Citrus Sinensis ID: 012798


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450------
MDIKLQLEGAESNLEMGSLDDRSMHEFEDESLFTPEAESEKIQRVHGLQNGSVSGDFPSSGNKILQNSVCRSIKTVVFSNKLNLLMPFGPLAIMVHNLTGHKGWVFFLSLLGITPLAERLGYATEQLTFFTGATVGGLLNATFGNATELIISIYALKSGMIRVVQLSLLGSILSNMLLVLGCAFFCGGLICCKKEQVFNKASAVVNSGLLLMAVMGLVFPAVLHYTHTEVHFGKSELALSRFSSCIMLVAYGAYLFFQLRGQTELYVPLSEDENQTGNDADHGGNHDDNEAPEISKWESLIWLAIMTAWISILSQYVVDAIEGASASWNIPISFISVILLPIVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQISMFGIPFCVVIGWIMGRPMDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLMLILCYLIVAASFFVHEDPTSDDNQVKT
ccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHcHHHHHHHHHHHHHHcccEEEEHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHEEEEccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHcHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHEEEcccccccccccc
ccHHHHccccccEEEEccccccccEEccccccccccccccccccccccccccccccccccccccHcHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccccEEEEHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHEEHHHHccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccccccccccc
MDIKLQlegaesnlemgslddrsmhefedeslftpeaeseKIQRVhglqngsvsgdfpssgnkilqnsvcRSIKTVVFSNklnllmpfgpLAIMVHNLTGHKGWVFFLSLLGITPLAERLGYATEQLTFFTgatvggllnatfgnATELIISIYALKSGMIRVVQLSLLGSILSNMLLVLGCAffcgglicckkeqVFNKASAVVNSGLLLMAVMGLVFPAVLHYTHTEVHFGKSELALSRFSSCIMLVAYGAYLFFQLRgqtelyvplsedenqtgndadhggnhddneapeisKWESLIWLAIMTAWISILSQYVVDAIEgasaswnipiSFISVILLPIVGNAAEHASAIMFAMKDKLDISLgvaigsstqismfgIPFCVVIGwimgrpmdlnfQLFETATLFITVIVVAFFLQEGTSNYFKGLMLILCYLIVAAsffvhedptsddnqvkt
mdiklqlegaesnlemgslddrsMHEFEDESLFTPEAESEKIQRVHGLQNGSVSGDFPSSGNKILQNSVCRSIKTVVFSNKLNLLMPFGPLAIMVHNLTGHKGWVFFLSLLGITPLAERLGYATEQLTFFTGATVGGLLNATFGNATELIISIYALKSGMIRVVQLSLLGSILSNMLLVLGCAFFCGGLICCKKEQVFNKASAVVNSGLLLMAVMGLVFPAVLHYTHTEVHFGKSELALSRFSSCIMLVAYGAYLFFQLRGQTELYVPLSEDENQTGNDADHGGNHDDNEAPEISKWESLIWLAIMTAWISILSQYVVDAIEGASASWNIPISFISVILLPIVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQISMFGIPFCVVIGWIMGRPMDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLMLILCYLIVAASFFVhedptsddnqvkt
MDIKLQLEGAESNLEMGSLDDRSMHEFEDESLFTPEAESEKIQRVHGLQNGSVSGDFPSSGNKILQNSVCRSIKTVVFSNKLNLLMPFGPLAIMVHNLTGHKGWVFFLSLLGITPLAERLGYATEQLTFFTGATVGGLLNATFGNATELIISIYALKSGMIRVVQLSLLGSILSNMLLVLGCAFFCGGLICCKKEQVFNKASAVVNSGLLLMAVMGLVFPAVLHYTHTEVHFGKSELALSRFSSCIMLVAYGAYLFFQLRGQTELYVPLSEDENQTgndadhggnhddnEAPEISKWESLIWLAIMTAWISILSQYVVDAIEGASASWNIPISFISVILLPIVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQISMFGIPFCVVIGWIMGRPMDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLMLILCYLIVAASFFVHEDPTSDDNQVKT
***************************************************************ILQNSVCRSIKTVVFSNKLNLLMPFGPLAIMVHNLTGHKGWVFFLSLLGITPLAERLGYATEQLTFFTGATVGGLLNATFGNATELIISIYALKSGMIRVVQLSLLGSILSNMLLVLGCAFFCGGLICCKKEQVFNKASAVVNSGLLLMAVMGLVFPAVLHYTHTEVHFGKSELALSRFSSCIMLVAYGAYLFFQLRGQTELYVP**************************SKWESLIWLAIMTAWISILSQYVVDAIEGASASWNIPISFISVILLPIVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQISMFGIPFCVVIGWIMGRPMDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLMLILCYLIVAASFFVH************
****************************************************************LQNSVCRSIKTVVFSNKLNLLMPFGPLAIMVHNLTGHKGWVFFLSLLGITPLAERLGYATEQLTFFTGATVGGLLNATFGNATELIISIYALKSGMIRVVQLSLLGSILSNMLLVLGCAFFCGGLICCKKEQVFNKASAVVNSGLLLMAVMGLVFPAVLHYTHTEVHFGKSELALSRFSSCIMLVAYGAYLFFQLRGQTELYVPLSEDENQTGNDADHGGNHDDNEAPEISKWESLIWLAIMTAWISILSQYVVDAIEGASASWNIPISFISVILLPIVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQISMFGIPFCVVIGWIMGRPMDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLMLILCYLIVAASFFVH************
MDIKLQLEGAESNLEMGSLDDRSMHEFEDESLFTPEAESEKIQRVHGLQNGSVSGDFPSSGNKILQNSVCRSIKTVVFSNKLNLLMPFGPLAIMVHNLTGHKGWVFFLSLLGITPLAERLGYATEQLTFFTGATVGGLLNATFGNATELIISIYALKSGMIRVVQLSLLGSILSNMLLVLGCAFFCGGLICCKKEQVFNKASAVVNSGLLLMAVMGLVFPAVLHYTHTEVHFGKSELALSRFSSCIMLVAYGAYLFFQLRGQTELYVPLSEDENQTGNDADHGGNHDDNEAPEISKWESLIWLAIMTAWISILSQYVVDAIEGASASWNIPISFISVILLPIVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQISMFGIPFCVVIGWIMGRPMDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLMLILCYLIVAASFFVHED**********
*DI*LQLEGAESNLEMGSLDDRSMHEFEDE********************************KILQNSVCRSIKTVVFSNKLNLLMPFGPLAIMVHNLTGHKGWVFFLSLLGITPLAERLGYATEQLTFFTGATVGGLLNATFGNATELIISIYALKSGMIRVVQLSLLGSILSNMLLVLGCAFFCGGLICCKKEQVFNKASAVVNSGLLLMAVMGLVFPAVLHYTHTEVHFGKSELALSRFSSCIMLVAYGAYLFFQLRGQTELYVP***********************PEISKWESLIWLAIMTAWISILSQYVVDAIEGASASWNIPISFISVILLPIVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQISMFGIPFCVVIGWIMGRPMDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLMLILCYLIVAASFFVHEDP*********
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MDIKLQLEGAESNLEMGSLDDRSMHEFEDESLFTPEAESEKIQRVHGLQNGSVSGDFPSSGNKILQNSVCRSIKTVVFSNKLNLLMPFGPLAIMVHNLTGHKGWVFFLSLLGITPLAERLGYATEQLTFFTGATVGGLLNATFGNATELIISIYALKSGMIRVVQLSLLGSILSNMLLVLGCAFFCGGLICCKKEQVFNKASAVVNSGLLLMAVMGLVFPAVLHYTHTEVHFGKSELALSRFSSCIMLVAYGAYLFFQLRGQTELYVPLSEDENQTGNDADHGGNHDDNEAPEISKWESLIWLAIMTAWISILSQYVVDAIEGASASWNIPISFISVILLPIVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQISMFGIPFCVVIGWIMGRPMDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLMLILCYLIVAASFFVHEDPTSDDNQVKT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query456 2.2.26 [Sep-21-2011]
Q8L783441 Vacuolar cation/proton ex yes no 0.942 0.975 0.732 0.0
Q39254441 Vacuolar cation/proton ex no no 0.940 0.972 0.713 0.0
Q9LFZ8448 Putative vacuolar cation/ no no 0.918 0.935 0.694 1e-168
Q5KQN0437 Vacuolar cation/proton ex yes no 0.899 0.938 0.687 1e-159
Q6K1C4417 Vacuolar cation/proton ex no no 0.875 0.956 0.694 1e-158
Q6YXZ1447 Putative vacuolar cation/ no no 0.942 0.961 0.6 1e-141
Q93Z81459 Vacuolar cation/proton ex no no 0.910 0.904 0.483 4e-96
Q945S5446 Vacuolar cation/proton ex no no 0.835 0.854 0.460 4e-94
Q39253463 Vacuolar cation/proton ex no no 0.910 0.896 0.439 1e-92
Q769E5451 Vacuolar cation/proton ex no no 0.815 0.824 0.498 5e-92
>sp|Q8L783|CAX5_ARATH Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana GN=CAX5 PE=2 SV=1 Back     alignment and function desciption
 Score =  651 bits (1679), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/441 (73%), Positives = 369/441 (83%), Gaps = 11/441 (2%)

Query: 11  ESNLEMGSLDDRSMHEFEDESLFTPEAESEKIQRVHGLQNGSVSGDFPSSGNKILQNSVC 70
           ++ +EMG ++D      E +SLF  + +S + +    ++ GS+S  F     K   NSV 
Sbjct: 11  QAQVEMGLVND-----VEHKSLFRRDTDSPERKAASLMEQGSLSASFRECSTKTPNNSVL 65

Query: 71  RSIKTVVFSNKLNLLMPFGPLAIMVHNLTGHKGWVFFLSLLGITPLAERLGYATEQLTFF 130
           +S K V+ SNKLNLL+PFGPLAI++H LT +KGW+F LSL+GITPLAERLGYATEQL  +
Sbjct: 66  QSFKIVILSNKLNLLLPFGPLAILLHYLTDNKGWIFLLSLVGITPLAERLGYATEQLACY 125

Query: 131 TGATVGGLLNATFGNATELIISIYALKSGMIRVVQLSLLGSILSNMLLVLGCAFFCGGLI 190
           TG+TVGGLLNATFGN TELIISI+ALKSGMIRVVQL+LLGSILSNMLLVLGCAFFCGGL+
Sbjct: 126 TGSTVGGLLNATFGNVTELIISIFALKSGMIRVVQLTLLGSILSNMLLVLGCAFFCGGLV 185

Query: 191 CCKKEQVFNKASAVVNSGLLLMAVMGLVFPAVLHYTHTEVHFGKSELALSRFSSCIMLVA 250
             +KEQVF+K +AVVNSGLLLMAVMGL+FPAVLHYTH+EVH G SELALSRFSSCIMLVA
Sbjct: 186 FSQKEQVFDKGNAVVNSGLLLMAVMGLLFPAVLHYTHSEVHAGSSELALSRFSSCIMLVA 245

Query: 251 YGAYLFFQLRGQTELYVPLSEDENQTGNDADHGGNHDDNEAPEISKWESLIWLAIMTAWI 310
           Y AYLFFQL+ Q   Y PL+E+ NQ    +      DD+E PEISKWE++IWL+I+TAW+
Sbjct: 246 YAAYLFFQLKSQPSSYTPLTEETNQNEETS------DDDEDPEISKWEAIIWLSILTAWV 299

Query: 311 SILSQYVVDAIEGASASWNIPISFISVILLPIVGNAAEHASAIMFAMKDKLDISLGVAIG 370
           S+LS Y+VDAIEGAS SW IPISFISVILLPIVGNAAEHA AIMFAMKDKLD+SLGVAIG
Sbjct: 300 SLLSGYLVDAIEGASVSWKIPISFISVILLPIVGNAAEHAGAIMFAMKDKLDLSLGVAIG 359

Query: 371 SSTQISMFGIPFCVVIGWIMGRPMDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLML 430
           SS QISMF +PFCVVIGW+MG  MDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLML
Sbjct: 360 SSIQISMFAVPFCVVIGWMMGAQMDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLML 419

Query: 431 ILCYLIVAASFFVHEDPTSDD 451
           ILCYLIVAASFFVHEDP  DD
Sbjct: 420 ILCYLIVAASFFVHEDPHQDD 440




Vacuolar cation/proton exchanger (CAX). Translocates Ca(2+) and other metal ions into vacuoles using the proton gradient formed by H(+)-ATPase and H(+)-pyrophosphatase.
Arabidopsis thaliana (taxid: 3702)
>sp|Q39254|CAX2_ARATH Vacuolar cation/proton exchanger 2 OS=Arabidopsis thaliana GN=CAX2 PE=1 SV=2 Back     alignment and function description
>sp|Q9LFZ8|CAX6_ARATH Putative vacuolar cation/proton exchanger 6 OS=Arabidopsis thaliana GN=CAX6 PE=2 SV=3 Back     alignment and function description
>sp|Q5KQN0|CAX2_ORYSJ Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica GN=CAX2 PE=2 SV=2 Back     alignment and function description
>sp|Q6K1C4|CAX3_ORYSJ Vacuolar cation/proton exchanger 3 OS=Oryza sativa subsp. japonica GN=CAX3 PE=2 SV=2 Back     alignment and function description
>sp|Q6YXZ1|CAX4_ORYSJ Putative vacuolar cation/proton exchanger 4 OS=Oryza sativa subsp. japonica GN=Os02g0138900 PE=3 SV=1 Back     alignment and function description
>sp|Q93Z81|CAX3_ARATH Vacuolar cation/proton exchanger 3 OS=Arabidopsis thaliana GN=CAX3 PE=1 SV=1 Back     alignment and function description
>sp|Q945S5|CAX4_ARATH Vacuolar cation/proton exchanger 4 OS=Arabidopsis thaliana GN=CAX4 PE=1 SV=2 Back     alignment and function description
>sp|Q39253|CAX1_ARATH Vacuolar cation/proton exchanger 1 OS=Arabidopsis thaliana GN=CAX1 PE=1 SV=3 Back     alignment and function description
>sp|Q769E5|CAX1A_ORYSJ Vacuolar cation/proton exchanger 1a OS=Oryza sativa subsp. japonica GN=CAX1a PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query456
359494235446 PREDICTED: vacuolar cation/proton exchan 0.942 0.964 0.768 0.0
380039664449 CAX2 transporter [Sedum alfredii] 0.969 0.984 0.742 0.0
380039662449 CAX2 transporter [Sedum alfredii] 0.969 0.984 0.748 0.0
359485864450 PREDICTED: vacuolar cation/proton exchan 0.960 0.973 0.748 0.0
30696001441 vacuolar cation/proton exchanger 5 [Arab 0.942 0.975 0.732 0.0
224056879398 Ca2+ antiporter/cation exchanger [Populu 0.870 0.997 0.796 0.0
297853280441 predicted protein [Arabidopsis lyrata su 0.942 0.975 0.730 0.0
356524415428 PREDICTED: vacuolar cation/proton exchan 0.927 0.988 0.741 0.0
255567156448 Vacuolar cation/proton exchanger, putati 0.940 0.957 0.722 1e-180
297829868441 hypothetical protein ARALYDRAFT_897557 [ 0.940 0.972 0.713 1e-179
>gi|359494235|ref|XP_002269027.2| PREDICTED: vacuolar cation/proton exchanger 5-like [Vitis vinifera] gi|296089995|emb|CBI39814.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  673 bits (1736), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 335/436 (76%), Positives = 377/436 (86%), Gaps = 6/436 (1%)

Query: 13  NLEMGSLDDRSMHEFEDESLFTPEAESEKIQRVHGLQNGSVSGDFPSSGNKILQNSVCRS 72
           N+EMGSL++RS HE EDESL +P    +K    H  Q GS   D+    +K+L N+V  S
Sbjct: 11  NMEMGSLEERSNHELEDESLISPAKIGQKTNSFHAPQLGSSCRDWRIWSSKLLGNAVFMS 70

Query: 73  IKTVVFSNKLNLLMPFGPLAIMVHNLTGHKGWVFFLSLLGITPLAERLGYATEQLTFFTG 132
           I+ VVFS+KLNLLMPFGPLA++VH L+ H GWVFFL+LLGITPLAERLGYATEQL+F+TG
Sbjct: 71  IRVVVFSSKLNLLMPFGPLAVLVHGLSDHNGWVFFLTLLGITPLAERLGYATEQLSFYTG 130

Query: 133 ATVGGLLNATFGNATELIISIYALKSGMIRVVQLSLLGSILSNMLLVLGCAFFCGGLICC 192
            TVGGLLNATFGNATELIISIYALKSGMIRVVQ SLLGSILSNMLLVLGCAFFCGG++  
Sbjct: 131 DTVGGLLNATFGNATELIISIYALKSGMIRVVQQSLLGSILSNMLLVLGCAFFCGGIVFN 190

Query: 193 KKEQVFNKASAVVNSGLLLMAVMGLVFPAVLHYTHTEVHFGKSELALSRFSSCIMLVAYG 252
            K+QVFNKA AV+NSGLLLMAVMGL+FPAVLH+THTEVHFG+SELALSRFSSCIML+AY 
Sbjct: 191 NKQQVFNKAIAVLNSGLLLMAVMGLLFPAVLHFTHTEVHFGRSELALSRFSSCIMLLAYA 250

Query: 253 AYLFFQLRGQTELYVPLSEDENQTGNDADHGGNHDDNEAPEISKWESLIWLAIMTAWISI 312
            YL FQL+ Q +LY+ ++E     G   + G   DD+E PEISKWES+IWL+I+TAWI+I
Sbjct: 251 GYLVFQLKSQKDLYMSIAEG----GTLPEEGS--DDDEGPEISKWESVIWLSILTAWIAI 304

Query: 313 LSQYVVDAIEGASASWNIPISFISVILLPIVGNAAEHASAIMFAMKDKLDISLGVAIGSS 372
           LS+Y+VDAIEGAS +W +P+SFISVILLPIVGNAAEHASAIMFAMKDKLDISLGVAIGSS
Sbjct: 305 LSEYLVDAIEGASIAWKMPVSFISVILLPIVGNAAEHASAIMFAMKDKLDISLGVAIGSS 364

Query: 373 TQISMFGIPFCVVIGWIMGRPMDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLMLIL 432
           TQISMF IPFCVVIGWIMG PMDLNFQLFETATLFITV+VVAF LQEGTSNYFKGLMLIL
Sbjct: 365 TQISMFAIPFCVVIGWIMGCPMDLNFQLFETATLFITVLVVAFLLQEGTSNYFKGLMLIL 424

Query: 433 CYLIVAASFFVHEDPT 448
           CYLIVAASFFVH DPT
Sbjct: 425 CYLIVAASFFVHVDPT 440




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|380039664|gb|AFD32370.1| CAX2 transporter [Sedum alfredii] Back     alignment and taxonomy information
>gi|380039662|gb|AFD32369.1| CAX2 transporter [Sedum alfredii] Back     alignment and taxonomy information
>gi|359485864|ref|XP_002266383.2| PREDICTED: vacuolar cation/proton exchanger 5-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|30696001|ref|NP_175969.2| vacuolar cation/proton exchanger 5 [Arabidopsis thaliana] gi|79320047|ref|NP_001031196.1| vacuolar cation/proton exchanger 5 [Arabidopsis thaliana] gi|75154113|sp|Q8L783.1|CAX5_ARATH RecName: Full=Vacuolar cation/proton exchanger 5; AltName: Full=Ca(2+)/H(+) antiporter CAX5; AltName: Full=Ca(2+)/H(+) exchanger 5; AltName: Full=Protein CATION EXCHANGER 5 gi|22531156|gb|AAM97082.1| H+/Ca2+ antiporter, putative [Arabidopsis thaliana] gi|30387539|gb|AAP31935.1| At1g55730 [Arabidopsis thaliana] gi|222424383|dbj|BAH20147.1| AT1G55730 [Arabidopsis thaliana] gi|332195169|gb|AEE33290.1| vacuolar cation/proton exchanger 5 [Arabidopsis thaliana] gi|332195170|gb|AEE33291.1| vacuolar cation/proton exchanger 5 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|224056879|ref|XP_002299069.1| Ca2+ antiporter/cation exchanger [Populus trichocarpa] gi|222846327|gb|EEE83874.1| Ca2+ antiporter/cation exchanger [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297853280|ref|XP_002894521.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297340363|gb|EFH70780.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|356524415|ref|XP_003530824.1| PREDICTED: vacuolar cation/proton exchanger 5-like [Glycine max] Back     alignment and taxonomy information
>gi|255567156|ref|XP_002524559.1| Vacuolar cation/proton exchanger, putative [Ricinus communis] gi|223536112|gb|EEF37767.1| Vacuolar cation/proton exchanger, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|297829868|ref|XP_002882816.1| hypothetical protein ARALYDRAFT_897557 [Arabidopsis lyrata subsp. lyrata] gi|297328656|gb|EFH59075.1| hypothetical protein ARALYDRAFT_897557 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query456
TAIR|locus:2020462441 CAX5 "cation exchanger 5" [Ara 0.942 0.975 0.727 8.7e-166
TAIR|locus:2088130441 CAX2 "cation exchanger 2" [Ara 0.925 0.956 0.726 8.1e-163
TAIR|locus:2074348459 CAX3 "cation exchanger 3" [Ara 0.910 0.904 0.479 1.4e-94
ASPGD|ASPL0000052404434 vcxA [Emericella nidulans (tax 0.800 0.841 0.420 2.3e-71
GENEDB_PFALCIPARUM|PFF0170w441 PFF0170w "calcium antiporter, 0.416 0.430 0.383 4.7e-68
UNIPROTKB|C6KSN3441 PFF0170w "Calcium antiporter, 0.416 0.430 0.383 4.7e-68
CGD|CAL0005539416 VCX1 [Candida albicans (taxid: 0.861 0.944 0.4 5.6e-68
UNIPROTKB|G4NFU3 782 MGG_08710 "Vacuolar calcium io 0.460 0.268 0.426 8e-68
SGD|S000002286411 VCX1 "Vacuolar membrane antipo 0.811 0.900 0.409 9.2e-68
UNIPROTKB|G4NIP8611 MGG_04159 "Calcium-proton exch 0.423 0.315 0.417 4.2e-66
TAIR|locus:2020462 CAX5 "cation exchanger 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1613 (572.9 bits), Expect = 8.7e-166, P = 8.7e-166
 Identities = 321/441 (72%), Positives = 365/441 (82%)

Query:    11 ESNLEMGSLDDRSMHEFEDESLFTPEAESEKIQRVHGLQNGSVSGDFPSSGNKILQNSVC 70
             ++ +EMG ++D      E +SLF  + +S + +    ++ GS+S  F     K   NSV 
Sbjct:    11 QAQVEMGLVND-----VEHKSLFRRDTDSPERKAASLMEQGSLSASFRECSTKTPNNSVL 65

Query:    71 RSIKTVVFSNKLNLLMPFGPLAIMVHNLTGHKGWVFFLSLLGITPLAERLGYATEQLTFF 130
             +S K V+ SNKLNLL+PFGPLAI++H LT +KGW+F LSL+GITPLAERLGYATEQL  +
Sbjct:    66 QSFKIVILSNKLNLLLPFGPLAILLHYLTDNKGWIFLLSLVGITPLAERLGYATEQLACY 125

Query:   131 TGATVGGLLNATFGNATELIISIYALKSGMIRVVQLSLLGSILSNMLLVLGCAFFCGGLI 190
             TG+TVGGLLNATFGN TELIISI+ALKSGMIRVVQL+LLGSILSNMLLVLGCAFFCGGL+
Sbjct:   126 TGSTVGGLLNATFGNVTELIISIFALKSGMIRVVQLTLLGSILSNMLLVLGCAFFCGGLV 185

Query:   191 CCKKEQVFNKASAVVNSGLLLMAVMGLVFPAVLHYTHTEVHFGKSELALSRFSSCIMLVA 250
               +KEQVF+K +AVVNSGLLLMAVMGL+FPAVLHYTH+EVH G SELALSRFSSCIMLVA
Sbjct:   186 FSQKEQVFDKGNAVVNSGLLLMAVMGLLFPAVLHYTHSEVHAGSSELALSRFSSCIMLVA 245

Query:   251 YGAYLFFQLRGQTELYVPLSEDENQTXXXXXXXXXXXXXEAPEISKWESLIWLAIMTAWI 310
             Y AYLFFQL+ Q   Y PL+E+ NQ              E PEISKWE++IWL+I+TAW+
Sbjct:   246 YAAYLFFQLKSQPSSYTPLTEETNQNEETSDDD------EDPEISKWEAIIWLSILTAWV 299

Query:   311 SILSQYVVDAIEGASASWNIPISFISVILLPIVGNAAEHASAIMFAMKDKLDISLGVAIG 370
             S+LS Y+VDAIEGAS SW IPISFISVILLPIVGNAAEHA AIMFAMKDKLD+SLGVAIG
Sbjct:   300 SLLSGYLVDAIEGASVSWKIPISFISVILLPIVGNAAEHAGAIMFAMKDKLDLSLGVAIG 359

Query:   371 SSTQISMFGIPFCVVIGWIMGRPMDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLML 430
             SS QISMF +PFCVVIGW+MG  MDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLML
Sbjct:   360 SSIQISMFAVPFCVVIGWMMGAQMDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLML 419

Query:   431 ILCYLIVAASFFVHEDPTSDD 451
             ILCYLIVAASFFVHEDP  DD
Sbjct:   420 ILCYLIVAASFFVHEDPHQDD 440




GO:0006812 "cation transport" evidence=IEA;ISS
GO:0008324 "cation transmembrane transporter activity" evidence=IEA
GO:0015368 "calcium:cation antiporter activity" evidence=ISS
GO:0015491 "cation:cation antiporter activity" evidence=ISS;NAS
GO:0016021 "integral to membrane" evidence=IEA
GO:0055085 "transmembrane transport" evidence=IEA
TAIR|locus:2088130 CAX2 "cation exchanger 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2074348 CAX3 "cation exchanger 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ASPGD|ASPL0000052404 vcxA [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
GENEDB_PFALCIPARUM|PFF0170w PFF0170w "calcium antiporter, putative" [Plasmodium falciparum (taxid:5833)] Back     alignment and assigned GO terms
UNIPROTKB|C6KSN3 PFF0170w "Calcium antiporter, putative" [Plasmodium falciparum 3D7 (taxid:36329)] Back     alignment and assigned GO terms
CGD|CAL0005539 VCX1 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
UNIPROTKB|G4NFU3 MGG_08710 "Vacuolar calcium ion transporter" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
SGD|S000002286 VCX1 "Vacuolar membrane antiporter with Ca2+/H+ and K+/H+ exchange activity" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
UNIPROTKB|G4NIP8 MGG_04159 "Calcium-proton exchanger" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q39254CAX2_ARATHNo assigned EC number0.71360.94070.9727nono
Q8L783CAX5_ARATHNo assigned EC number0.73240.94290.9750yesno
Q5KQN0CAX2_ORYSJNo assigned EC number0.68790.89910.9382yesno
Q99385VCX1_YEASTNo assigned EC number0.38660.86180.9562yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00033462001
SubName- Full=Chromosome chr19 scaffold_66, whole genome shotgun sequence; (463 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query456
TIGR00846365 TIGR00846, caca2, calcium/proton exchanger 1e-115
TIGR00378349 TIGR00378, cax, calcium/proton exchanger (cax) 1e-93
COG0387368 COG0387, ChaA, Ca2+/H+ antiporter [Inorganic ion t 5e-86
pfam01699135 pfam01699, Na_Ca_ex, Sodium/calcium exchanger prot 5e-25
COG0530320 COG0530, ECM27, Ca2+/Na+ antiporter [Inorganic ion 7e-17
pfam01699135 pfam01699, Na_Ca_ex, Sodium/calcium exchanger prot 7e-15
TIGR00367307 TIGR00367, TIGR00367, K+-dependent Na+/Ca+ exchang 9e-09
PRK10599366 PRK10599, PRK10599, calcium/sodium:proton antiport 0.002
>gnl|CDD|129926 TIGR00846, caca2, calcium/proton exchanger Back     alignment and domain information
 Score =  341 bits (877), Expect = e-115
 Identities = 173/372 (46%), Positives = 239/372 (64%), Gaps = 11/372 (2%)

Query: 71  RSIKTVVFSNKLNLLMPFGPLAIMVHNLTGHKGWVFFLSLLGITPLAERLGYATEQLTFF 130
             ++ V+  + LN+L+ F P AI++      +  +F L+LLGI PLAER+ +ATEQL   
Sbjct: 5   SVLQEVILGSWLNILLIFVPAAIILGLWGWSQTVIFLLNLLGIIPLAERVSFATEQLAHR 64

Query: 131 TGATVGGLLNATFGNATELIISIYALKSGMIRVVQLSLLGSILSNMLLVLGCAFFCGGLI 190
            G T+GGLLNATFGNA ELIIS+ AL  G + VV+ SLLGSILSN+LLVLG + F GG I
Sbjct: 65  LGPTLGGLLNATFGNAVELIISLMALGEGKVEVVRASLLGSILSNLLLVLGLSLFLGG-I 123

Query: 191 CCKKEQVFNKASAVVNSGLLLMAVMGLVFPAVLHYTHTEVHFGKSELALSRFSSCIMLVA 250
              +EQ FN+ +A VNS LLL+A++ LV P  L             L LSR  + +ML+ 
Sbjct: 124 KNIREQRFNRGAAQVNSALLLLAILSLVLPLALPAGKPGQDS---ILGLSRGIAIVMLIL 180

Query: 251 YGAYLFFQLRGQTELYVPLSEDENQTGNDADHGGNHDDNEAPEISKWESLIWLAIMTAWI 310
           YGA+L FQL    +L+ P  E+ +   +D  H       E   IS W +  WL   T  +
Sbjct: 181 YGAFLVFQLVTHRQLFEP-QEEADSDYDDEVHE------EPTVISPWSAAAWLVGATIVV 233

Query: 311 SILSQYVVDAIEGASASWNIPISFISVILLPIVGNAAEHASAIMFAMKDKLDISLGVAIG 370
           ++L++Y+VD IE A  SW + ++FI VIL PIVGNAAEHA A++ A K+KLDI+LGVA+G
Sbjct: 234 ALLAEYLVDTIESAVESWGLSVAFIGVILAPIVGNAAEHAGAVIAAFKNKLDIALGVALG 293

Query: 371 SSTQISMFGIPFCVVIGWIMGRPMDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLML 430
           S+ QI++F +P  V++ W++G PMDLNF   ET  L ++V +    LQ+G SNY +G +L
Sbjct: 294 SALQIALFVVPVVVLVAWMLGIPMDLNFGAPETVALALSVFLTTITLQDGRSNYLEGAVL 353

Query: 431 ILCYLIVAASFF 442
           +  Y+I+A  FF
Sbjct: 354 LALYIIIAMLFF 365


The Ca2+:Cation Antiporter (CaCA) Family (TC 2.A.19)Proteins of the CaCA family are found ubiquitously, having been identified in animals, plants, yeast, archaea and widely divergent bacteria.All of the characterized animal proteins catalyze Ca2+:Na+ exchange although some also transport K+. The NCX1 plasma membrane protein exchanges 3 Na+ for 1 Ca2+. The E. coli ChaA protein catalyzes Ca2+:H+ antiport but may also catalyze Na+:H+ antiport. All remaining well-characterized members of the family catalyze Ca2+:H+ exchange.This model is generated from the calcium ion/proton exchangers of the CacA family [Transport and binding proteins, Cations and iron carrying compounds]. Length = 365

>gnl|CDD|129474 TIGR00378, cax, calcium/proton exchanger (cax) Back     alignment and domain information
>gnl|CDD|223464 COG0387, ChaA, Ca2+/H+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|216653 pfam01699, Na_Ca_ex, Sodium/calcium exchanger protein Back     alignment and domain information
>gnl|CDD|223604 COG0530, ECM27, Ca2+/Na+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|216653 pfam01699, Na_Ca_ex, Sodium/calcium exchanger protein Back     alignment and domain information
>gnl|CDD|232943 TIGR00367, TIGR00367, K+-dependent Na+/Ca+ exchanger related-protein Back     alignment and domain information
>gnl|CDD|182580 PRK10599, PRK10599, calcium/sodium:proton antiporter; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 456
KOG1397441 consensus Ca2+/H+ antiporter VCX1 and related prot 100.0
TIGR00378349 cax calcium/proton exchanger (cax). 100.0
TIGR00846365 caca2 calcium/proton exchanger. This model is gene 100.0
COG0387368 ChaA Ca2+/H+ antiporter [Inorganic ion transport a 100.0
PRK10599366 calcium/sodium:proton antiporter; Provisional 100.0
PRK10734325 putative calcium/sodium:proton antiporter; Provisi 100.0
TIGR00367307 K+-dependent Na+/Ca+ exchanger related-protein. Th 100.0
COG0530320 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport 100.0
TIGR009271096 2A1904 K+-dependent Na+/Ca+ exchanger. 99.98
KOG1307588 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 an 99.97
PLN03151650 cation/calcium exchanger; Provisional 99.94
PRK10734 325 putative calcium/sodium:proton antiporter; Provisi 99.81
TIGR00367 307 K+-dependent Na+/Ca+ exchanger related-protein. Th 99.77
KOG2399605 consensus K+-dependent Na+:Ca2+ antiporter [Inorga 99.76
PF01699140 Na_Ca_ex: Sodium/calcium exchanger protein; InterP 99.74
TIGR00927 1096 2A1904 K+-dependent Na+/Ca+ exchanger. 99.73
COG0530 320 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport 99.71
KOG1307588 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 an 99.56
PLN03151 650 cation/calcium exchanger; Provisional 99.56
PF01699140 Na_Ca_ex: Sodium/calcium exchanger protein; InterP 99.46
TIGR00845928 caca sodium/calcium exchanger 1. This model is spe 99.46
TIGR00378 349 cax calcium/proton exchanger (cax). 99.45
TIGR00846 365 caca2 calcium/proton exchanger. This model is gene 99.44
TIGR00845928 caca sodium/calcium exchanger 1. This model is spe 99.29
PRK10599366 calcium/sodium:proton antiporter; Provisional 98.43
KOG2399 605 consensus K+-dependent Na+:Ca2+ antiporter [Inorga 98.43
COG0387368 ChaA Ca2+/H+ antiporter [Inorganic ion transport a 97.79
KOG1306596 consensus Ca2+/Na+ exchanger NCX1 and related prot 97.58
KOG1306596 consensus Ca2+/Na+ exchanger NCX1 and related prot 97.5
KOG1397 441 consensus Ca2+/H+ antiporter VCX1 and related prot 97.2
PRK10929 1109 putative mechanosensitive channel protein; Provisi 87.0
>KOG1397 consensus Ca2+/H+ antiporter VCX1 and related proteins [Inorganic ion transport and metabolism] Back     alignment and domain information
Probab=100.00  E-value=3.4e-90  Score=680.09  Aligned_cols=393  Identities=59%  Similarity=0.950  Sum_probs=360.2

Q ss_pred             CCCCCCCCCCCCccccchHHHhhhhhhhhhchhHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012798           49 QNGSVSGDFPSSGNKILQNSVCRSIKTVVFSNKLNLLMPFGPLAIMVHNLTGHKGWVFFLSLLGITPLAERLGYATEQLT  128 (456)
Q Consensus        49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Ll~~vP~~~~~~~~~~~~~~vF~~~~laiipla~~l~~~~e~la  128 (456)
                      +++++....++.+|+..+ .+...+|++++++++|.++||+|+++..||.+|++.|+|.+|+++|+|+|++++++|||+|
T Consensus        43 ~~k~~l~~~~~~~w~~~k-~~~~~l~~Vll~~~l~~lf~f~pl~~~~h~~~~s~~~vF~lsll~iiPLA~~l~~ateqls  121 (441)
T KOG1397|consen   43 EKKSLLSLIKHAPWKYLK-NVLTNLQEVLLSTKLNLLFPFVPLAIIAHWFTWSKGWVFLLSLLGIIPLAERLGFATEQLS  121 (441)
T ss_pred             hhccchhhhhhhhhHHHH-HHHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccchHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence            444444444455666666 5899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcchhHHHHHHHhhchhHHHHHHHHhhcCCceeeeecchhhHHHHHHHHHHHHHHhccceeecceeEeehhhhHHHHH
Q 012798          129 FFTGATVGGLLNATFGNATELIISIYALKSGMIRVVQLSLLGSILSNMLLVLGCAFFCGGLICCKKEQVFNKASAVVNSG  208 (456)
Q Consensus       129 ~~~g~~vgGll~at~Gn~pELivsi~Al~~g~~~iv~gsilGSil~nllLvlG~~~l~gg~~~~~~~q~f~~~~a~~~s~  208 (456)
                      .++|+++||++||+|||+.|+|++++|+++|+.++||++++||+++|+|||+|+|+++||++  ||+|+||++.+++++.
T Consensus       122 ~~tg~tvGgllNAtfGnaiElii~ilALk~g~~riVq~SlLGSILsnlLLvlG~s~~~Ggi~--rk~Q~Fn~~~A~v~s~  199 (441)
T KOG1397|consen  122 AYTGPTVGGLLNATFGNAIELIIYILALKNGKVRIVQGSLLGSILSNLLLVLGLSLFCGGIR--RKDQRFNIKSAGVNSA  199 (441)
T ss_pred             hhcCCcHHHHHhhhhccHHHHHHHHHHhhcCceEEEehhhHHHHHHHHHHHhhHHHhhcccc--cceeecccchhhHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999996  7899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhhccccc----cCccccccchhhHHHHHHHHHHHHHHHHHhcc--ccccCcccccccCCCCCCC
Q 012798          209 LLLMAVMGLVFPAVLHYTHTEVH----FGKSELALSRFSSCIMLVAYGAYLFFQLRGQT--ELYVPLSEDENQTGNDADH  282 (456)
Q Consensus       209 lllla~~~lllp~~~~~~~~~~~----~~~~~~~lSr~~siiLL~~Y~~yl~f~l~th~--~~f~~~~e~~~~~~~~~~~  282 (456)
                      +++++++++++|+++++++++..    .++..+.+||++|++|++.|++|++||+|||+  ..+..++|+++     +.+
T Consensus       200 lLl~a~l~~l~P~~l~~~~~~~~~~~~~~~~~l~lSr~~SivmliaYi~~L~FqL~t~~h~~~~~~~~ee~~-----~~d  274 (441)
T KOG1397|consen  200 LLLLAVLGILLPTVLHYTYGGEVHDCSSGGAILPLSRGCSIVMLIAYIAYLWFQLKTARHIWQFPTPDEEET-----EQD  274 (441)
T ss_pred             HHHHHHHHHHHHHHHHHhcCccccccCCccceeeehhccHHHHHHHHHHHHHHhhhcccccCCCCCCChhcc-----ccc
Confidence            99999999999999999987442    23457899999999999999999999999966  44544333221     111


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhhhHhHHHHhhchhHHHHHHHHHHhCCcc
Q 012798          283 GGNHDDNEAPEISKWESLIWLAIMTAWISILSQYVVDAIEGASASWNIPISFISVILLPIVGNAAEHASAIMFAMKDKLD  362 (456)
Q Consensus       283 ~~~~~~~e~~~~s~~~ai~~L~~~~~li~~~a~~lV~si~~i~~~~gis~~fiGlillpi~ts~pE~~~ai~~a~kg~~d  362 (456)
                      ++..++||.|+|++|++++||++.|++++++|||+|+++|++++++|+|++|+|+|++|+++|++||++||.+|.|||+|
T Consensus       275 ~~~s~~~e~p~is~~ss~~~L~~~T~~vsllaeyLV~~Id~~~ds~~ls~~FiglillpiVgNaaEh~~AI~fA~k~kld  354 (441)
T KOG1397|consen  275 DEVSNEDEAPNISRWSSIIWLLIMTLLVSLLAEYLVDTIDDVSDSWGLSVKFIGLILLPIVGNAAEHAGAISFAMKDKLD  354 (441)
T ss_pred             ccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhheeeeecccCchHHhhcceeeeecCccc
Confidence            22223677899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             chHHHhhhHHHHHHHHHHHHHHHHHhhcCCcccccchhHHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHHHHHHHh
Q 012798          363 ISLGVAIGSSTQISMFGIPFCVVIGWIMGRPMDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLMLILCYLIVAASFF  442 (456)
Q Consensus       363 laig~~iGS~i~~~l~v~p~~vli~~~~g~~~~l~f~~~~~~~l~lsvll~~~~~~~g~~~~~~G~~Ll~~Y~i~~~~~~  442 (456)
                      +++|+++||++|+++|++|++++++|++|++|+++|+.+|+.++++++++++|+++||++||++|.+|+++|++++++||
T Consensus       355 LslgVaigsalQI~Lf~vP~~v~v~W~~g~~M~LnF~~~et~~l~isVfl~~y~lqdG~Sny~kG~mLll~Y~Iia~~Ff  434 (441)
T KOG1397|consen  355 LSLGVAIGSALQIALFVVPFSVIVGWIMGISMDLNFPLLETACLFISVFLVAYLLQDGKSNYFKGLMLLLCYLIIAAGFF  434 (441)
T ss_pred             chhhhhhhhhHhHHHhhhhHHHHhhhhcCCceEEeccHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hccCCCC
Q 012798          443 VHEDPTS  449 (456)
Q Consensus       443 ~~~~~~~  449 (456)
                      ++++|..
T Consensus       435 ~~~~~~~  441 (441)
T KOG1397|consen  435 VYNDPSQ  441 (441)
T ss_pred             ccCCCCC
Confidence            9999963



>TIGR00378 cax calcium/proton exchanger (cax) Back     alignment and domain information
>TIGR00846 caca2 calcium/proton exchanger Back     alignment and domain information
>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK10599 calcium/sodium:proton antiporter; Provisional Back     alignment and domain information
>PRK10734 putative calcium/sodium:proton antiporter; Provisional Back     alignment and domain information
>TIGR00367 K+-dependent Na+/Ca+ exchanger related-protein Back     alignment and domain information
>COG0530 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger Back     alignment and domain information
>KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>PLN03151 cation/calcium exchanger; Provisional Back     alignment and domain information
>PRK10734 putative calcium/sodium:proton antiporter; Provisional Back     alignment and domain information
>TIGR00367 K+-dependent Na+/Ca+ exchanger related-protein Back     alignment and domain information
>KOG2399 consensus K+-dependent Na+:Ca2+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF01699 Na_Ca_ex: Sodium/calcium exchanger protein; InterPro: IPR004837 The sodium/calcium exchangers are a family of integral membrane proteins Back     alignment and domain information
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger Back     alignment and domain information
>COG0530 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>PLN03151 cation/calcium exchanger; Provisional Back     alignment and domain information
>PF01699 Na_Ca_ex: Sodium/calcium exchanger protein; InterPro: IPR004837 The sodium/calcium exchangers are a family of integral membrane proteins Back     alignment and domain information
>TIGR00845 caca sodium/calcium exchanger 1 Back     alignment and domain information
>TIGR00378 cax calcium/proton exchanger (cax) Back     alignment and domain information
>TIGR00846 caca2 calcium/proton exchanger Back     alignment and domain information
>TIGR00845 caca sodium/calcium exchanger 1 Back     alignment and domain information
>PRK10599 calcium/sodium:proton antiporter; Provisional Back     alignment and domain information
>KOG2399 consensus K+-dependent Na+:Ca2+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG1306 consensus Ca2+/Na+ exchanger NCX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>KOG1306 consensus Ca2+/Na+ exchanger NCX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>KOG1397 consensus Ca2+/H+ antiporter VCX1 and related proteins [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK10929 putative mechanosensitive channel protein; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query456
3v5u_A320 Uncharacterized membrane protein MJ0091; lipid cub 5e-11
>3v5u_A Uncharacterized membrane protein MJ0091; lipid cubic phase, cation protein complex, sodium,calcium EX membrane protein; HET: OLC MYS 1PE; 1.90A {Methanocaldococcus jannaschii} PDB: 3v5s_A* Length = 320 Back     alignment and structure
 Score = 62.6 bits (153), Expect = 5e-11
 Identities = 47/295 (15%), Positives = 103/295 (34%), Gaps = 60/295 (20%)

Query: 148 ELIISIYALKSGMIRVVQLSLLGSILSNMLLVLGCAFFCGGLICCKKEQVFNKASAVVNS 207
           E++ S YA       +   + +GS + N+ LVLG +     +I             +  +
Sbjct: 54  EILTSAYASYMHAPGISIGNAIGSCICNIGLVLGLSAIISPIIV---------DKNLQKN 104

Query: 208 GLLLMAVMGLVFPAVLHYTHTEVHFGKSELALSRFSSCIMLVAYGAYLFFQLRGQTELYV 267
            L+ +  +       +                S     ++L+ +  YL + ++  +    
Sbjct: 105 ILVYLLFVIFAAVIGIDG-------------FSWIDGVVLLILFIIYLRWTVKNGSA--- 148

Query: 268 PLSEDENQTGNDADHGGNHDDNEAPEISKWESLIWLAIMTAWISILSQYVVDAIEGASAS 327
                              ++N+    S   SL+ L I    + + ++  VD  +  + +
Sbjct: 149 ----------------EIEENNDKNNPSVVFSLVLLIIGLIGVLVGAELFVDGAKKIALA 192

Query: 328 WNIPISFISVIL------LPIVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQISMFGIP 381
            +I    I   L      LP      E   ++  A ++   + LG  IGS    ++  I 
Sbjct: 193 LDISDKVIGFTLVAFGTSLP------ELMVSLAAAKRNLGGMVLGNVIGS----NIADI- 241

Query: 382 FCVVIGWIMGRPMDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLMLILCYLI 436
               +  +    M L  +  + A L I  +++  F +      ++G++ +  Y+I
Sbjct: 242 -GGALA-VGSLFMHLPAENVQMAVLVIMSLLLYLFAKYSKIGRWQGILFLALYII 294


Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query456
3v5u_A320 Uncharacterized membrane protein MJ0091; lipid cub 100.0
3v5u_A 320 Uncharacterized membrane protein MJ0091; lipid cub 99.82
>3v5u_A Uncharacterized membrane protein MJ0091; lipid cubic phase, cation protein complex, sodium,calcium EX membrane protein; HET: OLC MYS 1PE; 1.90A {Methanocaldococcus jannaschii} PDB: 3v5s_A* Back     alignment and structure
Probab=100.00  E-value=6e-48  Score=386.59  Aligned_cols=294  Identities=18%  Similarity=0.195  Sum_probs=245.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--chhHHHHHHHhh-chhHHHHHHHHhhcCCceeeeecchhhHHHHHHHH
Q 012798          103 GWVFFLSLLGITPLAERLGYATEQLTFFTG--ATVGGLLNATFG-NATELIISIYALKSGMIRVVQLSLLGSILSNMLLV  179 (456)
Q Consensus       103 ~~vF~~~~laiipla~~l~~~~e~la~~~g--~~vgGll~at~G-n~pELivsi~Al~~g~~~iv~gsilGSil~nllLv  179 (456)
                      ...|+.++++++++++++++++|++|+++|  |.+.|++++++| |+||+++++.|..+|++|+++||++|||++|++++
T Consensus         6 ~~~l~~g~~~l~~~a~~lv~~~~~la~~lgis~~viGltiva~GTSlPEl~vsi~A~~~g~~diaiGnivGSni~nillv   85 (320)
T 3v5u_A            6 VGYFLLGLILLYYGSDWFVLGSERIARHFNVSNFVIGATVMAIGTSLPEILTSAYASYMHAPGISIGNAIGSCICNIGLV   85 (320)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTBCHHHHHHTHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHcccHHHHHHHHHHhCCCCceeeeeecchHHHHHHHH
Confidence            456889999999999999999999999997  999999999999 69999999999999999999999999999999999


Q ss_pred             HHHHHHhccceeecceeEeehhhhHHHHHHHHHHHHHHHHHHHHhhhccccccCccccccchhhHHHHHHHHHHHHHHHH
Q 012798          180 LGCAFFCGGLICCKKEQVFNKASAVVNSGLLLMAVMGLVFPAVLHYTHTEVHFGKSELALSRFSSCIMLVAYGAYLFFQL  259 (456)
Q Consensus       180 lG~~~l~gg~~~~~~~q~f~~~~a~~~s~lllla~~~lllp~~~~~~~~~~~~~~~~~~lSr~~siiLL~~Y~~yl~f~l  259 (456)
                      +|+|+++++++.   ++.+.++     ..+++++++. +++  +.          .++ ++|++|++|+.+|+.|++|++
T Consensus        86 lG~~~li~p~~v---~~~~~~d-----~~~~l~~~~~-l~~--~~----------~~g-is~~~g~~Ll~~Y~~yl~~~~  143 (320)
T 3v5u_A           86 LGLSAIISPIIV---DKNLQKN-----ILVYLLFVIF-AAV--IG----------IDG-FSWIDGVVLLILFIIYLRWTV  143 (320)
T ss_dssp             HHHHHHHSCBCC---CHHHHHH-----HHHHHHHHHH-HHH--HT----------TTC-BCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHccccc---cHHHHHH-----HHHHHHHHHH-HHH--HH----------Hcc-cHHHHHHHHHHHHHHHHHHHH
Confidence            999999999764   2223333     3334443322 222  11          124 999999999999999999999


Q ss_pred             HhccccccCcccccccCCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhhhHhH
Q 012798          260 RGQTELYVPLSEDENQTGNDADHGGNHDDNEAPEISKWESLIWLAIMTAWISILSQYVVDAIEGASASWNIPISFISVIL  339 (456)
Q Consensus       260 ~th~~~f~~~~e~~~~~~~~~~~~~~~~~~e~~~~s~~~ai~~L~~~~~li~~~a~~lV~si~~i~~~~gis~~fiGlil  339 (456)
                      ++|++.     +            |  +++++++.+.++.+.+++++++++..+++++|++++.+++.+|+|+.++|+|+
T Consensus       144 ~~~~~~-----~------------~--~~~~~~~~~~~~~~~~l~~~l~~l~~~a~~lv~~~~~ia~~~gis~~~iGltl  204 (320)
T 3v5u_A          144 KNGSAE-----I------------E--ENNDKNNPSVVFSLVLLIIGLIGVLVGAELFVDGAKKIALALDISDKVIGFTL  204 (320)
T ss_dssp             HHTBC--------------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHT
T ss_pred             Hhcccc-----c------------c--cccccccccHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHhCCchHHHHHHH
Confidence            988741     1            1  11122356778899999999999999999999999999999999999999999


Q ss_pred             HHHhhchhHHHHHHHHHHhCCccchHHHhhhHHHHHHHHHHHHHHHHHhhcCCcccccchhHHHHHHHHHHHHHHHHHhC
Q 012798          340 LPIVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQISMFGIPFCVVIGWIMGRPMDLNFQLFETATLFITVIVVAFFLQE  419 (456)
Q Consensus       340 lpi~ts~pE~~~ai~~a~kg~~dlaig~~iGS~i~~~l~v~p~~vli~~~~g~~~~l~f~~~~~~~l~lsvll~~~~~~~  419 (456)
                      +|++||+||+++++.+++||+.|+|+|+++|||+||.++++|+..++     .|++++  .+|...++...+++..+++|
T Consensus       205 va~gtslPE~~~sv~aa~~g~~~laig~iiGS~ifn~~~v~g~~~li-----~p~~~~--~~d~~~~l~~~~ll~~~~~~  277 (320)
T 3v5u_A          205 VAFGTSLPELMVSLAAAKRNLGGMVLGNVIGSNIADIGGALAVGSLF-----MHLPAE--NVQMAVLVIMSLLLYLFAKY  277 (320)
T ss_dssp             HHHHHTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTHHHHHHHH-----SCBCCC--HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhccHHHHHHHHHHHcCCCcHHHHHHHhHHHHHHHHHHHHHHhh-----ccccch--HHHHHHHHHHHHHHHHHHhC
Confidence            99999999999999999999999999999999999999999998887     466654  66764443333333347789


Q ss_pred             CccchHHHHHHHHHHHH-HHHHHhhc
Q 012798          420 GTSNYFKGLMLILCYLI-VAASFFVH  444 (456)
Q Consensus       420 g~~~~~~G~~Ll~~Y~i-~~~~~~~~  444 (456)
                      ||++|+||.+|+++|++ |....+..
T Consensus       278 ~~i~~~eG~~ll~~Y~~~y~~~~~~~  303 (320)
T 3v5u_A          278 SKIGRWQGILFLALYIIAIASLRMGG  303 (320)
T ss_dssp             SCBSHHHHHHHHHHHHHHHHHSCSSC
T ss_pred             CcCcHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999 99887653



>3v5u_A Uncharacterized membrane protein MJ0091; lipid cubic phase, cation protein complex, sodium,calcium EX membrane protein; HET: OLC MYS 1PE; 1.90A {Methanocaldococcus jannaschii} PDB: 3v5s_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00