHHTTCCCCCCT---TEEEEEECCBCSSEEEEECCSSCHHHHHHHHHHHHH-TTCCEEEEC
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhCCCccCCC---CCcceEEEecCceEEEEECCchHHHHHHHHHHHHhh-cCCEEEEEC
Confidence 345 889999999999999998765432221 123345667778999999999999999999999999 599999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCc------
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTP------ 155 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~p------ 155 (456)
|+.+|+++.++++++. +||+|+|++|+|+|++ +.++.|++ ++|+|+||||+++|+.|+++++++++|
T Consensus 235 s~~tp~sa~~l~~ll~----eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~~aa~~lk~~~~~pr 310 (563)
T 4e3x_A 235 SDTAMLASYAVYRILR----EAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPR 310 (563)
T ss_dssp CGGGHHHHHHHHHHHH----HTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHHHHHHTTTTCSSCCE
T ss_pred CCCChHHHHHHHHHHH----HhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHHhhCCccccCCc
Confidence 9999999998888764 7899999999999986 67899987 999999999999999999999999985
Q ss_pred ccccCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCC-CCCCCcccc
Q 012790 156 VTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP-LAGKYDMGA 234 (456)
Q Consensus 156 v~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~~gp 234 (456)
+++|||||||+||++|||++.|++.+++++|.|+||.|+|++|||||+++||+|+++|+++++++++|+| .++++++||
T Consensus 311 v~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~l~vGdp~~d~~~~~Gp 390 (563)
T 4e3x_A 311 LAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSA 390 (563)
T ss_dssp EEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCTTCSBCC
T ss_pred eeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHHHhccCCCcccCcCCccCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred ccCHHHHHHHHHHHHHHHh-cCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCC--HHHH
Q 012790 235 LCLLEHSEKLQNLVNDALD-KGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNT--DEEV 311 (456)
Q Consensus 235 li~~~~~~~v~~~i~~a~~-~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~--~~ea 311 (456)
++++++++++.++|+++++ +|+++++||... +..|+|++|||+.+++++|++++||+||||++|++|+| +|||
T Consensus 391 li~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~----~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~~~deA 466 (563)
T 4e3x_A 391 VIDAKAFARIKKWLEHARSSPSLSILAGGQCN----ESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRET 466 (563)
T ss_dssp CSCHHHHHHHHHHHHHHHHCTTEEEEECCCEE----CSSSCEECCEEEEESCTTCGGGTSCCCSSEEEEEEECGGGHHHH
T ss_pred CcCHHHHHHHHHHHHHHhhcCCCEEEeCCccC----CCCCcEecCEEEecCCCCChhhcCCCcCeEEEEEEECCCCHHHH
Confidence 9999999999999999996 899999999742 34699999999999999999999999999999999996 7999
Q ss_pred HHHH-hcCCCCceeEEecCCHHHHHHHHHhcc--cCCeeecCCcccccCcCCCccCCCCCCCC-CcchHHHHhccceeeE
Q 012790 312 VKLA-NDSRYGLGCAVFSGSQHRAREIAAQIQ--CGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKS 387 (456)
Q Consensus 312 i~~~-n~~~~gL~~~vft~d~~~~~~~~~~l~--~G~v~iN~~~~~~~~~~~PfGG~~~SG~G-~~~g~~gl~~ft~~k~ 387 (456)
|+++ |+++|||++||||+|.+.+++++++++ +|+|+||+..+....+.+||||+|.||+| +.+|+++|++|++.|+
T Consensus 467 i~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~SG~g~~~~G~~~l~~~~~~k~ 546 (563)
T 4e3x_A 467 LKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPGGPHYILRWTSPQV 546 (563)
T ss_dssp HHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEETTBCCCCTTSTTGGGGGBCCEE
T ss_pred HHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccccCCCCccCCHHHHHHhCceEE
Confidence 9999 799999999999999999999999976 99999999866555567999999999998 8999999999999999
Q ss_pred EEEcccccccccCCCCCCCCCCC
Q 012790 388 VVEDRWWPYIKTKIPKPIQYPVA 410 (456)
Q Consensus 388 v~~~~~~~~~~~~~~~~~~~p~~ 410 (456)
|.+. | ..+.++|||+.
T Consensus 547 v~~~-~------~~~~~~~yp~~ 562 (563)
T 4e3x_A 547 IKET-H------KPLGDWRYSYM 562 (563)
T ss_dssp EEEE-C------SCCCCSSCTTC
T ss_pred EEEe-C------cCCCcccCCCC
Confidence 9876 3 23567899974
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-82 Score=668.74 Aligned_cols=368 Identities=22% Similarity=0.344 Sum_probs=339.8
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++.++++.+..... ..+...+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 99 a~~ev~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKp 174 (490)
T 3ju8_A 99 SATEVTSMVNKVAISVQAFRERTGEKSGP----LADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKP 174 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCCEEEE----ETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcccc----CCCCeeeEEECCCCEEEEECCCcchHHHHHHHHHHHHHcCCeEEEEC
Confidence 45799999999999999988876543211 12345678899999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcc-cccCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPV-TLELG 161 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv-~lElg 161 (456)
|+.+|+++.++++++. ++|+|+|++|+|+|+.+.+++|++ ++|+|+||||+++|+.|+++|+++++|+ +||||
T Consensus 175 s~~tp~t~~~l~~l~~----~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~~lElG 250 (490)
T 3ju8_A 175 SELTPKVAELTLKAWI----QAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKILALEMG 250 (490)
T ss_dssp CTTCHHHHHHHHHHHH----HTTCCTTTEEECCCSHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTTCTTSEEEEECC
T ss_pred CCCCcHHHHHHHHHHH----HhCcCcCeEEEEeCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhccCCCcEEeecC
Confidence 9999999998888764 689999999999998788999998 7999999999999999999999999998 89999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhh-HHHHHHHHHHHHhccccCC-CCCCCCccccccCHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDI-YALFVSQVAKIVKSVSAGP-PLAGKYDMGALCLLE 239 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i-~d~f~~~l~~~~~~~~~g~-~~~~~~~~gpli~~~ 239 (456)
||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++ +|+|+++|+++++++++|+ |.++++++||+++++
T Consensus 251 Gk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~~Gpli~~~ 330 (490)
T 3ju8_A 251 GNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPAPFMGAVISLS 330 (490)
T ss_dssp CCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSCCSBCCCSCHH
T ss_pred CCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCCcCccccccCHH
Confidence 99999999999999999999999999999999999999999996 9999999999999999999 999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCC
Q 012790 240 HSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSR 319 (456)
Q Consensus 240 ~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~ 319 (456)
+++++.+++++++++|+++++||... +..|+|++|||+. ++++|++++||+||||++|++|+|+||||+++|+++
T Consensus 331 ~~~~v~~~i~~a~~~Ga~~~~gg~~~----~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~ 405 (490)
T 3ju8_A 331 AAEHLLKAQEHLIGKGAQPLLAMTQP----IDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQ 405 (490)
T ss_dssp HHHHHHHHHHHHHHTTCEEEECCCCC----STTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEESSHHHHHHHHHCSS
T ss_pred HHHHHHHHHHHHHHCCCEEEECCCcc----CCCCCEEccEEEE-eCCCCccccccccccEEEEEEeCCHHHHHHHHhcCC
Confidence 99999999999999999999999742 3578999999999 999999999999999999999999999999999999
Q ss_pred CCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEcc
Q 012790 320 YGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 320 ~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~ 392 (456)
|||++||||+|.++++++++++++|+|+||++.... .+.+||||+|.||++ ++++|++.|+|+...
T Consensus 406 ~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~-~~~~PfGG~~~SG~~------~~~~~~~~k~v~~~~ 471 (490)
T 3ju8_A 406 YGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGA-ASSAPFGGIGASGNH------RPSAYYAADYCAYPV 471 (490)
T ss_dssp CCSEEEEECSCHHHHHHHHHHCCSSEEEESSCSSCC-CTTSEECCCGGGBSS------CCEETTHHHHHEEEE
T ss_pred CCceEEEEcCCHHHHHHHHHhcCcceEEECCCcCCC-CCCCCcCCccccchh------HHHhhheeEEEEEec
Confidence 999999999999999999999999999999976533 356999999999975 589999999987653
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-81 Score=704.15 Aligned_cols=377 Identities=23% Similarity=0.399 Sum_probs=349.9
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEe
Q 012790 4 ASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIK 83 (456)
Q Consensus 4 ~~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlK 83 (456)
.+..|+..+++.++|+++.++++.+++.... ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|
T Consensus 624 ea~~Ev~~aid~lr~~a~~~~~~~~~~~~~~---~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~~~a~ALaaGNtVVlK 700 (1026)
T 4f9i_A 624 QAYADVTEAIDFLEYYAREMIRLGQPQRVGH---APGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFK 700 (1026)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCEEECC---CTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEE
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCccccC---CCCccceeEeecCceEEEeCCCccHHHHHHHHHHHHHHcCCEEEEE
Confidence 3457999999999999999999876544321 1245678999999999999999999999999999999999999999
Q ss_pred cCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhh------ccCC
Q 012790 84 VSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNAS------KTLT 154 (456)
Q Consensus 84 ps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa------~~~~ 154 (456)
||+.+|+++.++++++. +||+|+|++|+|+|++ +.+++|++ +||+|+||||+++|+.|++.++ ++++
T Consensus 701 Pse~tplsa~~l~ell~----eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~aa~~~~~~~~lk 776 (1026)
T 4f9i_A 701 PSGITSIIGWHLVELFR----EAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVK 776 (1026)
T ss_dssp CCGGGHHHHHHHHHHHH----HTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCC
T ss_pred cCccchHHHHHHHHHHH----HhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHhhcccccccCcc
Confidence 99999999998888764 7899999999999976 68999998 8999999999999999999998 5789
Q ss_pred cccccCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCcccc
Q 012790 155 PVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGA 234 (456)
Q Consensus 155 pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gp 234 (456)
|+++|||||||+||++|||++.|++.+++|+|.|+||.|+|++|+|||++++|+|+++|+++++++++|+|.++++++||
T Consensus 777 pv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~vG~p~d~~t~~Gp 856 (1026)
T 4f9i_A 777 KIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGA 856 (1026)
T ss_dssp EEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCC
T ss_pred ceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhcccCCcccccCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHH
Q 012790 235 LCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKL 314 (456)
Q Consensus 235 li~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~ 314 (456)
+|++.+++++.++|++++++| ++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus 857 vi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~----~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~deAI~~ 931 (1026)
T 4f9i_A 857 VADDKAMKSIKEYAEIGKREG-HVLYESPVP----AGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEW 931 (1026)
T ss_dssp CSSHHHHHHHHHHHHHHHHHS-EEEEECCCC----SSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHhCC-eEEecCCcC----CCCCceecceeeecCCCCccccCceecCcEEEEEEeCCHHHHHHH
Confidence 999999999999999999998 999999731 234999999999999999999999999999999999999999999
Q ss_pred HhcCCCCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCC-cchHHHHhccceeeEEEEcc
Q 012790 315 ANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGR-FAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 315 ~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~-~~g~~gl~~ft~~k~v~~~~ 392 (456)
+|+++|||++||||+|.+.++++++++++|+|+||+.+++...+.+||||+|.||+|+ .+|+++|++|++.|+|..+.
T Consensus 932 aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~~l~~f~~~k~v~~~~ 1010 (1026)
T 4f9i_A 932 ANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFMDPRVVTENT 1010 (1026)
T ss_dssp HTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSCCBTSTTTGGGGEEEEEEEEEC
T ss_pred HHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCCCcCCHHHHHHhceEEEEEEec
Confidence 9999999999999999999999999999999999998766555679999999999995 68899999999999998865
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-81 Score=667.94 Aligned_cols=382 Identities=17% Similarity=0.246 Sum_probs=333.9
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhC------CcccCCCcccccccceEEEecc-eEEEEEcCCccchHhhHHHHHHHHhcC
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLK------PEYRSSGRSMIHKKAKVEFHPL-GVVGAIVSWNYPFHNIFNPMLAAVFSG 77 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~P~-GVv~vi~p~N~P~~~~~~~~~~ALaaG 77 (456)
+..|+..+++.++|++..+++... ++..+... ......++.++|+ |||++|+|||||+.++++++++||++|
T Consensus 101 a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~P~~GVv~~I~PwN~P~~~~~~~~a~ALaaG 179 (534)
T 2y53_A 101 SAVDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSK-DRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSG 179 (534)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECST-TSSEEEEEEEEECSSCEEEECCTTCTTHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccccccCCccccCCC-CCcccceEEEecCCCEEEEECCCchHHHHHHHHHHHHHHcC
Confidence 346999999999999988765421 11111110 0011357889997 999999999999999999999999999
Q ss_pred CeEEEecCCCChhHHHHHHHHHHHHHHHcC-CCCCcEEEEeCChH-hHHHHHhccCEEEecCCHHHHHHHHHHhh--ccC
Q 012790 78 NGIVIKVSENASWSGCFYFRIIQAALAAVG-APENLVDVITGFAE-TGEALVSSVDKIIFVGSPGVGRMIMRNAS--KTL 153 (456)
Q Consensus 78 N~VvlKps~~~p~~~~~l~~l~~~~l~~aG-lp~g~v~vv~g~~~-~~~~L~~~vd~i~fTGS~~~g~~v~~~aa--~~~ 153 (456)
|+||+|||+.+|+++..+++++. ++| +|+|++|+|+|+++ .++.| .++|+|+||||+++|+.|++.++ +++
T Consensus 180 N~VVlKPs~~tp~~~~~l~~l~~----~aG~lP~gvv~vv~g~~~~l~~~l-~~vd~V~FTGS~~~G~~i~~~aa~a~~~ 254 (534)
T 2y53_A 180 VPVIVKPATATAWLTQRMVADVV----DAGILPPGALSIICGSSAGLLDQI-RSFDVVSFTGSADTAATLRAHPAFVQRG 254 (534)
T ss_dssp CCEEEECCGGGHHHHHHHHHHHH----HHTCSCTTSEEECCSCCTTSGGGC-CTTCEEEEESCHHHHHHHHTSHHHHTTC
T ss_pred CEEEEECCCcchHHHHHHHHHHH----HhCCCCCCeEEEEeCChHHHHhcc-cccCEEEEECCHHHHHHHHHhhhhhcCC
Confidence 99999999999999999888864 689 79999999999653 22222 17999999999999999998875 899
Q ss_pred CcccccCCCcceEEEcCCC-----CHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCC
Q 012790 154 TPVTLELGGKDAFIVCDDV-----DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAG 228 (456)
Q Consensus 154 ~pv~lElgGk~p~iV~~da-----Dl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~ 228 (456)
||+++|||||||+||++|| |++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++
T Consensus 255 k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~ 334 (534)
T 2y53_A 255 ARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRND 334 (534)
T ss_dssp CEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBBCTTST
T ss_pred CcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHHHHHHHHHhccCCCCCcC
Confidence 9999999999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCC--CCCCCCccccceeeecCCCC--CccchhccccCceeEee
Q 012790 229 KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHL--SEGAVDQYFPPTVIVNVNHT--MKLMQEEAFGPIMPIMK 304 (456)
Q Consensus 229 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~--~~~~~g~~~~Ptvl~~v~~~--~~i~~eE~FGPvl~v~~ 304 (456)
++++||+++++|+++++++|+++ ++|+++++||..... .....|+|++|||+.+++++ |++++||+||||++|++
T Consensus 335 ~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i~~eEiFGPVl~v~~ 413 (534)
T 2y53_A 335 AVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAP 413 (534)
T ss_dssp TCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCSSTTTCCCSSSEEEEEE
T ss_pred CCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEecCccccCHHHhCCCcCCEEEEEE
Confidence 99999999999999999999999 689999999973210 01135899999999999987 69999999999999999
Q ss_pred eC---CH-----HHHHHHHhcCCCCceeEEecCCHHHHHHHHHhc--ccCCeeecCCccc-------ccCcCCCccCCCC
Q 012790 305 FN---TD-----EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI--QCGVAAINDFASN-------YMCQSLPFGGVKD 367 (456)
Q Consensus 305 ~~---~~-----~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l--~~G~v~iN~~~~~-------~~~~~~PfGG~~~ 367 (456)
|+ |+ ||||+++|+++|||++||||+|.++++++++++ ++|+|+||++... ...+.+||||+|+
T Consensus 414 ~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~~~~~~~~~~~~pfGG~k~ 493 (534)
T 2y53_A 414 YRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGNVMPMSLHGGPGR 493 (534)
T ss_dssp ECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTTCCCSSCCCTTSEECCSGG
T ss_pred ECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCcccccccccCCCCCCCCCCCccc
Confidence 99 99 999999999999999999999999999999999 8999999986421 1245699999999
Q ss_pred CCCCCc-chHHHHhccceeeEEEEccc
Q 012790 368 SGFGRF-AGVEGLRACCLVKSVVEDRW 393 (456)
Q Consensus 368 SG~G~~-~g~~gl~~ft~~k~v~~~~~ 393 (456)
||+|++ +|.+|+++|++.|++...+.
T Consensus 494 SG~Gr~~~g~~~l~~~~~~k~v~~~p~ 520 (534)
T 2y53_A 494 AGGGEELGGLRALAFYHRRSAIQAASA 520 (534)
T ss_dssp GCSCCEESGGGGGGGGEEEEEEEEEHH
T ss_pred CCCCCCcchHHHHHHHhhhheeecCHH
Confidence 999999 69999999999999987653
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-80 Score=688.69 Aligned_cols=373 Identities=23% Similarity=0.369 Sum_probs=343.2
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhhCCcc-cCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEE
Q 012790 4 ASLGEIMTTCEKITWLLSEGEKWLKPEY-RSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVI 82 (456)
Q Consensus 4 ~~~~Ei~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~Vvl 82 (456)
++..||..+++.++|+++.++++..... .+.. .+...+++++|+|||++|+|||||+.++++++++||++||+||+
T Consensus 606 ea~~Ev~~ai~~lr~~a~~a~~~~g~~~~~~~~---~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVl 682 (1001)
T 3haz_A 606 DALSELREAADFCRYYAAQGRKLFGSETAMPGP---TGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVA 682 (1001)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSSCEECCCC---TTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCccccccCC---CCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEE
Confidence 3467999999999999999998865321 1211 24567899999999999999999999999999999999999999
Q ss_pred ecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhcc---CCccc
Q 012790 83 KVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKT---LTPVT 157 (456)
Q Consensus 83 Kps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~---~~pv~ 157 (456)
|||+.+|+++..+++++. ++|+|+|++|+|+|+++.++.|++ +||+|+||||+++|+.|++.++++ ++|++
T Consensus 683 KPse~tp~ta~~l~ell~----eAGlP~gvv~vV~G~g~~g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~ 758 (1001)
T 3haz_A 683 KPAEQTPRIAREAVALLH----EAGIPKSALYLVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLI 758 (1001)
T ss_dssp ECCTTCHHHHHHHHHHHH----HHTCCTTTEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEE
T ss_pred ecchhhHHHHHHHHHHHH----HhCcCcCcEEEEecCchHHHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEE
Confidence 999999999999888765 689999999999998755999998 799999999999999999998864 89999
Q ss_pred ccCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccC
Q 012790 158 LELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCL 237 (456)
Q Consensus 158 lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~ 237 (456)
+|||||||+||++|||++.|++.+++|+|.|+||.|+|++|||||++++|+|+++|+++++++++|+|.++++++||+++
T Consensus 759 lElGGknp~IV~~dADld~Aa~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~ 838 (1001)
T 3haz_A 759 AETGGINAMIADATALPEQVADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVID 838 (1001)
T ss_dssp EECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSC
T ss_pred eecCCcceEEEcCCCCHHHHHHHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCC--HHHHHHHH
Q 012790 238 LEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNT--DEEVVKLA 315 (456)
Q Consensus 238 ~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~--~~eai~~~ 315 (456)
+.+++++.++|++++++| ++ +||.. +..|+|++|||+.+ +++.+++||+||||++|++|++ +||||+++
T Consensus 839 ~~~~~rv~~~i~~a~~~g-~v-~gg~~-----~~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~a 909 (1001)
T 3haz_A 839 VEAKQRLDAHIARMKTEA-RL-HFAGP-----APEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRAI 909 (1001)
T ss_dssp HHHHHHHHHHHHHHHHHS-EE-EEECC-----CCSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcC-eE-ecccc-----CCCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHHH
Confidence 999999999999999888 88 88873 34599999999985 6889999999999999999986 89999999
Q ss_pred hcCCCCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCC-CcchHHHHhccceeeEEEEcc
Q 012790 316 NDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 316 n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G-~~~g~~gl~~ft~~k~v~~~~ 392 (456)
|+++|||++||||+|.++++++++++++|+|+||+...+...+.+||||+|.||+| +.+|++||++||+.|+|+.+.
T Consensus 910 N~t~yGLta~V~T~d~~~a~~~a~~l~aG~V~VN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~gl~~ft~~K~v~~~~ 987 (1001)
T 3haz_A 910 ERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQTVTINT 987 (1001)
T ss_dssp HHTCCCSEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCCGGGBCCCCBTSTTSGGGGEEEEEEEEEC
T ss_pred HcCCCCceEEEEcCCHHHHHHHHHhCCeeeEEEeCCCcCCCCCCCCCCCcccCcCCCCCCCHHHHHHhceeeEEEECC
Confidence 99999999999999999999999999999999999876665567899999999999 567899999999999998865
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-80 Score=653.61 Aligned_cols=369 Identities=17% Similarity=0.212 Sum_probs=332.7
Q ss_pred hHHHHHHHHHHHHHHHHhhhh--hhCCccc---CCCcccccccceEEEecceEEEEEcCCccchHhhH--HHHHHHHhcC
Q 012790 5 SLGEIMTTCEKITWLLSEGEK--WLKPEYR---SSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF--NPMLAAVFSG 77 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~--~~~~~ALaaG 77 (456)
+..|+..+++.++|+++.+++ |+.+... +..........+++++|+|||++|+|||||+.+.+ +++++||++|
T Consensus 120 a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~a~ALaaG 199 (528)
T 3v4c_A 120 LNGERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAG 199 (528)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSSTTTTSTTSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECCCcchHHHhhhhhhhHHHHhcC
Confidence 457999999999999999987 6654321 11000112456899999999999999999999865 9999999999
Q ss_pred CeEEEecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccC-
Q 012790 78 NGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTL- 153 (456)
Q Consensus 78 N~VvlKps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~- 153 (456)
|+||+|||+.+|+++.++++++.++|.++|+|+|++|+|+|++ +.+++|++ +||+|+||||+.+|+.|+++|++++
T Consensus 200 N~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V~fTGS~~~G~~i~~~aa~~~~ 279 (528)
T 3v4c_A 200 CPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAARPE 279 (528)
T ss_dssp CCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSS
T ss_pred CEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECChHHHHHHHHHHhhccC
Confidence 9999999999999999999999999999999999999999965 78899998 8999999999999999999999999
Q ss_pred -CcccccCCCcceEEEcCCC---CHHHHHHHHHHHHhhCCCCCcccCCeEEEehh-hHHHHHHHHHHHHhccccCCCCCC
Q 012790 154 -TPVTLELGGKDAFIVCDDV---DVPHVAQIAVRAALQSSGQNCAGAERFYVHRD-IYALFVSQVAKIVKSVSAGPPLAG 228 (456)
Q Consensus 154 -~pv~lElgGk~p~iV~~da---Dl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~~g~~~~~ 228 (456)
+|+++|||||||+||++|| |++.|++.+++++|.|+||.|+|++|||||++ ++|+|+++|++++++++.|
T Consensus 280 ~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~~----- 354 (528)
T 3v4c_A 280 PIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADADRFTTAAVEALAKVAPQ----- 354 (528)
T ss_dssp CCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHTCCCE-----
T ss_pred CCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccHHHHHHHHHHHHHHhcccC-----
Confidence 9999999999999999999 88999999999999999999999999999997 9999999999999998744
Q ss_pred CCccccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCC---CccchhccccCceeEeee
Q 012790 229 KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHT---MKLMQEEAFGPIMPIMKF 305 (456)
Q Consensus 229 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~---~~i~~eE~FGPvl~v~~~ 305 (456)
+.+||++++++.+++.++++ ++|+++++||.. .|+|++|||+.+++++ |++++||+||||++|++|
T Consensus 355 -~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~-------~g~~~~PTvl~~~~~~~~~~~i~~eEiFGPVl~V~~~ 423 (528)
T 3v4c_A 355 -TMLTDGIAKAYRDGQARFAT---RNAVKPLLATES-------SGRDASPNLFETTGAQFLADHALGEEVFGPLGLVVRV 423 (528)
T ss_dssp -ECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC-------CTTEECCEEEEEEHHHHHHCGGGGCCCSSSEEEEEEE
T ss_pred -CCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc-------CCceeccEEEEecCcccccChhhcccccCCeEEEEec
Confidence 57899999988888887764 479999999972 6899999999988887 899999999999999999
Q ss_pred CCHHHHHHHHhcCCCCceeEEecC--CHHHHHHHHHhcc--cCCeeecCCcccc-cCcCCCccC-CCCCCCCCcc--hHH
Q 012790 306 NTDEEVVKLANDSRYGLGCAVFSG--SQHRAREIAAQIQ--CGVAAINDFASNY-MCQSLPFGG-VKDSGFGRFA--GVE 377 (456)
Q Consensus 306 ~~~~eai~~~n~~~~gL~~~vft~--d~~~~~~~~~~l~--~G~v~iN~~~~~~-~~~~~PfGG-~~~SG~G~~~--g~~ 377 (456)
+|+||||+++|+++|||++||||+ |.+++++++++++ +|+|+||++.+.. ..+.+|||| +|.||+|++| |++
T Consensus 424 ~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~~~~~~~~pfGG~~~~Sg~gr~~~~G~~ 503 (528)
T 3v4c_A 424 GSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVHGGPYPASTNFGATSVGTM 503 (528)
T ss_dssp SSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEESSCTTCCCCSTTCCCCCTTTTBSCTTCCSSSGG
T ss_pred CCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCCCccCCCCCCCCCCCCCCCCCCCCCcHH
Confidence 999999999999999999999999 8899999999998 9999999975532 346799999 9999999987 999
Q ss_pred HHhccceeeEEE
Q 012790 378 GLRACCLVKSVV 389 (456)
Q Consensus 378 gl~~ft~~k~v~ 389 (456)
|+++|++.|++.
T Consensus 504 gl~~~~~~k~~q 515 (528)
T 3v4c_A 504 SIRRFLRPVAYQ 515 (528)
T ss_dssp GGGGGEEEEEEE
T ss_pred HHHHhchhHHhh
Confidence 999999999853
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-79 Score=645.87 Aligned_cols=367 Identities=16% Similarity=0.216 Sum_probs=328.5
Q ss_pred hHHHHHHHHHHHHHHHHhhhh--hhCCcccCC-Ccccc-c-ccceEEEecceEEEEEcCCccchHhh--HHHHHHHHhcC
Q 012790 5 SLGEIMTTCEKITWLLSEGEK--WLKPEYRSS-GRSMI-H-KKAKVEFHPLGVVGAIVSWNYPFHNI--FNPMLAAVFSG 77 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~--~~~~~~~~~-~~~~~-~-~~~~~~~~P~GVv~vi~p~N~P~~~~--~~~~~~ALaaG 77 (456)
+..|+..+++.++|+++++++ |+++..... +.... + ...+++++|+|||++|+|||||+.++ .+++++||++|
T Consensus 87 a~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~ALaaG 166 (510)
T 1ez0_A 87 LTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAG 166 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHHHHHHHcC
Confidence 467999999999999999987 765432110 00000 1 13589999999999999999999985 49999999999
Q ss_pred CeEEEecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCC-hHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccC-
Q 012790 78 NGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTL- 153 (456)
Q Consensus 78 N~VvlKps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~-~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~- 153 (456)
|+||+|||+.+|+++.++++++.++|.++|+|+|++|+|+|+ .+.+++|++ .+|+|+||||+++|+.|+++|++++
T Consensus 167 N~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~l~ 246 (510)
T 1ez0_A 167 CPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPE 246 (510)
T ss_dssp CCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSS
T ss_pred CEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHhhccCC
Confidence 999999999999999999999999999999999999999995 578999998 7999999999999999999999986
Q ss_pred -CcccccCCCcceEEEcCCCCHH--HHHHHHHHHHhhCCCCCcccCCeEEEehh-hHHHHHHHHHHHHhccccCCCCCCC
Q 012790 154 -TPVTLELGGKDAFIVCDDVDVP--HVAQIAVRAALQSSGQNCAGAERFYVHRD-IYALFVSQVAKIVKSVSAGPPLAGK 229 (456)
Q Consensus 154 -~pv~lElgGk~p~iV~~daDl~--~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~~g~~~~~~ 229 (456)
||+++|||||||+||++|||++ .|++.+++++|.|+||.|+|++|||||++ ++|+|+++|+++++++++
T Consensus 247 ~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~------- 319 (510)
T 1ez0_A 247 PIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSP------- 319 (510)
T ss_dssp CCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCCC-------
T ss_pred CccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcCC-------
Confidence 9999999999999999999999 99999999999999999999999999998 999999999999999863
Q ss_pred CccccccCHHHHHHHHHHHHHHHh-cCCeEeecCCCCCCCCCCCCccccceeeecCCCC---CccchhccccCceeEeee
Q 012790 230 YDMGALCLLEHSEKLQNLVNDALD-KGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHT---MKLMQEEAFGPIMPIMKF 305 (456)
Q Consensus 230 ~~~gpli~~~~~~~v~~~i~~a~~-~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~---~~i~~eE~FGPvl~v~~~ 305 (456)
||++++.+.+++.++|+++++ +|+++++||. +|+|++|||+.+++++ |++++||+||||++|++|
T Consensus 320 ---gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~--------~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~~~ 388 (510)
T 1ez0_A 320 ---STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA--------ESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVC 388 (510)
T ss_dssp ---BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC--------CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEE
T ss_pred ---CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC--------CCCEecCEEEEecCCccccCHHHcCCccCCeEEEEEe
Confidence 678889999999999999984 7999999986 2899999999988877 999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCceeEEecCCH--HHHHHHHHhc--ccCCeeecCCcccc-cCcCCCccC-CCCCCCCC--cchHH
Q 012790 306 NTDEEVVKLANDSRYGLGCAVFSGSQ--HRAREIAAQI--QCGVAAINDFASNY-MCQSLPFGG-VKDSGFGR--FAGVE 377 (456)
Q Consensus 306 ~~~~eai~~~n~~~~gL~~~vft~d~--~~~~~~~~~l--~~G~v~iN~~~~~~-~~~~~PfGG-~~~SG~G~--~~g~~ 377 (456)
+|+||||+++|+++|||++||||+|. ++++++++++ ++|+|+||++.... ..+.+|||| +|.||+|+ .+|++
T Consensus 389 ~~~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~~~G~~ 468 (510)
T 1ez0_A 389 ENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAE 468 (510)
T ss_dssp SSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCSSSGG
T ss_pred CCHHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCCCCCCccHH
Confidence 99999999999999999999999987 7899999999 79999999875432 234689999 79999985 48999
Q ss_pred HHhccceeeEEE
Q 012790 378 GLRACCLVKSVV 389 (456)
Q Consensus 378 gl~~ft~~k~v~ 389 (456)
||++|++.|++.
T Consensus 469 gl~~~~~~k~~~ 480 (510)
T 1ez0_A 469 AIHRWLRPVAYQ 480 (510)
T ss_dssp GGGGGEEEEEEE
T ss_pred HHHHhheEEEEc
Confidence 999999888764
|
| >1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-74 Score=599.42 Aligned_cols=342 Identities=14% Similarity=0.138 Sum_probs=271.9
Q ss_pred HHHHHH-HHHHHHHHHHhhhhhhCCcccCCCc-c---c-ccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCe
Q 012790 6 LGEIMT-TCEKITWLLSEGEKWLKPEYRSSGR-S---M-IHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNG 79 (456)
Q Consensus 6 ~~Ei~~-~~~~i~~~~~~~~~~~~~~~~~~~~-~---~-~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~ 79 (456)
..|+.. +++.++|+++.+++|.+++...... . . .+...+++++|+|||++|+||| | .++++++++||++||+
T Consensus 77 ~~ev~~~~~~~~~~~a~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~ 154 (468)
T 1vlu_A 77 LKRLDLFKGDKFEVMLQGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNA 154 (468)
T ss_dssp HHHHCTTSTTHHHHHHHHHHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCE
T ss_pred HHHHhhhhHHHHHHHHHHHHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCE
Confidence 467877 8899999999999987543210010 0 0 1335689999999999999999 9 9999999999999999
Q ss_pred EEEecCCCChhHHHHHHHHHHHHHHH----cCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhcc
Q 012790 80 IVIKVSENASWSGCFYFRIIQAALAA----VGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKT 152 (456)
Q Consensus 80 VvlKps~~~p~~~~~l~~l~~~~l~~----aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~ 152 (456)
||+|||+.+|+++.++++++.++|.+ +|+|+|++|+|+ ++ +.++.|++ ++|+|+||||+++|+.|++.+
T Consensus 155 VVlKps~~tp~t~~~l~~l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a--- 230 (468)
T 1vlu_A 155 AILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT--- 230 (468)
T ss_dssp EEEECCGGGHHHHHHHHHHHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---
T ss_pred EEEEcCCccHHHHHHHHHHHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc---
Confidence 99999999999999999999999999 999999999999 65 67888887 799999999999999999887
Q ss_pred CCcccccCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhcccc---CCCCCCC
Q 012790 153 LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA---GPPLAGK 229 (456)
Q Consensus 153 ~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~---g~~~~~~ 229 (456)
+||+++|||||||+||++|||++.|++.+++++|.|+| .|+|++|||||+++ |+|+++|.++++++++ |+|.+
T Consensus 231 ~kpv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~-- 306 (468)
T 1vlu_A 231 KIPVLGHADGICSIYLDEDADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL-- 306 (468)
T ss_dssp CSCBTTBCSCCEEEEECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH--
T ss_pred CCCEEeecCCccceEECCCCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH--
Confidence 69999999999999999999999999999999999999 99999999999999 9999999999999987 77532
Q ss_pred CccccccCHHHHHHHHHH-HHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCH
Q 012790 230 YDMGALCLLEHSEKLQNL-VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD 308 (456)
Q Consensus 230 ~~~gpli~~~~~~~v~~~-i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~ 308 (456)
+++ |++++ ++++||. | ++||++ ++++|++++||+||||++|++|+|+
T Consensus 307 ---------------~~~~i~~a~----~~~~gG~---------g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~ 354 (468)
T 1vlu_A 307 ---------------KTAYFDKLN----ELGKLTE---------A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTST 354 (468)
T ss_dssp ---------------HHHHHHHHH----HHTCCCH---------H--HHTTBC---------------CCCCEEEECCSH
T ss_pred ---------------hcccccccc----eeeccCC---------C--CCCcee--eCCCchhhhcCccCceEEEEEeCCH
Confidence 345 66664 4666664 4 689997 7899999999999999999999999
Q ss_pred HHHHHHHhcCCCCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCcc-----CCCCCCCCCcchHHHHhccc
Q 012790 309 EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFG-----GVKDSGFGRFAGVEGLRACC 383 (456)
Q Consensus 309 ~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfG-----G~~~SG~G~~~g~~gl~~ft 383 (456)
||||+++|+++|||++||||+|.++++++++++++|.|+||++... .+.+||| |+|.||+|++ |++|+++|+
T Consensus 355 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~--~~~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~ 431 (468)
T 1vlu_A 355 ESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWNASTRF--ADGFRYGFGAEVGISTSKIHAR-GPVGLDGLV 431 (468)
T ss_dssp HHHHHHHTTSCSSCEEEEECSCHHHHHHHHHHCCCSEEEESSCGGG--CC-----------------------CCSGGGE
T ss_pred HHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEcCCCCC--CCCCCCCCCCCcceecCCCCCC-cchHHHHhc
Confidence 9999999999999999999999999999999999999999997643 3458999 9999999999 999999999
Q ss_pred eeeEEEEcc
Q 012790 384 LVKSVVEDR 392 (456)
Q Consensus 384 ~~k~v~~~~ 392 (456)
+.|+|+.+.
T Consensus 432 ~~K~v~~~~ 440 (468)
T 1vlu_A 432 SYQYQIRGD 440 (468)
T ss_dssp EEEEEEECS
T ss_pred ceEEEEECC
Confidence 999998764
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-72 Score=590.42 Aligned_cols=351 Identities=17% Similarity=0.207 Sum_probs=311.7
Q ss_pred HHHHHHhhhhhhCCcccCCCcc-cccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecCCCChhHHHH
Q 012790 16 ITWLLSEGEKWLKPEYRSSGRS-MIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 94 (456)
Q Consensus 16 i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~ 94 (456)
.++..+....|+++.+...... ..+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..
T Consensus 74 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~ 153 (464)
T 3k9d_A 74 NVFASKHVYNYIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILE 153 (464)
T ss_dssp HHHHHHHHHHHHTTCCCSEEEEEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH
T ss_pred HHHHHHHHHHhhhcccccceeccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHH
Confidence 3455555555655432111111 124567889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEeCC-hHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCC-CcceEEEcC
Q 012790 95 YFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG-GKDAFIVCD 170 (456)
Q Consensus 95 l~~l~~~~l~~aGlp~g~v~vv~g~-~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg-Gk~p~iV~~ 170 (456)
+++++.+++.++|+|+|++++|+|. .+.+++|++ ++|+|+||||+. +++++++++||+ +|+| ||||+||++
T Consensus 154 l~~ll~~~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~----v~~~a~~~~kpv-lelG~G~~p~iV~~ 228 (464)
T 3k9d_A 154 TVRIISEAAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSA----MVKAAYSSGTPA-IGVGPGNGPAFIER 228 (464)
T ss_dssp HHHHHHHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHH----HHHHHTTSSSCE-EEBCCCCCEEEECT
T ss_pred HHHHHHHHHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChH----HHHHHHhcCCcE-EeeCCCCCeEEECC
Confidence 9999999999999999999999995 588999998 799999999998 466778899999 8998 999999999
Q ss_pred CCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHH-------hccccCCCC-CCCCccccccCHHHHH
Q 012790 171 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV-------KSVSAGPPL-AGKYDMGALCLLEHSE 242 (456)
Q Consensus 171 daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~-------~~~~~g~~~-~~~~~~gpli~~~~~~ 242 (456)
|||++.|++.|++|+|.|+||+|+|++|||||+++||+|+++|+++. +.+++|++. ++++++||+++.++++
T Consensus 229 dADl~~Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~ 308 (464)
T 3k9d_A 229 SANIPRAVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQ 308 (464)
T ss_dssp TSCHHHHHHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHH
T ss_pred CCCHHHHHHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHH
Confidence 99999999999999999999999999999999999999999999986 456778887 6788999999999999
Q ss_pred HHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHH----HHHhcC
Q 012790 243 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVV----KLANDS 318 (456)
Q Consensus 243 ~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai----~~~n~~ 318 (456)
++.+++++++.+|+++++||.. ++++++++. ||+||||++|++|+|+|||| +++|++
T Consensus 309 ~i~~~~~~a~~~ga~vl~gg~~------------------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~ 369 (464)
T 3k9d_A 309 HIANLAGLTVPADARVLIAEET------------------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHE 369 (464)
T ss_dssp HHHHHTTCCCCTTCCEEEEECC------------------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHT
T ss_pred HHHHHhhhhhcCCCEEEEcCCC------------------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcC
Confidence 9999999888899999999861 467788865 89999999999999999997 799999
Q ss_pred CCCceeEEecCCHHHHHHHHHhcccCCeeecCCccc-------ccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEc
Q 012790 319 RYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASN-------YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 319 ~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~-------~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~ 391 (456)
+|||++||||+|.++++++++++++|+|+||++..+ ...+.+|||| |.+|.|+++|..|+++|++.|+|.+.
T Consensus 370 ~~gl~a~i~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~g~~~~~~~~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~ 448 (464)
T 3k9d_A 370 GAGHTLIIHSEDKEIIREFALKKPVSRLLVNTPGALGGIGATTNLVPALTLGC-GAVGGSSSSDNIGPENLFNIRRIATG 448 (464)
T ss_dssp TTEEEEEEECSCHHHHHHHHHHSSEEEEEESSCHHHHHTTSSSSSCCCSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEEC
T ss_pred CCCCeEEEEeCCHHHHHHHHHhCCEeEEEEECCccccccccCCCCCccccccC-cCCCCCcCCCCCCHHHheEEEEEEec
Confidence 999999999999999999999999999999997653 2356799998 88999999999999999999999763
|
| >2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-72 Score=589.13 Aligned_cols=333 Identities=17% Similarity=0.176 Sum_probs=282.5
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..||..+++.++|+++++++|.++.. +......+...+++++|+|||++|+||| |+..+ +++++||++||+||+||
T Consensus 97 a~~ev~~~~~~~~~~a~~~~~~~g~~~-~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaaGN~VVlKp 173 (463)
T 2h5g_A 97 STSKLNSLAIGLRQIAASSQDSVGRVL-RRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIASGNGLLLKG 173 (463)
T ss_dssp CHHHHHHHHHHHHHHHHHCTTSTTCEE-EEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHHHTCEEEEEC
T ss_pred hHHHHHHHHHHHHHHHHhhHhhcCccc-ccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHHcCCEEEEEC
Confidence 357999999999999999988876532 2110012335689999999999999887 77776 89999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgG 162 (456)
|+.+|+++.++++++.++|.++| |+|++|+|+|+.+.++.|++ ++|+|+||||+.+|+.|+++|+ +||+++||||
T Consensus 174 s~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~pv~lElGG 250 (463)
T 2h5g_A 174 GKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNTREEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK--GIPVMGHSEG 250 (463)
T ss_dssp CGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCTTCCC-------CCCSEEEEESCHHHHHHHHHHCS--SSCBCSCSCC
T ss_pred CCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--CCCEEEecCC
Confidence 99999999999999999988889 99999999995578899987 7999999999999999999988 9999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHH
Q 012790 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 242 (456)
Q Consensus 163 k~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~ 242 (456)
|||+||++|||++.|++.+++++|.| ||.|+|++|||||++++| ||+ ++
T Consensus 251 k~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d-------------------------~p~-----~~ 299 (463)
T 2h5g_A 251 ICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR-------------------------TPL-----FD 299 (463)
T ss_dssp CEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT-------------------------SHH-----HH
T ss_pred cceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc-------------------------hHH-----HH
Confidence 99999999999999999999999999 999999999999999998 232 33
Q ss_pred HHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCc
Q 012790 243 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 322 (456)
Q Consensus 243 ~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL 322 (456)
+++++++++|++++.|+.. ...++|+ +++|++++||+||||++|++|+|+||||+++|++++||
T Consensus 300 ---~~i~~~~~~Ga~v~~G~~~-----~~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~~gL 363 (463)
T 2h5g_A 300 ---QIIDMLRVEQVKIHAGPKF-----ASYLTFS--------PSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSH 363 (463)
T ss_dssp ---HHHHHHHHTTCEEEECHHH-----HC-----------------CCSSCCCCSSEEEEEEESSHHHHHHHHHHHCCSS
T ss_pred ---HHHHHHHhCCCEEEeCCcc-----cccCccC--------CCCchHHhccccCceEEEEEeCCHHHHHHHHHcCCCCc
Confidence 3578888899999855431 1234442 57899999999999999999999999999999999999
Q ss_pred eeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCC--Cc--chHHHHhccceeeEEEEcc
Q 012790 323 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG--RF--AGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 323 ~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G--~~--~g~~gl~~ft~~k~v~~~~ 392 (456)
++||||+|.++++++++++++|+|+||++... .+.+||||+|+||+| ++ +|++||++||+.|+|+.+.
T Consensus 364 aa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~--~~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~~ 435 (463)
T 2h5g_A 364 TDVIVTEDENTAEFFLQHVDSACVFWNASTRF--SDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGK 435 (463)
T ss_dssp EEEEECSCHHHHHHHHHHCCSSEEEESSCGGG--CSTTTTTSSCCSCEECCSSSCCEECCGGGGEEEEEEEECS
T ss_pred eEEEEeCCHHHHHHHHHhCCeeEEEEeCCccC--CCCCCCCCCccCcCCCCcccCCCHHHHHHhceeEEEEECC
Confidence 99999999999999999999999999997543 356999999999999 76 9999999999999998865
|
| >4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-71 Score=573.30 Aligned_cols=331 Identities=19% Similarity=0.227 Sum_probs=275.1
Q ss_pred HHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecCCC
Q 012790 8 EIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSEN 87 (456)
Q Consensus 8 Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~ 87 (456)
|+..+++.++|+++..+. . .+..+......+...+++++|+|||++|+||| | .++++++++||++||+||+|||+.
T Consensus 98 ~v~~~~~~l~~~a~~~~~-~-g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~ 173 (444)
T 4ghk_A 98 ALKTMVEGLRQVATLPDP-I-GEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSE 173 (444)
T ss_dssp HHHHHHHHHHHHHHSCCC-T-TCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGG
T ss_pred HHHHHHHHHHHHHhhccc-c-CccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCcc
Confidence 677778888887766542 1 11111100012346789999999999999998 8 688999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCC-h-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCCc
Q 012790 88 ASWSGCFYFRIIQAALAAVGAPENLVDVITGF-A-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK 163 (456)
Q Consensus 88 ~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~-~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgGk 163 (456)
+|+++.++++++.++|.++|+|+|++|+|+|+ . +.++.|.. ++|+|+||||+.+|+.|++.+ +||+++|||||
T Consensus 174 tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a---~~pv~lELGGk 250 (444)
T 4ghk_A 174 ALESNTALAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA---RVPMIKHLDGI 250 (444)
T ss_dssp GHHHHHHHHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---CSCBCCCCCCC
T ss_pred chHHHHHHHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC---CCCEEEEcCCc
Confidence 99999999999999999999999999999984 4 46777765 799999999999999999877 69999999999
Q ss_pred ceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhcccc---CCCCCCCCccccccCHHH
Q 012790 164 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA---GPPLAGKYDMGALCLLEH 240 (456)
Q Consensus 164 ~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~---g~~~~~~~~~gpli~~~~ 240 (456)
||+||++|||++.|++.+++++|.|+| .|+|++|||||++++|+|+++|+++++++++ |+|.
T Consensus 251 ~p~IV~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~-------------- 315 (444)
T 4ghk_A 251 CHVYVDDRASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD-------------- 315 (444)
T ss_dssp CEEEECTTCCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH--------------
T ss_pred CeEEECCCCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH--------------
Confidence 999999999999999999999999999 9999999999999999999999999999987 6542
Q ss_pred HHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCC
Q 012790 241 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRY 320 (456)
Q Consensus 241 ~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~ 320 (456)
..++++++. . | ++ ++++|++++||+||||++|++|+|+||||+++|+++|
T Consensus 316 ---~~~~i~~a~--------~-----------G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~ 365 (444)
T 4ghk_A 316 ---ARAVLEAAG--------V-----------G------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGS 365 (444)
T ss_dssp ---HHHHHHHTT--------C-----------C------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSC
T ss_pred ---HHHHHHhcc--------c-----------C------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCC
Confidence 135565431 0 1 12 3567899999999999999999999999999999999
Q ss_pred CceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCC----CcchHHHHhccceeeEEEEcc
Q 012790 321 GLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG----RFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 321 gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G----~~~g~~gl~~ft~~k~v~~~~ 392 (456)
||++||||+|.++++++++++++|+|+||++... .+.+||||.+.||+| +++|++||++||+.|+|+...
T Consensus 366 gL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~--~~~~pfGg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~~ 439 (444)
T 4ghk_A 366 HHTDAIVTEDHDRAMRFLREVDSASVMVNASTRF--ADGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGH 439 (444)
T ss_dssp SSEEEEECSBHHHHHHHHHHCCSSEEEEEECGGG--CSTTTTTCSCCSEEECCSSSCCEEECGGGGEEEEEEEEEE
T ss_pred CceEEEEeCCHHHHHHHHHhCCcceEEEcCCCcc--CCCCCcCCcccccccCCcccCCChhHHHhhceEEEEEECC
Confidence 9999999999999999999999999999997654 346899999999998 789999999999999998765
|
| >1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-70 Score=569.75 Aligned_cols=330 Identities=19% Similarity=0.194 Sum_probs=285.1
Q ss_pred HHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecCC
Q 012790 7 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 86 (456)
Q Consensus 7 ~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~ 86 (456)
.|+..+++.++|+++.+++ .. +..+......+...+++++|+|||++|+||| +.++++++++||++||+||+|||+
T Consensus 85 ~ev~~~~~~l~~~a~~~~~-~g-~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~ 160 (427)
T 1o20_A 85 KRIDEMIKACETVIGLKDP-VG-EVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGS 160 (427)
T ss_dssp HHHHHHHHHHHHHHHSCCC-TT-CEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCG
T ss_pred HHHHHHHHHHHHHHhcccc-cC-ccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCH
Confidence 5888889999988876653 21 1111000001234688999999999999886 478999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHcCCCCCcEEEEeC-Ch-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCC
Q 012790 87 NASWSGCFYFRIIQAALAAVGAPENLVDVITG-FA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 162 (456)
Q Consensus 87 ~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g-~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgG 162 (456)
.+|+++.++++++.++|.++|+|+|++|+|+| +. +.++.|.. ++|+|+||||+++|+.|++++ +||+++||||
T Consensus 161 ~tp~t~~~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a---~~~v~lELGG 237 (427)
T 1o20_A 161 DALNSNKAIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA---TVPVLETGVG 237 (427)
T ss_dssp GGHHHHHHHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---SSCBCCCCCC
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc---CCCEEEecCC
Confidence 99999999999999999999999999999998 44 45777775 899999999999999999988 5999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHH
Q 012790 163 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 242 (456)
Q Consensus 163 k~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~ 242 (456)
|||+||++|||++.|++.+++++|.|+| .|+|++|||||++++|+|+++|++++++++++
T Consensus 238 k~p~iV~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~------------------- 297 (427)
T 1o20_A 238 NCHIFVDESADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE------------------- 297 (427)
T ss_dssp CEEEEECTTSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE-------------------
T ss_pred CceEEEeCCCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe-------------------
Confidence 9999999999999999999999999999 99999999999999999999999999987642
Q ss_pred HHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCc
Q 012790 243 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 322 (456)
Q Consensus 243 ~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL 322 (456)
+.||.. ..+ |+ ||| ++++|++++||+||||++|++|+|+||||+++|+++|||
T Consensus 298 ----------------~~gg~~------~~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL 350 (427)
T 1o20_A 298 ----------------VRGCEK------TRE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGH 350 (427)
T ss_dssp ----------------EEECHH------HHH-HS-TTS---EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSS
T ss_pred ----------------eecChh------hhh-hC-Ccc---cCCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCC
Confidence 223321 012 33 886 346789999999999999999999999999999999999
Q ss_pred eeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCC----CcchHHHHhccceeeEEEEcc
Q 012790 323 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG----RFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 323 ~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G----~~~g~~gl~~ft~~k~v~~~~ 392 (456)
++||||+|.++++++++++++|+|+||++... .+.+||||.|+||+| +++|++|+++||+.|+|+.+.
T Consensus 351 ~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~--~~~~pfGg~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~ 422 (427)
T 1o20_A 351 SESILTENYSNAKKFVSEIDAAAVYVNASTRF--TDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGE 422 (427)
T ss_dssp EEEEECSCHHHHHHHHHHCCSSEEEESSCGGG--CSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECS
T ss_pred eEEEEeCCHHHHHHHHHhCCccEEEECCCCcc--CCCCCCCCcccccccCCcccCCChHHHHHHhceEEEEECC
Confidence 99999999999999999999999999987543 346899999999997 478999999999999998764
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-66 Score=542.00 Aligned_cols=321 Identities=17% Similarity=0.227 Sum_probs=271.1
Q ss_pred ccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCC-
Q 012790 41 KKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF- 119 (456)
Q Consensus 41 ~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~- 119 (456)
...++.++|+|||++|+|||||++++++++++||++||+||+||||.+|.++..+++++.+++.++|+|+|++|+|+|.
T Consensus 95 ~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~a~~~aG~P~gvv~~v~g~~ 174 (452)
T 3my7_A 95 LGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPS 174 (452)
T ss_dssp --CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHHHHTTCCTTSEEECSSCC
T ss_pred CceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHHHHHHcCCCcCcEEEEcCCC
Confidence 4568899999999999999999999999999999999999999999999999999999999999999999999999995
Q ss_pred hHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCC
Q 012790 120 AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAE 197 (456)
Q Consensus 120 ~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~ 197 (456)
.+.+++|++ ++|+|+||||+.++ +++++++||+++|+|||||+||++|||++.|++.+++|+|.|+||.|+|++
T Consensus 175 ~~~~~~L~~~p~v~~V~fTGs~~~~----~~a~~~~kp~~~e~gG~~p~iV~~dADl~~Aa~~iv~s~~~~~GQ~C~a~~ 250 (452)
T 3my7_A 175 VELSNALMKHDDIALILATGGPGMV----KAAYSSGKPAIGVGAGNVPVVIDETADIKRAVASVLMSKTFDNGVVCASEQ 250 (452)
T ss_dssp HHHHHHHHHCTTCCEEEECSCHHHH----HHHHTSSSCEEECC--CEEEEECTTSCHHHHHHHHHHGGGGGGGCCTTCEE
T ss_pred HHHHHHHHhCCCccEEEEECcHHHH----HHHHhcCCCEEecCCCCCeEEEeCCCCHHHHHHHHHHHHhCCCCCccCCCc
Confidence 488999998 89999999999854 467788999999999999999999999999999999999999999999999
Q ss_pred eEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccc
Q 012790 198 RFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFP 277 (456)
Q Consensus 198 ~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~ 277 (456)
|||||+++||+|+++|+++ .||+++++++++++++++++.+.|+++ .||..... ....|+|++
T Consensus 251 rv~V~~~i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a~v-~G~~~~~~-~~~~G~~v~ 313 (452)
T 3my7_A 251 AVIVVDEVYDEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNAKI-VGQPATAI-AEMAGVKVP 313 (452)
T ss_dssp EEEEEGGGHHHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECGGG-TTCCHHHH-HHHHTCCCC
T ss_pred EEEEcHHHHHHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCCeE-ecCccchh-HHhCCceeC
Confidence 9999999999999999874 399999999999999998766667776 46642100 013589999
Q ss_pred cee-------eecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCC----CCceeEEecCCHHHHHH---HHHhccc
Q 012790 278 PTV-------IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSR----YGLGCAVFSGSQHRARE---IAAQIQC 343 (456)
Q Consensus 278 Ptv-------l~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~----~gL~~~vft~d~~~~~~---~~~~l~~ 343 (456)
||+ ++++++++++++ |+||||++|++|+|+||||+++|++. |||++||||+|.+.+++ +++++++
T Consensus 314 pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~t~d~~~a~~i~~~a~~l~~ 392 (452)
T 3my7_A 314 ADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKMKT 392 (452)
T ss_dssp TTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEESCTTTCHHHHHHHHHHCCC
T ss_pred CCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEEcCCHHHHHHHHHHHHhCCE
Confidence 998 778999999886 89999999999999999999999985 99999999999877777 9999999
Q ss_pred CCeeecCCcccccCcCCCccCCCCC-----------CCCCcc-----hHHHHhccceeeEEEEc
Q 012790 344 GVAAINDFASNYMCQSLPFGGVKDS-----------GFGRFA-----GVEGLRACCLVKSVVED 391 (456)
Q Consensus 344 G~v~iN~~~~~~~~~~~PfGG~~~S-----------G~G~~~-----g~~gl~~ft~~k~v~~~ 391 (456)
|+|+||++ .||||+|.. |.|.++ +.-+.+.+.+.|+|.+.
T Consensus 393 G~V~VN~~--------~~~Gg~G~~~~f~~~~~~t~g~g~~Gg~~~~~nv~~~~l~n~~~v~~~ 448 (452)
T 3my7_A 393 ARILINIP--------TTHGGIGDLYNFNVAPSLTLGCGSWGGNSISENVGPKHLINKKTVAKR 448 (452)
T ss_dssp SEEEESCC--------CC----------------------------CCCCCGGGGEEEEEEECC
T ss_pred EEEEECCC--------CCCcccccccccCcCceEeeeccccCCCccCCCCChhHeeeeeEEEee
Confidence 99999984 355555431 333333 34455666677776554
|
| >1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A | Back alignment and structure |
|---|
Probab=97.10 E-value=0.28 Score=49.36 Aligned_cols=280 Identities=16% Similarity=0.160 Sum_probs=158.3
Q ss_pred HHHHHHHHHHhhhhhhCCcccCCCcc---cccccceEEEecceEEEEEcCC---ccchHhhHHHHHHHHhcCCeEEEecC
Q 012790 12 TCEKITWLLSEGEKWLKPEYRSSGRS---MIHKKAKVEFHPLGVVGAIVSW---NYPFHNIFNPMLAAVFSGNGIVIKVS 85 (456)
Q Consensus 12 ~~~~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~vi~p~---N~P~~~~~~~~~~ALaaGN~VvlKps 85 (456)
..+.|+...++.+++-+.|... ... ..+.....++.|+--|++..|. -|| ++.++..+||-.||+.=|+-.+
T Consensus 84 ~~~ai~~A~~nI~~fH~~Q~~~-~~~~~~~~Gv~~gq~~~Pi~rvGlYVPGG~a~yp-SsvLM~aiPAkVAGV~~Iv~~t 161 (434)
T 1kae_A 84 LKQAMAVAVKNIETFHTAQKLP-PVDVETQPGVRCQQVTRPVASVGLYIPGGSAPLF-STVLMLATPASIAGCKKVVLCS 161 (434)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCC-CEEEEEETTEEEEEEEEECSEEEEECCCSSSCCT-HHHHHHHHHHHHHTCSEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhcCC-CceEEecCCcEEEEEEeehheEEEEecCCCCCch-hHHHHhhccHhhcCCCeEEEEC
Confidence 3455556666665554333321 211 1233455678999999999997 355 5567778899999987555433
Q ss_pred C--CChhHHHHHHHHHHHHHHHcCCCCCcEEEEe-CChHhHHHHHh------ccCEEEecCCHHHHHHHHHHhhc-cCCc
Q 012790 86 E--NASWSGCFYFRIIQAALAAVGAPENLVDVIT-GFAETGEALVS------SVDKIIFVGSPGVGRMIMRNASK-TLTP 155 (456)
Q Consensus 86 ~--~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~-g~~~~~~~L~~------~vd~i~fTGS~~~g~~v~~~aa~-~~~p 155 (456)
| .+|.+ |+ +...+|..+ +.. |+...-.+|.- +||+|+=.|..=+..+ +.... ....
T Consensus 162 Pp~i~p~i---L~-----AA~l~Gv~e----Iy~vGGAQAIAAlAyGTetIp~VDkI~GPGN~yVa~A--Kr~Vs~~~G~ 227 (434)
T 1kae_A 162 PPPIADEI---LY-----AAQLCGVQD----VFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEA--KRQVSQRLDG 227 (434)
T ss_dssp CSSCCHHH---HH-----HHHHTTCCE----EEECCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHH--HHHHHHCTTS
T ss_pred CCCCCHHH---HH-----HHHHcCCCE----EeecccHHHHHHHHcCCCCCCCccEEECCCcHHHHHH--HHHhHhhcCc
Confidence 3 33332 21 123467654 222 54455555542 8999998888765331 11110 0111
Q ss_pred ccccC-CCcceEEE--cCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEeh--hhHHHHHHHHHHHHhccccCCCCCCCC
Q 012790 156 VTLEL-GGKDAFIV--CDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHR--DIYALFVSQVAKIVKSVSAGPPLAGKY 230 (456)
Q Consensus 156 v~lEl-gGk~p~iV--~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~--~i~d~f~~~l~~~~~~~~~g~~~~~~~ 230 (456)
|-..+ .|.|=++| |++||.+..+..++..+=+.. .| +.++|.. +..++..+.+.+.++.+.
T Consensus 228 VgIDm~AGPSEilViAD~tAnp~~vAaDLLsQAEHd~----~a-~aiLvT~s~~la~~V~~ev~~ql~~lp--------- 293 (434)
T 1kae_A 228 AAIDMPAGPSEVLVIADSGATPDFVASDLLSQAEHGP----DS-QVILLTPAADMARRVAEAVERQLAELP--------- 293 (434)
T ss_dssp CEESCCCCCCEEEEEECTTSCHHHHHHHHHHHHTTCT----TC-EEEEEESCHHHHHHHHHHHHHHHTTCT---------
T ss_pred cccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhccCC----CC-cEEEEECCHHHHHHHHHHHHHHHHhCC---------
Confidence 22222 25555443 446899988877776554332 23 3445543 444555444444444331
Q ss_pred ccccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHH
Q 012790 231 DMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEE 310 (456)
Q Consensus 231 ~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~e 310 (456)
. .+.++.+. ..- .|+.++|++|
T Consensus 294 ---------r----~~ia~~sl--------------------------------------------~~~-~ii~v~~l~e 315 (434)
T 1kae_A 294 ---------R----AETARQAL--------------------------------------------NAS-RLIVTKDLAQ 315 (434)
T ss_dssp ---------T----HHHHHHHH--------------------------------------------TTC-EEEECSSHHH
T ss_pred ---------h----HHHHHHHH--------------------------------------------HcC-eEEEECCHHH
Confidence 0 11122221 112 3556899999
Q ss_pred HHHHHhcCCCCceeEEecCCHHHHHHHHHhcc-cCCeeecCCccc-------ccCcCCCccCCCCCCCCCcchHHHHhcc
Q 012790 311 VVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ-CGVAAINDFASN-------YMCQSLPFGGVKDSGFGRFAGVEGLRAC 382 (456)
Q Consensus 311 ai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~-~G~v~iN~~~~~-------~~~~~~PfGG~~~SG~G~~~g~~gl~~f 382 (456)
|++++|..- +=..-|.++|.. .+..+++ +|.|++..+..- ..++-+| .+|..|+.|.-+.+.|
T Consensus 316 a~~~~N~~A-PEHLel~~~dp~---~~l~~I~nAGaIFlG~~tpe~~GDY~aG~NHvLP-----T~G~AR~~sgLsV~~F 386 (434)
T 1kae_A 316 CVEISNQYG-PEHLIIQTRNAR---ELVDSITSAGSVFLGDWSPESAGDYASGTNHVLP-----TYGYTATCSSLGLADF 386 (434)
T ss_dssp HHHHHHHHC-CSEEEEESTTHH---HHGGGCCSCSEEEESTTCCHHHHHHTSSSCCCCC-----CTTGGGTCCCSCGGGG
T ss_pred HHHHHHHhh-hHhhhhhhcCHH---HHHhhcCcccchhcCCCCchhhcccccCCCcccC-----CCCceeccCCCcHHhc
Confidence 999999842 235778888864 5667775 899999965221 1123344 3566777777788888
Q ss_pred ceeeEE
Q 012790 383 CLVKSV 388 (456)
Q Consensus 383 t~~k~v 388 (456)
...-++
T Consensus 387 ~K~~s~ 392 (434)
T 1kae_A 387 QKRMTV 392 (434)
T ss_dssp EEEEEE
T ss_pred cceeeE
Confidence 765554
|
| >4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.45 Score=47.82 Aligned_cols=254 Identities=17% Similarity=0.216 Sum_probs=142.3
Q ss_pred cccceEEEecceEEEEEcCCc---cchHhhHHHHHHHHhcCCeEE--EecCCCChhHHHHHHHHHHHHHHHcCCCCCcEE
Q 012790 40 HKKAKVEFHPLGVVGAIVSWN---YPFHNIFNPMLAAVFSGNGIV--IKVSENASWSGCFYFRIIQAALAAVGAPENLVD 114 (456)
Q Consensus 40 ~~~~~~~~~P~GVv~vi~p~N---~P~~~~~~~~~~ALaaGN~Vv--lKps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~ 114 (456)
+.....++.|+--|++..|.- || ++.++..+||-.||+.=| .-|++..-.....|+ +...+|..+
T Consensus 120 G~~~g~~~~Pi~~VGlYVPGG~A~yp-SsvLM~aiPAkVAGV~~Iv~~tPp~~G~i~p~iL~-----AA~l~Gv~e---- 189 (423)
T 4gic_A 120 GTLLGQKITPLDRVGLYVPGGKAAYP-SSVLMNAVPAKVAGVPELIMAVPAPRGELNALVLA-----AAYISGVDR---- 189 (423)
T ss_dssp SCEEEEEEEECSEEEEECCCSTTCCH-HHHHHHHHHHHHHTCSEEEEECCCGGGCCCHHHHH-----HHHHHTCCE----
T ss_pred CCEEEEEEEEecceeEEeeCCCCchh-hHHHHhhccHHHhCCCeEEEecCCCCCCccHHHHH-----HHHhcCCcE----
Confidence 344567899999999999954 55 556777889999999633 334322111111121 123466654
Q ss_pred EEe-CChHhHHHHHh------ccCEEEecCCHHHHHHHHHHhhccCCcccccC-CCcceEEE--cCCCCHHHHHHHHHHH
Q 012790 115 VIT-GFAETGEALVS------SVDKIIFVGSPGVGRMIMRNASKTLTPVTLEL-GGKDAFIV--CDDVDVPHVAQIAVRA 184 (456)
Q Consensus 115 vv~-g~~~~~~~L~~------~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lEl-gGk~p~iV--~~daDl~~aa~~i~~~ 184 (456)
+.. |+...-.+|.- .||+|+=.|..=+..+ ++... ..|-..+ .|.+=++| +++||.+..|..++..
T Consensus 190 Iy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~A--Kr~v~--g~VgIDm~AGPSEilViAD~~a~p~~vAaDLlsQ 265 (423)
T 4gic_A 190 VFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATA--KKLVF--GQVGIDMVAGPSEILVISDGRTDPDWIAMDLFSQ 265 (423)
T ss_dssp EECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHH--HHHHB--TTBEECCCCCCCEEEEEECSCSCHHHHHHHHHHH
T ss_pred EEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHH--HHHhc--CCcCcccccccceEEEEeCCCCCHHHHHHHHHHh
Confidence 333 44455555542 8999999998766432 22111 1122222 25554433 3458999888877766
Q ss_pred HhhCCCCCcccCCeEEEeh--hhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCeEeecC
Q 012790 185 ALQSSGQNCAGAERFYVHR--DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG 262 (456)
Q Consensus 185 ~~~n~GQ~C~a~~~v~V~~--~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG 262 (456)
+=+.. .| +.++|.. +..++..+.+.+.++.+. ..+ .+..+..+
T Consensus 266 AEHd~----~a-~~iLvT~s~~la~~V~~~i~~~l~~l~------------------r~~----i~~~sl~~-------- 310 (423)
T 4gic_A 266 AEHDE----DA-QAILISPDAAHLEAVQASIERLLPGME------------------RAE----VIRTSLER-------- 310 (423)
T ss_dssp HTTCT----TC-EEEEEESCHHHHHHHHHHHHHHGGGCT------------------THH----HHHHHHHH--------
T ss_pred hccCC----CC-eEEEEeCcHHHHHHHHHHHHHHHhhCc------------------cHH----HHHHHHhc--------
Confidence 54432 22 3445544 444555555555444431 011 11222111
Q ss_pred CCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCceeEEecCCHHHHHHHHHhcc
Q 012790 263 SFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ 342 (456)
Q Consensus 263 ~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~ 342 (456)
+| .++.++|++|+++++|..- +=..-|.++|.. .+..+++
T Consensus 311 ---------------------------------~g---~ii~v~~~~ea~~~~N~~A-PEHLel~~~~~~---~~l~~i~ 350 (423)
T 4gic_A 311 ---------------------------------RG---GMILVDDLEQAAAVANRIA-PEHLELSVESPE---VLVESIR 350 (423)
T ss_dssp ---------------------------------HC---EEEECSSHHHHHHHHHHHC-CSEEEEESSCHH---HHGGGCC
T ss_pred ---------------------------------Cc---eEEEEeehHHHHHHHHhhC-hHHhhhhhCCHH---HHHhhCc
Confidence 11 2445799999999999842 235677888864 4777776
Q ss_pred -cCCeeecCCcccccCcCCCccCC--------CCCCCCCcchHHHHhccceeeEE
Q 012790 343 -CGVAAINDFASNYMCQSLPFGGV--------KDSGFGRFAGVEGLRACCLVKSV 388 (456)
Q Consensus 343 -~G~v~iN~~~~~~~~~~~PfGG~--------~~SG~G~~~g~~gl~~ft~~k~v 388 (456)
+|.|++..+.. .++|.+ ..+|..|+.+.-+.+.|...-++
T Consensus 351 nAGaIFlG~~tp------~~~GDY~aG~NHvLPT~G~Ar~~sgLsv~~F~K~~s~ 399 (423)
T 4gic_A 351 NAGAIFMGRYTA------EALGDYCAGPNHVLPTSGTARFSSPLGVYDFQKRSSL 399 (423)
T ss_dssp CCSEEEEC----------------------CCCCTTGGGTCCCCCGGGGEEEEEE
T ss_pred EeceeecCCCCc------hhhhhcCcCCCccCCCCCcccccCCCCHHHeeeeeeE
Confidence 89999986421 223322 13577778887788888765554
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 456 | ||||
| d1a4sa_ | 503 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 2e-89 | |
| d1bxsa_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 6e-89 | |
| d1o04a_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 4e-86 | |
| d1wnda_ | 474 | c.82.1.1 (A:) Putative betaine aldehyde dehydrogen | 7e-73 | |
| d1ad3a_ | 446 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 6e-71 | |
| d1uzba_ | 516 | c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen | 3e-61 | |
| d1euha_ | 474 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-59 | |
| d1ky8a_ | 499 | c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3 | 5e-53 | |
| d1o20a_ | 414 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 6e-23 | |
| d1ez0a_ | 504 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 3e-17 |
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Score = 279 bits (714), Expect = 2e-89
Identities = 117/354 (33%), Positives = 178/354 (50%), Gaps = 10/354 (2%)
Query: 40 HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 99
A PLGV I++WNYPF A+ GN +V K S +G I
Sbjct: 146 GAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIF 205
Query: 100 QAALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVT 157
A G P LV+V+ G AETG L V K+ F GS G+ +M ++KT+ VT
Sbjct: 206 HEA----GVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVT 261
Query: 158 LELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 217
LELGGK ++ D ++ + + A+ A + GQ C R +V R+I F+ +V K
Sbjct: 262 LELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRT 321
Query: 218 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--Y 275
K++ G PL + MG L +K+ V A +GA +L G S+ + +
Sbjct: 322 KAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYF 381
Query: 276 FPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAR 335
P V+ N M ++EE FGP+M ++ F+T+EEV++ AN++ +GL VF+ RA
Sbjct: 382 MSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAH 441
Query: 336 EIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389
+AA ++ G IN ++ + + +PFGG K SGFGR G + +K+V+
Sbjct: 442 RVAANLEAGTCYINTYSISPV--EVPFGGYKMSGFGRENGQATVDYYSQLKTVI 493
|
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Score = 277 bits (710), Expect = 6e-89
Identities = 112/386 (29%), Positives = 177/386 (45%), Gaps = 17/386 (4%)
Query: 8 EIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF 67
+ C K + ++ + P+GV G I+ WN+P
Sbjct: 114 MDLGGCIKTLRYCAGWADKIQGRTIPMDGNFF---TYTRSEPVGVCGQIIPWNFPLLMFL 170
Query: 68 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEAL 126
+ A+ GN +V+K +E + +I+ A G P +V+++ G+ G A+
Sbjct: 171 WKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEA----GFPPGVVNIVPGYGPTAGAAI 226
Query: 127 VSS--VDKIIFVGSPGVGRMIMRNASK-TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVR 183
S VDK+ F GS VG++I A K L V+LELGGK IV D D+ + + A +
Sbjct: 227 SSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQ 286
Query: 184 AALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEK 243
GQ C A R +V IY FV + + K G PL G E EK
Sbjct: 287 GVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEK 346
Query: 244 LQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIM 303
+ +L+ +GA++ G ++G + PTV +V M++ +EE FGP+ IM
Sbjct: 347 ILDLIESGKKEGAKLECGGG-PWGNKGY---FIQPTVFSDVTDDMRIAKEEIFGPVQQIM 402
Query: 304 KFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFG 363
KF + ++V+K AN++ YGL +F+ +A +++ +Q G +N + + + PFG
Sbjct: 403 KFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCY--SVVSAQCPFG 460
Query: 364 GVKDSGFGRFAGVEGLRACCLVKSVV 389
G K SG GR G G VK+V
Sbjct: 461 GFKMSGNGRELGEYGFHEYTEVKTVT 486
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Score = 270 bits (691), Expect = 4e-86
Identities = 120/349 (34%), Positives = 171/349 (48%), Gaps = 14/349 (4%)
Query: 45 VEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALA 104
P+GV G I+ WN+P + A+ +GN +V+KV+E + + +I+ A
Sbjct: 148 TRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA-- 205
Query: 105 AVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNA-SKTLTPVTLEL 160
G P +V+++ GF G A+ S VDK+ F GS +GR+I A S L VTLEL
Sbjct: 206 --GFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLEL 263
Query: 161 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 220
GGK I+ D D+ + A A + GQ R +V DIY FV + KS
Sbjct: 264 GGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSR 323
Query: 221 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTV 280
G P K + G +K+ +N +GA++L G G + PTV
Sbjct: 324 VVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI-AADRGY---FIQPTV 379
Query: 281 IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQ 340
+V M + +EE FGP+M I+KF T EEVV AN+S YGL AVF+ +A ++
Sbjct: 380 FGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQA 439
Query: 341 IQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389
+Q G +N + + PFGG K SG GR G GL+A VK+V
Sbjct: 440 LQAGTVWVNCY--DVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVT 486
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Score = 235 bits (599), Expect = 7e-73
Identities = 97/353 (27%), Positives = 166/353 (47%), Gaps = 13/353 (3%)
Query: 40 HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 99
+ + PLGVV +I WNYP + A+ +GN +V+K SE + +
Sbjct: 129 GHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELA 188
Query: 100 QAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPV 156
+ P +V+++ G G+ L V + GS G I+ + + ++
Sbjct: 189 KDIF-----PAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRT 243
Query: 157 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 216
+ELGGK IV DD D+ V + ++GQ+C A R Y + IY V ++
Sbjct: 244 HMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAA 303
Query: 217 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 276
V ++ +G P ++G L L H E++ V +A G + G G Y+
Sbjct: 304 VATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGY---YY 360
Query: 277 PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRARE 336
PT++ ++Q+E FGP++ + F+ +E+VV ANDS+YGL +V++ RA
Sbjct: 361 APTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHR 420
Query: 337 IAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 389
++A++Q G +N + +P GG K SG+G+ + GL +V+ V+
Sbjct: 421 VSARLQYGCTWVNTH--FMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVM 471
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 229 bits (584), Expect = 6e-71
Identities = 109/406 (26%), Positives = 174/406 (42%), Gaps = 19/406 (4%)
Query: 3 DASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYP 62
+ E+ E++ + E W + E + R + PLGVV I +WNYP
Sbjct: 56 TSYYEEVAHVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYP 115
Query: 63 FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET 122
F+ PM+ AV +GN +++K SE + +I + V G ET
Sbjct: 116 FNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQ----YMDQNLYLVVKGGVPET 171
Query: 123 GEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAV 182
E L D I++ GS VG+++M A+K LTPVTLELGGK V D D+ +
Sbjct: 172 TELLKERFDHIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIA 231
Query: 183 RAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 242
+SGQ C + I V ++ K +K G D G + H +
Sbjct: 232 WGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDF-YGEDAKQSRDYGRIINDRHFQ 290
Query: 243 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPI 302
+++ L+++ + S Y PT++V+V+ +MQEE FGP+MPI
Sbjct: 291 RVKGLIDNQKVAHGGTWDQSSR----------YIAPTILVDVDPQSPVMQEEIFGPVMPI 340
Query: 303 MKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPF 362
+ + EE ++ N L VFS ++ +++ A+ G ND + +LPF
Sbjct: 341 VCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPF 400
Query: 363 GGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYP 408
GGV +SG G + G + +S + + +YP
Sbjct: 401 GGVGNSGMGAYHGKKSFETFSHRRSCLVKSLLN----EEAHKARYP 442
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 205 bits (522), Expect = 3e-61
Identities = 98/366 (26%), Positives = 154/366 (42%), Gaps = 21/366 (5%)
Query: 38 MIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFR 97
+ + + PLG I WN+P ++ V GN ++ K +E+A G F
Sbjct: 162 YPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFE 221
Query: 98 IIQAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNA----- 149
I A G P +V+ + G E G LV + I F GS VG I A
Sbjct: 222 IFHEA----GFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAP 277
Query: 150 -SKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYAL 208
+E GGK+A IV + D A+ V +A GQ C+ A R + + Y
Sbjct: 278 GQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEP 337
Query: 209 FVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLS 268
+ +V K + +S GP D+G + E K+ + + ++G +L
Sbjct: 338 VLERVLKRAERLSVGPAEENP-DLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLE--G 394
Query: 269 EGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFS 328
EG + PTV V ++ QEE FGP++ +++ E +++AND+ YGL V+S
Sbjct: 395 EGY---FIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYS 451
Query: 329 GSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG-VEGLRACCLVKS 387
+ + G N + + PFGG K SG G ++ LR +K+
Sbjct: 452 RKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKA 511
Query: 388 VVEDRW 393
V E R+
Sbjct: 512 VAE-RF 516
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Score = 200 bits (510), Expect = 1e-59
Identities = 107/357 (29%), Positives = 161/357 (45%), Gaps = 18/357 (5%)
Query: 38 MIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFR 97
K A V P+G+V AI +NYP + + + A+ +GN I K S SG
Sbjct: 131 SKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAE 190
Query: 98 IIQAALAAVGAPENLVDVITGF-AETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLT 154
A G P + + ITG +E G+ +V V+ I F GS G+G I + A +
Sbjct: 191 AFAEA----GLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MR 244
Query: 155 PVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVA 214
P+ LELGGKD+ IV +D D+ A+ + A SGQ C +R V + V ++
Sbjct: 245 PIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIR 304
Query: 215 KIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ 274
+ V +++ G P K + V ++ + A EG
Sbjct: 305 EKVLALTIGNPEDDADITP-----LIDTKSADYVEGLINDANDKGATALTEIKREGN--- 356
Query: 275 YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRA 334
P + V M+L EE FGP++PI++ + EE ++++N S YGL ++F+ RA
Sbjct: 357 LICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRA 416
Query: 335 REIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 391
IA Q++ G IN+ + PF G K SG G + A VKSVV D
Sbjct: 417 FGIAEQLEVGTVHINNKTQ-RGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFD 472
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Score = 183 bits (465), Expect = 5e-53
Identities = 94/365 (25%), Positives = 153/365 (41%), Gaps = 16/365 (4%)
Query: 38 MIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFR 97
+ + V PLGVV AI +NYP + N + + GN +V+K S + +
Sbjct: 144 TLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVK 203
Query: 98 IIQAALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTP 155
+ A G P + + ++ + E +V+ V + F GS VG +++ +
Sbjct: 204 ALLDA----GFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG--VKQ 257
Query: 156 VTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAK 215
+ELGG D IV +D D+ A R +GQ C + R +Y V +VAK
Sbjct: 258 YVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAK 317
Query: 216 IVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQY 275
+ S+ G P D+G L +++ + DA++KG +LA G + Q
Sbjct: 318 RLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTYV---QP 374
Query: 276 FPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAR 335
+ M L + E F P+ ++ ++ ++LAN YGL AVF + R
Sbjct: 375 TLVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIR 434
Query: 336 EIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED---- 391
++ G IND + + PFGG K SG R + A K++V +
Sbjct: 435 RAVRLLEVGAIYINDMPRHGIGY-YPFGGRKKSGVFREGIGYAVEAVTAYKTIVFNYKGK 493
Query: 392 RWWPY 396
W Y
Sbjct: 494 GVWKY 498
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Score = 98.2 bits (243), Expect = 6e-23
Identities = 61/391 (15%), Positives = 114/391 (29%), Gaps = 59/391 (15%)
Query: 3 DASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYP 62
D + E++ CE + L + + R G + + + + +
Sbjct: 71 DKRIDEMIKACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIG-------IIYESR 123
Query: 63 FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET 122
+ + A+ SGN I+++ +A S I+ AL PE+ V+ I +
Sbjct: 124 PNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIENTDRS 183
Query: 123 GEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAV 182
+ + + + + P G ++ T LE G + I D+ A +
Sbjct: 184 LVLEMIRLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADLKKAVPVI 243
Query: 183 RAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 242
A C AE+ VH I F+ + + ++
Sbjct: 244 INAKTQRPGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVR----------------- 286
Query: 243 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPI 302
+ V V T E I+ I
Sbjct: 287 -----------------------------GCEKTREIVPDVVPATEDDWPTEYLDLIIAI 317
Query: 303 MKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPF 362
+E ++ G ++ + + A++ ++I +N AS F
Sbjct: 318 KVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVN--ASTRFTDGGQF 375
Query: 363 GGVKDSGFGRF----AGVEGLRACCLVKSVV 389
G + G G GLR K VV
Sbjct: 376 GFGAEIGISTQRFHARGPVGLRELTTYKFVV 406
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Score = 81.7 bits (200), Expect = 3e-17
Identities = 15/116 (12%), Positives = 33/116 (28%), Gaps = 10/116 (8%)
Query: 274 QYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ-- 331
+EE FGP I+ +++ L+ L + + +
Sbjct: 353 ASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDY 412
Query: 332 HRAREIAAQIQ--CGVAAINDF-----ASNYMCQSLPFGGVKDSGFGRFAGVEGLR 380
+ ++ +++ G N + M P+ S G E +
Sbjct: 413 PQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSV-GAEAIH 467
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 456 | |||
| d1bxsa_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Sheep (O | 100.0 | |
| d1o04a_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Human (H | 100.0 | |
| d1a4sa_ | 503 | Aldehyde reductase (dehydrogenase), ALDH {Baltic c | 100.0 | |
| d1uzba_ | 516 | 1-pyrroline-5-carboxylate dehydrogenase {Thermus t | 100.0 | |
| d1ad3a_ | 446 | Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat | 100.0 | |
| d1wnda_ | 474 | Putative betaine aldehyde dehydrogenase YdcW {Esch | 100.0 | |
| d1ky8a_ | 499 | Non-phosphorylating glyceraldehyde-3-phosphate deh | 100.0 | |
| d1euha_ | 474 | Aldehyde reductase (dehydrogenase), ALDH {Streptoc | 100.0 | |
| d1ez0a_ | 504 | Aldehyde reductase (dehydrogenase), ALDH {Vibrio h | 100.0 | |
| d1o20a_ | 414 | Gamma-glutamyl phosphate reductase {Thermotoga mar | 100.0 | |
| d1vlua_ | 436 | Gamma-glutamyl phosphate reductase {Baker's yeast | 100.0 | |
| d1k75a_ | 431 | L-histidinol dehydrogenase HisD {Escherichia coli | 96.95 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Probab=100.00 E-value=1.5e-86 Score=699.14 Aligned_cols=374 Identities=30% Similarity=0.490 Sum_probs=346.7
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
...|+..+++.++|+++..+++.. +..+.. .....+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 112 ~~~ev~~~~~~~~~~a~~~~~~~~-~~~~~~---~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKp 187 (494)
T d1bxsa_ 112 YLMDLGGCIKTLRYCAGWADKIQG-RTIPMD---GNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKP 187 (494)
T ss_dssp HHTHHHHHHHHHHHHHHHGGGCCE-EEECCS---SSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred hhhhhhhhhHHHHHHhhhhhhhcc-eeecCC---CCceeEEEEccEEEEEEEeCccchhHHHHHHHHHHHHcCCeEEEEC
Confidence 345788889999999988876532 222221 2456789999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhc-cCCcccccC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASK-TLTPVTLEL 160 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~-~~~pv~lEl 160 (456)
||.+|+++.++++++. ++|+|+|++|+|+|++ +.++.|++ +||+|+||||+++|++|++.|++ ++||+++||
T Consensus 188 se~tp~~a~~l~~~~~----~aglP~gv~~~v~g~~~~~~~~l~~~p~v~~i~fTGS~~~g~~i~~~aa~~~~~~~~lEl 263 (494)
T d1bxsa_ 188 AEQTPLTALHMGSLIK----EAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLEL 263 (494)
T ss_dssp CTTCCHHHHHHHHHHH----HHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCCChHHHHHHHHHHH----HhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEecCCHHHHHHHHHHhcccCCCeEEEEc
Confidence 9999999999888875 6899999999999976 67899987 89999999999999999999885 699999999
Q ss_pred CCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHH
Q 012790 161 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 240 (456)
Q Consensus 161 gGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~ 240 (456)
|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++++
T Consensus 264 GG~np~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~ 343 (494)
T d1bxsa_ 264 GGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQ 343 (494)
T ss_dssp CCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTTCCBCCCSCHHH
T ss_pred CCcCcEEECcCcchhHhHHHHHHHHhcCCCcccccceEEecccchhHHHHHHHHhhhhheeeeccCCCCCcCCCcCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCC
Q 012790 241 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRY 320 (456)
Q Consensus 241 ~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~ 320 (456)
+++++++|++|+++|+++++||... +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|
T Consensus 344 ~~~~~~~i~~a~~~Ga~~~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~~E~FGPvl~v~~~~~~~eai~~~n~~~~ 419 (494)
T d1bxsa_ 344 YEKILDLIESGKKEGAKLECGGGPW----GNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFY 419 (494)
T ss_dssp HHHHHHHHHHHHHTTCEECSCCSEE----CSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCCcc----CCCceeEcCEEEeCCCCCcHHHhccccCceEEEEEECCHHHHHHHHhCCCC
Confidence 9999999999999999999999742 457899999999999999999999999999999999999999999999999
Q ss_pred CceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEcc
Q 012790 321 GLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 321 gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~ 392 (456)
||++||||+|.+.++++++++++|+|+||++... .+.+||||+|+||+|++||.+||++||+.|+|+++.
T Consensus 420 gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~~~SG~G~~~g~~~~~~ft~~k~i~~~~ 489 (494)
T d1bxsa_ 420 GLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVV--SAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIKI 489 (494)
T ss_dssp CSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCC--CTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred CCeEEEEeCCHHHHHHHHHhCCEeEEEEcCCCCc--CCCCCcCccccccCChhhHHHHHHHhcceEEEEEec
Confidence 9999999999999999999999999999987554 346999999999999999999999999999998864
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Probab=100.00 E-value=9.1e-86 Score=693.04 Aligned_cols=373 Identities=32% Similarity=0.489 Sum_probs=345.9
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
...|+..+++.++|+++.++++.. +..+.. .+...+++++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 112 ~~~ev~~~~~~~~~~a~~~~~~~~-~~~~~~---~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKp 187 (494)
T d1o04a_ 112 YLVDLDMVLKCLRYYAGWADKYHG-KTIPID---GDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKV 187 (494)
T ss_dssp HHTHHHHHHHHHHHHHHHTTTCCE-EEECCS---SSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred hhhHHHHHHHHHHHHHHHHHHhcC-ceeccC---CCceeEEEEecccEEEEECCcccHHHHHHHHHHHHHHcCCeEEEeC
Confidence 346888999999999998877543 222221 2456789999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhh-ccCCcccccC
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNAS-KTLTPVTLEL 160 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa-~~~~pv~lEl 160 (456)
|+.+|.++.++.+++. ++|+|+|++|+|+|++ +.++.|++ ++|+|+||||+++|++|+++|+ +++||+++||
T Consensus 188 s~~~p~~~~~l~~l~~----~aglP~gv~~~v~g~~~~~g~~L~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~~~~lEl 263 (494)
T d1o04a_ 188 AEQTPLTALYVANLIK----EAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLEL 263 (494)
T ss_dssp CTTSCHHHHHHHHHHH----HHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCCCcHHHHHHHHHHH----HhCcCcCeEEEEeCCChHHHHHHhhCCCcCEEEEeCCHHHHHHHHHHhhccCCCeEEEEC
Confidence 9999999998888765 6899999999999976 67899987 8999999999999999998876 7899999999
Q ss_pred CCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHH
Q 012790 161 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 240 (456)
Q Consensus 161 gGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~ 240 (456)
|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|++++.++++++++|+|.++++++||++++.+
T Consensus 264 GG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~ 343 (494)
T d1o04a_ 264 GGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQ 343 (494)
T ss_dssp CCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHH
T ss_pred CCcCcEEEccCccHHHHHHhhhhhccccCcccccccccccccchhhHHHHHHHHHHhhheeecCcccccCccCCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCC
Q 012790 241 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRY 320 (456)
Q Consensus 241 ~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~ 320 (456)
++|++++|++|+++|+++++||... .+.|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|
T Consensus 344 ~~~~~~~i~~a~~~Ga~vl~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~eE~FGPvl~v~~~~~~~eai~~an~~~~ 419 (494)
T d1o04a_ 344 FKKILGYINTGKQEGAKLLCGGGIA----ADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTY 419 (494)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCSBC----CSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHHHCCCEEEECCCcC----CCCCceEcCEEEeCCCCCCHHHhccccCceEEEEEeCCHHHHHHHHhCCCC
Confidence 9999999999999999999999742 356899999999999999999999999999999999999999999999999
Q ss_pred CceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEc
Q 012790 321 GLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 321 gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~ 391 (456)
||++||||+|.+.++++++++++|+|+||++.... +.+||||+|.||+|++||.+||++||+.|+|+++
T Consensus 420 gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~~--~~~PfGG~~~SG~G~~~g~~~~~~ft~~k~v~~~ 488 (494)
T d1o04a_ 420 GLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFG--AQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVK 488 (494)
T ss_dssp CSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCCC--TTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEEE
T ss_pred CCeEEEEeCCHHHHHHHHHhCCeeEEEEcCCCCCC--CCCCcCCcccccCCchhHHHHHHHhcCeEEEEEe
Confidence 99999999999999999999999999999876543 4689999999999999999999999999999875
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Probab=100.00 E-value=1.4e-84 Score=684.83 Aligned_cols=380 Identities=31% Similarity=0.487 Sum_probs=352.6
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEe
Q 012790 4 ASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIK 83 (456)
Q Consensus 4 ~~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlK 83 (456)
++..|+..+++.++|++...++...... .. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|
T Consensus 114 ea~~ev~~~~~~l~~~a~~~~~~~~~~~-~~---~~~~~~~~~~~P~GVv~~I~p~NfP~~~~~~~~~~ALaaGN~VV~K 189 (503)
T d1a4sa_ 114 EAEYDIDAAWQCIEYYAGLAPTLSGQHI-QL---PGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFK 189 (503)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGCCEEEE-EC---GGGCEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEE
T ss_pred hhhhhhhhhhhccccccccccccccccc-cc---CCCcccccccccceeeecccCCCChHHHHHHHHHHHHHcCCEEEEE
Confidence 3467999999999999998877543322 11 1245688999999999999999999999999999999999999999
Q ss_pred cCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCC
Q 012790 84 VSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 84 ps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg 161 (456)
||+.+|+++.++++++. ++|+|+|++|+|+|+.+.++.|++ +||+|+||||+++|++|++.+++++||+++|||
T Consensus 190 ps~~~p~~~~~l~~~~~----~aglP~gv~~~v~g~~e~g~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~~~lElG 265 (503)
T d1a4sa_ 190 PSPMTPVTGVILAEIFH----EAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELG 265 (503)
T ss_dssp CCTTSCHHHHHHHHHHH----HTTCCTTSEEECCCSHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECC
T ss_pred CCCCChHHHHHHHHHHH----HhCcCCCeEEEecCCHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcCCcEEEECC
Confidence 99999999999888875 689999999999998899999998 899999999999999999999999999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++|+|++++.+.++++++|+|.++.+++||++++.++
T Consensus 266 G~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~ri~v~~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~ 345 (503)
T d1a4sa_ 266 GKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQL 345 (503)
T ss_dssp CCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHH
T ss_pred CcCcEEECCCccHHHHhhhhhcchhccCCCccccCcceEEEechhhhHHHHHHHhhhhEeeccccccccccccccCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCC--CCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCC
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHL--SEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSR 319 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~--~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~ 319 (456)
+++++++++++++||++++||..... +....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++
T Consensus 346 ~~~~~~~~~a~~~Ga~v~~gg~~~~~~~~~~~~G~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~an~~~ 425 (503)
T d1a4sa_ 346 DKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTT 425 (503)
T ss_dssp HHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSS
T ss_pred HHHHHHHHHHHHcCCEEEECCcccCCCCcccCCceEEcCEEEeCCCCCCHHHhccccCceEEEEEcCCHHHHHHHHhCCC
Confidence 99999999999999999999975321 1235789999999999999999999999999999999999999999999999
Q ss_pred CCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEccc
Q 012790 320 YGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRW 393 (456)
Q Consensus 320 ~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~~ 393 (456)
|||++||||+|.+.++++++++++|+|+||++..+. +.+||||+|+||+|++||.+||++||+.|+|+++..
T Consensus 426 ~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~--~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~~~ 497 (503)
T d1a4sa_ 426 FGLASGVFTRDISRAHRVAANLEAGTCYINTYSISP--VEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVEMG 497 (503)
T ss_dssp CCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCC--TTSCBCCSGGGEECCBSTTGGGGGSEEEEEEEECCS
T ss_pred CCCeEEEEcCCHHHHHHHHHhCCeeEEEEeCCCCCC--CCCCccCcccCcCCcchHHHHHHHhhCeEEEEEcCC
Confidence 999999999999999999999999999999976543 469999999999999999999999999999998764
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=4.3e-83 Score=676.00 Aligned_cols=374 Identities=26% Similarity=0.402 Sum_probs=342.7
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEec
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 84 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKp 84 (456)
+..|+..+++.++|+++.+.++..+.....+ ......++.++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 131 a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~I~PwN~Pl~~~~~~~~~ALaaGN~Vv~Kp 208 (516)
T d1uzba_ 131 ASADVAEAIDFIEYYARAALRYRYPAVEVVP--YPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKP 208 (516)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGCSSCCCCCC--CTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEEC
T ss_pred cchhHHHHHHHHHHHHHHHHhhhhccccccc--ccccceeEEeeccCccccccccccccccccccccchhhhcccccccc
Confidence 4679999999999999998887654332221 22456688899999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhh------ccCCc
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNAS------KTLTP 155 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa------~~~~p 155 (456)
|+.+|+++.++.+++. ++|+|+|++|+|+|++ +.++.|++ ++|+|.||||+.+|+.|++.|+ +++||
T Consensus 209 s~~~p~~~~~l~~~~~----~aglP~gv~~~v~g~~~~~~~~L~~hp~v~~I~FTGs~~~G~~i~~~aa~~~~~~~~~k~ 284 (516)
T d1uzba_ 209 AEDAVVVGAKVFEIFH----EAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKR 284 (516)
T ss_dssp CGGGHHHHHHHHHHHH----HHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHTSCCTTCCSCCE
T ss_pred cchhHHHHHHHHHHHH----HhCcCcCeEEEccCChHHHHHHHHhCCCcCEEecccchhHHHHHHHHHhhcccchhhhhh
Confidence 9999999988887764 6899999999999975 78999998 9999999999999999999987 67899
Q ss_pred ccccCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccc
Q 012790 156 VTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGAL 235 (456)
Q Consensus 156 v~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl 235 (456)
+++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++|+|++++.++++++++| |.++++++||+
T Consensus 285 v~lElgG~~p~iV~~dAd~~~aa~~i~~~~~~~~GQ~C~a~~ri~v~~~i~d~~~~~~~~~~~~l~~g-~~~~~~~~gpl 363 (516)
T d1uzba_ 285 AYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVG-PAEENPDLGPV 363 (516)
T ss_dssp EEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBS-CGGGCCSBCCC
T ss_pred heeeccCccceeeecchhHHHHHHHHhhhhcccCCCcccccCccccccccccchhhHHHHHHHhcccC-CCcccCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999 56788999999
Q ss_pred cCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHH
Q 012790 236 CLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLA 315 (456)
Q Consensus 236 i~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~ 315 (456)
+++.++++++++|++++++|+.+ +||... +..|+|++|||+++++++|++++||+||||++|++|+|+||||+++
T Consensus 364 i~~~~~~~~~~~i~~a~~~Ga~v-~~g~~~----~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~d~eeai~~a 438 (516)
T d1uzba_ 364 VSAEQERKVLSYIEIGKNEGQLV-LGGKRL----EGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVA 438 (516)
T ss_dssp SCHHHHHHHHHHHHHHTTTSEEE-ECCSBC----SSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHCCCEE-ECCCcC----CCCCceECCEEEecCCCCchhhcCCCcCceEEEEEeCCHHHHHHHH
Confidence 99999999999999999888765 555532 4579999999999999999999999999999999999999999999
Q ss_pred hcCCCCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcch-HHHHhccceeeEEEE
Q 012790 316 NDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG-VEGLRACCLVKSVVE 390 (456)
Q Consensus 316 n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g-~~gl~~ft~~k~v~~ 390 (456)
|+++|||++||||+|.+.++++++++++|+|+||++..+...+.+||||+|.||+|+++| .++|++||+.|+|..
T Consensus 439 n~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~G~~~~l~~~~~~k~v~~ 514 (516)
T d1uzba_ 439 NDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAE 514 (516)
T ss_dssp HCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEEEEEEE
T ss_pred HCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEcCCCCCCCcCCCCCcCcccccCCcccchHHHHHHhCCeeeEEE
Confidence 999999999999999999999999999999999998776666779999999999999976 799999999999985
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=3.1e-82 Score=658.13 Aligned_cols=389 Identities=28% Similarity=0.463 Sum_probs=352.9
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhhhCCcccCCCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEE
Q 012790 3 DASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVI 82 (456)
Q Consensus 3 ~~~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~Vvl 82 (456)
++...|+..+++.++++++++.+|.+++.............+++++|+|||++|+|||||+.++++++++||++||+||+
T Consensus 56 ea~~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~vi~ 135 (446)
T d1ad3a_ 56 TSYYEEVAHVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVIL 135 (446)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHHSCEECCCCSTTTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccccccCCCCCCcceEEEeecceeEecccccccccccccccccccchhcccccc
Confidence 34457899999999999999999987765544333345667899999999999999999999999999999999999999
Q ss_pred ecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh-ccCEEEecCCHHHHHHHHHHhhccCCcccccCC
Q 012790 83 KVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 161 (456)
Q Consensus 83 Kps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~-~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElg 161 (456)
|||+.+|.++.++++++.+ ++|+++++++.|.+.....+.. .+|+|+||||+.+|+.|++.++++++|+++|||
T Consensus 136 Kps~~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fTGs~~~G~~i~~~aa~~~~~~~lElg 210 (446)
T d1ad3a_ 136 KPSEVSGHMADLLATLIPQ-----YMDQNLYLVVKGGVPETTELLKERFDHIMYTGSTAVGKIVMAAAAKHLTPVTLELG 210 (446)
T ss_dssp ECCSTTHHHHHHHHHHHHH-----HSCTTTEEECCCSHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECC
T ss_pred cccceeccccccccccccc-----cccccccccccccchhhhhhcccccCceEEECcHHHHHHHHHHHHhcCCcEEEECC
Confidence 9999999999998887753 4899999999998766666777 999999999999999999999999999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHH
Q 012790 162 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 241 (456)
Q Consensus 162 Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~ 241 (456)
||||+||++|||++.|++.|++++|.|+||.|++++|||||++++|+|++++.+.++.+ +|++.++++++||++++.++
T Consensus 211 G~np~iV~~dADl~~Aa~~iv~~~~~~~GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~-~g~~~~~~~~~gp~i~~~~~ 289 (446)
T d1ad3a_ 211 GKSPCYVDKDCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDF-YGEDAKQSRDYGRIINDRHF 289 (446)
T ss_dssp CCCEEEECSSSCHHHHHHHHHHHHHTTTTCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTSCCCSCHHHH
T ss_pred CcCcEEEecCCchHHHHHHHHHHHhcCCCCccccCCccccccchhHHHHHhhhhhhhee-ecccccccccccchhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999887 79999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCC
Q 012790 242 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 321 (456)
Q Consensus 242 ~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~g 321 (456)
+++.+++++ ++...|+. .+..++|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 290 ~~~~~~~~~-----a~~~~g~~-----~~~~~~~~~Ptil~~v~~~~~~~~eE~FgPVl~v~~~~~~~eai~~~n~~~~g 359 (446)
T d1ad3a_ 290 QRVKGLIDN-----QKVAHGGT-----WDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKP 359 (446)
T ss_dssp HHHHHTTTT-----SCEEECCC-----EETTTTEECCEEECSCCTTSGGGTSCCCSSEECEEECSSHHHHHHHHHTSCCC
T ss_pred hhhhccccc-----hhccccee-----ecCCCCCcCCEEEECCCCCCHHHhCcccCcceEEEEeccHHHHHHHHhCCCCC
Confidence 999888764 34444444 13567899999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEcccccccccCC
Q 012790 322 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKI 401 (456)
Q Consensus 322 L~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~~~~~~~~~~ 401 (456)
|++||||+|.+.++++++++++|.|+||++..+...+.+||||+|.||+|++||.+|+++||+.|+|++++++. ..
T Consensus 360 l~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~~~~~----~~ 435 (446)
T d1ad3a_ 360 LALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAYHGKKSFETFSHRRSCLVKSLLN----EE 435 (446)
T ss_dssp SEEEEECSCHHHHHHHHTTCCCSEEEESSSSGGGGCTTSCCCCCGGGEECCCSTHHHHHHTEEEEEEEECCCCC----CC
T ss_pred CEEEEEcCCHHHHHHHHHhCCEeEEEEeCCccCCCCCCCCccccccceeccchHHHHHHHHhceeEEEEccCCC----Cc
Confidence 99999999999999999999999999999877666678999999999999999999999999999999988752 44
Q ss_pred CCCCCCCCCc
Q 012790 402 PKPIQYPVAE 411 (456)
Q Consensus 402 ~~~~~~p~~~ 411 (456)
|..++|||+.
T Consensus 436 ~~~~~~pp~~ 445 (446)
T d1ad3a_ 436 AHKARYPPSP 445 (446)
T ss_dssp TTGGGSSSCC
T ss_pred cccccCCCCC
Confidence 5668899864
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.6e-82 Score=663.71 Aligned_cols=342 Identities=28% Similarity=0.497 Sum_probs=322.7
Q ss_pred cccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 012790 40 HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 119 (456)
Q Consensus 40 ~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~ 119 (456)
+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.+++++++ +++|+|++|+|+|+
T Consensus 129 ~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~a~ALaaGN~Vv~Kps~~~p~~~~~~~~l~~-----~~lP~gv~~~v~g~ 203 (474)
T d1wnda_ 129 GHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAK-----DIFPAGVVNILFGR 203 (474)
T ss_dssp TEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHT-----TTSCTTSEEECCCC
T ss_pred CcceEEEEecccceEEEeecchHhhhhhccHHHHHHhCCCEEEeCCCcCcHHHHHHHHHHH-----HhCCCCcEEEEeCC
Confidence 4567899999999999999999999999999999999999999999999999999988764 45999999999997
Q ss_pred h-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccC
Q 012790 120 A-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGA 196 (456)
Q Consensus 120 ~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~ 196 (456)
+ +.++.|++ +||+|.||||+++|+.|++.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|+++
T Consensus 204 ~~~~g~~L~~~p~i~~v~fTGS~~~G~~i~~~a~~~~k~~~lElgG~~p~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~ 283 (474)
T d1wnda_ 204 GKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAA 283 (474)
T ss_dssp TTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCC
T ss_pred cHHHHHHHHhCCCcCEEEeeCCHHHHHHHHHhhhcCCCeEEEEcCCCCceEEcCchhhhhhhhhhhhhcccCCCcccccc
Confidence 6 67999997 89999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccc
Q 012790 197 ERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 276 (456)
Q Consensus 197 ~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~ 276 (456)
+|+|||++++|+|+++|++.++++++|++.++++++||++++.+.+++.+++++++++|+..+.+|... ....|+|+
T Consensus 284 ~rv~V~~~i~d~~~~~l~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~ga~~v~~G~~~---~~~~g~~~ 360 (474)
T d1wnda_ 284 CRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEK---RKGNGYYY 360 (474)
T ss_dssp CEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSB---CSSSSCCB
T ss_pred cccccccccchhhhhhhHHHHHhhccCCcCCCCceecccccccccchHHHHHHHHHHCCCeEEEeCCcc---cCCCceEE
Confidence 999999999999999999999999999999999999999999999999999999999998655444322 24578999
Q ss_pred cceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCceeEEecCCHHHHHHHHHhcccCCeeecCCccccc
Q 012790 277 PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYM 356 (456)
Q Consensus 277 ~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~ 356 (456)
+|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||++...
T Consensus 361 ~Ptil~~~~~~~~~~~eE~FGPVl~v~~~~~~deai~~an~~~~GL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~-- 438 (474)
T d1wnda_ 361 APTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFML-- 438 (474)
T ss_dssp CCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCC--
T ss_pred eeeEeecccccccceeecccCCeEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCccEEEEeCCCCc--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999997654
Q ss_pred CcCCCccCCCCCCCCCcchHHHHhccceeeEEEEc
Q 012790 357 CQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 357 ~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~ 391 (456)
.+.+||||+|+||+|++||++|+++||+.|+|+++
T Consensus 439 ~~~~PfGG~k~SG~G~~~g~~gl~~~t~~k~v~i~ 473 (474)
T d1wnda_ 439 VSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVK 473 (474)
T ss_dssp CTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred cCCCCcccccccccCccCHHHHHHHcCCEEEEEEe
Confidence 35699999999999999999999999999999875
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Probab=100.00 E-value=2.1e-77 Score=630.21 Aligned_cols=376 Identities=26% Similarity=0.409 Sum_probs=339.2
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhhCCcccCC-CcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEE
Q 012790 4 ASLGEIMTTCEKITWLLSEGEKWLKPEYRSS-GRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVI 82 (456)
Q Consensus 4 ~~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~Vvl 82 (456)
.+.+|+..+++.++|++..++++........ .........+++|+|+|||++|+|||||+.++++++++||++||+||+
T Consensus 109 ~a~~Ev~~~i~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGn~Vi~ 188 (499)
T d1ky8a_ 109 AAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVV 188 (499)
T ss_dssp HHHHHHHHHHHHHHGGGGGGTTTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHhhhhhcccccccchhhhhhhhhhceeccccccccccccceeeeeccccccccccccccchhhhhcchhhhcccccccc
Confidence 3568999999999999999887654332211 111234567899999999999999999999999999999999999999
Q ss_pred ecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccC
Q 012790 83 KVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 160 (456)
Q Consensus 83 Kps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lEl 160 (456)
|||+.+|.++..+++++. ++|+|+++++++.|+++.+..|++ .++.|.||||+.+|+.+++.++ .+|+++||
T Consensus 189 Kps~~~~~~~~~l~~~~~----~~~~p~~~~~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~i~~~~~--~~~~~lEl 262 (499)
T d1ky8a_ 189 KPSISDPLPAAMAVKALL----DAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG--VKQYVMEL 262 (499)
T ss_dssp ECCTTSCHHHHHHHHHHH----HHTCCTTSEEECCCCGGGGHHHHHCTTCCEEEEESCHHHHHHHHHHHC--SSEEEEEC
T ss_pred cccccchhhhhhhccccc----cccccceeeecccCChHHHHHHhhccceeEEEeecccccceEEeeccc--ccceEEec
Confidence 999999999988887765 678999999999998888888887 9999999999999999998876 58999999
Q ss_pred CCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHH
Q 012790 161 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 240 (456)
Q Consensus 161 gGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~ 240 (456)
|||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++|+|.++++++||++++++
T Consensus 263 gG~np~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~ 342 (499)
T d1ky8a_ 263 GGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSA 342 (499)
T ss_dssp CCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHH
T ss_pred CCCCeEEEcCCcChhhhhhhhhhhhhccCcccccccccccccchhHHHHHHHHHHHHHhCccCCCCCccccccccchHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceee---ecCCCCCccchhccccCceeEeeeCCHHHHHHHHhc
Q 012790 241 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI---VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAND 317 (456)
Q Consensus 241 ~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl---~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~ 317 (456)
++++++++++|+++|++++.||... ...++.++++ .++++||++++||+||||++|++|+|.||||+++|+
T Consensus 343 ~~~~~~~i~~a~~~ga~v~~~~~~~------~~~~~~~~~~~~~~~~~~d~~~~~eE~FGPvl~v~~~~~~~eai~~~n~ 416 (499)
T d1ky8a_ 343 VDEMMAAIEDAVEKGGRVLAGGRRL------GPTYVQPTLVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANG 416 (499)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCCEE------ETTEECCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCEEeeeeccc------cccccccccccccccCCCCChhhhccccCceEEEEEcCCHHHHHHHHhC
Confidence 9999999999999999999998732 2233333333 455689999999999999999999999999999999
Q ss_pred CCCCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEcc
Q 012790 318 SRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 318 ~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~~ 392 (456)
++|||++||||+|.+.++++++++++|+|+||++..+. .+.+||||+|.||+|++||.+|+++||+.|+|+++.
T Consensus 417 ~~~gLt~sv~s~d~~~~~~~~~~l~~G~v~iN~~~~~~-~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~i~~~~ 490 (499)
T d1ky8a_ 417 RPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHG-IGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVFNY 490 (499)
T ss_dssp SSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCT-TSSSCBCCEETTEESCBSTTTTHHHHEEEEEEEEEC
T ss_pred CCCCCeEEEEcCCHHHHHHHHHhCCEeEEEEeCCCCCC-CCCCCccccccCcCCCCCHHHHHHHhhCEEEEEEcC
Confidence 99999999999999999999999999999999987654 466999999999999999999999999999999853
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Probab=100.00 E-value=8e-73 Score=591.80 Aligned_cols=373 Identities=32% Similarity=0.470 Sum_probs=336.4
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhhCCcccC--CCcccccccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEE
Q 012790 4 ASLGEIMTTCEKITWLLSEGEKWLKPEYRS--SGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIV 81 (456)
Q Consensus 4 ~~~~Ei~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~Vv 81 (456)
++..|+...++.++++......+....... .+....+...+++++|+|||++|+|||||+...+.++++||++||+||
T Consensus 95 ~a~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~n~P~~~~~~~~~~aL~aGN~vV 174 (474)
T d1euha_ 95 SAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIA 174 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEE
T ss_pred hhccccchhHHHHHHHHHHHhhhhcccccccccccccCCceeEEEeeceeEEEEeccccccchhhhhhchhhhhccccce
Confidence 356788888888999888776554322111 112223455689999999999999999999999999999999999999
Q ss_pred EecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccc
Q 012790 82 IKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTL 158 (456)
Q Consensus 82 lKps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~l 158 (456)
+|||+.+|.++.++++++. ++|+|+|++|+|+|++ +.++.|++ +++.|+||||+++|+.+++.++ .+|+++
T Consensus 175 ~Kps~~~~~~~~~l~~~~~----eaglP~gv~~~i~g~~~~~~~~L~~~~~v~~v~ftGs~~~~~~i~~~a~--~k~~~~ 248 (474)
T d1euha_ 175 FKPPTQGSISGLLLAEAFA----EAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPIML 248 (474)
T ss_dssp EECCSTTHHHHHHHHHHHH----HHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTT--TSCEEE
T ss_pred ecccccchHHHHHHHHHHH----HhCCCcCeEEEccCChHHHHHHHHhCCCccEEEecCccccccchhhhcc--cceEEE
Confidence 9999999999998888764 6899999999999985 78899987 8999999999999999999876 689999
Q ss_pred cCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCH
Q 012790 159 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLL 238 (456)
Q Consensus 159 ElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~ 238 (456)
|+||+||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|++.++++...++.|++.+. .+++|+++.
T Consensus 249 e~gG~~~~iV~~dAdl~~aa~~i~~~~~~~~Gq~C~a~~~i~v~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~ 327 (474)
T d1euha_ 249 ELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDD-ADITPLIDT 327 (474)
T ss_dssp ECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCGGGT-CSBCCCSCH
T ss_pred ecCCcceEEEECCCchhhHHHHHHHHHhhCCCCccccccccchhhhhhhhhhHhhhhhhhhccccCcccc-cccccccch
Confidence 9999999999999999999999999999999999999999999999999999999999999999998765 468999999
Q ss_pred HHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcC
Q 012790 239 EHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDS 318 (456)
Q Consensus 239 ~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~ 318 (456)
.+.+++.+.+.++...++..+.++. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|++
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~ 400 (474)
T d1euha_ 328 KSADYVEGLINDANDKGATALTEIK-------REGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKS 400 (474)
T ss_dssp HHHHHHHHHHHHHHHTTCEECSCCC-------EETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhhhcccccccccCC-------CCCCCcCCEEEecCCCcchhhhcccCCcEEEEEEeCCHHHHHHHHHCC
Confidence 9999999999999888887765443 578999999999999999999999999999999999999999999999
Q ss_pred CCCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCcCCCccCCCCCCCCCcchHHHHhccceeeEEEEc
Q 012790 319 RYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 391 (456)
Q Consensus 319 ~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~G~~~g~~gl~~ft~~k~v~~~ 391 (456)
+|||++||||+|.+.++++++++++|+|+||++..+. .+.+||||+|+||+|++||++|+++||+.|+|+++
T Consensus 401 ~~glta~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~-~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 472 (474)
T d1euha_ 401 EYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRG-TDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFD 472 (474)
T ss_dssp SEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCC-STTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEE
T ss_pred CCCCeEEEEeCCHHHHHHHHHhCCEEEEEEECCCCCC-CCCCCccccccCccCccCHHHHHHHhCcEEEEEEe
Confidence 9999999999999999999999999999999975544 45699999999999999999999999999999875
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Probab=100.00 E-value=3.7e-68 Score=559.56 Aligned_cols=365 Identities=16% Similarity=0.205 Sum_probs=303.7
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhCCccc-----CCCcccccccceEEEecceEEEEEcCCccchHhh--HHHHHHHHhcC
Q 012790 5 SLGEIMTTCEKITWLLSEGEKWLKPEYR-----SSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI--FNPMLAAVFSG 77 (456)
Q Consensus 5 ~~~Ei~~~~~~i~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~--~~~~~~ALaaG 77 (456)
+.+|+..+++.++|+++.++++...+.. +..........+++++|+|||++|+|||||+.+. ..++++||++|
T Consensus 83 a~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwNfPl~~~~~~~~~a~ALaaG 162 (504)
T d1ez0a_ 83 LTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAG 162 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCcccceeEEEecCceEEEEecccccchhhhhhHHHHHHHHHh
Confidence 4679999999999999998876544321 1111122345678899999999999999998644 46999999999
Q ss_pred CeEEEecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-HhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCC
Q 012790 78 NGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLT 154 (456)
Q Consensus 78 N~VvlKps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~ 154 (456)
|+||+|||+.+|.++.++.+++.++|.++|+|+|++|+|+|++ +.++.|++ +||+|+||||+.+|++|++.++++++
T Consensus 163 N~VVlKPs~~tp~ta~~~~~li~~a~~~aGlP~Gv~~~v~g~~~~~g~~L~~~p~v~~V~FTGS~~~g~~i~~~aa~~~~ 242 (504)
T d1ez0a_ 163 CPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPE 242 (504)
T ss_dssp CCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSS
T ss_pred ccceecCcccccchhhhhhhHHHHHhhhhccccCceecccccccccccccccccccceeeeccchHHHHHHHhhhhcccc
Confidence 9999999999999999999999999999999999999999975 77899988 99999999999999999999999998
Q ss_pred cccc--cCCCcceEEEcCCCCHHHHH--HHHHHHHhhCCCCCcccCCeEEEehhhH-HHHHHHHHHHHhccccCCCCCCC
Q 012790 155 PVTL--ELGGKDAFIVCDDVDVPHVA--QIAVRAALQSSGQNCAGAERFYVHRDIY-ALFVSQVAKIVKSVSAGPPLAGK 229 (456)
Q Consensus 155 pv~l--ElgGk~p~iV~~daDl~~aa--~~i~~~~~~n~GQ~C~a~~~v~V~~~i~-d~f~~~l~~~~~~~~~g~~~~~~ 229 (456)
|+.+ |||||||+||++|||++.|+ +.+++++|.|+||.|++++|+||+++.+ +.|++.+++.++.. +++
T Consensus 243 ~~~l~~ElGGknp~iV~~dAd~~~Aa~~~~~~~~~~~~~GQ~C~a~~rv~v~~~~~~~~~~~~~~~~~~~~------~~~ 316 (504)
T d1ez0a_ 243 PIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQ------SPS 316 (504)
T ss_dssp CCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHC------CCB
T ss_pred cccccccccccccccccccccHHHHhhhhccccchhhccCccccccccccchhhhhHHHHhhhhhhhhhhc------ccc
Confidence 8766 99999999999999999874 4789999999999999999999877654 56777777666542 346
Q ss_pred CccccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeee---cCCCCCccchhccccCceeEeeeC
Q 012790 230 YDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIV---NVNHTMKLMQEEAFGPIMPIMKFN 306 (456)
Q Consensus 230 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~---~v~~~~~i~~eE~FGPvl~v~~~~ 306 (456)
+.+||+++..+++++ ++.+.++|+++..||.. +.+..|+++. ++..++++++||+||||++|++|+
T Consensus 317 ~~~gp~i~~~~~~~v---i~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~eE~FGPvl~i~~~~ 385 (504)
T d1ez0a_ 317 TLLTPGIRDSYQSQV---VSRGSDDGIDVTFSQAE--------SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCE 385 (504)
T ss_dssp CCSSHHHHHHHHHHH---HHHHTSTTEEEEECCCC--------TTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEES
T ss_pred cccccchhhhhhhhh---hhhhhhhhhhccccccc--------ccccCCccccccccccccchhhcccccCCeeeeeecC
Confidence 789999999988775 56666778888887762 3344555544 334578899999999999999999
Q ss_pred CHHHHHHHHhcCCCCceeEEecC--CHHHHHHHHHhcc--cCCeeecCCcccc-----cCcCCCccCCCCCCCCCcchHH
Q 012790 307 TDEEVVKLANDSRYGLGCAVFSG--SQHRAREIAAQIQ--CGVAAINDFASNY-----MCQSLPFGGVKDSGFGRFAGVE 377 (456)
Q Consensus 307 ~~~eai~~~n~~~~gL~~~vft~--d~~~~~~~~~~l~--~G~v~iN~~~~~~-----~~~~~PfGG~~~SG~G~~~g~~ 377 (456)
|+||||+++|+++|||++||||+ |..++.+++++|+ +|+|+||++++.. .....||||.+.||.| ..|.+
T Consensus 386 ~~~eai~~an~~~~gL~a~I~t~d~d~~~a~~~~~~l~~~aG~v~iN~~~tG~~v~~~~~~ggpf~g~~~sg~~-~~G~~ 464 (504)
T d1ez0a_ 386 NVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSAST-SVGAE 464 (504)
T ss_dssp SHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCC-SSSGG
T ss_pred CHHHHHHHHHCCCCCceEEEEecchhHHHHHHHHHHHhCCccEEEEcCCcccceecCcCCCCCCCCCcCCCCCC-cchHH
Confidence 99999999999999999999996 5568899999996 7999999975432 1223489999999955 46999
Q ss_pred HHhccceeeE
Q 012790 378 GLRACCLVKS 387 (456)
Q Consensus 378 gl~~ft~~k~ 387 (456)
++++|+++.+
T Consensus 465 ~i~~f~r~v~ 474 (504)
T d1ez0a_ 465 AIHRWLRPVA 474 (504)
T ss_dssp GGGGGEEEEE
T ss_pred HHHHHhchhh
Confidence 9999975543
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=4.7e-57 Score=464.24 Aligned_cols=303 Identities=18% Similarity=0.197 Sum_probs=250.3
Q ss_pred ccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh
Q 012790 41 KKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA 120 (456)
Q Consensus 41 ~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~g~~ 120 (456)
....+.++|+||++++.|||||+.++++++++||++||+||+|||+.+|.++..+++++.+++.+.|+|.++++.+.+..
T Consensus 102 ~~~~~~~~~~gv~~~~~p~n~p~~~~~~~~~~alaaGN~vvlKps~~tp~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~ 181 (414)
T d1o20a_ 102 DGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIENTD 181 (414)
T ss_dssp TSCEEEEEEEECCCEEEECCSCTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHHTTSSSCGGGEEECCCCC
T ss_pred cccceeecccccccccccccCcHHHhhhccchheecccchhcccccccccccchhhhHHHhhhhhccccccccccccccc
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999998887654
Q ss_pred -HhHHHHHhccCEEEecCCHHHHHHHHHHhhccCCcccccCCCcc-eEEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCe
Q 012790 121 -ETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD-AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAER 198 (456)
Q Consensus 121 -~~~~~L~~~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgGk~-p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~ 198 (456)
+....+. ..+.+.||||+..++.+++.++++++++++|+||+| |+||++|||++.|++.+++++|.| ||.|++++|
T Consensus 182 ~~~~~~~~-~~~~~~~~~~~~~~~~v~~~a~~~~~~~~le~gGgn~~viv~~dAd~~~A~~~~~~~~~~~-gq~C~a~~r 259 (414)
T d1o20a_ 182 RSLVLEMI-RLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADLKKAVPVIINAKTQR-PGTCNAAEK 259 (414)
T ss_dssp THHHHHHT-TCTTTCSEEEECSCHHHHHHHHHHCSSCBCCCCCCCEEEEECTTSCHHHHHHHHHHHHHSC-TTSTTSEEE
T ss_pred hhhhhhcc-cccccCeEEEcccHHHHHHHhhhccccceecccCCCCCeecccccchhhhhhHHHhhhhcC-Ccccccccc
Confidence 4444444 455666777777778888888888999999999866 578889999999999999999877 999999999
Q ss_pred EEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccc
Q 012790 199 FYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPP 278 (456)
Q Consensus 199 v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~P 278 (456)
++||+++||+|+++|.+..++..++.+.+ +. ...+.+
T Consensus 260 ~~V~~~i~d~f~~~l~~~~~~~~~~~~~~----------~~---------------------------------~~~~~~ 296 (414)
T d1o20a_ 260 LLVHEKIAKEFLPVIVEELRKHGVEVRGC----------EK---------------------------------TREIVP 296 (414)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHTTCEEEEC----------HH---------------------------------HHHHST
T ss_pred cchhHHHHHHHHHHHhHHHHHcCCccccc----------hh---------------------------------hhhhcc
Confidence 99999999999999999887765433221 10 011112
Q ss_pred eeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCceeEEecCCHHHHHHHHHhcccCCeeecCCcccccCc
Q 012790 279 TVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQ 358 (456)
Q Consensus 279 tvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~ 358 (456)
.+... ....++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||+.+.+...
T Consensus 297 ~~~~~---~~~~~~~E~FgPvl~v~~~~~~dEAI~~aN~~~yGLsa~I~T~d~~~a~~~~~~i~~G~V~IN~~~~~~~~- 372 (414)
T d1o20a_ 297 DVVPA---TEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRFTDG- 372 (414)
T ss_dssp TSEEC---CGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGCST-
T ss_pred cceec---ccccCCceeeeeEEEEEEeCCHHHHHHHHhcCCCCCcEEEEeCCHHHHHHHHHhCCeeEEEEeCCCcCCCC-
Confidence 22211 22457899999999999999999999999999999999999999999999999999999999987544332
Q ss_pred CCCccCCCCCCC--CCcc--hHHHHhccceeeEEEEccc
Q 012790 359 SLPFGGVKDSGF--GRFA--GVEGLRACCLVKSVVEDRW 393 (456)
Q Consensus 359 ~~PfGG~~~SG~--G~~~--g~~gl~~ft~~k~v~~~~~ 393 (456)
.|||+.+.||+ |+.| |++|+++||+.|+|+.+.+
T Consensus 373 -~~~g~g~~~G~~~~~~~~~G~~gl~~~t~~K~vv~~~~ 410 (414)
T d1o20a_ 373 -GQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGEY 410 (414)
T ss_dssp -TTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECSS
T ss_pred -CCCCCCCceeccCCCCCCCchhHHHHhCeEEEEEECCC
Confidence 45555555554 4544 8999999999999988654
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=3.6e-46 Score=383.93 Aligned_cols=315 Identities=16% Similarity=0.133 Sum_probs=225.1
Q ss_pred ccceEEEecceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHH----HHHHHcCCCCCcEEEE
Q 012790 41 KKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQ----AALAAVGAPENLVDVI 116 (456)
Q Consensus 41 ~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~l~~----~~l~~aGlp~g~v~vv 116 (456)
...+..+.|+||+++| |||+| ..++...+.||++||+||+||++.++.|+..+.++++ +++.++|+|+++++++
T Consensus 107 l~~~~~~~P~GVigiI-~e~~P-~vt~~~~~lalksGNavIlk~~~~a~~s~~~l~~~~~~al~~a~~~aGlP~~~i~~v 184 (436)
T d1vlua_ 107 LTLYQVTAPVGVLLVI-FESRP-EVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGSVQLI 184 (436)
T ss_dssp EEEEEEEEECCEEEEE-ESSCT-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHHHHHHHCCCTTSEEEC
T ss_pred ceEEEeeeeeeeeecc-ccccc-hhhhhhhhcccccCCcceecCCcccccCHHHHHHHHHHhhhhhccccCCCCceEEEe
Confidence 3556788999999998 67778 6677888999999999999999999999998888875 5567789999999999
Q ss_pred eCChHhHHHHHh--ccCEEEecCCHHHHHHHHHHhhccCCcccccCCCcceEEEcCCCCHHHHHHHHHHHHhhCCCCCcc
Q 012790 117 TGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCA 194 (456)
Q Consensus 117 ~g~~~~~~~L~~--~vd~i~fTGS~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~ 194 (456)
++..++++.|.. ++|.|.||||...++.+.+.+. +|++.|+||++|+||++|||++.|++.++.++|.++|| |+
T Consensus 185 ~~~~~v~~~l~~~~~Id~ii~tGg~~lv~~v~~~~~---~pvi~~~~G~~~~~Vd~~ADl~~A~~~i~~ak~~~~g~-C~ 260 (436)
T d1vlua_ 185 ETRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTTK---IPVLGHADGICSIYLDEDADLIKAKRISLDAKTNYPAG-CN 260 (436)
T ss_dssp CCC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTCC---SCBTTBCSCCEEEEECTTCCHHHHHHHHHHTTCC-----CC
T ss_pred cchhHHHHHhccCCCCceEEEecCCceeeeeecccc---ceEEEecCCccceeecccccHHHHHHHHHHHhccCCCc-cc
Confidence 987777777776 8999999999999888877664 69999999999999999999999999999999999998 88
Q ss_pred cCCeEEEehhhHHHHHHHHHHHHhccccCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCc
Q 012790 195 GAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ 274 (456)
Q Consensus 195 a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~ 274 (456)
+.++++||+++++.|...+....+. |-. +. ..+ .+.....+...+. |. ..+.
T Consensus 261 a~e~llV~e~ia~~~~~~~~~~~~~---gv~------l~--~~~----~~~~~~~~~~~~~------~~-------~~~~ 312 (436)
T d1vlua_ 261 AMETLLINPKFSKWWEVLENLTLEG---GVT------IH--ATK----DLKTAYFDKLNEL------GK-------LTEA 312 (436)
T ss_dssp CCEEEEECTTSTTHHHHHHHHHHHH---CCC------BE--ECH----HHHHHHHHHHHHH------TC-------CCHH
T ss_pred cccceeecHhhhhhhhhhHHHHHhC---CcE------EE--eCH----HHHHHhhhhhhhc------cc-------cccc
Confidence 9999999999998886555444432 110 00 111 1222222221111 11 1233
Q ss_pred cccceeeecCCCCCccchhccccCceeEeeeCCHHHHHHHHhcCCCCceeEEecCCHHHHHHHHHhcccCCeeecCCccc
Q 012790 275 YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASN 354 (456)
Q Consensus 275 ~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~ 354 (456)
...|++....+.| +.+|.|+|+|+|++++|+||||+++|+.++||+++|||+|.+.+++|++++++|.|+||....+
T Consensus 313 ~~~~~~~~~~~~d---~~~E~l~pvl~v~~v~~~eEAI~~in~~g~ghta~I~T~d~~~a~~F~~~vda~~V~vNasTrf 389 (436)
T d1vlua_ 313 IQCKTVDADEEQD---FDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWNASTRF 389 (436)
T ss_dssp HHTTBC----------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHHHHHHHCCCSEEEESSCGGG
T ss_pred ccccccCCCcccc---hhhhhhCcceeEEEECCHHHHHHHHHHhCCCCceEEEECCHHHHHHHHHhCCceEEEEcCCCcc
Confidence 3445554443333 6899999999999999999999999999999999999999999999999999999999997655
Q ss_pred ccCcCCCccCC-CCC-CCCCcchHHHHhccceeeEEEEcc
Q 012790 355 YMCQSLPFGGV-KDS-GFGRFAGVEGLRACCLVKSVVEDR 392 (456)
Q Consensus 355 ~~~~~~PfGG~-~~S-G~G~~~g~~gl~~ft~~k~v~~~~ 392 (456)
.....+.||+- |-| +-...+|+.|++++|..|.++...
T Consensus 390 ~Dg~~~g~g~e~Gist~k~h~rGp~gl~~ltt~k~~~~g~ 429 (436)
T d1vlua_ 390 ADGFRYGFGAEVGISTSKIHARGPVGLDGLVSYQYQIRGD 429 (436)
T ss_dssp CC----------------------CCSGGGEEEEEEEECS
T ss_pred CCCCcccCcceeeEecCCCCCCCCcChHHhceEEEEEECC
Confidence 43322344432 222 223457999999999999998754
|
| >d1k75a_ c.82.1.2 (A:) L-histidinol dehydrogenase HisD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: L-histidinol dehydrogenase HisD domain: L-histidinol dehydrogenase HisD species: Escherichia coli [TaxId: 562]
Probab=96.95 E-value=0.19 Score=48.49 Aligned_cols=281 Identities=15% Similarity=0.128 Sum_probs=161.5
Q ss_pred HHHHHHHHHhhhhhhCCcccCCCcc---cccccceEEEecceEEEEEcCCc---cchHhhHHHHHHHHhcCCeE--EEec
Q 012790 13 CEKITWLLSEGEKWLKPEYRSSGRS---MIHKKAKVEFHPLGVVGAIVSWN---YPFHNIFNPMLAAVFSGNGI--VIKV 84 (456)
Q Consensus 13 ~~~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~vi~p~N---~P~~~~~~~~~~ALaaGN~V--vlKp 84 (456)
.+.|+..+++.+++-+.|.. .+.. ..+.....++.|+--|++..|.- || +++++..+||-.||+.= +.-|
T Consensus 82 ~~AI~~A~~rI~~FH~~Q~~-~~~~~e~~~Gv~~g~~~~PI~~VGlYVPGG~A~yp-SsvLM~aiPAkvAGV~~Ivv~tP 159 (431)
T d1k75a_ 82 KQAMAVAVKNIETFHTAQKL-PPVDVETQPGVRCQQVTRPVASVGLYIPGGSAPLF-STVLMLATPASIAGCKKVVLCSP 159 (431)
T ss_dssp HHHHHHHHHHHHHHHHTTCC-CCEEEEEETTEEEEEEEEECSEEEEECCCSSSCCH-HHHHHHHHHHHHHTCSEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHhhcC-CCceeeccCCceeeeeeeehhhheeeccCCCccch-HHHHHHHHHHHhcCCCceeEEeC
Confidence 44555666666655443332 2211 12345567889999999999975 55 45677788999999854 4456
Q ss_pred CCCChhHHHHHHHHHHHHHHHcCCCCCcEEEEe-CChHhHHHHHh------ccCEEEecCCHHHHHHHHHHhhccCCccc
Q 012790 85 SENASWSGCFYFRIIQAALAAVGAPENLVDVIT-GFAETGEALVS------SVDKIIFVGSPGVGRMIMRNASKTLTPVT 157 (456)
Q Consensus 85 s~~~p~~~~~l~~l~~~~l~~aGlp~g~v~vv~-g~~~~~~~L~~------~vd~i~fTGS~~~g~~v~~~aa~~~~pv~ 157 (456)
+...|.+ |+ +...+|..+ +.. |+...-.+|.- +||+|+=.|+.=+..+=.+-.++. ..|-
T Consensus 160 p~~~~~~---l~-----aa~~~Gv~~----iy~~GGaqAIAAlAyGT~ti~~VdkI~GPGN~yV~~AK~~v~g~~-~~vg 226 (431)
T d1k75a_ 160 PPIADEI---LY-----AAQLCGVQD----VFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRL-DGAA 226 (431)
T ss_dssp SSCCHHH---HH-----HHHHTTCCE----EEECCHHHHHHHHHHCCSSSCCCSEEECCCSHHHHHHHHHHHHST-TSCE
T ss_pred CCCcchH---HH-----HHHHcCccc----eEecCChHHHHHHhhccCcccccceeecCCchhhhhhHHhhcccC-Cccc
Confidence 5555532 21 123466654 222 54455555642 899999999887644211122211 0121
Q ss_pred c-cCCCcce--EEEcCCCCHHHHHHHHHHHHhhCCCCCcccCCeEEEe--hhhHHHHHHHHHHHHhccccCCCCCCCCcc
Q 012790 158 L-ELGGKDA--FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVH--RDIYALFVSQVAKIVKSVSAGPPLAGKYDM 232 (456)
Q Consensus 158 l-ElgGk~p--~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~V~--~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~ 232 (456)
. -+-|.+= +|-++++|.+.+|..++..+=+...- +.++|. ++..+++.+.+.+.++.+. .
T Consensus 227 ID~~aGPSEv~viAD~~a~p~~iAaDllaQAEH~~~a-----~~ilvt~~~~l~~~v~~~i~~~l~~l~----r------ 291 (431)
T d1k75a_ 227 IDMPAGPSEVLVIADSGATPDFVASDLLSQAEHGPDS-----QVILLTPAADMARRVAEAVERQLAELP----R------ 291 (431)
T ss_dssp ESCCCCCCEEEEEECTTSCHHHHHHHHHHHHTTCTTC-----EEEEEESCHHHHHHHHHHHHHHHHTCS----S------
T ss_pred cccccCCceEEEEecCCCCHHHHHHHHHhccCCcccc-----eeEEEeccHHHHHHHHHHHHHHhhhch----H------
Confidence 1 1235554 34445689999888887766554432 334554 3455666555555554431 0
Q ss_pred ccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCccccceeeecCCCCCccchhccccCceeEeeeCCHHHHH
Q 012790 233 GALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVV 312 (456)
Q Consensus 233 gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai 312 (456)
.+..+... +-. .++.++|++||+
T Consensus 292 ------------~~i~~~s~-----------------------------------------~~~----~ii~v~~~~ea~ 314 (431)
T d1k75a_ 292 ------------AETARQAL-----------------------------------------NAS----RLIVTKDLAQCV 314 (431)
T ss_dssp ------------CHHHHHHH-----------------------------------------TTC----EEEECSSHHHHH
T ss_pred ------------HHHHHhhh-----------------------------------------ccc----eEEEecCHHHHH
Confidence 00111111 001 134579999999
Q ss_pred HHHhcCCCCceeEEecCCHHHHHHHHHhc-ccCCeeecCCcccc-------cCcCCCccCCCCCCCCCcchHHHHhccce
Q 012790 313 KLANDSRYGLGCAVFSGSQHRAREIAAQI-QCGVAAINDFASNY-------MCQSLPFGGVKDSGFGRFAGVEGLRACCL 384 (456)
Q Consensus 313 ~~~n~~~~gL~~~vft~d~~~~~~~~~~l-~~G~v~iN~~~~~~-------~~~~~PfGG~~~SG~G~~~g~~gl~~ft~ 384 (456)
+++|..- +=...|.++|.. ++..++ .+|.|++..+.... .++-+|- +|..|+.|.-+...|..
T Consensus 315 ~~~N~~A-PEHL~l~~~~~~---~~~~~i~nAGsIflG~~sp~a~GDY~aGpnHvLPT-----~G~Ar~~sgLsv~dF~k 385 (431)
T d1k75a_ 315 EISNQYG-PEHLIIQTRNAR---ELVDSITSAGSVFLGDWSPESAGDYASGTNHVLPT-----YGYTATCSSLGLADFQK 385 (431)
T ss_dssp HHHHHHC-CSEEEEESTTHH---HHGGGCCCCSEEEESTTCCHHHHHHTSSSCCCCCC-----TTGGGTCCCCCGGGGEE
T ss_pred HHHHhhh-HHHHHHHhcCHH---HHHhhhhhcchhhcCCCCcchhhccccCCCccCCC-----CCceeecCCCCHHHeee
Confidence 9999842 224778888765 466666 58999998752211 1233444 46677777777888876
Q ss_pred eeEEE
Q 012790 385 VKSVV 389 (456)
Q Consensus 385 ~k~v~ 389 (456)
.-++.
T Consensus 386 ~~s~~ 390 (431)
T d1k75a_ 386 RMTVQ 390 (431)
T ss_dssp EEEEE
T ss_pred eeeEE
Confidence 66554
|