Citrus Sinensis ID: 012798
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 456 | ||||||
| 359494235 | 446 | PREDICTED: vacuolar cation/proton exchan | 0.942 | 0.964 | 0.768 | 0.0 | |
| 380039664 | 449 | CAX2 transporter [Sedum alfredii] | 0.969 | 0.984 | 0.742 | 0.0 | |
| 380039662 | 449 | CAX2 transporter [Sedum alfredii] | 0.969 | 0.984 | 0.748 | 0.0 | |
| 359485864 | 450 | PREDICTED: vacuolar cation/proton exchan | 0.960 | 0.973 | 0.748 | 0.0 | |
| 30696001 | 441 | vacuolar cation/proton exchanger 5 [Arab | 0.942 | 0.975 | 0.732 | 0.0 | |
| 224056879 | 398 | Ca2+ antiporter/cation exchanger [Populu | 0.870 | 0.997 | 0.796 | 0.0 | |
| 297853280 | 441 | predicted protein [Arabidopsis lyrata su | 0.942 | 0.975 | 0.730 | 0.0 | |
| 356524415 | 428 | PREDICTED: vacuolar cation/proton exchan | 0.927 | 0.988 | 0.741 | 0.0 | |
| 255567156 | 448 | Vacuolar cation/proton exchanger, putati | 0.940 | 0.957 | 0.722 | 1e-180 | |
| 297829868 | 441 | hypothetical protein ARALYDRAFT_897557 [ | 0.940 | 0.972 | 0.713 | 1e-179 |
| >gi|359494235|ref|XP_002269027.2| PREDICTED: vacuolar cation/proton exchanger 5-like [Vitis vinifera] gi|296089995|emb|CBI39814.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 673 bits (1736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/436 (76%), Positives = 377/436 (86%), Gaps = 6/436 (1%)
Query: 13 NLEMGSLDDRSMHEFEDESLFTPEAESEKIQRVHGLQNGSVSGDFPSSGNKILQNSVCRS 72
N+EMGSL++RS HE EDESL +P +K H Q GS D+ +K+L N+V S
Sbjct: 11 NMEMGSLEERSNHELEDESLISPAKIGQKTNSFHAPQLGSSCRDWRIWSSKLLGNAVFMS 70
Query: 73 IKTVVFSNKLNLLMPFGPLAIMVHNLTGHKGWVFFLSLLGITPLAERLGYATEQLTFFTG 132
I+ VVFS+KLNLLMPFGPLA++VH L+ H GWVFFL+LLGITPLAERLGYATEQL+F+TG
Sbjct: 71 IRVVVFSSKLNLLMPFGPLAVLVHGLSDHNGWVFFLTLLGITPLAERLGYATEQLSFYTG 130
Query: 133 ATVGGLLNATFGNATELIISIYALKSGMIRVVQLSLLGSILSNMLLVLGCAFFCGGLICC 192
TVGGLLNATFGNATELIISIYALKSGMIRVVQ SLLGSILSNMLLVLGCAFFCGG++
Sbjct: 131 DTVGGLLNATFGNATELIISIYALKSGMIRVVQQSLLGSILSNMLLVLGCAFFCGGIVFN 190
Query: 193 KKEQVFNKASAVVNSGLLLMAVMGLVFPAVLHYTHTEVHFGKSELALSRFSSCIMLVAYG 252
K+QVFNKA AV+NSGLLLMAVMGL+FPAVLH+THTEVHFG+SELALSRFSSCIML+AY
Sbjct: 191 NKQQVFNKAIAVLNSGLLLMAVMGLLFPAVLHFTHTEVHFGRSELALSRFSSCIMLLAYA 250
Query: 253 AYLFFQLRGQTELYVPLSEDENQTGNDADHGGNHDDNEAPEISKWESLIWLAIMTAWISI 312
YL FQL+ Q +LY+ ++E G + G DD+E PEISKWES+IWL+I+TAWI+I
Sbjct: 251 GYLVFQLKSQKDLYMSIAEG----GTLPEEGS--DDDEGPEISKWESVIWLSILTAWIAI 304
Query: 313 LSQYVVDAIEGASASWNIPISFISVILLPIVGNAAEHASAIMFAMKDKLDISLGVAIGSS 372
LS+Y+VDAIEGAS +W +P+SFISVILLPIVGNAAEHASAIMFAMKDKLDISLGVAIGSS
Sbjct: 305 LSEYLVDAIEGASIAWKMPVSFISVILLPIVGNAAEHASAIMFAMKDKLDISLGVAIGSS 364
Query: 373 TQISMFGIPFCVVIGWIMGRPMDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLMLIL 432
TQISMF IPFCVVIGWIMG PMDLNFQLFETATLFITV+VVAF LQEGTSNYFKGLMLIL
Sbjct: 365 TQISMFAIPFCVVIGWIMGCPMDLNFQLFETATLFITVLVVAFLLQEGTSNYFKGLMLIL 424
Query: 433 CYLIVAASFFVHEDPT 448
CYLIVAASFFVH DPT
Sbjct: 425 CYLIVAASFFVHVDPT 440
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|380039664|gb|AFD32370.1| CAX2 transporter [Sedum alfredii] | Back alignment and taxonomy information |
|---|
| >gi|380039662|gb|AFD32369.1| CAX2 transporter [Sedum alfredii] | Back alignment and taxonomy information |
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| >gi|359485864|ref|XP_002266383.2| PREDICTED: vacuolar cation/proton exchanger 5-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|30696001|ref|NP_175969.2| vacuolar cation/proton exchanger 5 [Arabidopsis thaliana] gi|79320047|ref|NP_001031196.1| vacuolar cation/proton exchanger 5 [Arabidopsis thaliana] gi|75154113|sp|Q8L783.1|CAX5_ARATH RecName: Full=Vacuolar cation/proton exchanger 5; AltName: Full=Ca(2+)/H(+) antiporter CAX5; AltName: Full=Ca(2+)/H(+) exchanger 5; AltName: Full=Protein CATION EXCHANGER 5 gi|22531156|gb|AAM97082.1| H+/Ca2+ antiporter, putative [Arabidopsis thaliana] gi|30387539|gb|AAP31935.1| At1g55730 [Arabidopsis thaliana] gi|222424383|dbj|BAH20147.1| AT1G55730 [Arabidopsis thaliana] gi|332195169|gb|AEE33290.1| vacuolar cation/proton exchanger 5 [Arabidopsis thaliana] gi|332195170|gb|AEE33291.1| vacuolar cation/proton exchanger 5 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|224056879|ref|XP_002299069.1| Ca2+ antiporter/cation exchanger [Populus trichocarpa] gi|222846327|gb|EEE83874.1| Ca2+ antiporter/cation exchanger [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|297853280|ref|XP_002894521.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297340363|gb|EFH70780.1| predicted protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|356524415|ref|XP_003530824.1| PREDICTED: vacuolar cation/proton exchanger 5-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|255567156|ref|XP_002524559.1| Vacuolar cation/proton exchanger, putative [Ricinus communis] gi|223536112|gb|EEF37767.1| Vacuolar cation/proton exchanger, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|297829868|ref|XP_002882816.1| hypothetical protein ARALYDRAFT_897557 [Arabidopsis lyrata subsp. lyrata] gi|297328656|gb|EFH59075.1| hypothetical protein ARALYDRAFT_897557 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 456 | ||||||
| TAIR|locus:2020462 | 441 | CAX5 "cation exchanger 5" [Ara | 0.942 | 0.975 | 0.727 | 8.7e-166 | |
| TAIR|locus:2088130 | 441 | CAX2 "cation exchanger 2" [Ara | 0.925 | 0.956 | 0.726 | 8.1e-163 | |
| TAIR|locus:2074348 | 459 | CAX3 "cation exchanger 3" [Ara | 0.910 | 0.904 | 0.479 | 1.4e-94 | |
| ASPGD|ASPL0000052404 | 434 | vcxA [Emericella nidulans (tax | 0.800 | 0.841 | 0.420 | 2.3e-71 | |
| GENEDB_PFALCIPARUM|PFF0170w | 441 | PFF0170w "calcium antiporter, | 0.416 | 0.430 | 0.383 | 4.7e-68 | |
| UNIPROTKB|C6KSN3 | 441 | PFF0170w "Calcium antiporter, | 0.416 | 0.430 | 0.383 | 4.7e-68 | |
| CGD|CAL0005539 | 416 | VCX1 [Candida albicans (taxid: | 0.861 | 0.944 | 0.4 | 5.6e-68 | |
| UNIPROTKB|G4NFU3 | 782 | MGG_08710 "Vacuolar calcium io | 0.460 | 0.268 | 0.426 | 8e-68 | |
| SGD|S000002286 | 411 | VCX1 "Vacuolar membrane antipo | 0.811 | 0.900 | 0.409 | 9.2e-68 | |
| UNIPROTKB|G4NIP8 | 611 | MGG_04159 "Calcium-proton exch | 0.423 | 0.315 | 0.417 | 4.2e-66 |
| TAIR|locus:2020462 CAX5 "cation exchanger 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1613 (572.9 bits), Expect = 8.7e-166, P = 8.7e-166
Identities = 321/441 (72%), Positives = 365/441 (82%)
Query: 11 ESNLEMGSLDDRSMHEFEDESLFTPEAESEKIQRVHGLQNGSVSGDFPSSGNKILQNSVC 70
++ +EMG ++D E +SLF + +S + + ++ GS+S F K NSV
Sbjct: 11 QAQVEMGLVND-----VEHKSLFRRDTDSPERKAASLMEQGSLSASFRECSTKTPNNSVL 65
Query: 71 RSIKTVVFSNKLNLLMPFGPLAIMVHNLTGHKGWVFFLSLLGITPLAERLGYATEQLTFF 130
+S K V+ SNKLNLL+PFGPLAI++H LT +KGW+F LSL+GITPLAERLGYATEQL +
Sbjct: 66 QSFKIVILSNKLNLLLPFGPLAILLHYLTDNKGWIFLLSLVGITPLAERLGYATEQLACY 125
Query: 131 TGATVGGLLNATFGNATELIISIYALKSGMIRVVQLSLLGSILSNMLLVLGCAFFCGGLI 190
TG+TVGGLLNATFGN TELIISI+ALKSGMIRVVQL+LLGSILSNMLLVLGCAFFCGGL+
Sbjct: 126 TGSTVGGLLNATFGNVTELIISIFALKSGMIRVVQLTLLGSILSNMLLVLGCAFFCGGLV 185
Query: 191 CCKKEQVFNKASAVVNSGLLLMAVMGLVFPAVLHYTHTEVHFGKSELALSRFSSCIMLVA 250
+KEQVF+K +AVVNSGLLLMAVMGL+FPAVLHYTH+EVH G SELALSRFSSCIMLVA
Sbjct: 186 FSQKEQVFDKGNAVVNSGLLLMAVMGLLFPAVLHYTHSEVHAGSSELALSRFSSCIMLVA 245
Query: 251 YGAYLFFQLRGQTELYVPLSEDENQTXXXXXXXXXXXXXEAPEISKWESLIWLAIMTAWI 310
Y AYLFFQL+ Q Y PL+E+ NQ E PEISKWE++IWL+I+TAW+
Sbjct: 246 YAAYLFFQLKSQPSSYTPLTEETNQNEETSDDD------EDPEISKWEAIIWLSILTAWV 299
Query: 311 SILSQYVVDAIEGASASWNIPISFISVILLPIVGNAAEHASAIMFAMKDKLDISLGVAIG 370
S+LS Y+VDAIEGAS SW IPISFISVILLPIVGNAAEHA AIMFAMKDKLD+SLGVAIG
Sbjct: 300 SLLSGYLVDAIEGASVSWKIPISFISVILLPIVGNAAEHAGAIMFAMKDKLDLSLGVAIG 359
Query: 371 SSTQISMFGIPFCVVIGWIMGRPMDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLML 430
SS QISMF +PFCVVIGW+MG MDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLML
Sbjct: 360 SSIQISMFAVPFCVVIGWMMGAQMDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLML 419
Query: 431 ILCYLIVAASFFVHEDPTSDD 451
ILCYLIVAASFFVHEDP DD
Sbjct: 420 ILCYLIVAASFFVHEDPHQDD 440
|
|
| TAIR|locus:2088130 CAX2 "cation exchanger 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2074348 CAX3 "cation exchanger 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| ASPGD|ASPL0000052404 vcxA [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
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| GENEDB_PFALCIPARUM|PFF0170w PFF0170w "calcium antiporter, putative" [Plasmodium falciparum (taxid:5833)] | Back alignment and assigned GO terms |
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| UNIPROTKB|C6KSN3 PFF0170w "Calcium antiporter, putative" [Plasmodium falciparum 3D7 (taxid:36329)] | Back alignment and assigned GO terms |
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| CGD|CAL0005539 VCX1 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
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| UNIPROTKB|G4NFU3 MGG_08710 "Vacuolar calcium ion transporter" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
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| SGD|S000002286 VCX1 "Vacuolar membrane antiporter with Ca2+/H+ and K+/H+ exchange activity" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
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| UNIPROTKB|G4NIP8 MGG_04159 "Calcium-proton exchanger" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00033462001 | SubName- Full=Chromosome chr19 scaffold_66, whole genome shotgun sequence; (463 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 456 | |||
| TIGR00846 | 365 | TIGR00846, caca2, calcium/proton exchanger | 1e-115 | |
| TIGR00378 | 349 | TIGR00378, cax, calcium/proton exchanger (cax) | 1e-93 | |
| COG0387 | 368 | COG0387, ChaA, Ca2+/H+ antiporter [Inorganic ion t | 5e-86 | |
| pfam01699 | 135 | pfam01699, Na_Ca_ex, Sodium/calcium exchanger prot | 5e-25 | |
| COG0530 | 320 | COG0530, ECM27, Ca2+/Na+ antiporter [Inorganic ion | 7e-17 | |
| pfam01699 | 135 | pfam01699, Na_Ca_ex, Sodium/calcium exchanger prot | 7e-15 | |
| TIGR00367 | 307 | TIGR00367, TIGR00367, K+-dependent Na+/Ca+ exchang | 9e-09 | |
| PRK10599 | 366 | PRK10599, PRK10599, calcium/sodium:proton antiport | 0.002 |
| >gnl|CDD|129926 TIGR00846, caca2, calcium/proton exchanger | Back alignment and domain information |
|---|
Score = 341 bits (877), Expect = e-115
Identities = 173/372 (46%), Positives = 239/372 (64%), Gaps = 11/372 (2%)
Query: 71 RSIKTVVFSNKLNLLMPFGPLAIMVHNLTGHKGWVFFLSLLGITPLAERLGYATEQLTFF 130
++ V+ + LN+L+ F P AI++ + +F L+LLGI PLAER+ +ATEQL
Sbjct: 5 SVLQEVILGSWLNILLIFVPAAIILGLWGWSQTVIFLLNLLGIIPLAERVSFATEQLAHR 64
Query: 131 TGATVGGLLNATFGNATELIISIYALKSGMIRVVQLSLLGSILSNMLLVLGCAFFCGGLI 190
G T+GGLLNATFGNA ELIIS+ AL G + VV+ SLLGSILSN+LLVLG + F GG I
Sbjct: 65 LGPTLGGLLNATFGNAVELIISLMALGEGKVEVVRASLLGSILSNLLLVLGLSLFLGG-I 123
Query: 191 CCKKEQVFNKASAVVNSGLLLMAVMGLVFPAVLHYTHTEVHFGKSELALSRFSSCIMLVA 250
+EQ FN+ +A VNS LLL+A++ LV P L L LSR + +ML+
Sbjct: 124 KNIREQRFNRGAAQVNSALLLLAILSLVLPLALPAGKPGQDS---ILGLSRGIAIVMLIL 180
Query: 251 YGAYLFFQLRGQTELYVPLSEDENQTGNDADHGGNHDDNEAPEISKWESLIWLAIMTAWI 310
YGA+L FQL +L+ P E+ + +D H E IS W + WL T +
Sbjct: 181 YGAFLVFQLVTHRQLFEP-QEEADSDYDDEVHE------EPTVISPWSAAAWLVGATIVV 233
Query: 311 SILSQYVVDAIEGASASWNIPISFISVILLPIVGNAAEHASAIMFAMKDKLDISLGVAIG 370
++L++Y+VD IE A SW + ++FI VIL PIVGNAAEHA A++ A K+KLDI+LGVA+G
Sbjct: 234 ALLAEYLVDTIESAVESWGLSVAFIGVILAPIVGNAAEHAGAVIAAFKNKLDIALGVALG 293
Query: 371 SSTQISMFGIPFCVVIGWIMGRPMDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLML 430
S+ QI++F +P V++ W++G PMDLNF ET L ++V + LQ+G SNY +G +L
Sbjct: 294 SALQIALFVVPVVVLVAWMLGIPMDLNFGAPETVALALSVFLTTITLQDGRSNYLEGAVL 353
Query: 431 ILCYLIVAASFF 442
+ Y+I+A FF
Sbjct: 354 LALYIIIAMLFF 365
|
The Ca2+:Cation Antiporter (CaCA) Family (TC 2.A.19)Proteins of the CaCA family are found ubiquitously, having been identified in animals, plants, yeast, archaea and widely divergent bacteria.All of the characterized animal proteins catalyze Ca2+:Na+ exchange although some also transport K+. The NCX1 plasma membrane protein exchanges 3 Na+ for 1 Ca2+. The E. coli ChaA protein catalyzes Ca2+:H+ antiport but may also catalyze Na+:H+ antiport. All remaining well-characterized members of the family catalyze Ca2+:H+ exchange.This model is generated from the calcium ion/proton exchangers of the CacA family [Transport and binding proteins, Cations and iron carrying compounds]. Length = 365 |
| >gnl|CDD|129474 TIGR00378, cax, calcium/proton exchanger (cax) | Back alignment and domain information |
|---|
| >gnl|CDD|223464 COG0387, ChaA, Ca2+/H+ antiporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
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| >gnl|CDD|216653 pfam01699, Na_Ca_ex, Sodium/calcium exchanger protein | Back alignment and domain information |
|---|
| >gnl|CDD|223604 COG0530, ECM27, Ca2+/Na+ antiporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|216653 pfam01699, Na_Ca_ex, Sodium/calcium exchanger protein | Back alignment and domain information |
|---|
| >gnl|CDD|232943 TIGR00367, TIGR00367, K+-dependent Na+/Ca+ exchanger related-protein | Back alignment and domain information |
|---|
| >gnl|CDD|182580 PRK10599, PRK10599, calcium/sodium:proton antiporter; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 456 | |||
| KOG1397 | 441 | consensus Ca2+/H+ antiporter VCX1 and related prot | 100.0 | |
| TIGR00378 | 349 | cax calcium/proton exchanger (cax). | 100.0 | |
| TIGR00846 | 365 | caca2 calcium/proton exchanger. This model is gene | 100.0 | |
| COG0387 | 368 | ChaA Ca2+/H+ antiporter [Inorganic ion transport a | 100.0 | |
| PRK10599 | 366 | calcium/sodium:proton antiporter; Provisional | 100.0 | |
| PRK10734 | 325 | putative calcium/sodium:proton antiporter; Provisi | 100.0 | |
| TIGR00367 | 307 | K+-dependent Na+/Ca+ exchanger related-protein. Th | 100.0 | |
| COG0530 | 320 | ECM27 Ca2+/Na+ antiporter [Inorganic ion transport | 100.0 | |
| TIGR00927 | 1096 | 2A1904 K+-dependent Na+/Ca+ exchanger. | 99.98 | |
| KOG1307 | 588 | consensus K+-dependent Ca2+/Na+ exchanger NCKX1 an | 99.97 | |
| PLN03151 | 650 | cation/calcium exchanger; Provisional | 99.94 | |
| PRK10734 | 325 | putative calcium/sodium:proton antiporter; Provisi | 99.81 | |
| TIGR00367 | 307 | K+-dependent Na+/Ca+ exchanger related-protein. Th | 99.77 | |
| KOG2399 | 605 | consensus K+-dependent Na+:Ca2+ antiporter [Inorga | 99.76 | |
| PF01699 | 140 | Na_Ca_ex: Sodium/calcium exchanger protein; InterP | 99.74 | |
| TIGR00927 | 1096 | 2A1904 K+-dependent Na+/Ca+ exchanger. | 99.73 | |
| COG0530 | 320 | ECM27 Ca2+/Na+ antiporter [Inorganic ion transport | 99.71 | |
| KOG1307 | 588 | consensus K+-dependent Ca2+/Na+ exchanger NCKX1 an | 99.56 | |
| PLN03151 | 650 | cation/calcium exchanger; Provisional | 99.56 | |
| PF01699 | 140 | Na_Ca_ex: Sodium/calcium exchanger protein; InterP | 99.46 | |
| TIGR00845 | 928 | caca sodium/calcium exchanger 1. This model is spe | 99.46 | |
| TIGR00378 | 349 | cax calcium/proton exchanger (cax). | 99.45 | |
| TIGR00846 | 365 | caca2 calcium/proton exchanger. This model is gene | 99.44 | |
| TIGR00845 | 928 | caca sodium/calcium exchanger 1. This model is spe | 99.29 | |
| PRK10599 | 366 | calcium/sodium:proton antiporter; Provisional | 98.43 | |
| KOG2399 | 605 | consensus K+-dependent Na+:Ca2+ antiporter [Inorga | 98.43 | |
| COG0387 | 368 | ChaA Ca2+/H+ antiporter [Inorganic ion transport a | 97.79 | |
| KOG1306 | 596 | consensus Ca2+/Na+ exchanger NCX1 and related prot | 97.58 | |
| KOG1306 | 596 | consensus Ca2+/Na+ exchanger NCX1 and related prot | 97.5 | |
| KOG1397 | 441 | consensus Ca2+/H+ antiporter VCX1 and related prot | 97.2 | |
| PRK10929 | 1109 | putative mechanosensitive channel protein; Provisi | 87.0 |
| >KOG1397 consensus Ca2+/H+ antiporter VCX1 and related proteins [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-90 Score=680.09 Aligned_cols=393 Identities=59% Similarity=0.950 Sum_probs=360.2
Q ss_pred CCCCCCCCCCCCccccchHHHhhhhhhhhhchhHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012798 49 QNGSVSGDFPSSGNKILQNSVCRSIKTVVFSNKLNLLMPFGPLAIMVHNLTGHKGWVFFLSLLGITPLAERLGYATEQLT 128 (456)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Ll~~vP~~~~~~~~~~~~~~vF~~~~laiipla~~l~~~~e~la 128 (456)
+++++....++.+|+..+ .+...+|++++++++|.++||+|+++..||.+|++.|+|.+|+++|+|+|++++++|||+|
T Consensus 43 ~~k~~l~~~~~~~w~~~k-~~~~~l~~Vll~~~l~~lf~f~pl~~~~h~~~~s~~~vF~lsll~iiPLA~~l~~ateqls 121 (441)
T KOG1397|consen 43 EKKSLLSLIKHAPWKYLK-NVLTNLQEVLLSTKLNLLFPFVPLAIIAHWFTWSKGWVFLLSLLGIIPLAERLGFATEQLS 121 (441)
T ss_pred hhccchhhhhhhhhHHHH-HHHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccchHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 444444444455666666 5899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcchhHHHHHHHhhchhHHHHHHHHhhcCCceeeeecchhhHHHHHHHHHHHHHHhccceeecceeEeehhhhHHHHH
Q 012798 129 FFTGATVGGLLNATFGNATELIISIYALKSGMIRVVQLSLLGSILSNMLLVLGCAFFCGGLICCKKEQVFNKASAVVNSG 208 (456)
Q Consensus 129 ~~~g~~vgGll~at~Gn~pELivsi~Al~~g~~~iv~gsilGSil~nllLvlG~~~l~gg~~~~~~~q~f~~~~a~~~s~ 208 (456)
.++|+++||++||+|||+.|+|++++|+++|+.++||++++||+++|+|||+|+|+++||++ ||+|+||++.+++++.
T Consensus 122 ~~tg~tvGgllNAtfGnaiElii~ilALk~g~~riVq~SlLGSILsnlLLvlG~s~~~Ggi~--rk~Q~Fn~~~A~v~s~ 199 (441)
T KOG1397|consen 122 AYTGPTVGGLLNATFGNAIELIIYILALKNGKVRIVQGSLLGSILSNLLLVLGLSLFCGGIR--RKDQRFNIKSAGVNSA 199 (441)
T ss_pred hhcCCcHHHHHhhhhccHHHHHHHHHHhhcCceEEEehhhHHHHHHHHHHHhhHHHhhcccc--cceeecccchhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999996 7899999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccccc----cCccccccchhhHHHHHHHHHHHHHHHHHhcc--ccccCcccccccCCCCCCC
Q 012798 209 LLLMAVMGLVFPAVLHYTHTEVH----FGKSELALSRFSSCIMLVAYGAYLFFQLRGQT--ELYVPLSEDENQTGNDADH 282 (456)
Q Consensus 209 lllla~~~lllp~~~~~~~~~~~----~~~~~~~lSr~~siiLL~~Y~~yl~f~l~th~--~~f~~~~e~~~~~~~~~~~ 282 (456)
+++++++++++|+++++++++.. .++..+.+||++|++|++.|++|++||+|||+ ..+..++|+++ +.+
T Consensus 200 lLl~a~l~~l~P~~l~~~~~~~~~~~~~~~~~l~lSr~~SivmliaYi~~L~FqL~t~~h~~~~~~~~ee~~-----~~d 274 (441)
T KOG1397|consen 200 LLLLAVLGILLPTVLHYTYGGEVHDCSSGGAILPLSRGCSIVMLIAYIAYLWFQLKTARHIWQFPTPDEEET-----EQD 274 (441)
T ss_pred HHHHHHHHHHHHHHHHHhcCccccccCCccceeeehhccHHHHHHHHHHHHHHhhhcccccCCCCCCChhcc-----ccc
Confidence 99999999999999999987442 23457899999999999999999999999966 44544333221 111
Q ss_pred CCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhhhHhHHHHhhchhHHHHHHHHHHhCCcc
Q 012798 283 GGNHDDNEAPEISKWESLIWLAIMTAWISILSQYVVDAIEGASASWNIPISFISVILLPIVGNAAEHASAIMFAMKDKLD 362 (456)
Q Consensus 283 ~~~~~~~e~~~~s~~~ai~~L~~~~~li~~~a~~lV~si~~i~~~~gis~~fiGlillpi~ts~pE~~~ai~~a~kg~~d 362 (456)
++..++||.|+|++|++++||++.|++++++|||+|+++|++++++|+|++|+|+|++|+++|++||++||.+|.|||+|
T Consensus 275 ~~~s~~~e~p~is~~ss~~~L~~~T~~vsllaeyLV~~Id~~~ds~~ls~~FiglillpiVgNaaEh~~AI~fA~k~kld 354 (441)
T KOG1397|consen 275 DEVSNEDEAPNISRWSSIIWLLIMTLLVSLLAEYLVDTIDDVSDSWGLSVKFIGLILLPIVGNAAEHAGAISFAMKDKLD 354 (441)
T ss_pred ccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhheeeeecccCchHHhhcceeeeecCccc
Confidence 22223677899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHhhhHHHHHHHHHHHHHHHHHhhcCCcccccchhHHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHHHHHHHh
Q 012798 363 ISLGVAIGSSTQISMFGIPFCVVIGWIMGRPMDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLMLILCYLIVAASFF 442 (456)
Q Consensus 363 laig~~iGS~i~~~l~v~p~~vli~~~~g~~~~l~f~~~~~~~l~lsvll~~~~~~~g~~~~~~G~~Ll~~Y~i~~~~~~ 442 (456)
+++|+++||++|+++|++|++++++|++|++|+++|+.+|+.++++++++++|+++||++||++|.+|+++|++++++||
T Consensus 355 LslgVaigsalQI~Lf~vP~~v~v~W~~g~~M~LnF~~~et~~l~isVfl~~y~lqdG~Sny~kG~mLll~Y~Iia~~Ff 434 (441)
T KOG1397|consen 355 LSLGVAIGSALQIALFVVPFSVIVGWIMGISMDLNFPLLETACLFISVFLVAYLLQDGKSNYFKGLMLLLCYLIIAAGFF 434 (441)
T ss_pred chhhhhhhhhHhHHHhhhhHHHHhhhhcCCceEEeccHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCCC
Q 012798 443 VHEDPTS 449 (456)
Q Consensus 443 ~~~~~~~ 449 (456)
++++|..
T Consensus 435 ~~~~~~~ 441 (441)
T KOG1397|consen 435 VYNDPSQ 441 (441)
T ss_pred ccCCCCC
Confidence 9999963
|
|
| >TIGR00378 cax calcium/proton exchanger (cax) | Back alignment and domain information |
|---|
| >TIGR00846 caca2 calcium/proton exchanger | Back alignment and domain information |
|---|
| >COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PRK10599 calcium/sodium:proton antiporter; Provisional | Back alignment and domain information |
|---|
| >PRK10734 putative calcium/sodium:proton antiporter; Provisional | Back alignment and domain information |
|---|
| >TIGR00367 K+-dependent Na+/Ca+ exchanger related-protein | Back alignment and domain information |
|---|
| >COG0530 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger | Back alignment and domain information |
|---|
| >KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PLN03151 cation/calcium exchanger; Provisional | Back alignment and domain information |
|---|
| >PRK10734 putative calcium/sodium:proton antiporter; Provisional | Back alignment and domain information |
|---|
| >TIGR00367 K+-dependent Na+/Ca+ exchanger related-protein | Back alignment and domain information |
|---|
| >KOG2399 consensus K+-dependent Na+:Ca2+ antiporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PF01699 Na_Ca_ex: Sodium/calcium exchanger protein; InterPro: IPR004837 The sodium/calcium exchangers are a family of integral membrane proteins | Back alignment and domain information |
|---|
| >TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger | Back alignment and domain information |
|---|
| >COG0530 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PLN03151 cation/calcium exchanger; Provisional | Back alignment and domain information |
|---|
| >PF01699 Na_Ca_ex: Sodium/calcium exchanger protein; InterPro: IPR004837 The sodium/calcium exchangers are a family of integral membrane proteins | Back alignment and domain information |
|---|
| >TIGR00845 caca sodium/calcium exchanger 1 | Back alignment and domain information |
|---|
| >TIGR00378 cax calcium/proton exchanger (cax) | Back alignment and domain information |
|---|
| >TIGR00846 caca2 calcium/proton exchanger | Back alignment and domain information |
|---|
| >TIGR00845 caca sodium/calcium exchanger 1 | Back alignment and domain information |
|---|
| >PRK10599 calcium/sodium:proton antiporter; Provisional | Back alignment and domain information |
|---|
| >KOG2399 consensus K+-dependent Na+:Ca2+ antiporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >KOG1306 consensus Ca2+/Na+ exchanger NCX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG1306 consensus Ca2+/Na+ exchanger NCX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG1397 consensus Ca2+/H+ antiporter VCX1 and related proteins [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PRK10929 putative mechanosensitive channel protein; Provisional | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 456 | |||
| 3v5u_A | 320 | Uncharacterized membrane protein MJ0091; lipid cub | 5e-11 |
| >3v5u_A Uncharacterized membrane protein MJ0091; lipid cubic phase, cation protein complex, sodium,calcium EX membrane protein; HET: OLC MYS 1PE; 1.90A {Methanocaldococcus jannaschii} PDB: 3v5s_A* Length = 320 | Back alignment and structure |
|---|
Score = 62.6 bits (153), Expect = 5e-11
Identities = 47/295 (15%), Positives = 103/295 (34%), Gaps = 60/295 (20%)
Query: 148 ELIISIYALKSGMIRVVQLSLLGSILSNMLLVLGCAFFCGGLICCKKEQVFNKASAVVNS 207
E++ S YA + + +GS + N+ LVLG + +I + +
Sbjct: 54 EILTSAYASYMHAPGISIGNAIGSCICNIGLVLGLSAIISPIIV---------DKNLQKN 104
Query: 208 GLLLMAVMGLVFPAVLHYTHTEVHFGKSELALSRFSSCIMLVAYGAYLFFQLRGQTELYV 267
L+ + + + S ++L+ + YL + ++ +
Sbjct: 105 ILVYLLFVIFAAVIGIDG-------------FSWIDGVVLLILFIIYLRWTVKNGSA--- 148
Query: 268 PLSEDENQTGNDADHGGNHDDNEAPEISKWESLIWLAIMTAWISILSQYVVDAIEGASAS 327
++N+ S SL+ L I + + ++ VD + + +
Sbjct: 149 ----------------EIEENNDKNNPSVVFSLVLLIIGLIGVLVGAELFVDGAKKIALA 192
Query: 328 WNIPISFISVIL------LPIVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQISMFGIP 381
+I I L LP E ++ A ++ + LG IGS ++ I
Sbjct: 193 LDISDKVIGFTLVAFGTSLP------ELMVSLAAAKRNLGGMVLGNVIGS----NIADI- 241
Query: 382 FCVVIGWIMGRPMDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLMLILCYLI 436
+ + M L + + A L I +++ F + ++G++ + Y+I
Sbjct: 242 -GGALA-VGSLFMHLPAENVQMAVLVIMSLLLYLFAKYSKIGRWQGILFLALYII 294
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 456 | |||
| 3v5u_A | 320 | Uncharacterized membrane protein MJ0091; lipid cub | 100.0 | |
| 3v5u_A | 320 | Uncharacterized membrane protein MJ0091; lipid cub | 99.82 |
| >3v5u_A Uncharacterized membrane protein MJ0091; lipid cubic phase, cation protein complex, sodium,calcium EX membrane protein; HET: OLC MYS 1PE; 1.90A {Methanocaldococcus jannaschii} PDB: 3v5s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-48 Score=386.59 Aligned_cols=294 Identities=18% Similarity=0.195 Sum_probs=245.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--chhHHHHHHHhh-chhHHHHHHHHhhcCCceeeeecchhhHHHHHHHH
Q 012798 103 GWVFFLSLLGITPLAERLGYATEQLTFFTG--ATVGGLLNATFG-NATELIISIYALKSGMIRVVQLSLLGSILSNMLLV 179 (456)
Q Consensus 103 ~~vF~~~~laiipla~~l~~~~e~la~~~g--~~vgGll~at~G-n~pELivsi~Al~~g~~~iv~gsilGSil~nllLv 179 (456)
...|+.++++++++++++++++|++|+++| |.+.|++++++| |+||+++++.|..+|++|+++||++|||++|++++
T Consensus 6 ~~~l~~g~~~l~~~a~~lv~~~~~la~~lgis~~viGltiva~GTSlPEl~vsi~A~~~g~~diaiGnivGSni~nillv 85 (320)
T 3v5u_A 6 VGYFLLGLILLYYGSDWFVLGSERIARHFNVSNFVIGATVMAIGTSLPEILTSAYASYMHAPGISIGNAIGSCICNIGLV 85 (320)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTBCHHHHHHTHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHcccHHHHHHHHHHhCCCCceeeeeecchHHHHHHHH
Confidence 456889999999999999999999999997 999999999999 69999999999999999999999999999999999
Q ss_pred HHHHHHhccceeecceeEeehhhhHHHHHHHHHHHHHHHHHHHHhhhccccccCccccccchhhHHHHHHHHHHHHHHHH
Q 012798 180 LGCAFFCGGLICCKKEQVFNKASAVVNSGLLLMAVMGLVFPAVLHYTHTEVHFGKSELALSRFSSCIMLVAYGAYLFFQL 259 (456)
Q Consensus 180 lG~~~l~gg~~~~~~~q~f~~~~a~~~s~lllla~~~lllp~~~~~~~~~~~~~~~~~~lSr~~siiLL~~Y~~yl~f~l 259 (456)
+|+|+++++++. ++.+.++ ..+++++++. +++ +. .++ ++|++|++|+.+|+.|++|++
T Consensus 86 lG~~~li~p~~v---~~~~~~d-----~~~~l~~~~~-l~~--~~----------~~g-is~~~g~~Ll~~Y~~yl~~~~ 143 (320)
T 3v5u_A 86 LGLSAIISPIIV---DKNLQKN-----ILVYLLFVIF-AAV--IG----------IDG-FSWIDGVVLLILFIIYLRWTV 143 (320)
T ss_dssp HHHHHHHSCBCC---CHHHHHH-----HHHHHHHHHH-HHH--HT----------TTC-BCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccccc---cHHHHHH-----HHHHHHHHHH-HHH--HH----------Hcc-cHHHHHHHHHHHHHHHHHHHH
Confidence 999999999764 2223333 3334443322 222 11 124 999999999999999999999
Q ss_pred HhccccccCcccccccCCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhhhHhH
Q 012798 260 RGQTELYVPLSEDENQTGNDADHGGNHDDNEAPEISKWESLIWLAIMTAWISILSQYVVDAIEGASASWNIPISFISVIL 339 (456)
Q Consensus 260 ~th~~~f~~~~e~~~~~~~~~~~~~~~~~~e~~~~s~~~ai~~L~~~~~li~~~a~~lV~si~~i~~~~gis~~fiGlil 339 (456)
++|++. + | +++++++.+.++.+.+++++++++..+++++|++++.+++.+|+|+.++|+|+
T Consensus 144 ~~~~~~-----~------------~--~~~~~~~~~~~~~~~~l~~~l~~l~~~a~~lv~~~~~ia~~~gis~~~iGltl 204 (320)
T 3v5u_A 144 KNGSAE-----I------------E--ENNDKNNPSVVFSLVLLIIGLIGVLVGAELFVDGAKKIALALDISDKVIGFTL 204 (320)
T ss_dssp HHTBC--------------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHT
T ss_pred Hhcccc-----c------------c--cccccccccHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHhCCchHHHHHHH
Confidence 988741 1 1 11122356778899999999999999999999999999999999999999999
Q ss_pred HHHhhchhHHHHHHHHHHhCCccchHHHhhhHHHHHHHHHHHHHHHHHhhcCCcccccchhHHHHHHHHHHHHHHHHHhC
Q 012798 340 LPIVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQISMFGIPFCVVIGWIMGRPMDLNFQLFETATLFITVIVVAFFLQE 419 (456)
Q Consensus 340 lpi~ts~pE~~~ai~~a~kg~~dlaig~~iGS~i~~~l~v~p~~vli~~~~g~~~~l~f~~~~~~~l~lsvll~~~~~~~ 419 (456)
+|++||+||+++++.+++||+.|+|+|+++|||+||.++++|+..++ .|++++ .+|...++...+++..+++|
T Consensus 205 va~gtslPE~~~sv~aa~~g~~~laig~iiGS~ifn~~~v~g~~~li-----~p~~~~--~~d~~~~l~~~~ll~~~~~~ 277 (320)
T 3v5u_A 205 VAFGTSLPELMVSLAAAKRNLGGMVLGNVIGSNIADIGGALAVGSLF-----MHLPAE--NVQMAVLVIMSLLLYLFAKY 277 (320)
T ss_dssp HHHHHTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTHHHHHHHH-----SCBCCC--HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhccHHHHHHHHHHHcCCCcHHHHHHHhHHHHHHHHHHHHHHhh-----ccccch--HHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999998887 466654 66764443333333347789
Q ss_pred CccchHHHHHHHHHHHH-HHHHHhhc
Q 012798 420 GTSNYFKGLMLILCYLI-VAASFFVH 444 (456)
Q Consensus 420 g~~~~~~G~~Ll~~Y~i-~~~~~~~~ 444 (456)
||++|+||.+|+++|++ |....+..
T Consensus 278 ~~i~~~eG~~ll~~Y~~~y~~~~~~~ 303 (320)
T 3v5u_A 278 SKIGRWQGILFLALYIIAIASLRMGG 303 (320)
T ss_dssp SCBSHHHHHHHHHHHHHHHHHSCSSC
T ss_pred CcCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999 99887653
|
| >3v5u_A Uncharacterized membrane protein MJ0091; lipid cubic phase, cation protein complex, sodium,calcium EX membrane protein; HET: OLC MYS 1PE; 1.90A {Methanocaldococcus jannaschii} PDB: 3v5s_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00