Citrus Sinensis ID: 012806

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450------
Protein Sequence
MAAARRISTLLSRSFPSASPSLLRSLGRESSRARGISRFSTAAVVEEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQFLIPIFSFIILCVVTDCTSIK
Secondary Structure (PSIPRED)
cccccccHHHHHHccccccHHHHHHHcccccccccccccccccccccccccccccccccEEEccEEcccccccEEcccccccccEEEEEccccHHcHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHcccccccccccccHHHHHHHHHHHHccccccccccccccccEEEEEEccccEEEEEEccccHHHHHHHHHHHHHHHcccEEEEEcccccccHHHHHHHHHHHHccccccEEEcccccHHHHHHHHHcccccEEEccccHHHHHHHHHHHHHcccccEEEEccccccccccccccHHHHHHHHHHHHHcccccccccccEEEEEcccHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHcccEEEEcccccccccEEEcccEEcccccccEEcccccccEEEEcccccccHHHccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHccccccHHHHHHHHcccccccccHccccccccccccccccccccccEEEccEEEccccccEEEEEccccccEEEEEEcccHHHHHHHHHHHHHHccccHHHHccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHcccHHHHHHcHHHHHHHHHHHHHHHHHHccEEEEcccccEEEEEEEEEccEEEEEcccccHHHHHHHHHHHHHHcccEEEEEccccccHHHHHHHHHHHHHccccccEEEccEccccHHHHHHccccccEEEEEccHHHHHHHHHHHHHccccEEEEEcccccEEEEcccccHHHHHHHHHHHHHcccccccccccEEEEEHHHHHHHHHHHHHHcccccEcccccccccEcccccHHHHHHHHHHHHHHHHcccEEcccccEEcccccEEccEEEEccccHHHHHHHHcccHHHHEccccHHHHHEcc
Coil and Loop (DISEMBL)
MAAARRISTLLsrsfpsaspsLLRSLGressrargisrfstaavveepiippvqisytknlingqfvdaasgktfpvydprtAEVIANVAEGDAEDIDRAVATARkafdegpwpkmtpyeRSRIMLRAADLIEKNMEELAALEtwnngkpyvqslksEVPMVVRLLHYYAGwadkihgltvpgdgnyhiqtlhepigvagqivpwnfplLLFTwkvapaltcgntivlksaeqtpLTALYVAKLfheaglppgvlnvvsgygptaGAALAshmdvdklsftghcdtGKIVQELAaksnlkpvtlelggkspfiifddaDVDQAVELAHFALFYnqgqcccagsrtyvheRVYDEFVEKAKARAMRRivgdpfksgveqgpqidpeQFQKVLRYIRSgiesnatlecggdrlgnrgyfvqptvfsDVTVSFISLLQFLIPIFSFIILCVVTDCTSIK
Flexible Loop (DISEMBL)
maaarristllsrsfpsaspslLRSLGRESSRARGISRfstaavveepiipPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATarkafdegpwpkmtpyerSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGdpfksgveqgpqidpeqFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQFLIPIFSFIILCVVTDCTSIK
Low Complexity Region (SEG)
MAAARRISTLLSRSFPSAspsllrslgressrARGISRFSTAAVVEEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQFLIPIFSFIILCVVTDCTSIK
Disordered region (IsUnstruct)
**************************************FSTAAVVEEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPF*************QFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQFLIPIFSFIILCVVTDCT***
Disordered Region (DISOPRED)
**************FPSAS*****************************IIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQFLIPIFSFIILCVVTDCTSIK
Disordered Region (DISEMBL)
MAAARRISTLLSRSFP*******************ISRFSTAAVVEEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQFLIPIFSFIILCVVTDCTSIK
Disordered Region (DISPRO)
**********************************************EPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQFLIPIFSFIILCVVTDCTSIK
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAAARRISTLLSRSFPSASPSLLRSLGRESSRARGISRFSTAAVVEEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQFLIPIFSFIILCVVTDCTSIK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	456	2.2.26 [Sep-21-2011]
Q9SU63	538	Aldehyde dehydrogenase fa	yes	no	0.929	0.788	0.743	0.0
Q8S528	534	Aldehyde dehydrogenase fa	no	no	0.861	0.735	0.736	0.0
P20000	520	Aldehyde dehydrogenase, m	yes	no	0.817	0.717	0.612	1e-135
Q2XQV4	521	Aldehyde dehydrogenase, m	yes	no	0.817	0.715	0.614	1e-135
P11884	519	Aldehyde dehydrogenase, m	yes	no	0.888	0.780	0.575	1e-134
P47738	519	Aldehyde dehydrogenase, m	yes	no	0.888	0.780	0.575	1e-133
Q5RF00	517	Aldehyde dehydrogenase, m	yes	no	0.881	0.777	0.569	1e-133
P05091	517	Aldehyde dehydrogenase, m	yes	no	0.881	0.777	0.569	1e-133
P81178	500	Aldehyde dehydrogenase, m	N/A	no	0.802	0.732	0.615	1e-133
Q62148	518	Retinal dehydrogenase 2 O	no	no	0.826	0.727	0.574	1e-133

>sp|Q9SU63|AL2B4_ARATH Aldehyde dehydrogenase family 2 member B4, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B4 PE=1 SV=1

 Score =  691 bits (1782), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/425 (74%), Positives = 371/425 (87%), Gaps = 1/425 (0%)

Query: 3   AARRISTLLSRSFPSASPSLLRSLGRESSRARGISRFSTA-AVVEEPIIPPVQISYTKNL 61
           AARR+S+LLSRSF ++SP L RS GR       + RF T+ A  EE I P VQ+S+T+ L
Sbjct: 2   AARRVSSLLSRSFSASSPLLFRSQGRNCYNGGILRRFGTSSAAAEEIINPSVQVSHTQLL 61

Query: 62  INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYER 121
           ING FVD+ASGKTFP  DPRT EVIA+VAEGDAEDI+RAV  AR AFDEGPWPKM+ YER
Sbjct: 62  INGNFVDSASGKTFPTLDPRTGEVIAHVAEGDAEDINRAVKAARTAFDEGPWPKMSAYER 121

Query: 122 SRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTV 181
           SR++LR ADL+EK+ EELA+LETW+NGKPY QSL +E+PM  RL  YYAGWADKIHGLT+
Sbjct: 122 SRVLLRFADLVEKHSEELASLETWDNGKPYQQSLTAEIPMFARLFRYYAGWADKIHGLTI 181

Query: 182 PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYV 241
           P DGNY + TLHEPIGVAGQI+PWNFPLL+F WKV PAL CGNTIVLK+AEQTPLTA Y 
Sbjct: 182 PADGNYQVHTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLTAFYA 241

Query: 242 AKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKP 301
            KLF EAGLPPGVLN+VSG+G TAGAALASHMDVDKL+FTG  DTGK++  LAA SNLKP
Sbjct: 242 GKLFLEAGLPPGVLNIVSGFGATAGAALASHMDVDKLAFTGSTDTGKVILGLAANSNLKP 301

Query: 302 VTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKA 361
           VTLELGGKSPFI+F+DAD+D+AVELAHFALF+NQGQCCCAGSRT+VHE+VYDEFVEK+KA
Sbjct: 302 VTLELGGKSPFIVFEDADIDKAVELAHFALFFNQGQCCCAGSRTFVHEKVYDEFVEKSKA 361

Query: 362 RAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPT 421
           RA++R+VGDPF+ G+EQGPQID +QF+KV++YI+SGIESNATLECGGD++G++GYF+QPT
Sbjct: 362 RALKRVVGDPFRKGIEQGPQIDLKQFEKVMKYIKSGIESNATLECGGDQIGDKGYFIQPT 421

Query: 422 VFSDV 426
           VFS+V
Sbjct: 422 VFSNV 426

Possesses activity on acetaldehyde and glycolaldehyde in vitro.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 3

>sp|Q8S528|AL2B7_ARATH Aldehyde dehydrogenase family 2 member B7, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B7 PE=2 SV=2

 Score =  639 bits (1649), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 290/394 (73%), Positives = 345/394 (87%), Gaps = 1/394 (0%)

Query: 34  RGISRFST-AAVVEEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEG 92
           RG  R+S  AA VE  I PPV++ +T+ LI G+FVDA SGKTFP  DPR  EVIA V+EG
Sbjct: 29  RGAQRYSNLAAAVENTITPPVKVEHTQLLIGGRFVDAVSGKTFPTLDPRNGEVIAQVSEG 88

Query: 93  DAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYV 152
           DAED++RAVA ARKAFDEGPWPKMT YERS+I+ R ADLIEK+ +E+AALETW+NGKPY 
Sbjct: 89  DAEDVNRAVAAARKAFDEGPWPKMTAYERSKILFRFADLIEKHNDEIAALETWDNGKPYE 148

Query: 153 QSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLF 212
           QS + EVPM+ R+  YYAGWADKIHG+T+PGDG +H+QTLHEPIGVAGQI+PWNFPLL+ 
Sbjct: 149 QSAQIEVPMLARVFRYYAGWADKIHGMTMPGDGPHHVQTLHEPIGVAGQIIPWNFPLLML 208

Query: 213 TWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASH 272
           +WK+ PAL CGNT+VLK+AEQTPL+AL V KL HEAGLP GV+N+VSG+G TAGAA+ASH
Sbjct: 209 SWKLGPALACGNTVVLKTAEQTPLSALLVGKLLHEAGLPDGVVNIVSGFGATAGAAIASH 268

Query: 273 MDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALF 332
           MDVDK++FTG  D GKI+ ELA+KSNLK VTLELGGKSPFI+ +DADVDQAVELAHFALF
Sbjct: 269 MDVDKVAFTGSTDVGKIILELASKSNLKAVTLELGGKSPFIVCEDADVDQAVELAHFALF 328

Query: 333 YNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLR 392
           +NQGQCCCAGSRT+VHERVYDEFVEKAKARA++R VGDPFKSG+EQGPQ+D EQF K+L+
Sbjct: 329 FNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRNVGDPFKSGIEQGPQVDSEQFNKILK 388

Query: 393 YIRSGIESNATLECGGDRLGNRGYFVQPTVFSDV 426
           YI+ G+E+ ATL+ GGDRLG++GY++QPTVFSDV
Sbjct: 389 YIKHGVEAGATLQAGGDRLGSKGYYIQPTVFSDV 422

Possesses activity on acetaldehyde and glycolaldehyde in vitro.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

>sp|P20000|ALDH2_BOVIN Aldehyde dehydrogenase, mitochondrial OS=Bos taurus GN=ALDH2 PE=1 SV=2

 Score =  481 bits (1238), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 229/374 (61%), Positives = 279/374 (74%), Gaps = 1/374 (0%)

Query: 54  QISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-P 112
           ++ Y +  IN ++ DA S KTFP  +P T +VI +VAEGD  D+DRAV  AR AF  G P
Sbjct: 36  EVLYNQIFINNEWHDAVSKKTFPTVNPSTGDVICHVAEGDKADVDRAVKAARAAFQLGSP 95

Query: 113 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGW 172
           W +M   ER R++ R ADLIE++   LAALET +NGKPY+ S   ++ MV++ L YYAGW
Sbjct: 96  WRRMDASERGRLLNRLADLIERDRTYLAALETLDNGKPYIISYLVDLDMVLKCLRYYAGW 155

Query: 173 ADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAE 232
           ADK HG T+P DG+Y   T HEP+GV GQI+PWNFPLL+  WK+ PAL  GN +V+K AE
Sbjct: 156 ADKYHGKTIPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAE 215

Query: 233 QTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE 292
           QTPLTALYVA L  EAG PPGV+NV+ G+GPTAGAA+ASH DVDK++FTG  + G ++Q 
Sbjct: 216 QTPLTALYVANLIKEAGFPPGVVNVIPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQV 275

Query: 293 LAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVY 352
            A KSNLK VTLELGGKSP II  DAD+D AVE AHFALF+NQGQCCCAGSRT+V E +Y
Sbjct: 276 AAGKSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIY 335

Query: 353 DEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG 412
            EFVE++ ARA  R+VG+PF S  EQGPQ+D  QF+KVL YI+SG E  A L CGG    
Sbjct: 336 AEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKVLGYIKSGKEEGAKLLCGGGAAA 395

Query: 413 NRGYFVQPTVFSDV 426
           +RGYF+QPTVF DV
Sbjct: 396 DRGYFIQPTVFGDV 409

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

>sp|Q2XQV4|ALDH2_PIG Aldehyde dehydrogenase, mitochondrial OS=Sus scrofa GN=ALDH2 PE=2 SV=1

 Score =  480 bits (1236), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 230/374 (61%), Positives = 280/374 (74%), Gaps = 1/374 (0%)

Query: 54  QISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-P 112
           +I Y +  IN ++ DA S KTFP  +P T +VI +VAEGD ED+DRAV  AR AF  G P
Sbjct: 37  EIFYNQIFINNEWHDAISKKTFPTVNPSTGDVICHVAEGDKEDVDRAVEAARAAFQLGSP 96

Query: 113 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGW 172
           W ++   +R R++ R ADLIE++   LAALET +NGKPYV S   ++ MV++ L YYAGW
Sbjct: 97  WRRLDASDRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGW 156

Query: 173 ADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAE 232
           ADK HG T+P DG+Y   T HEP+GV GQI+PWNFPLL+  WK+ PAL  GN +V+K +E
Sbjct: 157 ADKYHGKTLPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVSE 216

Query: 233 QTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE 292
           QTPLTALYVA L  EAG PPGV+N+V GYGPTAGAA+ASH DVDK++FTG  + G ++Q 
Sbjct: 217 QTPLTALYVANLIKEAGFPPGVVNIVPGYGPTAGAAIASHEDVDKVAFTGSTEVGHLIQV 276

Query: 293 LAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVY 352
            A KSNLK VTLELGGKSP II  DAD+D AVE AHFALF+NQGQCCCAGSRT+V E +Y
Sbjct: 277 AAGKSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIY 336

Query: 353 DEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG 412
            EFVE++ ARA  R+VG+PF S  EQGPQID  QF+K+L YI+SG E  A L CGG    
Sbjct: 337 AEFVERSVARARSRVVGNPFDSRTEQGPQIDETQFKKILGYIKSGKEEGAKLLCGGGAAA 396

Query: 413 NRGYFVQPTVFSDV 426
           +RGYF+QPTVF DV
Sbjct: 397 DRGYFIQPTVFGDV 410

Is capable of converting retinaldehyde to retinoic acid.

Sus scrofa (taxid: 9823)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

>sp|P11884|ALDH2_RAT Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Aldh2 PE=1 SV=1

 Score =  479 bits (1232), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 235/408 (57%), Positives = 290/408 (71%), Gaps = 3/408 (0%)

Query: 22  LLRSLGRESSRARGISRFSTAAVVEEPIIPPVQISYTKN--LINGQFVDAASGKTFPVYD 79
           +LR+    + R   +SR  +AA       P  Q     N   IN ++ DA S KTFP  +
Sbjct: 1   MLRAALSTARRGPRLSRLLSAAATSAVPAPNQQPEVFCNQIFINNEWHDAVSKKTFPTVN 60

Query: 80  PRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEE 138
           P T EVI  VAEG+ ED+D+AV  A+ AF  G PW +M   +R R++ R ADLIE++   
Sbjct: 61  PSTGEVICQVAEGNKEDVDKAVKAAQAAFQLGSPWRRMDASDRGRLLYRLADLIERDRTY 120

Query: 139 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGV 198
           LAALET +NGKPYV S   ++ MV++ L YYAGWADK HG T+P DG++   T HEP+GV
Sbjct: 121 LAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGV 180

Query: 199 AGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVV 258
            GQI+PWNFPLL+  WK+ PAL  GN +V+K AEQTPLTALYVA L  EAG PPGV+N+V
Sbjct: 181 CGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIV 240

Query: 259 SGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDA 318
            G+GPTAGAA+ASH DVDK++FTG  + G ++Q  A  SNLK VTLELGGKSP II  DA
Sbjct: 241 PGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGSSNLKRVTLELGGKSPNIIMSDA 300

Query: 319 DVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQ 378
           D+D AVE AHFALF+NQGQCCCAGSRT+V E VYDEFVE++ ARA  R+VG+PF S  EQ
Sbjct: 301 DMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDVYDEFVERSVARAKSRVVGNPFDSRTEQ 360

Query: 379 GPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDV 426
           GPQ+D  QF+K+L YI+SG +  A L CGG    +RGYF+QPTVF DV
Sbjct: 361 GPQVDETQFKKILGYIKSGQQEGAKLLCGGGAAADRGYFIQPTVFGDV 408

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

>sp|P47738|ALDH2_MOUSE Aldehyde dehydrogenase, mitochondrial OS=Mus musculus GN=Aldh2 PE=1 SV=1

 Score =  476 bits (1225), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 235/408 (57%), Positives = 288/408 (70%), Gaps = 3/408 (0%)

Query: 22  LLRSLGRESSRARGISRFSTAAVVEEPIIPPVQISYTKN--LINGQFVDAASGKTFPVYD 79
           +LR+      R   +SR  +AA       P  Q     N   IN ++ DA S KTFP  +
Sbjct: 1   MLRAALTTVRRGPRLSRLLSAAATSAVPAPNHQPEVFCNQIFINNEWHDAVSRKTFPTVN 60

Query: 80  PRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEE 138
           P T EVI  VAEG+ ED+D+AV  AR AF  G PW +M   +R R++ R ADLIE++   
Sbjct: 61  PSTGEVICQVAEGNKEDVDKAVKAARAAFQLGSPWRRMDASDRGRLLYRLADLIERDRTY 120

Query: 139 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGV 198
           LAALET +NGKPYV S   ++ MV++ L YYAGWADK HG T+P DG++   T HEP+GV
Sbjct: 121 LAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGV 180

Query: 199 AGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVV 258
            GQI+PWNFPLL+  WK+ PAL  GN +V+K AEQTPLTALYVA L  EAG PPGV+N+V
Sbjct: 181 CGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIV 240

Query: 259 SGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDA 318
            G+GPTAGAA+ASH  VDK++FTG  + G ++Q  A  SNLK VTLELGGKSP II  DA
Sbjct: 241 PGFGPTAGAAIASHEGVDKVAFTGSTEVGHLIQVAAGSSNLKRVTLELGGKSPNIIMSDA 300

Query: 319 DVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQ 378
           D+D AVE AHFALF+NQGQCCCAGSRT+V E VYDEFVE++ ARA  R+VG+PF S  EQ
Sbjct: 301 DMDWAVEQAHFALFFNQGQCCCAGSRTFVQENVYDEFVERSVARAKSRVVGNPFDSRTEQ 360

Query: 379 GPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDV 426
           GPQ+D  QF+K+L YI+SG +  A L CGG    +RGYF+QPTVF DV
Sbjct: 361 GPQVDETQFKKILGYIKSGQQEGAKLLCGGGAAADRGYFIQPTVFGDV 408

Is capable of converting retinaldehyde to retinoic acid.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

>sp|Q5RF00|ALDH2_PONAB Aldehyde dehydrogenase, mitochondrial OS=Pongo abelii GN=ALDH2 PE=2 SV=1

 Score =  476 bits (1225), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 233/409 (56%), Positives = 290/409 (70%), Gaps = 7/409 (1%)

Query: 22  LLRSLGRESSRARGISRFSTAAVVEEPIIPPVQ---ISYTKNLINGQFVDAASGKTFPVY 78
           +LR+  R   R   + R   +A   + +  P Q   +   +  IN ++ DA S KTFP  
Sbjct: 1   MLRAAARFGPR---LGRRLLSAAATQAVPAPNQQPEVFCNQIFINNEWHDAVSRKTFPTV 57

Query: 79  DPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNME 137
           +P T EVI  VAEGD ED+D+AV  AR AF  G PW +M    R R++ R ADLIE++  
Sbjct: 58  NPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRT 117

Query: 138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIG 197
            LAALET +NGKPYV S   ++ MV++ L YYAGWADK HG T+P DG++   T HEP+G
Sbjct: 118 YLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVG 177

Query: 198 VAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNV 257
           V GQI+PWNFPLL+  WK+ PAL  GN +V+K AEQTPLTALYVA L  EAG PPGV+N+
Sbjct: 178 VCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNI 237

Query: 258 VSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDD 317
           V G+GPTAGAA+ASH DVDK++FTG  + G+++Q  A  SNLK VTLELGGKSP II  D
Sbjct: 238 VPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSD 297

Query: 318 ADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVE 377
           AD+D AVE AHFALF+NQGQCCCAGSRT+V E +YDEFVE++ ARA  R+VG+PF S  E
Sbjct: 298 ADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTE 357

Query: 378 QGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDV 426
           QGPQ+D  QF+K+L YI +G +  A L CGG    +RGYF+QPTVF DV
Sbjct: 358 QGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDV 406

Is capable of converting retinaldehyde to retinoic acid.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

>sp|P05091|ALDH2_HUMAN Aldehyde dehydrogenase, mitochondrial OS=Homo sapiens GN=ALDH2 PE=1 SV=2

 Score =  476 bits (1225), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 233/409 (56%), Positives = 290/409 (70%), Gaps = 7/409 (1%)

Query: 22  LLRSLGRESSRARGISRFSTAAVVEEPIIPPVQ---ISYTKNLINGQFVDAASGKTFPVY 78
           +LR+  R   R   + R   +A   + +  P Q   +   +  IN ++ DA S KTFP  
Sbjct: 1   MLRAAARFGPR---LGRRLLSAAATQAVPAPNQQPEVFCNQIFINNEWHDAVSRKTFPTV 57

Query: 79  DPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNME 137
           +P T EVI  VAEGD ED+D+AV  AR AF  G PW +M    R R++ R ADLIE++  
Sbjct: 58  NPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRT 117

Query: 138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIG 197
            LAALET +NGKPYV S   ++ MV++ L YYAGWADK HG T+P DG++   T HEP+G
Sbjct: 118 YLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVG 177

Query: 198 VAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNV 257
           V GQI+PWNFPLL+  WK+ PAL  GN +V+K AEQTPLTALYVA L  EAG PPGV+N+
Sbjct: 178 VCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNI 237

Query: 258 VSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDD 317
           V G+GPTAGAA+ASH DVDK++FTG  + G+++Q  A  SNLK VTLELGGKSP II  D
Sbjct: 238 VPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSD 297

Query: 318 ADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVE 377
           AD+D AVE AHFALF+NQGQCCCAGSRT+V E +YDEFVE++ ARA  R+VG+PF S  E
Sbjct: 298 ADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTE 357

Query: 378 QGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDV 426
           QGPQ+D  QF+K+L YI +G +  A L CGG    +RGYF+QPTVF DV
Sbjct: 358 QGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDV 406

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

>sp|P81178|ALDH2_MESAU Aldehyde dehydrogenase, mitochondrial OS=Mesocricetus auratus GN=ALDH2 PE=1 SV=1

 Score =  476 bits (1225), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 226/367 (61%), Positives = 274/367 (74%), Gaps = 1/367 (0%)

Query: 61  LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPY 119
            IN ++ DA S KTFP  +P T EVI  VAEG  ED+D+AV  AR AF  G PW +M   
Sbjct: 23  FINNEWHDAVSKKTFPTVNPSTGEVICQVAEGSKEDVDKAVKAARAAFQLGSPWRRMDAS 82

Query: 120 ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL 179
           +R R++ R ADLIE++   LAALET +NGKPYV S   ++ MV++ L YYAGWADK HG 
Sbjct: 83  DRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK 142

Query: 180 TVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239
           T+P DG++   T HEP+GV GQI+PWNFPLL+  WK+ PAL  GN +V+K AEQTPLTAL
Sbjct: 143 TIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTAL 202

Query: 240 YVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299
           YVA L  EAG PPGV+N+V G+GPTAGAA+ASH DVDK++FTG  + G ++Q  A  SNL
Sbjct: 203 YVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGSSNL 262

Query: 300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 359
           K VTLELGGKSP II  DAD+D AVE AHFALF+NQGQCCCAGSRT+V E VYDEFVE++
Sbjct: 263 KRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDVYDEFVERS 322

Query: 360 KARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQ 419
            ARA  R+VG+PF S  EQGPQ+D  QF+K+L YI+SG +  A L CGG    +RGYF+Q
Sbjct: 323 VARAKSRVVGNPFDSRTEQGPQVDETQFKKILGYIKSGQQEGAKLLCGGGAAADRGYFIQ 382

Query: 420 PTVFSDV 426
           PTVF DV
Sbjct: 383 PTVFGDV 389

Mesocricetus auratus (taxid: 10036)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

>sp|Q62148|AL1A2_MOUSE Retinal dehydrogenase 2 OS=Mus musculus GN=Aldh1a2 PE=1 SV=2

 Score =  474 bits (1219), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 217/378 (57%), Positives = 283/378 (74%), Gaps = 1/378 (0%)

Query: 51  PPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDE 110
           P ++I YTK  IN ++ ++ SG+ FPV +P T E +  V E D  DID+AV  AR AF  
Sbjct: 31  PNLEIKYTKIFINNEWQNSESGRVFPVCNPATGEQVCEVQEADKVDIDKAVQAARLAFSL 90

Query: 111 GP-WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYY 169
           G  W +M   ER R++ + ADL+E++   LA +E+ N GKP++Q+   ++  V++ L YY
Sbjct: 91  GSVWRRMDASERGRLLDKLADLVERDRATLATMESLNGGKPFLQAFYIDLQGVIKTLRYY 150

Query: 170 AGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLK 229
           AGWADKIHG+T+P DG+Y   T HEPIGV GQI+PWNFPLL+FTWK+APAL CGNT+V+K
Sbjct: 151 AGWADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFTWKIAPALCCGNTVVIK 210

Query: 230 SAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKI 289
            AEQTPL+ALY+  L  EAG PPGV+N++ GYGPTAGAA+ASH+ +DK++FTG  + GK+
Sbjct: 211 PAEQTPLSALYMGALIKEAGFPPGVVNILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKL 270

Query: 290 VQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHE 349
           +QE A +SNLK VTLELGGKSP IIF DAD+D AVE AH  +F+NQGQCC AGSR +V E
Sbjct: 271 IQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEE 330

Query: 350 RVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGD 409
            +Y+EFV+++  RA RRIVG PF    EQGPQID +Q+ KVL  I+SG+   A LECGG 
Sbjct: 331 SIYEEFVKRSVERAKRRIVGSPFDPTTEQGPQIDKKQYNKVLELIQSGVAEGAKLECGGK 390

Query: 410 RLGNRGYFVQPTVFSDVT 427
            LG +G+F++PTVFS+VT
Sbjct: 391 GLGRKGFFIEPTVFSNVT 408

Recognizes as substrates free retinal and cellular retinol-binding protein-bound retinal. Does metabolize octanal and decanal but does not metabolize citral, benzaldehyde, acetaldehyde and propanal efficiently.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

EC: 6

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	456
255540719	534	aldehyde dehydrogenase, putative [Ricinu	0.877	0.749	0.837	0.0
356562748	542	PREDICTED: LOW QUALITY PROTEIN: aldehyde	0.885	0.745	0.819	0.0
224133500	542	predicted protein [Populus trichocarpa]	0.905	0.761	0.794	0.0
356516690	540	PREDICTED: aldehyde dehydrogenase family	0.901	0.761	0.791	0.0
449440686	548	PREDICTED: aldehyde dehydrogenase family	0.888	0.739	0.799	0.0
225457075	538	PREDICTED: aldehyde dehydrogenase family	0.881	0.747	0.799	0.0
312283557	538	unnamed protein product [Thellungiella h	0.929	0.788	0.755	0.0
73647513	537	aldehyde dehydrogenase [Vitis pseudoreti	0.881	0.748	0.801	0.0
147772376	538	hypothetical protein VITISV_013710 [Viti	0.881	0.747	0.799	0.0
15228319	538	aldehyde dehydrogenase 2B4 [Arabidopsis	0.929	0.788	0.743	0.0

>gi|255540719|ref|XP_002511424.1| aldehyde dehydrogenase, putative [Ricinus communis] gi|223550539|gb|EEF52026.1| aldehyde dehydrogenase, putative [Ricinus communis]

 Score =  721 bits (1861), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 335/400 (83%), Positives = 367/400 (91%)

Query: 27  GRESSRARGISRFSTAAVVEEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVI 86
           G+  +R R I RFSTAAV EEPI PPVQISYT++ INGQFVDAASGKTFP YDPRT +VI
Sbjct: 23  GKNPNRGRSIYRFSTAAVAEEPITPPVQISYTQHFINGQFVDAASGKTFPAYDPRTGQVI 82

Query: 87  ANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWN 146
           A VAEGDAEDI+RAVA ARKAFDEGPWPKMT YERSRI+LR A+L+EKN +ELAALETWN
Sbjct: 83  AQVAEGDAEDINRAVAAARKAFDEGPWPKMTAYERSRIILRFAELVEKNNDELAALETWN 142

Query: 147 NGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWN 206
           NGKPY QS KSE+P++ RL HYYAGWADKIHGLTVP DGN+H+Q LHEPIGVAGQI+PWN
Sbjct: 143 NGKPYEQSAKSELPLLSRLFHYYAGWADKIHGLTVPADGNHHVQILHEPIGVAGQIIPWN 202

Query: 207 FPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAG 266
           FPL+LF WKV PAL CGNTIVLK+AEQTPLTALY AKLFHEAGLPPGVLNVVSGYGPTAG
Sbjct: 203 FPLILFAWKVGPALACGNTIVLKTAEQTPLTALYAAKLFHEAGLPPGVLNVVSGYGPTAG 262

Query: 267 AALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVEL 326
           AALASHMDVDKL+FTG  +TGKIV EL+AKSNLKPVTLELGGKSPF++ +DADVD+AVEL
Sbjct: 263 AALASHMDVDKLAFTGSTETGKIVLELSAKSNLKPVTLELGGKSPFVVCEDADVDKAVEL 322

Query: 327 AHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQ 386
           AHFALF+NQGQCCCAGSRTYVHERVYDEF+EKAKARAMRR+VGDPF+ GVEQGPQID EQ
Sbjct: 323 AHFALFFNQGQCCCAGSRTYVHERVYDEFLEKAKARAMRRVVGDPFRKGVEQGPQIDSEQ 382

Query: 387 FQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDV 426
           FQKVLRYI+SGIESNATLECGGDR G RGYF+QPTVFS+V
Sbjct: 383 FQKVLRYIKSGIESNATLECGGDRFGPRGYFIQPTVFSNV 422

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356562748|ref|XP_003549631.1| PREDICTED: LOW QUALITY PROTEIN: aldehyde dehydrogenase family 2 member B4, mitochondrial-like [Glycine max]

 Score =  709 bits (1830), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/404 (81%), Positives = 367/404 (90%)

Query: 23  LRSLGRESSRARGISRFSTAAVVEEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRT 82
           L SLGR     R I+RFSTAA VEE I P V I YT+NLINGQFVDAASGKTFP YDPR+
Sbjct: 27  LHSLGRNPGGWRNINRFSTAAAVEELITPQVSIRYTQNLINGQFVDAASGKTFPTYDPRS 86

Query: 83  AEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAAL 142
            EVIANVAEGD EDI+RAV+ ARKAFDEGPWPKMT YERSRI+LR ADL+EK+ +ELAAL
Sbjct: 87  GEVIANVAEGDVEDINRAVSAARKAFDEGPWPKMTAYERSRILLRFADLVEKHSDELAAL 146

Query: 143 ETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQI 202
           ETWNNGK Y Q+ K+E+PM VRL HYYAGWADKIHGLTVP DG+YH+QTLHEPIGVAGQI
Sbjct: 147 ETWNNGKTYEQAAKTELPMFVRLFHYYAGWADKIHGLTVPADGDYHVQTLHEPIGVAGQI 206

Query: 203 VPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYG 262
           +PWNFPL++F WKV PAL CGNTIVLK+AEQTPLTAL+VAKLFHEAGLP GVLNVVSGYG
Sbjct: 207 IPWNFPLVMFAWKVGPALACGNTIVLKTAEQTPLTALFVAKLFHEAGLPDGVLNVVSGYG 266

Query: 263 PTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQ 322
           PTAGAALASHMDVDKL+FTG  DTGK+V ELAA+SNLKPVTLELGGKSPFII +DADVD+
Sbjct: 267 PTAGAALASHMDVDKLAFTGSTDTGKVVLELAARSNLKPVTLELGGKSPFIICEDADVDK 326

Query: 323 AVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQI 382
           AVELAHFALF+NQGQCCCAGSRT+VHERVYDEF+EK+K RA+RR+VGDPFK GVEQGPQI
Sbjct: 327 AVELAHFALFFNQGQCCCAGSRTFVHERVYDEFLEKSKKRALRRVVGDPFKKGVEQGPQI 386

Query: 383 DPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDV 426
           D EQF+KVLRYIRSGIES+ATLECGGDRLG++G+FVQPTVFS+V
Sbjct: 387 DVEQFEKVLRYIRSGIESHATLECGGDRLGSKGFFVQPTVFSNV 430

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224133500|ref|XP_002321583.1| predicted protein [Populus trichocarpa] gi|222868579|gb|EEF05710.1| predicted protein [Populus trichocarpa]

 Score =  704 bits (1818), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/413 (79%), Positives = 368/413 (89%)

Query: 14  SFPSASPSLLRSLGRESSRARGISRFSTAAVVEEPIIPPVQISYTKNLINGQFVDAASGK 73
           S PSAS  LL S G+   R RG+ RFS AA +EE I PPVQISYT++LINGQFVDAASGK
Sbjct: 18  SAPSASTPLLLSRGKNPGRGRGVCRFSNAAALEETITPPVQISYTQHLINGQFVDAASGK 77

Query: 74  TFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIE 133
           TFP +DPRT EVIA+VAEGDAED++RAVA ARKAFDEGPWPKM+ YERS IMLR ADL++
Sbjct: 78  TFPTHDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEGPWPKMSAYERSLIMLRFADLVD 137

Query: 134 KNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLH 193
           K+  ELAALE+WN+GKPY QS KSE+P   RL  YYAGWADKIHGLTVP DGN+H+QTLH
Sbjct: 138 KHRGELAALESWNSGKPYEQSAKSELPSFARLFRYYAGWADKIHGLTVPADGNHHVQTLH 197

Query: 194 EPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPG 253
           EPIGVAGQI+PWNFPL++F WKV PAL CGNTIVLKSAEQTPLTALY AKLF EAGLPPG
Sbjct: 198 EPIGVAGQIIPWNFPLIMFAWKVGPALACGNTIVLKSAEQTPLTALYAAKLFQEAGLPPG 257

Query: 254 VLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFI 313
           VLNVVSGYGP+AGAALA HMDVDK++FTG  +TGKI+ ELAAKSNLK VTLELGGKSPFI
Sbjct: 258 VLNVVSGYGPSAGAALACHMDVDKIAFTGSTETGKIILELAAKSNLKAVTLELGGKSPFI 317

Query: 314 IFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFK 373
           + +DADVD+AVELAHFALF+NQGQCCCAGSRTYVHERVYDEFVEKAKARA+RR+VGDPFK
Sbjct: 318 VCEDADVDKAVELAHFALFFNQGQCCCAGSRTYVHERVYDEFVEKAKARALRRVVGDPFK 377

Query: 374 SGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDV 426
            GVEQGPQID EQF+K+LRYI+SG+ESNATLECGG R G++GYF+QPTVFS+V
Sbjct: 378 KGVEQGPQIDSEQFEKILRYIKSGVESNATLECGGQRFGSKGYFIQPTVFSNV 430

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356516690|ref|XP_003527026.1| PREDICTED: aldehyde dehydrogenase family 2 member B4, mitochondrial-like [Glycine max]

 Score =  698 bits (1801), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/413 (79%), Positives = 370/413 (89%), Gaps = 2/413 (0%)

Query: 14  SFPSASPSLLRSLGRESSRARGISRFSTAAVVEEPIIPPVQISYTKNLINGQFVDAASGK 73
           SF +AS  LL SLGR S +    +RFSTAA VE+ I P V I+YTK+LINGQFVDAASGK
Sbjct: 18  SFQAAS--LLHSLGRNSGKWGNFNRFSTAAAVEDLITPQVPITYTKHLINGQFVDAASGK 75

Query: 74  TFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIE 133
           TFP YDPRT EVIA VAEGDAEDI+RAV+ ARKAFDEGPWPK+T YER +I+LR ADL+E
Sbjct: 76  TFPTYDPRTGEVIAQVAEGDAEDINRAVSAARKAFDEGPWPKLTAYERCKIILRFADLVE 135

Query: 134 KNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLH 193
           K+ +ELAALETWNNGKPY QS  +E+P  VRL  YYAGWADKIHGLTVP DGNYH++TLH
Sbjct: 136 KHGDELAALETWNNGKPYEQSATAELPTFVRLFRYYAGWADKIHGLTVPADGNYHVETLH 195

Query: 194 EPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPG 253
           EPIGVAGQI+PWNFPLL+F WKV PAL CGNT++LK+AEQTPLTALYVAKLFHEAGLPPG
Sbjct: 196 EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTVILKTAEQTPLTALYVAKLFHEAGLPPG 255

Query: 254 VLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFI 313
           VLNVVSGYGPTAGAALASHMDVDKL+FTG  +TGK+V  LAA+SNLKPVTLELGGKSPFI
Sbjct: 256 VLNVVSGYGPTAGAALASHMDVDKLAFTGSTETGKVVLGLAAQSNLKPVTLELGGKSPFI 315

Query: 314 IFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFK 373
           + +DADVDQAVELAHFALF+NQGQCCCAGSRT+VHE +YDEF+EKAKARA++R+VGDPFK
Sbjct: 316 VCEDADVDQAVELAHFALFFNQGQCCCAGSRTFVHEHIYDEFLEKAKARALKRVVGDPFK 375

Query: 374 SGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDV 426
            GVEQGPQID EQFQKVLRYI+SGIES ATLECGGD++G++G+FVQPTVFS+V
Sbjct: 376 KGVEQGPQIDVEQFQKVLRYIKSGIESKATLECGGDQIGSKGFFVQPTVFSNV 428

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449440686|ref|XP_004138115.1| PREDICTED: aldehyde dehydrogenase family 2 member B4, mitochondrial-like [Cucumis sativus]

 Score =  696 bits (1796), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/408 (79%), Positives = 372/408 (91%), Gaps = 3/408 (0%)

Query: 21  SLLRSLGRESS-RARGISRFSTAAVVEEPII-PPVQISYTKNLINGQFVDAASGKTFPVY 78
           SLL+S GR S    RG   FST+A+ EE +I PPVQI+YT+NLINGQFVD+ASGKTFP Y
Sbjct: 30  SLLQSHGRVSRFLGRGYG-FSTSALAEEELITPPVQINYTQNLINGQFVDSASGKTFPTY 88

Query: 79  DPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEE 138
           DPRT EVIA+VAEGDAED++RAV+ ARKAFDEGPWP+M+ YERSRI+LR ADLIEK+  E
Sbjct: 89  DPRTGEVIAHVAEGDAEDVNRAVSAARKAFDEGPWPRMSAYERSRILLRFADLIEKHTPE 148

Query: 139 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGV 198
           L+ALETWNNGKPY QSLKSE+P++VRL HYYAGWADKIHGLTVP DGN+H+Q LHEPIGV
Sbjct: 149 LSALETWNNGKPYEQSLKSELPLLVRLFHYYAGWADKIHGLTVPADGNHHVQVLHEPIGV 208

Query: 199 AGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVV 258
           AGQI+PWNFPL++F WKV PAL CGNT+VLK+AEQTPLTALYVAKL HEAGLPPGVLN+V
Sbjct: 209 AGQIIPWNFPLIMFAWKVGPALACGNTVVLKTAEQTPLTALYVAKLLHEAGLPPGVLNIV 268

Query: 259 SGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDA 318
           SGYGPTAGAALASHMDVDKL+FTG   TGK+V ELAAKSNLKPVTLELGGKSPFI+ +DA
Sbjct: 269 SGYGPTAGAALASHMDVDKLAFTGSTSTGKVVLELAAKSNLKPVTLELGGKSPFIVCEDA 328

Query: 319 DVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQ 378
           DVD+AVELAHFALF+NQGQCCCAGSRT+VHERV++EFVEK+KARA RR+VGDPFK GVEQ
Sbjct: 329 DVDKAVELAHFALFFNQGQCCCAGSRTFVHERVHEEFVEKSKARAQRRVVGDPFKKGVEQ 388

Query: 379 GPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDV 426
           GPQID +QF+KVLRYI+SGIESNATLECGG RLG++GYF++PTVFS+V
Sbjct: 389 GPQIDSDQFEKVLRYIKSGIESNATLECGGGRLGSKGYFIEPTVFSNV 436

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225457075|ref|XP_002283132.1| PREDICTED: aldehyde dehydrogenase family 2 member B4, mitochondrial [Vitis vinifera] gi|297733807|emb|CBI15054.3| unnamed protein product [Vitis vinifera]

 Score =  696 bits (1796), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/404 (79%), Positives = 364/404 (90%), Gaps = 2/404 (0%)

Query: 25  SLGRESSRARGISRFSTAAV--VEEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRT 82
           SLG+  +R + I RFSTAA   VEE I P VQI+YT+ LINGQFVDAASGKTFP +DPRT
Sbjct: 23  SLGKNFNRGKSIHRFSTAAAAAVEELITPTVQINYTQLLINGQFVDAASGKTFPTFDPRT 82

Query: 83  AEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAAL 142
            EVIANVAEGDAEDI+RAV+ ARKAFDEGPWP+M+PYERSRI+LR ADL EK+ +ELAAL
Sbjct: 83  GEVIANVAEGDAEDINRAVSAARKAFDEGPWPRMSPYERSRILLRFADLAEKHNDELAAL 142

Query: 143 ETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQI 202
           ETWNNGKPY Q+ K+E+P+ VRL  YYAGWADKIHGLTV  DG +H+Q LHEPIGVAGQI
Sbjct: 143 ETWNNGKPYEQAAKAELPLFVRLFRYYAGWADKIHGLTVQADGPHHVQILHEPIGVAGQI 202

Query: 203 VPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYG 262
           +PWNFPL++F WKV PAL CGNTIVLK+AEQTPLTAL+ AKLFHEAGLPPG+LN+VSGYG
Sbjct: 203 IPWNFPLMMFAWKVGPALACGNTIVLKTAEQTPLTALFAAKLFHEAGLPPGILNIVSGYG 262

Query: 263 PTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQ 322
           PTAGAALASHMDVDK++FTG  DTGKIVQELA+KSNLKPVTLELGGKSPFI+ +DAD+DQ
Sbjct: 263 PTAGAALASHMDVDKIAFTGSTDTGKIVQELASKSNLKPVTLELGGKSPFIVCEDADIDQ 322

Query: 323 AVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQI 382
           AVELAHFALF+NQGQCCCAGSRT+VHE VYDEF+EKAKARA+ R VGDPFK G+EQGPQI
Sbjct: 323 AVELAHFALFFNQGQCCCAGSRTFVHESVYDEFIEKAKARALSRTVGDPFKKGIEQGPQI 382

Query: 383 DPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDV 426
           DPEQF KVLRYIRSGIESNATLECGG R+G++GYFVQPTVFS+V
Sbjct: 383 DPEQFAKVLRYIRSGIESNATLECGGGRIGSKGYFVQPTVFSNV 426

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|312283557|dbj|BAJ34644.1| unnamed protein product [Thellungiella halophila]

 Score =  696 bits (1795), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/425 (75%), Positives = 372/425 (87%), Gaps = 1/425 (0%)

Query: 3   AARRISTLLSRSFPSASPSLLRSLGRESSRARGISR-FSTAAVVEEPIIPPVQISYTKNL 61
           AARR+S+LL RSF ++SP L RS GR       I+R F T++  EE I P VQ+S+T+ L
Sbjct: 2   AARRVSSLLYRSFSASSPFLFRSQGRNCYNGSRIARRFGTSSAAEEIISPSVQVSHTQLL 61

Query: 62  INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYER 121
           I+G FVDAASGKTFP  DPRT EVIA+VAEGDAEDI+RAV  ARKAFDEGPWPKMT YER
Sbjct: 62  IDGNFVDAASGKTFPTLDPRTGEVIAHVAEGDAEDINRAVKAARKAFDEGPWPKMTAYER 121

Query: 122 SRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTV 181
           SRIMLR ADL+EK+ E+LA+LE+W+NGK Y Q+  SE+PM+ RL  YYAGWADKIHGLTV
Sbjct: 122 SRIMLRFADLVEKHSEQLASLESWDNGKTYEQAKTSEIPMLARLFRYYAGWADKIHGLTV 181

Query: 182 PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYV 241
           P DGNYH+QTLHEPIGVAGQI+PWNFPLL+F WKV PAL CGNTIVLK+AEQTPLTA YV
Sbjct: 182 PADGNYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLTAFYV 241

Query: 242 AKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKP 301
            KLF EAGLPPGVLN+VSG+GPTAGA+LASHMDVDKL+FTG  DTGK++  LAA SNLKP
Sbjct: 242 GKLFLEAGLPPGVLNIVSGFGPTAGASLASHMDVDKLAFTGSTDTGKVILGLAANSNLKP 301

Query: 302 VTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKA 361
           VTLELGGKSPFI+F+DAD+++AVELAHFALF+NQGQCCCAGSRTYVHE+VYDEFVEKAKA
Sbjct: 302 VTLELGGKSPFIVFEDADINKAVELAHFALFFNQGQCCCAGSRTYVHEKVYDEFVEKAKA 361

Query: 362 RAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPT 421
           RA++R+VGDPFK G EQGPQID +QF+KV++YIRSG+ESNATLECGGD+ G +GYF+QPT
Sbjct: 362 RALKRVVGDPFKKGTEQGPQIDLKQFEKVMKYIRSGVESNATLECGGDQFGKKGYFIQPT 421

Query: 422 VFSDV 426
           VFS+V
Sbjct: 422 VFSNV 426

Source: Thellungiella halophila

Species: Eutrema halophilum

Genus: Eutrema

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|73647513|gb|AAZ79355.1| aldehyde dehydrogenase [Vitis pseudoreticulata]

 Score =  696 bits (1795), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/403 (80%), Positives = 364/403 (90%), Gaps = 1/403 (0%)

Query: 25  SLGRESSRARGISRFSTAAV-VEEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTA 83
           SLG+  +R + I RFSTAA  VEE I P VQI+YT+ LINGQFVDAASGKTFP +DPRT 
Sbjct: 23  SLGKNFNRGKSIHRFSTAAAAVEELITPTVQINYTQLLINGQFVDAASGKTFPTFDPRTG 82

Query: 84  EVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALE 143
           EVIANVAEGDAEDI+RAV+ ARKAFDEGPWP+M+PYERSRI+LR ADL EK+ +ELAALE
Sbjct: 83  EVIANVAEGDAEDINRAVSAARKAFDEGPWPRMSPYERSRILLRFADLAEKHNDELAALE 142

Query: 144 TWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIV 203
           TWNNGKPY Q+ K+E+P+ VRL  YYAGWADKIHGLTV  DG +H+Q LHEPIGVAGQI+
Sbjct: 143 TWNNGKPYEQAAKAELPLFVRLFRYYAGWADKIHGLTVQADGPHHVQILHEPIGVAGQII 202

Query: 204 PWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGP 263
           PWNFPL++F WKV PAL CGNTIVLK+AEQTPLTAL+ AKLFHEAGLPPGVLN+VSGYGP
Sbjct: 203 PWNFPLMMFAWKVGPALACGNTIVLKTAEQTPLTALFAAKLFHEAGLPPGVLNIVSGYGP 262

Query: 264 TAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQA 323
           TAGAALASHMDVDK++FTG  DTGKIVQELAAKSNLKPVTLELGGKSPFI+ +DAD+DQA
Sbjct: 263 TAGAALASHMDVDKIAFTGSTDTGKIVQELAAKSNLKPVTLELGGKSPFIVCEDADIDQA 322

Query: 324 VELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQID 383
           VELAHFALF+NQGQCCCAGSRT+VHE VYDEF+EKAKARA+ R VGDPFK G+EQGPQID
Sbjct: 323 VELAHFALFFNQGQCCCAGSRTFVHESVYDEFIEKAKARALSRTVGDPFKKGIEQGPQID 382

Query: 384 PEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDV 426
           PEQF KVLRYI+SG+ESNATLECGG R+G++GYFVQPTVFS+V
Sbjct: 383 PEQFAKVLRYIKSGVESNATLECGGGRIGSKGYFVQPTVFSNV 425

Source: Vitis pseudoreticulata

Species: Vitis pseudoreticulata

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147772376|emb|CAN63005.1| hypothetical protein VITISV_013710 [Vitis vinifera]

 Score =  695 bits (1793), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/404 (79%), Positives = 363/404 (89%), Gaps = 2/404 (0%)

Query: 25  SLGRESSRARGISRFSTAAV--VEEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRT 82
           SLG+  +R + I RFSTAA   VEE I P VQI+YT+ LINGQFVDAASGKTFP +DPRT
Sbjct: 23  SLGKNFNRGKSIHRFSTAAAAAVEELITPTVQINYTQLLINGQFVDAASGKTFPTFDPRT 82

Query: 83  AEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAAL 142
            EVIANVAEGDAEDI+RAV+ ARKAFDEGPWP+M+PYERSRI+LR ADL EK+ +ELAAL
Sbjct: 83  GEVIANVAEGDAEDINRAVSAARKAFDEGPWPRMSPYERSRILLRFADLAEKHNDELAAL 142

Query: 143 ETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQI 202
           ETWNNGKPY Q+ K+E+P+ VRL  YYAGWADKIHGLTV  DG +H+Q LHEPIGVAGQI
Sbjct: 143 ETWNNGKPYEQAAKAELPLFVRLFRYYAGWADKIHGLTVQADGPHHVQILHEPIGVAGQI 202

Query: 203 VPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYG 262
           +PWNFPL++F WKV PAL CGNTIVLK+AEQTPLTAL+ AKLFHEAGLPPG LN+VSGYG
Sbjct: 203 IPWNFPLMMFAWKVGPALACGNTIVLKTAEQTPLTALFAAKLFHEAGLPPGXLNIVSGYG 262

Query: 263 PTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQ 322
           PTAGAALASHMDVDK++FTG  DTGKIVQELA+KSNLKPVTLELGGKSPFI+ +DAD+DQ
Sbjct: 263 PTAGAALASHMDVDKIAFTGSTDTGKIVQELASKSNLKPVTLELGGKSPFIVCEDADIDQ 322

Query: 323 AVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQI 382
           AVELAHFALF+NQGQCCCAGSRT+VHE VYDEF+EKAKARA+ R VGDPFK G+EQGPQI
Sbjct: 323 AVELAHFALFFNQGQCCCAGSRTFVHESVYDEFIEKAKARALSRTVGDPFKKGIEQGPQI 382

Query: 383 DPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDV 426
           DPEQF KVLRYIRSGIESNATLECGG R+G++GYFVQPTVFS+V
Sbjct: 383 DPEQFAKVLRYIRSGIESNATLECGGGRIGSKGYFVQPTVFSNV 426

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15228319|ref|NP_190383.1| aldehyde dehydrogenase 2B4 [Arabidopsis thaliana] gi|75313899|sp|Q9SU63.1|AL2B4_ARATH RecName: Full=Aldehyde dehydrogenase family 2 member B4, mitochondrial; Short=ALDH2a; Flags: Precursor gi|11935201|gb|AAG42016.1|AF327426_1 putative (NAD+) aldehyde dehydrogenase [Arabidopsis thaliana] gi|13194814|gb|AAK15569.1|AF349522_1 putative aldehyde dehydrogenase (NAD+) [Arabidopsis thaliana] gi|13926325|gb|AAK49627.1|AF372911_1 AT3g48000/T17F15_130 [Arabidopsis thaliana] gi|4678328|emb|CAB41139.1| aldehyde dehydrogenase (NAD+)-like protein [Arabidopsis thaliana] gi|8574427|dbj|BAA96792.1| aldehyde dehydrogenase [Arabidopsis thaliana] gi|19699355|gb|AAL91287.1| AT3g48000/T17F15_130 [Arabidopsis thaliana] gi|20530141|gb|AAM27003.1| aldehyde dehydrogenase ALDH2a [Arabidopsis thaliana] gi|23397220|gb|AAN31892.1| putative aldehyde dehydrogenase (NAD+) [Arabidopsis thaliana] gi|30102522|gb|AAP21179.1| At3g48000/T17F15_130 [Arabidopsis thaliana] gi|332644834|gb|AEE78355.1| aldehyde dehydrogenase 2B4 [Arabidopsis thaliana]

 Score =  691 bits (1782), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/425 (74%), Positives = 371/425 (87%), Gaps = 1/425 (0%)

Query: 3   AARRISTLLSRSFPSASPSLLRSLGRESSRARGISRFSTA-AVVEEPIIPPVQISYTKNL 61
           AARR+S+LLSRSF ++SP L RS GR       + RF T+ A  EE I P VQ+S+T+ L
Sbjct: 2   AARRVSSLLSRSFSASSPLLFRSQGRNCYNGGILRRFGTSSAAAEEIINPSVQVSHTQLL 61

Query: 62  INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYER 121
           ING FVD+ASGKTFP  DPRT EVIA+VAEGDAEDI+RAV  AR AFDEGPWPKM+ YER
Sbjct: 62  INGNFVDSASGKTFPTLDPRTGEVIAHVAEGDAEDINRAVKAARTAFDEGPWPKMSAYER 121

Query: 122 SRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTV 181
           SR++LR ADL+EK+ EELA+LETW+NGKPY QSL +E+PM  RL  YYAGWADKIHGLT+
Sbjct: 122 SRVLLRFADLVEKHSEELASLETWDNGKPYQQSLTAEIPMFARLFRYYAGWADKIHGLTI 181

Query: 182 PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYV 241
           P DGNY + TLHEPIGVAGQI+PWNFPLL+F WKV PAL CGNTIVLK+AEQTPLTA Y 
Sbjct: 182 PADGNYQVHTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLTAFYA 241

Query: 242 AKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKP 301
            KLF EAGLPPGVLN+VSG+G TAGAALASHMDVDKL+FTG  DTGK++  LAA SNLKP
Sbjct: 242 GKLFLEAGLPPGVLNIVSGFGATAGAALASHMDVDKLAFTGSTDTGKVILGLAANSNLKP 301

Query: 302 VTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKA 361
           VTLELGGKSPFI+F+DAD+D+AVELAHFALF+NQGQCCCAGSRT+VHE+VYDEFVEK+KA
Sbjct: 302 VTLELGGKSPFIVFEDADIDKAVELAHFALFFNQGQCCCAGSRTFVHEKVYDEFVEKSKA 361

Query: 362 RAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPT 421
           RA++R+VGDPF+ G+EQGPQID +QF+KV++YI+SGIESNATLECGGD++G++GYF+QPT
Sbjct: 362 RALKRVVGDPFRKGIEQGPQIDLKQFEKVMKYIKSGIESNATLECGGDQIGDKGYFIQPT 421

Query: 422 VFSDV 426
           VFS+V
Sbjct: 422 VFSNV 426

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	456
TAIR|locus:2097845	538	ALDH2B4 "AT3G48000" [Arabidops	0.929	0.788	0.724	1.1e-172
TAIR|locus:2034855	534	ALDH2B7 "AT1G23800" [Arabidops	0.921	0.786	0.708	5.2e-168
UNIPROTKB|Q2XQV4	521	ALDH2 "Aldehyde dehydrogenase,	0.857	0.750	0.601	2.1e-123
UNIPROTKB|P20000	520	ALDH2 "Aldehyde dehydrogenase,	0.850	0.746	0.599	2.7e-123
UNIPROTKB|F1PBJ8	521	ALDH2 "Uncharacterized protein	0.857	0.750	0.598	9.2e-123
RGD|69219	519	Aldh2 "aldehyde dehydrogenase	0.859	0.755	0.587	4e-122
MGI|MGI:99600	519	Aldh2 "aldehyde dehydrogenase	0.859	0.755	0.587	5.1e-122
UNIPROTKB|P05091	517	ALDH2 "Aldehyde dehydrogenase,	0.857	0.756	0.588	8.3e-122
UNIPROTKB|E1BT93	519	ALDH2 "Uncharacterized protein	0.861	0.757	0.575	2.8e-121
UNIPROTKB|F1PGT3	518	ALDH1A2 "Uncharacterized prote	0.826	0.727	0.571	4.6e-121

TAIR|locus:2097845 ALDH2B4 "AT3G48000" [Arabidopsis thaliana (taxid:3702)]

 Score = 1678 (595.7 bits), Expect = 1.1e-172, P = 1.1e-172
 Identities = 308/425 (72%), Positives = 364/425 (85%)

Query:     3 AARRISTLLSRSFPSAXXXXXXXXXXXXXXARGISRFSTAAVVEEPII-PPVQISYTKNL 61
             AARR+S+LLSRSF ++                 + RF T++   E II P VQ+S+T+ L
Sbjct:     2 AARRVSSLLSRSFSASSPLLFRSQGRNCYNGGILRRFGTSSAAAEEIINPSVQVSHTQLL 61

Query:    62 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYER 121
             ING FVD+ASGKTFP  DPRT EVIA+VAEGDAEDI+RAV  AR AFDEGPWPKM+ YER
Sbjct:    62 INGNFVDSASGKTFPTLDPRTGEVIAHVAEGDAEDINRAVKAARTAFDEGPWPKMSAYER 121

Query:   122 SRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTV 181
             SR++LR ADL+EK+ EELA+LETW+NGKPY QSL +E+PM  RL  YYAGWADKIHGLT+
Sbjct:   122 SRVLLRFADLVEKHSEELASLETWDNGKPYQQSLTAEIPMFARLFRYYAGWADKIHGLTI 181

Query:   182 PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYV 241
             P DGNY + TLHEPIGVAGQI+PWNFPLL+F WKV PAL CGNTIVLK+AEQTPLTA Y 
Sbjct:   182 PADGNYQVHTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLTAFYA 241

Query:   242 AKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKP 301
              KLF EAGLPPGVLN+VSG+G TAGAALASHMDVDKL+FTG  DTGK++  LAA SNLKP
Sbjct:   242 GKLFLEAGLPPGVLNIVSGFGATAGAALASHMDVDKLAFTGSTDTGKVILGLAANSNLKP 301

Query:   302 VTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKA 361
             VTLELGGKSPFI+F+DAD+D+AVELAHFALF+NQGQCCCAGSRT+VHE+VYDEFVEK+KA
Sbjct:   302 VTLELGGKSPFIVFEDADIDKAVELAHFALFFNQGQCCCAGSRTFVHEKVYDEFVEKSKA 361

Query:   362 RAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPT 421
             RA++R+VGDPF+ G+EQGPQID +QF+KV++YI+SGIESNATLECGGD++G++GYF+QPT
Sbjct:   362 RALKRVVGDPFRKGIEQGPQIDLKQFEKVMKYIKSGIESNATLECGGDQIGDKGYFIQPT 421

Query:   422 VFSDV 426
             VFS+V
Sbjct:   422 VFSNV 426

GO:0004028 "3-chloroallyl aldehyde dehydrogenase activity" evidence=ISS

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=ISS

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0005524 "ATP binding" evidence=IDA

TAIR|locus:2034855 ALDH2B7 "AT1G23800" [Arabidopsis thaliana (taxid:3702)]

 Score = 1634 (580.3 bits), Expect = 5.2e-168, P = 5.2e-168
 Identities = 301/425 (70%), Positives = 360/425 (84%)

Query:     3 AARRISTLLSRSFPSAXXXXXXXXXXXXXXARGISRFST-AAVVEEPIIPPVQISYTKNL 61
             A+RR+S+LLSRSF S+               RG  R+S  AA VE  I PPV++ +T+ L
Sbjct:     2 ASRRVSSLLSRSFMSSSRSIFSLRGMN----RGAQRYSNLAAAVENTITPPVKVEHTQLL 57

Query:    62 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYER 121
             I G+FVDA SGKTFP  DPR  EVIA V+EGDAED++RAVA ARKAFDEGPWPKMT YER
Sbjct:    58 IGGRFVDAVSGKTFPTLDPRNGEVIAQVSEGDAEDVNRAVAAARKAFDEGPWPKMTAYER 117

Query:   122 SRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTV 181
             S+I+ R ADLIEK+ +E+AALETW+NGKPY QS + EVPM+ R+  YYAGWADKIHG+T+
Sbjct:   118 SKILFRFADLIEKHNDEIAALETWDNGKPYEQSAQIEVPMLARVFRYYAGWADKIHGMTM 177

Query:   182 PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYV 241
             PGDG +H+QTLHEPIGVAGQI+PWNFPLL+ +WK+ PAL CGNT+VLK+AEQTPL+AL V
Sbjct:   178 PGDGPHHVQTLHEPIGVAGQIIPWNFPLLMLSWKLGPALACGNTVVLKTAEQTPLSALLV 237

Query:   242 AKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKP 301
              KL HEAGLP GV+N+VSG+G TAGAA+ASHMDVDK++FTG  D GKI+ ELA+KSNLK 
Sbjct:   238 GKLLHEAGLPDGVVNIVSGFGATAGAAIASHMDVDKVAFTGSTDVGKIILELASKSNLKA 297

Query:   302 VTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKA 361
             VTLELGGKSPFI+ +DADVDQAVELAHFALF+NQGQCCCAGSRT+VHERVYDEFVEKAKA
Sbjct:   298 VTLELGGKSPFIVCEDADVDQAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKA 357

Query:   362 RAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPT 421
             RA++R VGDPFKSG+EQGPQ+D EQF K+L+YI+ G+E+ ATL+ GGDRLG++GY++QPT
Sbjct:   358 RALKRNVGDPFKSGIEQGPQVDSEQFNKILKYIKHGVEAGATLQAGGDRLGSKGYYIQPT 417

Query:   422 VFSDV 426
             VFSDV
Sbjct:   418 VFSDV 422

GO:0004028 "3-chloroallyl aldehyde dehydrogenase activity" evidence=ISS

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=ISS

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0016926 "protein desumoylation" evidence=RCA

GO:0050665 "hydrogen peroxide biosynthetic process" evidence=RCA

UNIPROTKB|Q2XQV4 ALDH2 "Aldehyde dehydrogenase, mitochondrial" [Sus scrofa (taxid:9823)]

 Score = 1213 (432.1 bits), Expect = 2.1e-123, P = 2.1e-123
 Identities = 237/394 (60%), Positives = 288/394 (73%)

Query:    34 RGISRFSTAAVVEEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGD 93
             R +S   T AV   P   P +I Y +  IN ++ DA S KTFP  +P T +VI +VAEGD
Sbjct:    19 RLLSAAPTQAV-PAPNQQP-EIFYNQIFINNEWHDAISKKTFPTVNPSTGDVICHVAEGD 76

Query:    94 AEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYV 152
              ED+DRAV  AR AF  G PW ++   +R R++ R ADLIE++   LAALET +NGKPYV
Sbjct:    77 KEDVDRAVEAARAAFQLGSPWRRLDASDRGRLLNRLADLIERDRTYLAALETLDNGKPYV 136

Query:   153 QSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLF 212
              S   ++ MV++ L YYAGWADK HG T+P DG+Y   T HEP+GV GQI+PWNFPLL+ 
Sbjct:   137 ISYLVDLDMVLKCLRYYAGWADKYHGKTLPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQ 196

Query:   213 TWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASH 272
              WK+ PAL  GN +V+K +EQTPLTALYVA L  EAG PPGV+N+V GYGPTAGAA+ASH
Sbjct:   197 AWKLGPALATGNVVVMKVSEQTPLTALYVANLIKEAGFPPGVVNIVPGYGPTAGAAIASH 256

Query:   273 MDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALF 332
              DVDK++FTG  + G ++Q  A KSNLK VTLELGGKSP II  DAD+D AVE AHFALF
Sbjct:   257 EDVDKVAFTGSTEVGHLIQVAAGKSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF 316

Query:   333 YNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLR 392
             +NQGQCCCAGSRT+V E +Y EFVE++ ARA  R+VG+PF S  EQGPQID  QF+K+L 
Sbjct:   317 FNQGQCCCAGSRTFVQEDIYAEFVERSVARARSRVVGNPFDSRTEQGPQIDETQFKKILG 376

Query:   393 YIRSGIESNATLECGGDRLGNRGYFVQPTVFSDV 426
             YI+SG E  A L CGG    +RGYF+QPTVF DV
Sbjct:   377 YIKSGKEEGAKLLCGGGAAADRGYFIQPTVFGDV 410

GO:0006068 "ethanol catabolic process" evidence=IEA

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=IEA

UNIPROTKB|P20000 ALDH2 "Aldehyde dehydrogenase, mitochondrial" [Bos taurus (taxid:9913)]

 Score = 1212 (431.7 bits), Expect = 2.7e-123, P = 2.7e-123
 Identities = 235/392 (59%), Positives = 286/392 (72%)

Query:    38 RFSTAAV--VEEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAE 95
             R  +AA   V  P   P ++ Y +  IN ++ DA S KTFP  +P T +VI +VAEGD  
Sbjct:    19 RLLSAATQAVPTPNQQP-EVLYNQIFINNEWHDAVSKKTFPTVNPSTGDVICHVAEGDKA 77

Query:    96 DIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQS 154
             D+DRAV  AR AF  G PW +M   ER R++ R ADLIE++   LAALET +NGKPY+ S
Sbjct:    78 DVDRAVKAARAAFQLGSPWRRMDASERGRLLNRLADLIERDRTYLAALETLDNGKPYIIS 137

Query:   155 LKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTW 214
                ++ MV++ L YYAGWADK HG T+P DG+Y   T HEP+GV GQI+PWNFPLL+  W
Sbjct:   138 YLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQAW 197

Query:   215 KVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMD 274
             K+ PAL  GN +V+K AEQTPLTALYVA L  EAG PPGV+NV+ G+GPTAGAA+ASH D
Sbjct:   198 KLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNVIPGFGPTAGAAIASHED 257

Query:   275 VDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYN 334
             VDK++FTG  + G ++Q  A KSNLK VTLELGGKSP II  DAD+D AVE AHFALF+N
Sbjct:   258 VDKVAFTGSTEVGHLIQVAAGKSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFN 317

Query:   335 QGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYI 394
             QGQCCCAGSRT+V E +Y EFVE++ ARA  R+VG+PF S  EQGPQ+D  QF+KVL YI
Sbjct:   318 QGQCCCAGSRTFVQEDIYAEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKVLGYI 377

Query:   395 RSGIESNATLECGGDRLGNRGYFVQPTVFSDV 426
             +SG E  A L CGG    +RGYF+QPTVF DV
Sbjct:   378 KSGKEEGAKLLCGGGAAADRGYFIQPTVFGDV 409

GO:0006068 "ethanol catabolic process" evidence=IEA

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=IEA

UNIPROTKB|F1PBJ8 ALDH2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 1207 (429.9 bits), Expect = 9.2e-123, P = 9.2e-123
 Identities = 236/394 (59%), Positives = 287/394 (72%)

Query:    34 RGISRFSTAAVVEEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGD 93
             R +S  S+ AV   P   P ++ Y +  IN ++ DA S KTFP  +P T EVI  VAEGD
Sbjct:    19 RLLSAASSQAV-PAPNQQP-EVFYNQIFINNEWHDAVSKKTFPTINPSTGEVICQVAEGD 76

Query:    94 AEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYV 152
              ED+D+AV  AR AF  G PW +M   +R R++ R ADLIE++   LAALET +NGKPYV
Sbjct:    77 KEDVDKAVKAARAAFQLGSPWRRMDASDRGRLLNRLADLIERDRTYLAALETLDNGKPYV 136

Query:   153 QSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLF 212
              S   ++ MV+R L YYAGWADK HG T+P DG++   T HEP+GV GQI+PWNFPLL+ 
Sbjct:   137 ISYLVDLDMVLRCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQ 196

Query:   213 TWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASH 272
              WK+ PAL  GN IV+K AEQTPLTALYVA L  EAG PPGV+N++ G+GPTAGAA+ASH
Sbjct:   197 AWKLGPALATGNVIVMKVAEQTPLTALYVANLIKEAGFPPGVVNIIPGFGPTAGAAIASH 256

Query:   273 MDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALF 332
              DVDK++FTG  + G +VQ  A  SNLK VTLELGGKSP II  DAD++ AVE AHFALF
Sbjct:   257 EDVDKVAFTGSTEVGHLVQVAAGNSNLKRVTLELGGKSPNIIMSDADMNWAVEQAHFALF 316

Query:   333 YNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLR 392
             +NQGQCCCAGSRT+V E VY EFVE++ ARA  R+VG+PF S  EQGPQ+D  QF+K+L 
Sbjct:   317 FNQGQCCCAGSRTFVQEDVYAEFVERSVARAKSRVVGNPFDSQTEQGPQVDETQFKKILG 376

Query:   393 YIRSGIESNATLECGGDRLGNRGYFVQPTVFSDV 426
             YI+SG E  A L CGG    +RGYF+QPTVF DV
Sbjct:   377 YIKSGKEEGAKLLCGGGAAADRGYFIQPTVFGDV 410

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

RGD|69219 Aldh2 "aldehyde dehydrogenase 2 family (mitochondrial)" [Rattus norvegicus (taxid:10116)]

 Score = 1201 (427.8 bits), Expect = 4.0e-122, P = 4.0e-122
 Identities = 232/395 (58%), Positives = 289/395 (73%)

Query:    33 ARGISRFSTAAVVEEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEG 92
             +R +S  +T+AV   P   P ++   +  IN ++ DA S KTFP  +P T EVI  VAEG
Sbjct:    16 SRLLSAAATSAV-PAPNQQP-EVFCNQIFINNEWHDAVSKKTFPTVNPSTGEVICQVAEG 73

Query:    93 DAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPY 151
             + ED+D+AV  A+ AF  G PW +M   +R R++ R ADLIE++   LAALET +NGKPY
Sbjct:    74 NKEDVDKAVKAAQAAFQLGSPWRRMDASDRGRLLYRLADLIERDRTYLAALETLDNGKPY 133

Query:   152 VQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLL 211
             V S   ++ MV++ L YYAGWADK HG T+P DG++   T HEP+GV GQI+PWNFPLL+
Sbjct:   134 VISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLM 193

Query:   212 FTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALAS 271
               WK+ PAL  GN +V+K AEQTPLTALYVA L  EAG PPGV+N+V G+GPTAGAA+AS
Sbjct:   194 QAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIAS 253

Query:   272 HMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFAL 331
             H DVDK++FTG  + G ++Q  A  SNLK VTLELGGKSP II  DAD+D AVE AHFAL
Sbjct:   254 HEDVDKVAFTGSTEVGHLIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFAL 313

Query:   332 FYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVL 391
             F+NQGQCCCAGSRT+V E VYDEFVE++ ARA  R+VG+PF S  EQGPQ+D  QF+K+L
Sbjct:   314 FFNQGQCCCAGSRTFVQEDVYDEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKIL 373

Query:   392 RYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDV 426
              YI+SG +  A L CGG    +RGYF+QPTVF DV
Sbjct:   374 GYIKSGQQEGAKLLCGGGAAADRGYFIQPTVFGDV 408

GO:0001889 "liver development" evidence=IEP

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=ISO;IDA

GO:0005739 "mitochondrion" evidence=ISO;IDA

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0006068 "ethanol catabolic process" evidence=IEA

GO:0032355 "response to estradiol stimulus" evidence=IEP

GO:0032496 "response to lipopolysaccharide" evidence=IEP

GO:0032570 "response to progesterone stimulus" evidence=IEP

GO:0032870 "cellular response to hormone stimulus" evidence=IEP

GO:0033574 "response to testosterone stimulus" evidence=IEP

GO:0035094 "response to nicotine" evidence=IEP

GO:0042802 "identical protein binding" evidence=IDA

GO:0043066 "negative regulation of apoptotic process" evidence=IMP

GO:0055093 "response to hyperoxia" evidence=IEP

GO:0070404 "NADH binding" evidence=IDA

GO:0071398 "cellular response to fatty acid" evidence=IEP

MGI|MGI:99600 Aldh2 "aldehyde dehydrogenase 2, mitochondrial" [Mus musculus (taxid:10090)]

 Score = 1200 (427.5 bits), Expect = 5.1e-122, P = 5.1e-122
 Identities = 232/395 (58%), Positives = 288/395 (72%)

Query:    33 ARGISRFSTAAVVEEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEG 92
             +R +S  +T+AV   P   P ++   +  IN ++ DA S KTFP  +P T EVI  VAEG
Sbjct:    16 SRLLSAAATSAV-PAPNHQP-EVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEG 73

Query:    93 DAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPY 151
             + ED+D+AV  AR AF  G PW +M   +R R++ R ADLIE++   LAALET +NGKPY
Sbjct:    74 NKEDVDKAVKAARAAFQLGSPWRRMDASDRGRLLYRLADLIERDRTYLAALETLDNGKPY 133

Query:   152 VQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLL 211
             V S   ++ MV++ L YYAGWADK HG T+P DG++   T HEP+GV GQI+PWNFPLL+
Sbjct:   134 VISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLM 193

Query:   212 FTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALAS 271
               WK+ PAL  GN +V+K AEQTPLTALYVA L  EAG PPGV+N+V G+GPTAGAA+AS
Sbjct:   194 QAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIAS 253

Query:   272 HMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFAL 331
             H  VDK++FTG  + G ++Q  A  SNLK VTLELGGKSP II  DAD+D AVE AHFAL
Sbjct:   254 HEGVDKVAFTGSTEVGHLIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFAL 313

Query:   332 FYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVL 391
             F+NQGQCCCAGSRT+V E VYDEFVE++ ARA  R+VG+PF S  EQGPQ+D  QF+K+L
Sbjct:   314 FFNQGQCCCAGSRTFVQENVYDEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKIL 373

Query:   392 RYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDV 426
              YI+SG +  A L CGG    +RGYF+QPTVF DV
Sbjct:   374 GYIKSGQQEGAKLLCGGGAAADRGYFIQPTVFGDV 408

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=ISO

GO:0005739 "mitochondrion" evidence=ISO;IDA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0042802 "identical protein binding" evidence=ISO

GO:0043066 "negative regulation of apoptotic process" evidence=ISO

GO:0055114 "oxidation-reduction process" evidence=ISO

GO:0070404 "NADH binding" evidence=ISO

UNIPROTKB|P05091 ALDH2 "Aldehyde dehydrogenase, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 1198 (426.8 bits), Expect = 8.3e-122, P = 8.3e-122
 Identities = 232/394 (58%), Positives = 286/394 (72%)

Query:    34 RGISRFSTAAVVEEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGD 93
             R +S  +T AV   P   P ++   +  IN ++ DA S KTFP  +P T EVI  VAEGD
Sbjct:    15 RLLSAAATQAV-PAPNQQP-EVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGD 72

Query:    94 AEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYV 152
              ED+D+AV  AR AF  G PW +M    R R++ R ADLIE++   LAALET +NGKPYV
Sbjct:    73 KEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYV 132

Query:   153 QSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLF 212
              S   ++ MV++ L YYAGWADK HG T+P DG++   T HEP+GV GQI+PWNFPLL+ 
Sbjct:   133 ISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQ 192

Query:   213 TWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASH 272
              WK+ PAL  GN +V+K AEQTPLTALYVA L  EAG PPGV+N+V G+GPTAGAA+ASH
Sbjct:   193 AWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASH 252

Query:   273 MDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALF 332
              DVDK++FTG  + G+++Q  A  SNLK VTLELGGKSP II  DAD+D AVE AHFALF
Sbjct:   253 EDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF 312

Query:   333 YNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLR 392
             +NQGQCCCAGSRT+V E +YDEFVE++ ARA  R+VG+PF S  EQGPQ+D  QF+K+L 
Sbjct:   313 FNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILG 372

Query:   393 YIRSGIESNATLECGGDRLGNRGYFVQPTVFSDV 426
             YI +G +  A L CGG    +RGYF+QPTVF DV
Sbjct:   373 YINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDV 406

GO:0009055 "electron carrier activity" evidence=TAS

GO:0006068 "ethanol catabolic process" evidence=IEA

GO:0004030 "aldehyde dehydrogenase [NAD(P)+

GO:0005975 "carbohydrate metabolic process" evidence=TAS

GO:0006066 "alcohol metabolic process" evidence=TAS

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=EXP

GO:0005759 "mitochondrial matrix" evidence=TAS

GO:0006069 "ethanol oxidation" evidence=TAS

GO:0006805 "xenobiotic metabolic process" evidence=TAS

GO:0007268 "synaptic transmission" evidence=TAS

GO:0042136 "neurotransmitter biosynthetic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

UNIPROTKB|E1BT93 ALDH2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 1193 (425.0 bits), Expect = 2.8e-121, P = 2.8e-121
 Identities = 228/396 (57%), Positives = 288/396 (72%)

Query:    34 RGISR-FSTAAVVEEPII-PPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAE 91
             RG +R  S AA    P   P  +I+Y K  IN ++ DA S KTFP  +P T EVI  VAE
Sbjct:    13 RGQARQLSAAAASPIPAPNPSPEIAYNKIFINNEWHDAVSKKTFPTVNPATGEVICQVAE 72

Query:    92 GDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKP 150
             GD  D+D+AV  AR AF  G PW +M    R +++ R ADLIE++   LAALET +NGKP
Sbjct:    73 GDKADVDKAVKAARAAFQLGSPWRRMDASHRGKLLNRLADLIERDRAYLAALETLDNGKP 132

Query:   151 YVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLL 210
             Y  S   ++ MVV+ L Y+AGW+DK HG T+P DG++   T HEP+GV GQI+PWNFPLL
Sbjct:   133 YSISYLVDLDMVVKCLRYFAGWSDKFHGKTIPLDGDFFCYTRHEPVGVCGQIIPWNFPLL 192

Query:   211 LFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALA 270
             +  WK+ PAL  GN +V+K AEQTPL+ALYVA L  EAG PPGV+N++ GYGPTAGAA++
Sbjct:   193 MQAWKLGPALATGNVVVMKVAEQTPLSALYVANLIKEAGFPPGVVNIIPGYGPTAGAAIS 252

Query:   271 SHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFA 330
             +HMDVDK++FTG  + G ++++ AA+SNLK VTLELGGKSP II  DAD+D AV+ AHFA
Sbjct:   253 AHMDVDKVAFTGSTEVGHLIKKAAAESNLKRVTLELGGKSPNIIMSDADMDWAVDQAHFA 312

Query:   331 LFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKV 390
             LF+NQGQCCCAGSRTYV E +Y+EFVE++  +A  R+VG+PF    EQGPQ+D EQF+K+
Sbjct:   313 LFFNQGQCCCAGSRTYVQEDIYNEFVERSVEKAKSRVVGNPFDFKTEQGPQVDEEQFKKI 372

Query:   391 LRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDV 426
             L YI +G    A L CGG+   +RGYFVQPTVF DV
Sbjct:   373 LGYISTGKREGAKLLCGGNPAADRGYFVQPTVFGDV 408

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|F1PGT3 ALDH1A2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 1191 (424.3 bits), Expect = 4.6e-121, P = 4.6e-121
 Identities = 216/378 (57%), Positives = 282/378 (74%)

Query:    51 PPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDE 110
             P ++I YTK  IN ++ ++ SG+ FPVY+P T E +  V E D  DID+AV  AR AF  
Sbjct:    31 PNLEIKYTKIFINNEWQNSESGRVFPVYNPATGEQVCEVQEADKADIDKAVQAARLAFSL 90

Query:   111 GP-WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYY 169
             G  W +M   ER R++ + ADL+E++   LA +E+ N GKP++Q+   ++  V++ L YY
Sbjct:    91 GSVWRRMDASERGRLLDKLADLVERDRAVLATMESLNGGKPFLQAFYVDLQGVIKTLRYY 150

Query:   170 AGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLK 229
             AGWADKIHG+T+P DG+Y   T HEPIGV GQI+PWNFPLL+F WK+APAL CGNT+V+K
Sbjct:   151 AGWADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFAWKIAPALCCGNTVVIK 210

Query:   230 SAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKI 289
              AEQTPL+ALY+  L  EAG PPGV+N++ GYGPTAGAA+ASH+ +DK++FTG  + GK+
Sbjct:   211 PAEQTPLSALYMGALIKEAGFPPGVINILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKL 270

Query:   290 VQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHE 349
             +QE A +SNLK VTLELGGKSP IIF DAD+D AVE AH  +F+NQGQCC AGSR +V E
Sbjct:   271 IQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEE 330

Query:   350 RVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGD 409
              +Y+EFV ++  RA RRIVG PF    EQGPQID +Q+ K+L  I+SG+   A LECGG 
Sbjct:   331 SIYEEFVRRSVERAKRRIVGSPFDPTTEQGPQIDKKQYNKILELIQSGVAEGAKLECGGK 390

Query:   410 RLGNRGYFVQPTVFSDVT 427
              LG +G+F++PTVFS+VT
Sbjct:   391 GLGRKGFFIEPTVFSNVT 408

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P41751	ALDH_ASPNG	1, ., 2, ., 1, ., 3	0.5026	0.8267	0.7585	yes	no
Q9SU63	AL2B4_ARATH	1, ., 2, ., 1, ., 3	0.7435	0.9298	0.7881	yes	no
P47738	ALDH2_MOUSE	1, ., 2, ., 1, ., 3	0.5759	0.8881	0.7803	yes	no
P11884	ALDH2_RAT	1, ., 2, ., 1, ., 3	0.5759	0.8881	0.7803	yes	no
Q5RF00	ALDH2_PONAB	1, ., 2, ., 1, ., 3	0.5696	0.8815	0.7775	yes	no
P08157	ALDH_EMENI	1, ., 2, ., 1, ., 3	0.5422	0.8004	0.7344	yes	no
P20000	ALDH2_BOVIN	1, ., 2, ., 1, ., 3	0.6122	0.8179	0.7173	yes	no
P05091	ALDH2_HUMAN	1, ., 2, ., 1, ., 3	0.5696	0.8815	0.7775	yes	no
Q2XQV4	ALDH2_PIG	1, ., 2, ., 1, ., 3	0.6149	0.8179	0.7159	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.2.1	0.963

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	grail3.0005008802	aldehyde dehydrogenase (NAD+) (EC-1.2.1.3) (543 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	eugene3.00140876	acetate-CoA ligase (EC-6.2.1.1) (684 aa)						•	•		0.928
	gw1.V.4399.1	hypothetical protein (495 aa)			•			•		•	0.904
	gw1.I.2279.1	hypothetical protein (496 aa)			•			•		•	0.903
	gw1.IX.2836.1	SubName- Full=Putative uncharacterized protein; (481 aa)			•			•		•	0.903
	gw1.IX.2840.1	SubName- Full=Putative uncharacterized protein; (496 aa)			•			•		•	0.903
	estExt_fgenesh4_pg.C_LG_IV0428	pyruvate decarboxylase (EC-4.1.1.1) (582 aa)						•	•		0.902
	gw1.XI.3391.1	pyruvate decarboxylase (EC-4.1.1.1) (574 aa)						•	•		0.902
	estExt_fgenesh4_pm.C_LG_XVI0442	pyruvate decarboxylase (EC-4.1.1.1) (606 aa)						•			0.901
	eugene3.00060891	pyruvate decarboxylase (EC-4.1.1.1) (606 aa)						•			0.900
	gw1.XIV.108.1	annotation not avaliable (356 aa)						•			0.899

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	456
PLN02466	538	PLN02466, PLN02466, aldehyde dehydrogenase family	0.0
cd07142	476	cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen	0.0
cd07091	476	cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH	0.0
cd07141	481	cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin	0.0
PLN02766	501	PLN02766, PLN02766, coniferyl-aldehyde dehydrogena	0.0
pfam00171	459	pfam00171, Aldedh, Aldehyde dehydrogenase family	0.0
cd07143	481	cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al	1e-172
cd07144	484	cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi	1e-167
cd07112	462	cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+	1e-158
cd07114	457	cd07114, ALDH_DhaS, Uncharacterized Candidatus pel	1e-156
cd07078	432	cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog	1e-156
cd07119	482	cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de	1e-156
COG1012	472	COG1012, PutA, NAD-dependent aldehyde dehydrogenas	1e-155
cd07093	455	cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen	1e-150
cd07115	453	cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens	1e-147
PRK13252	488	PRK13252, PRK13252, betaine aldehyde dehydrogenase	1e-140
cd07109	454	cd07109, ALDH_AAS00426, Uncharacterized Saccharopo	1e-136
cd07103	451	cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina	1e-135
cd07140	486	cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate	1e-134
cd07559	480	cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu	1e-133
TIGR01804	467	TIGR01804, BADH, glycine betaine aldehyde dehydrog	1e-130
cd07097	473	cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+	1e-127
PRK13473	475	PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd	1e-127
cd07090	457	cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy	1e-127
cd07138	466	cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox	1e-126
cd07110	456	cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy	1e-124
cd07088	468	cd07088, ALDH_LactADH-AldA, Escherichia coli lacta	1e-124
cd07139	471	cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo	1e-123
cd07117	475	cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo	1e-123
cd07118	454	cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos	1e-122
cd07111	480	cd07111, ALDH_F16, Aldehyde dehydrogenase family 1	1e-122
cd06534	367	cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd	1e-121
cd07092	450	cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d	1e-120
TIGR02299	488	TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate	1e-119
cd07131	478	cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi	1e-117
cd07089	459	cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-	1e-117
cd07108	457	cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d	1e-116
PLN02467	503	PLN02467, PLN02467, betaine aldehyde dehydrogenase	1e-116
PRK09847	494	PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty	1e-115
cd07113	477	cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep	1e-114
cd07116	479	cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD	1e-110
cd07104	431	cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)	1e-107
cd07106	446	cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac	1e-107
PLN02278	498	PLN02278, PLN02278, succinic semialdehyde dehydrog	1e-106
cd07150	451	cd07150, ALDH_VaniDH_like, Pseudomonas putida vani	1e-106
cd07149	453	cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi	1e-105
cd07124	512	cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-	1e-103
cd07107	456	cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben	1e-102
cd07086	478	cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha	1e-102
TIGR03216	481	TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia	4e-99
TIGR01780	448	TIGR01780, SSADH, succinate-semialdehyde dehydroge	1e-97
cd07151	465	cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb	3e-94
cd07145	456	cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu	5e-92
PRK03137	514	PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy	1e-91
TIGR03374	472	TIGR03374, ABALDH, 1-pyrroline dehydrogenase	2e-89
PRK11241	482	PRK11241, gabD, succinate-semialdehyde dehydrogena	9e-89
cd07085	478	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd	2e-88
cd07120	455	cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al	4e-88
cd07094	453	cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA	2e-87
cd07099	453	cd07099, ALDH_DDALDH, Methylomonas sp	1e-86
PRK09407	524	PRK09407, gabD2, succinic semialdehyde dehydrogena	2e-86
cd07152	443	cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde	6e-86
cd07082	473	cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph	3e-84
cd07105	432	cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena	1e-83
cd07100	429	cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul	9e-83
cd07101	454	cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul	2e-80
PRK10090	409	PRK10090, PRK10090, aldehyde dehydrogenase A; Prov	3e-78
cd07146	451	cd07146, ALDH_PhpJ, Streptomyces putative phosphon	2e-76
TIGR04284	480	TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase,	1e-74
cd07102	452	cd07102, ALDH_EDX86601, Uncharacterized aldehyde d	2e-74
TIGR01237	511	TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb	2e-74
cd07147	452	cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f	4e-73
cd07130	474	cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin	2e-70
cd07083	500	cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent	8e-65
cd07125	518	cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car	2e-63
PRK09406	457	PRK09406, gabD1, succinic semialdehyde dehydrogena	6e-63
cd07098	465	cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil	8e-62
TIGR03250	472	TIGR03250, PhnAcAld_DH, putative phosphonoacetalde	3e-60
TIGR01722	477	TIGR01722, MMSDH, methylmalonic acid semialdehyde	6e-58
COG4230	769	COG4230, COG4230, Delta 1-pyrroline-5-carboxylate	8e-57
PRK11904	1038	PRK11904, PRK11904, bifunctional proline dehydroge	7e-55
TIGR01238	500	TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb	7e-54
PRK11905	1208	PRK11905, PRK11905, bifunctional proline dehydroge	2e-52
cd07095	431	cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem	2e-52
cd07148	455	cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031	1e-50
PRK09457	487	PRK09457, astD, succinylglutamic semialdehyde dehy	2e-50
TIGR03240	484	TIGR03240, arg_catab_astD, succinylglutamic semial	3e-45
cd07087	426	cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily:	9e-44
cd07135	436	cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia	1e-43
PLN02419	604	PLN02419, PLN02419, methylmalonate-semialdehyde de	2e-43
PLN02315	508	PLN02315, PLN02315, aldehyde dehydrogenase family	7e-43
PLN00412	496	PLN00412, PLN00412, NADP-dependent glyceraldehyde-	4e-42
TIGR01236	532	TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb	4e-41
cd07134	433	cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy	7e-41
PRK11809	1318	PRK11809, putA, trifunctional transcriptional regu	5e-40
cd07133	434	cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd	2e-39
cd07123	522	cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca	8e-39
cd07136	449	cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh	2e-38
PRK13968	462	PRK13968, PRK13968, putative succinate semialdehyd	7e-38
PTZ00381	493	PTZ00381, PTZ00381, aldehyde dehydrogenase family	1e-31
cd07132	443	cd07132, ALDH_F3AB, Aldehyde dehydrogenase family	6e-31
cd07137	432	cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase	5e-26
cd07084	442	cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+	1e-23
PRK11903	521	PRK11903, PRK11903, aldehyde dehydrogenase; Provis	1e-22
PLN02203	484	PLN02203, PLN02203, aldehyde dehydrogenase	8e-19
cd07128	513	cd07128, ALDH_MaoC-N, N-terminal domain of the mon	9e-19
PLN02174	484	PLN02174, PLN02174, aldehyde dehydrogenase family	3e-18
TIGR02278	663	TIGR02278, PaaN-DH, phenylacetic acid degradation	8e-14
cd07126	489	cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carb	4e-13
PRK11563	675	PRK11563, PRK11563, bifunctional aldehyde dehydrog	5e-13
cd07077	397	cd07077, ALDH-like, NAD(P)+-dependent aldehyde deh	3e-10
cd07129	454	cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdeh	2e-09
cd07081	439	cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acyla	2e-05
cd07122	436	cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldeh	0.001

>gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member

 Score =  855 bits (2211), Expect = 0.0
 Identities = 343/425 (80%), Positives = 384/425 (90%), Gaps = 1/425 (0%)

Query: 3   AARRISTLLSRSFPSASPSLLRSLGRESSRARGISRFST-AAVVEEPIIPPVQISYTKNL 61
           AARRIS+LLSRS  ++S +LLRS GR   R RGI RFST AA VEEPI PPVQ+SYT+ L
Sbjct: 2   AARRISSLLSRSLSASSSALLRSRGRNGGRGRGIRRFSTAAAAVEEPITPPVQVSYTQLL 61

Query: 62  INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYER 121
           INGQFVDAASGKTFP  DPRT EVIA+VAEGDAED++RAVA ARKAFDEGPWPKMT YER
Sbjct: 62  INGQFVDAASGKTFPTLDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEGPWPKMTAYER 121

Query: 122 SRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTV 181
           SRI+LR ADL+EK+ +ELAALETW+NGKPY QS K+E+PM  RL  YYAGWADKIHGLTV
Sbjct: 122 SRILLRFADLLEKHNDELAALETWDNGKPYEQSAKAELPMFARLFRYYAGWADKIHGLTV 181

Query: 182 PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYV 241
           P DG +H+QTLHEPIGVAGQI+PWNFPLL+F WKV PAL CGNTIVLK+AEQTPL+ALY 
Sbjct: 182 PADGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYA 241

Query: 242 AKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKP 301
           AKL HEAGLPPGVLNVVSG+GPTAGAALASHMDVDKL+FTG  DTGKIV ELAAKSNLKP
Sbjct: 242 AKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAAKSNLKP 301

Query: 302 VTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKA 361
           VTLELGGKSPFI+ +DADVD+AVELAHFALF+NQGQCCCAGSRT+VHERVYDEFVEKAKA
Sbjct: 302 VTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKA 361

Query: 362 RAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPT 421
           RA++R+VGDPFK GVEQGPQID EQF+K+LRYI+SG+ES ATLECGGDR G++GY++QPT
Sbjct: 362 RALKRVVGDPFKKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRFGSKGYYIQPT 421

Query: 422 VFSDV 426
           VFS+V
Sbjct: 422 VFSNV 426

Length = 538

>gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like

 Score =  714 bits (1844), Expect = 0.0
 Identities = 276/373 (73%), Positives = 324/373 (86%)

Query: 55  ISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWP 114
           + +TK  INGQFVDAASGKTFP  DPR  EVIA+VAEGDAED+DRAV  ARKAFDEGPWP
Sbjct: 1   VKHTKLFINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWP 60

Query: 115 KMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWAD 174
           +MT YERSRI+LR ADL+EK+ +ELAALETW+NGKPY Q+  +EVP+  RL  YYAGWAD
Sbjct: 61  RMTGYERSRILLRFADLLEKHADELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWAD 120

Query: 175 KIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQT 234
           KIHG+T+P DG +H+ TLHEPIGV GQI+PWNFPLL+F WKV PAL CGNTIVLK AEQT
Sbjct: 121 KIHGMTLPADGPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKVGPALACGNTIVLKPAEQT 180

Query: 235 PLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA 294
           PL+AL  AKL  EAGLP GVLN+V+G+GPTAGAA+ASHMDVDK++FTG  + GKI+ +LA
Sbjct: 181 PLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLA 240

Query: 295 AKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDE 354
           AKSNLKPVTLELGGKSPFI+ +DADVD+AVELAHFALF+NQGQCCCAGSRT+VHE +YDE
Sbjct: 241 AKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDE 300

Query: 355 FVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNR 414
           FVEKAKARA++R+VGDPF+ GVEQGPQ+D EQF+K+L YI  G E  ATL  GGDR+G++
Sbjct: 301 FVEKAKARALKRVVGDPFRKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSK 360

Query: 415 GYFVQPTVFSDVT 427
           GY++QPT+FSDV 
Sbjct: 361 GYYIQPTIFSDVK 373

Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476

>gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins

 Score =  645 bits (1665), Expect = 0.0
 Identities = 229/370 (61%), Positives = 282/370 (76%)

Query: 58  TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
           T   IN +FVD+ SGKTFP  +P T EVI  VAE D ED+D AV  AR AF+ G W KM 
Sbjct: 4   TGLFINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMD 63

Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
           P ER R++ + ADLIE++ +ELAALE+ +NGKP  +S K +V + ++ L YYAGWADKI 
Sbjct: 64  PRERGRLLNKLADLIERDRDELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQ 123

Query: 178 GLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLT 237
           G T+P DGN+   T  EPIGV GQI+PWNFPLL+  WK+APAL  GNT+VLK AEQTPL+
Sbjct: 124 GKTIPIDGNFLAYTRREPIGVCGQIIPWNFPLLMLAWKLAPALAAGNTVVLKPAEQTPLS 183

Query: 238 ALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKS 297
           ALY+A+L  EAG PPGV+N+V G+GPTAGAA++SHMDVDK++FTG    G+ + E AAKS
Sbjct: 184 ALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAAAKS 243

Query: 298 NLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVE 357
           NLK VTLELGGKSP I+FDDAD+D+AVE A F +F+NQGQCCCAGSR +V E +YDEFVE
Sbjct: 244 NLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVE 303

Query: 358 KAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYF 417
           K KARA +R+VGDPF     QGPQ+   QF K+L YI SG +  ATL  GG+R G++GYF
Sbjct: 304 KFKARAEKRVVGDPFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYF 363

Query: 418 VQPTVFSDVT 427
           +QPTVF+DV 
Sbjct: 364 IQPTVFTDVK 373

ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476

>gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like

 Score =  613 bits (1583), Expect = 0.0
 Identities = 229/376 (60%), Positives = 286/376 (76%), Gaps = 1/376 (0%)

Query: 53  VQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG- 111
            +I YTK  IN ++ D+ SGKTFP  +P T E I  V EGD  D+D+AV  AR AF  G 
Sbjct: 2   PEIKYTKIFINNEWHDSVSGKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKLGS 61

Query: 112 PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAG 171
           PW  M   ER R++ + ADLIE++   LA+LET +NGKP+ +S   ++P  +++L YYAG
Sbjct: 62  PWRTMDASERGRLLNKLADLIERDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAG 121

Query: 172 WADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSA 231
           WADKIHG T+P DG++   T HEP+GV GQI+PWNFPLL+  WK+APAL CGNT+VLK A
Sbjct: 122 WADKIHGKTIPMDGDFFTYTRHEPVGVCGQIIPWNFPLLMAAWKLAPALACGNTVVLKPA 181

Query: 232 EQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQ 291
           EQTPLTALY+A L  EAG PPGV+NVV GYGPTAGAA++SH D+DK++FTG  + GK++Q
Sbjct: 182 EQTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQ 241

Query: 292 ELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERV 351
           + A KSNLK VTLELGGKSP I+F DAD+D AVE AH ALF+N GQCCCAGSRT+V E +
Sbjct: 242 QAAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESI 301

Query: 352 YDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRL 411
           YDEFV+++  RA +R+VG+PF    EQGPQID EQF+K+L  I SG +  A LECGG R 
Sbjct: 302 YDEFVKRSVERAKKRVVGNPFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRH 361

Query: 412 GNRGYFVQPTVFSDVT 427
           G++GYF+QPTVFSDVT
Sbjct: 362 GDKGYFIQPTVFSDVT 377

NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481

>gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase

 Score =  522 bits (1345), Expect = 0.0
 Identities = 216/374 (57%), Positives = 273/374 (72%)

Query: 54  QISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPW 113
           +I +TK  ING+FVDAASGKTF   DPRT EVIA +AEGD ED+D AV  AR+AFD GPW
Sbjct: 17  EIKFTKLFINGEFVDAASGKTFETRDPRTGEVIARIAEGDKEDVDLAVKAAREAFDHGPW 76

Query: 114 PKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWA 173
           P+M+ +ER RIM++ ADLIE+++EELAAL+T + GK +      ++P    LL YYAG A
Sbjct: 77  PRMSGFERGRIMMKFADLIEEHIEELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAA 136

Query: 174 DKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQ 233
           DKIHG T+         TL EPIGV G I+PWNFP  +F  KVAPAL  G T+V+K AEQ
Sbjct: 137 DKIHGETLKMSRQLQGYTLKEPIGVVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQ 196

Query: 234 TPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQEL 293
           TPL+AL+ A L   AG+P GV+NVV+G+GPTAGAA+ASHMDVDK+SFTG  + G+ + + 
Sbjct: 197 TPLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQA 256

Query: 294 AAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYD 353
           AA SNLK V+LELGGKSP +IFDDADVD AV+LA   +FYN+G+ C A SR YV E +YD
Sbjct: 257 AATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYD 316

Query: 354 EFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGN 413
           EFV+K   +A   +VGDPF     QGPQ+D +QF+K+L YI  G    ATL  GG   G+
Sbjct: 317 EFVKKLVEKAKDWVVGDPFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGD 376

Query: 414 RGYFVQPTVFSDVT 427
           +GY+++PT+F+DVT
Sbjct: 377 KGYYIEPTIFTDVT 390

Length = 501

>gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family

 Score =  512 bits (1322), Expect = 0.0
 Identities = 196/362 (54%), Positives = 238/362 (65%), Gaps = 5/362 (1%)

Query: 66  FVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIM 125
           +VD+ S +T  V +P T EVIA V    AED+D AVA AR AF    W K  P ER+ I+
Sbjct: 1   WVDS-SSETIEVINPATGEVIATVPAATAEDVDAAVAAARAAFKA--WAKTPPSERAAIL 57

Query: 126 LRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDG 185
           L+AADL+E+  +ELA LET   GKP  ++ + EVP  +  L YYAG A K+ G T+P D 
Sbjct: 58  LKAADLLEERRDELAELETLETGKPLAEA-RGEVPRAIDTLRYYAGLARKLEGETLPSDP 116

Query: 186 NYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLF 245
                T  EP+GV G I PWNFPLLL  WK+APAL  GNT+VLK +E TPLTAL +A+LF
Sbjct: 117 GVLAYTRREPLGVVGAITPWNFPLLLAAWKIAPALAAGNTVVLKPSELTPLTALLLAELF 176

Query: 246 HEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLE 305
            EAGLPPGVLNVV+G G   G AL  H DVDK+SFTG  + G+ + + AAK NLK VTLE
Sbjct: 177 EEAGLPPGVLNVVTGSGSEVGDALVEHPDVDKVSFTGSTEVGRRIAKAAAK-NLKRVTLE 235

Query: 306 LGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMR 365
           LGGK+P I+FDDAD+D AVE A F  F N GQ C AGSR  VHE +YDEFVE+    A  
Sbjct: 236 LGGKNPLIVFDDADLDAAVEGAVFGAFGNAGQVCTAGSRLLVHESIYDEFVERLVEAAKS 295

Query: 366 RIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSD 425
             VGDP     + GP I  +Q ++VL YI    E  A L CGG+    +GYFV+PTV +D
Sbjct: 296 LKVGDPLDPDTDIGPLISKKQRERVLSYIEDAKEEGAKLLCGGEAGLEKGYFVEPTVLAD 355

Query: 426 VT 427
           VT
Sbjct: 356 VT 357

This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459

>gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like

 Score =  491 bits (1265), Expect = e-172
 Identities = 193/367 (52%), Positives = 253/367 (68%), Gaps = 2/367 (0%)

Query: 62  INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWP-KMTPYE 120
           ING+FVD+  G T  VY+P T ++I  +AE    D+D AV  A  AF E  W  K++  +
Sbjct: 11  INGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAF-ETDWGLKVSGSK 69

Query: 121 RSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLT 180
           R R + + ADL+E+N++ LA++E  +NGK +  + + +V        YY GWADKIHG  
Sbjct: 70  RGRCLSKLADLMERNLDYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQV 129

Query: 181 VPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALY 240
           +  D      T HEPIGV GQI+PWNFPLL+  WK+APAL  GNTIVLK +E TPL+ALY
Sbjct: 130 IETDIKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPLSALY 189

Query: 241 VAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLK 300
           + KL  EAG PPGV+NVVSGYG T G A++SHMD+DK++FTG    G+ V E AAKSNLK
Sbjct: 190 MTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAKSNLK 249

Query: 301 PVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAK 360
            VTLELGGKSP I+FDDAD++ AV    + +F+N GQ CCAGSR YV E +YD+FV++ K
Sbjct: 250 KVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFK 309

Query: 361 ARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQP 420
            +A +  VGDPF     QGPQ+   Q+++++ YI SG    AT+E GG R GN GYF++P
Sbjct: 310 EKAKKLKVGDPFAEDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGYFIEP 369

Query: 421 TVFSDVT 427
           T+F+DVT
Sbjct: 370 TIFTDVT 376

NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481

>gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like

 Score =  480 bits (1237), Expect = e-167
 Identities = 183/370 (49%), Positives = 243/370 (65%), Gaps = 6/370 (1%)

Query: 62  INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYER 121
           IN +FV ++ G+T    +P T EVIA+V     ED+D+AV  ARKAF E  W K+T  ER
Sbjct: 12  INNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAF-ESWWSKVTGEER 70

Query: 122 SRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTV 181
             ++ + ADL+EKN + LAA+E  ++GKPY  +   ++  ++ ++ YYAGWADKI G T+
Sbjct: 71  GELLDKLADLVEKNRDLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGKTI 130

Query: 182 PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYV 241
           P   N    TLHEP GV GQI+PWN+PL +  WK+APAL  GNT+V+K AE TPL+ LY 
Sbjct: 131 PTSPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLAPALAAGNTVVIKPAENTPLSLLYF 190

Query: 242 AKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKP 301
           A L  EAG PPGV+N++ GYG  AG+ALA H DVDK++FTG   TG++V + AA  NLK 
Sbjct: 191 ANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAAA-QNLKA 249

Query: 302 VTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKA 361
           VTLE GGKSP ++F+DAD+DQAV+ A   + YN GQ C A SR YV E +YD+FVEK   
Sbjct: 250 VTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVEKFVE 309

Query: 362 RAMRR-IVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGN---RGYF 417
              +   VG PF      GPQ+   Q+ +VL YI  G +  A L  GG++      +GYF
Sbjct: 310 HVKQNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYF 369

Query: 418 VQPTVFSDVT 427
           + PT+F+DV 
Sbjct: 370 IPPTIFTDVP 379

NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484

>gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like

 Score =  455 bits (1174), Expect = e-158
 Identities = 180/359 (50%), Positives = 226/359 (62%), Gaps = 3/359 (0%)

Query: 72  GKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADL 131
           G+TF   +P T  V+A VA  DA D+DRAVA AR+AF+ G W +++P ER  ++LR ADL
Sbjct: 1   GETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADL 60

Query: 132 IEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQT 191
           IE + +ELA LET + GKP   +L  +VP       +YA   DK++G   P   +     
Sbjct: 61  IEAHRDELALLETLDMGKPISDALAVDVPSAANTFRWYAEAIDKVYGEVAPTGPDALALI 120

Query: 192 LHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLP 251
             EP+GV G +VPWNFPLL+  WK+APAL  GN++VLK AEQ+PLTAL +A+L  EAGLP
Sbjct: 121 TREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLTALRLAELALEAGLP 180

Query: 252 PGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSP 311
            GVLNVV G+G TAG AL  HMDVD L+FTG  + G+   E + +SNLK V LE GGKSP
Sbjct: 181 AGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGGKSP 240

Query: 312 FIIFDDA-DVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGD 370
            I+F DA D+D A E A   +F+NQG+ C AGSR  VHE + DEF+EK  A A     GD
Sbjct: 241 NIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPGD 300

Query: 371 PFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRL--GNRGYFVQPTVFSDVT 427
           P       G  +    F KVL YI SG    A L  GG R+     G+FV+PTVF  VT
Sbjct: 301 PLDPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVT 359

NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462

>gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like

 Score =  450 bits (1159), Expect = e-156
 Identities = 178/360 (49%), Positives = 224/360 (62%), Gaps = 11/360 (3%)

Query: 77  VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136
             +P T E  A V E  A D+DRAVA AR AF+ G W K+TP ER +++ R ADLIE N 
Sbjct: 1   SINPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANA 60

Query: 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEP 195
           EELA LET +NGK   ++ +++V  +     YYAG ADKI G  +P D G+Y   T  EP
Sbjct: 61  EELAELETRDNGKLIRET-RAQVRYLAEWYRYYAGLADKIEGAVIPVDKGDYLNFTRREP 119

Query: 196 IGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVL 255
           +GV   I PWN PLLL   K+APAL  GNT+VLK +E TP + L +AKL  EAG PPGV+
Sbjct: 120 LGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPASTLELAKLAEEAGFPPGVV 179

Query: 256 NVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIF 315
           NVV+G+GP  G AL  H  V K++FTG  +TG+ +   AA+ NL PVTLELGGKSP I+F
Sbjct: 180 NVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAE-NLAPVTLELGGKSPNIVF 238

Query: 316 DDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK--AKARAMRRIVGDPFK 373
           DDAD+D AV      +F   GQ C AGSR  V   +YDEFVE+  A+ARA+R  VGDP  
Sbjct: 239 DDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIR--VGDPLD 296

Query: 374 SGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG----NRGYFVQPTVFSDVTVS 429
              + GP     Q +KV RY+    E  A +  GG+R        GYF +PT+ +DVT  
Sbjct: 297 PETQMGPLATERQLEKVERYVARAREEGARVLTGGERPSGADLGAGYFFEPTILADVTND 356

Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457

>gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family

 Score =  448 bits (1154), Expect = e-156
 Identities = 176/332 (53%), Positives = 207/332 (62%), Gaps = 6/332 (1%)

Query: 98  DRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKS 157
           D AVA AR AF    W  + P ER+ I+ + ADL+E+  EELAALET   GKP  ++L  
Sbjct: 1   DAAVAAARAAFKA--WAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEALG- 57

Query: 158 EVPMVVRLLHYYAGWADKIHGLTVP-GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKV 216
           EV        YYAG A ++HG  +P  D         EP+GV G I PWNFPLLL  WK+
Sbjct: 58  EVARAADTFRYYAGLARRLHGEVIPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKL 117

Query: 217 APALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVD 276
           APAL  GNT+VLK +E TPLTAL +A+L  EAGLPPGVLNVV+G G   GAALASH  VD
Sbjct: 118 APALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLNVVTGDGDEVGAALASHPRVD 177

Query: 277 KLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQG 336
           K+SFTG    GK +   AA+ NLK VTLELGGKSP I+FDDAD+D AV+ A F  F N G
Sbjct: 178 KISFTGSTAVGKAIMRAAAE-NLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAG 236

Query: 337 QCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRS 396
           Q C A SR  VHE +YDEFVE+   R     VG+P     + GP I   Q  +VL YI  
Sbjct: 237 QVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIED 296

Query: 397 GIESNATLECGGDRLGN-RGYFVQPTVFSDVT 427
                A L CGG RL   +GYFV PTV +DV 
Sbjct: 297 AKAEGAKLLCGGKRLEGGKGYFVPPTVLTDVD 328

The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432

>gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like

 Score =  449 bits (1158), Expect = e-156
 Identities = 174/370 (47%), Positives = 230/370 (62%), Gaps = 6/370 (1%)

Query: 62  INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYER 121
           I+G++V+AASGKT  + +P   EVIA V EG AED  RA+A AR+AFD G WP +   ER
Sbjct: 2   IDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQER 61

Query: 122 SRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTV 181
           + ++ R AD I ++ EELA LET N GK   +S + ++  V     YYAG A K  G   
Sbjct: 62  AALLFRIADKIREDAEELARLETLNTGKTLRES-EIDIDDVANCFRYYAGLATKETGEVY 120

Query: 182 PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYV 241
               +   +T+ EP+GV G I PWN+PLL   WK+APAL  GNT+V+K +E TPLT + +
Sbjct: 121 DVPPHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLTTIAL 180

Query: 242 AKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKP 301
            +L  EAGLP GV+N+V+G G T GA LA   DVD +SFTG   TG+ +   AA  N+K 
Sbjct: 181 FELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAG-NVKK 239

Query: 302 VTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKA 361
           V LELGGK+P I+F DAD + AV+ A   +F+N GQ C AGSR  V E ++D+FV     
Sbjct: 240 VALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAE 299

Query: 362 RAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGN----RGYF 417
           RA +  +G+   +  E GP +  E  +KVL YI+ G E  A L CGG R       +GYF
Sbjct: 300 RAKKIKLGNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYF 359

Query: 418 VQPTVFSDVT 427
           V+PT+F DV 
Sbjct: 360 VEPTIFDDVD 369

Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482

>gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion]

 Score =  448 bits (1155), Expect = e-155
 Identities = 187/370 (50%), Positives = 230/370 (62%), Gaps = 8/370 (2%)

Query: 58  TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
            K LI+G++VD AS  T  V +P T EVIA V    AED+D AVA AR AF+   W +++
Sbjct: 1   YKLLIDGEWVDGAS--TIEVINPATGEVIATVPAATAEDVDAAVAAARAAFE--AWSRLS 56

Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
             ER+ I+ R ADL+E   EELAAL T   GKP  ++ + E+      + YYA  A ++ 
Sbjct: 57  AEERAAILRRIADLLEARAEELAALITLETGKPISEA-RGEIARAADFIRYYAEEARRLE 115

Query: 178 GLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLT 237
           G T+P D         EP+GV G I PWNFPL L  WK+APAL  GNT+VLK +EQTPL+
Sbjct: 116 GETIPTDKGSKALVRREPLGVVGAITPWNFPLALAAWKLAPALAAGNTVVLKPSEQTPLS 175

Query: 238 ALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKS 297
           AL +A+L  EAGLP GVLNVV+G G   G AL +H DVD +SFTG    G+ +   AA  
Sbjct: 176 ALALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAA- 234

Query: 298 NLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVE 357
           NLKPVTLELGGKSP I+ +DAD+D AV+ A F  F+N GQ C A SR  VHE VYDEFVE
Sbjct: 235 NLKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVE 294

Query: 358 KAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYF 417
           +  ARA    VGDP     + GP I  EQ  +V  YI   +   A L  GG R G  GYF
Sbjct: 295 RLVARAASLKVGDPLDPSTDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKRPG--GYF 352

Query: 418 VQPTVFSDVT 427
           V+PT+   VT
Sbjct: 353 VEPTILEGVT 362

Length = 472

>gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like

 Score =  436 bits (1123), Expect = e-150
 Identities = 169/355 (47%), Positives = 225/355 (63%), Gaps = 7/355 (1%)

Query: 77  VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136
            ++P T EV+A V EG A ++D AVA A++AF    W +M+P ER+RI+ + ADLIE   
Sbjct: 1   NFNPATGEVLAKVPEGGAAEVDAAVAAAKEAFPG--WSRMSPAERARILHKVADLIEARA 58

Query: 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPI 196
           +ELA LE+ + GKP   +   ++P       ++A +  ++ G + P DG      L +P+
Sbjct: 59  DELALLESLDTGKPITLARTRDIPRAAANFRFFADYILQLDGESYPQDGGALNYVLRQPV 118

Query: 197 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLN 256
           GVAG I PWN PL+L TWK+APAL  GNT+VLK +E TPLTA  +A+L +EAGLPPGV+N
Sbjct: 119 GVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLTAWLLAELANEAGLPPGVVN 178

Query: 257 VVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFD 316
           VV G+GP AGAAL +H DVD +SFTG   TG+ +   AA  NLKPV+LELGGK+P I+F 
Sbjct: 179 VVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAP-NLKPVSLELGGKNPNIVFA 237

Query: 317 DADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGV 376
           DAD+D+AV+ A  + F N G+ C AGSR  V   +YDEF+E+   RA    VGDP     
Sbjct: 238 DADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDT 297

Query: 377 EQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG----NRGYFVQPTVFSDVT 427
           E GP I  E  +KVL Y+       AT+  GG R        GYFV+PTV + + 
Sbjct: 298 EVGPLISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLD 352

In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455

>gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like

 Score =  426 bits (1097), Expect = e-147
 Identities = 184/349 (52%), Positives = 227/349 (65%), Gaps = 5/349 (1%)

Query: 79  DPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEE 138
           +P T E+IA VA+  AED+D AVA AR AF+   W  M P ER RI+ R A+LI  N +E
Sbjct: 3   NPATGELIARVAQASAEDVDAAVAAARAAFE--AWSAMDPAERGRILWRLAELILANADE 60

Query: 139 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGV 198
           LA LE+ + GKP   + + +VP       YYAGWADKI G  +P  G +   T+ EP+GV
Sbjct: 61  LARLESLDTGKPIRAARRLDVPRAADTFRYYAGWADKIEGEVIPVRGPFLNYTVREPVGV 120

Query: 199 AGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVV 258
            G IVPWNFPL+   WKVAPAL  GNT+VLK AE TPL+AL +A+L  EAG P GVLNVV
Sbjct: 121 VGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSALRIAELMAEAGFPAGVLNVV 180

Query: 259 SGYGPTAGAALASHMDVDKLSFTGHCDTG-KIVQELAAKSNLKPVTLELGGKSPFIIFDD 317
           +G+G  AGAAL  H DVDK++FTG    G KI+Q   A  NLK V+LELGGKS  I+F D
Sbjct: 181 TGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQ--GAAGNLKRVSLELGGKSANIVFAD 238

Query: 318 ADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVE 377
           AD+D AV  A   +FYNQGQ C AGSR  VHE +YDEF+E+  + A     GDP     +
Sbjct: 239 ADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKTQ 298

Query: 378 QGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDV 426
            GP +   QF +VL Y+  G E  A L  GG R G RG+FV+PT+F+ V
Sbjct: 299 MGPLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGARGFFVEPTIFAAV 347

4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453

>gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional

 Score =  410 bits (1055), Expect = e-140
 Identities = 164/373 (43%), Positives = 218/373 (58%), Gaps = 8/373 (2%)

Query: 59  KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
              I+G +V+A SG+TF V +P T EV+A V      D++ AVA+A++      W  MT 
Sbjct: 8   SLYIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQKI--WAAMTA 65

Query: 119 YERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG 178
            ERSRI+ RA D++ +  +ELAALET + GKP  ++   ++     +L YYAG A  + G
Sbjct: 66  MERSRILRRAVDILRERNDELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEG 125

Query: 179 LTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 238
             +P  G   + T  EP+GV   I  WN+P+ +  WK APAL  GN ++ K +E TPLTA
Sbjct: 126 EQIPLRGGSFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLTA 185

Query: 239 LYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN 298
           L +A+++ EAGLP GV NVV G G   GA L  H D+ K+SFTG   TGK V   AA S 
Sbjct: 186 LKLAEIYTEAGLPDGVFNVVQGDGRV-GAWLTEHPDIAKVSFTGGVPTGKKVMAAAAAS- 243

Query: 299 LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 358
           LK VT+ELGGKSP I+FDDAD+D+A ++A  A FY+ GQ C  G+R +V + +   F  +
Sbjct: 244 LKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEAR 303

Query: 359 AKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGN----R 414
              R  R  +GDP       GP +      KVL YI  G    A L CGG+RL       
Sbjct: 304 LLERVERIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFAN 363

Query: 415 GYFVQPTVFSDVT 427
           G FV PTVF+D T
Sbjct: 364 GAFVAPTVFTDCT 376

Length = 488

>gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like

 Score =  400 bits (1029), Expect = e-136
 Identities = 164/353 (46%), Positives = 215/353 (60%), Gaps = 7/353 (1%)

Query: 77  VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136
           V+DP T EV A +A G A D+DRAV  AR+AF E  W +++P ER R++LR A LI ++ 
Sbjct: 1   VFDPSTGEVFARIARGGAADVDRAVQAARRAF-ESGWLRLSPAERGRLLLRIARLIREHA 59

Query: 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPI 196
           +ELA LE+ + GKP  Q+ +++V    R   YY G ADK+HG T+P    Y + T+ EP 
Sbjct: 60  DELARLESLDTGKPLTQA-RADVEAAARYFEYYGGAADKLHGETIPLGPGYFVYTVREPH 118

Query: 197 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLN 256
           GV G I+PWN+PL +    VAPAL  GN +V+K AE  PLTAL +A+L  EAGLP G LN
Sbjct: 119 GVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTALRLAELAEEAGLPAGALN 178

Query: 257 VVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFD 316
           VV+G G  AGAAL +H  VD +SFTG  +TG  V   AA+ N+ PVTLELGGKSP I+F 
Sbjct: 179 VVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAE-NVVPVTLELGGKSPQIVFA 237

Query: 317 DADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGV 376
           DAD++ A+ +   A+  N GQ C AGSR  VH  +YDE +E+   R     VG P     
Sbjct: 238 DADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVG-PGLEDP 296

Query: 377 EQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNR---GYFVQPTVFSDV 426
           + GP I  +Q  +V  ++       A +  GG         GYFV PT+  DV
Sbjct: 297 DLGPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGYFVAPTLLDDV 349

Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454

>gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like

 Score =  396 bits (1021), Expect = e-135
 Identities = 156/354 (44%), Positives = 209/354 (59%), Gaps = 9/354 (2%)

Query: 77  VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136
           V +P T EVI  V +  A D D A+  A  AF    W K T  ER+ I+ R ADLI +  
Sbjct: 1   VINPATGEVIGEVPDAGAADADAAIDAAAAAFKT--WRKTTARERAAILRRWADLIRERA 58

Query: 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEP 195
           E+LA L T   GKP  ++ + EV      L ++A  A +I+G T+P       I  + +P
Sbjct: 59  EDLARLLTLEQGKPLAEA-RGEVDYAASFLEWFAEEARRIYGRTIPSPAPGKRILVIKQP 117

Query: 196 IGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVL 255
           +GV   I PWNFP  + T K+APAL  G T+VLK AE+TPL+AL +A+L  EAGLP GVL
Sbjct: 118 VGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSALALAELAEEAGLPAGVL 177

Query: 256 NVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIF 315
           NVV+G     G AL +   V K+SFTG    GK++   AA   +K V+LELGG +PFI+F
Sbjct: 178 NVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAA-DTVKRVSLELGGNAPFIVF 236

Query: 316 DDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK--AKARAMRRIVGDPFK 373
           DDAD+D+AV+ A  + F N GQ C   +R YVHE +YDEFVEK   + + ++  VG+   
Sbjct: 237 DDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLK--VGNGLD 294

Query: 374 SGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVT 427
            G + GP I+    +KV   +   +   A +  GG RLG  GYF +PTV +DVT
Sbjct: 295 EGTDMGPLINERAVEKVEALVEDAVAKGAKVLTGGKRLGLGGYFYEPTVLTDVT 348

Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451

>gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L

 Score =  395 bits (1016), Expect = e-134
 Identities = 165/370 (44%), Positives = 231/370 (62%), Gaps = 4/370 (1%)

Query: 62  INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYER 121
           ING+FVDA  GKT+   +P    VI  V+    ED+DRAVA A++AF+ G W KM   +R
Sbjct: 10  INGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMNARDR 69

Query: 122 SRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTV 181
            R+M R ADL+E++ EELA +E+ ++G  Y  +LK+ V M ++   Y+AGW DKI G T+
Sbjct: 70  GRLMYRLADLMEEHQEELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGKTI 129

Query: 182 P---GDGNYHIQ-TLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLT 237
           P      N ++  T  EPIGV G ++PWN+PL++  WK+A  L  GNT+VLK A+ TPLT
Sbjct: 130 PINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVLKPAQVTPLT 189

Query: 238 ALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKS 297
           AL  A+L  +AG P GV+N++ G G   G  L+ H DV KL FTG    GK + +  A S
Sbjct: 190 ALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMKSCAVS 249

Query: 298 NLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVE 357
           NLK V+LELGGKSP IIF D D+D+AV +   ++F+N+G+ C A  R +V E ++DEFV 
Sbjct: 250 NLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHDEFVR 309

Query: 358 KAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYF 417
           +      +  +GDP     + GPQ       K++ Y   G++  ATL  GG ++   G+F
Sbjct: 310 RVVEEVKKMKIGDPLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDRPGFF 369

Query: 418 VQPTVFSDVT 427
            +PTVF+DV 
Sbjct: 370 FEPTVFTDVE 379

10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486

>gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like

 Score =  392 bits (1010), Expect = e-133
 Identities = 159/378 (42%), Positives = 221/378 (58%), Gaps = 13/378 (3%)

Query: 59  KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
            N ING++V  + G+ F  Y+P   +V+  +    AED+D AV  A +AF    W K + 
Sbjct: 2   DNFINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFKT--WGKTSV 59

Query: 119 YERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG 178
            ER+ I+ + AD IE+N+E LA  ET +NGKP  ++L +++P+ +    Y+AG      G
Sbjct: 60  AERANILNKIADRIEENLELLAVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEG 119

Query: 179 LTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 238
                D +      HEP+GV GQI+PWNFPLL+  WK+APAL  GNT+VLK A QTPL+ 
Sbjct: 120 SLSEIDEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPALAAGNTVVLKPASQTPLSI 179

Query: 239 LYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN 298
           L + +L  +  LP GV+NVV+G+G  AG  LASH  + KL+FTG    G+++ + AA+ N
Sbjct: 180 LVLMELIGDL-LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAAE-N 237

Query: 299 LKPVTLELGGKSPFIIFDDA-----DVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYD 353
           L PVTLELGGKSP I FDDA     D D   E       +NQG+ C   SR  V E +YD
Sbjct: 238 LIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYD 297

Query: 354 EFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRL-- 411
           EF+E+A  R     VG+P       G Q+  +Q +K+L Y+  G E  A +  GG+RL  
Sbjct: 298 EFIERAVERFEAIKVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTL 357

Query: 412 --GNRGYFVQPTVFSDVT 427
              ++GYF +PT+     
Sbjct: 358 GGLDKGYFYEPTLIKGGN 375

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480

>gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase

 Score =  385 bits (991), Expect = e-130
 Identities = 165/370 (44%), Positives = 226/370 (61%), Gaps = 7/370 (1%)

Query: 62  INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYER 121
           I+G++V+ ++G T  + +P   EVIA V     ED++RA+A AR+A  E  W  M+P ER
Sbjct: 2   IDGEYVEDSAGTTREIINPANGEVIATVHAATPEDVERAIAAARRAQGE--WAAMSPMER 59

Query: 122 SRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTV 181
            RI+ RAADLI +  EELA LET + GK   +++ +++     +  ++AG A  ++G  +
Sbjct: 60  GRILRRAADLIRERNEELAKLETLDTGKTLQETIVADMDSGADVFEFFAGLAPALNGEII 119

Query: 182 PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYV 241
           P  G     T+ EP+GV   I  WN+PL + +WK+APAL  GN +V K +E TPLTAL V
Sbjct: 120 PLGGPSFAYTIREPLGVCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPSENTPLTALKV 179

Query: 242 AKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKP 301
           A++  EAGLP GV NVV G G   G  L +H DV K+SFTG   TGK +   AA  +LK 
Sbjct: 180 AEIMEEAGLPKGVFNVVQGDGAEVGPLLVNHPDVAKVSFTGGVPTGKKIMA-AAAGHLKH 238

Query: 302 VTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKA 361
           VT+ELGGKSP I+FDDAD++ AV+ A    F++ GQ C  G+R +VH+++ + F+ +   
Sbjct: 239 VTMELGGKSPLIVFDDADLESAVDGAMLGNFFSAGQVCSNGTRVFVHKKIKERFLARLVE 298

Query: 362 RAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGN----RGYF 417
           R  R  +GDPF    E GP I      KVL YI  G    ATL  GG R  N     G+F
Sbjct: 299 RTERIKLGDPFDEATEMGPLISAAHRDKVLSYIEKGKAEGATLATGGGRPENVGLQNGFF 358

Query: 418 VQPTVFSDVT 427
           V+PTVF+D T
Sbjct: 359 VEPTVFADCT 368

Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467

>gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like

 Score =  377 bits (971), Expect = e-127
 Identities = 151/373 (40%), Positives = 209/373 (56%), Gaps = 10/373 (2%)

Query: 59  KNLINGQFVDAASGKTFPVYDP-RTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
           +N I+G++V    G+     +P  T++V+   A   AED D A+A A  AF    W + +
Sbjct: 2   RNYIDGEWVAGGDGE--ENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFPA--WRRTS 57

Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
           P  R+ I+ +A D +E   EELA L T   GK   ++ + EV    ++  YYAG A ++ 
Sbjct: 58  PEARADILDKAGDELEARKEELARLLTREEGKTLPEA-RGEVTRAGQIFRYYAGEALRLS 116

Query: 178 GLTVP-GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
           G T+P       ++T  EP+GV G I PWNFP+ +  WK+APAL  GNT+V K AE TP 
Sbjct: 117 GETLPSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAPALAYGNTVVFKPAELTPA 176

Query: 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
           +A  + ++  EAGLP GV N+V G G   G AL  H DVD +SFTG    G+ +   AA 
Sbjct: 177 SAWALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAA- 235

Query: 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 356
           +    V LE+GGK+P ++ DDAD+D AVE A    F++ GQ C A SR  V E ++D FV
Sbjct: 236 ARGARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFV 295

Query: 357 EKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRL--GNR 414
           E    R     VGD    GV+ GP +   Q +K LRYI       A L  GG+RL   + 
Sbjct: 296 EALVERTKALKVGDALDEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDE 355

Query: 415 GYFVQPTVFSDVT 427
           GY++ P +F+ VT
Sbjct: 356 GYYLAPALFAGVT 368

Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473

>gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional

 Score =  376 bits (969), Expect = e-127
 Identities = 162/376 (43%), Positives = 217/376 (57%), Gaps = 15/376 (3%)

Query: 58  TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
           TK LING+ V A  G+  PVY+P T EV+A +AE  A  +D AVA A  AF E  W + T
Sbjct: 3   TKLLINGELV-AGEGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFPE--WSQTT 59

Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
           P ER+  +L+ AD IE+N +E A LE+ N GKP   +L  E+P +V +  ++AG A  + 
Sbjct: 60  PKERAEALLKLADAIEENADEFARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLE 119

Query: 178 GLTVPGDGNY---HIQTLH-EPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQ 233
           G      G Y   H   +  +P+GV   I PWN+PL++  WK+APAL  GNT+VLK +E 
Sbjct: 120 GKAA---GEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAPALAAGNTVVLKPSEI 176

Query: 234 TPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQEL 293
           TPLTAL +A+L  +  LPPGVLNVV+G G T G AL  H  V  +S TG   TGK V   
Sbjct: 177 TPLTALKLAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSA 235

Query: 294 AAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYD 353
           AA S +K   LELGGK+P I+FDDAD+D  VE      +YN GQ C A  R Y    +YD
Sbjct: 236 AADS-VKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYD 294

Query: 354 EFVEKAKARAMRRI-VGDPFKSGVEQGPQIDPEQFQKVLRYI-RSGIESNATLECGGDRL 411
           + V K  A A+  + VGDP     E GP I      +V  ++ R+    +  +  GG+  
Sbjct: 295 DLVAKL-AAAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAP 353

Query: 412 GNRGYFVQPTVFSDVT 427
             +GY+ +PT+ +   
Sbjct: 354 DGKGYYYEPTLLAGAR 369

Length = 475

>gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1

 Score =  376 bits (967), Expect = e-127
 Identities = 159/356 (44%), Positives = 207/356 (58%), Gaps = 10/356 (2%)

Query: 77  VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136
           V +P T EV+A V    AED+D AV +A+ A  E  W   +  ER RI+ +AADL+ +  
Sbjct: 1   VIEPATGEVLATVHCAGAEDVDLAVKSAKAAQKE--WSATSGMERGRILRKAADLLRERN 58

Query: 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPI 196
           +E+A LET +NGKP  +  + ++      L YYAG A  + G  VP  G     T  EP+
Sbjct: 59  DEIARLETIDNGKPI-EEARVDIDSSADCLEYYAGLAPTLSGEHVPLPGGSFAYTRREPL 117

Query: 197 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLN 256
           GV   I  WN+P+ + +WK APAL CGN +V K +  TPLTAL +A++  EAGLP GV N
Sbjct: 118 GVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTALLLAEILTEAGLPDGVFN 177

Query: 257 VVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFD 316
           VV G G T G  L  H DV K+SFTG   TGK V   AAK  +K VTLELGGKSP IIFD
Sbjct: 178 VVQGGGET-GQLLCEHPDVAKVSFTGSVPTGKKVMSAAAK-GIKHVTLELGGKSPLIIFD 235

Query: 317 DADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGV 376
           DAD++ AV  A  A F +QGQ C  G+R +V   + DEF E+   R  +  +GDP     
Sbjct: 236 DADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDT 295

Query: 377 EQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG-----NRGYFVQPTVFSDVT 427
           + G  I  E  +KVL YI S  +  A + CGG+R+        G++V P V +D T
Sbjct: 296 QMGALISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCT 351

NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457

>gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like

 Score =  375 bits (965), Expect = e-126
 Identities = 161/370 (43%), Positives = 205/370 (55%), Gaps = 12/370 (3%)

Query: 62  INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYER 121
           I+G +V  A  +T  V +P T EVI  V  G A D+DRAVA AR+AF    W   +  ER
Sbjct: 3   IDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFP--AWSATSVEER 60

Query: 122 SRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTV 181
           + ++ R A+  E   +ELA   T   G P   +  ++V + +  L   A           
Sbjct: 61  AALLERIAEAYEARADELAQAITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFEER 120

Query: 182 PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYV 241
            G  N  +  + EPIGV G I PWN+PL     KVAPAL  G T+VLK +E  PL+A+ +
Sbjct: 121 RG--NSLV--VREPIGVCGLITPWNWPLNQIVLKVAPALAAGCTVVLKPSEVAPLSAIIL 176

Query: 242 AKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKP 301
           A++  EAGLP GV N+V+G GP  G AL++H DVD +SFTG    GK V E AA + +K 
Sbjct: 177 AEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAADT-VKR 235

Query: 302 VTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKA 361
           V LELGGKS  II DDAD+++AV     A F N GQ C A +R  V    Y E  E A A
Sbjct: 236 VALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIAAA 295

Query: 362 RAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGG----DRLGNRGYF 417
            A   +VGDP       GP     QF +V  YI+ GIE  A L  GG    + L  RGYF
Sbjct: 296 AAEAYVVGDPRDPATTLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGL-ERGYF 354

Query: 418 VQPTVFSDVT 427
           V+PTVF+DVT
Sbjct: 355 VKPTVFADVT 364

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466

>gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like

 Score =  368 bits (948), Expect = e-124
 Identities = 167/359 (46%), Positives = 219/359 (61%), Gaps = 10/359 (2%)

Query: 77  VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136
           V +P T   I  +    AED+D AV  AR+AF    W K T  ER++ +   A+ + +  
Sbjct: 1   VINPATEATIGEIPAATAEDVDAAVRAARRAFPR--WKKTTGAERAKYLRAIAEGVRERR 58

Query: 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH---GLTVP-GDGNYHIQTL 192
           EELA LE  +NGKP  ++   +V  V     YYA  A+++       VP    ++  +  
Sbjct: 59  EELAELEARDNGKPLDEAA-WDVDDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVR 117

Query: 193 HEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPP 252
            EP+GV G I PWNFPLL+  WKVAPAL  G T+VLK +E T LT L +A++  EAGLPP
Sbjct: 118 REPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTSLTELELAEIAAEAGLPP 177

Query: 253 GVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPF 312
           GVLNVV+G G  AGA LA+H  +DK+SFTG   TG  V + AA+ ++KPV+LELGGKSP 
Sbjct: 178 GVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQ-DIKPVSLELGGKSPI 236

Query: 313 IIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPF 372
           I+FDDAD+++AVE A F  F+N GQ C A SR  VHE + D F+E+    A    VGDP 
Sbjct: 237 IVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPL 296

Query: 373 KSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDR--LGNRGYFVQPTVFSDVTVS 429
           + GV  GP +   Q++KVL +I  G E  A L CGG R     +GYF+ PTVF+DV   
Sbjct: 297 EEGVRLGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTD 355

Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456

>gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like

 Score =  368 bits (946), Expect = e-124
 Identities = 159/368 (43%), Positives = 213/368 (57%), Gaps = 6/368 (1%)

Query: 62  INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYER 121
           ING+FV ++SG+T  V +P T EV+A V    AED DRAV  A  A     W ++   ER
Sbjct: 2   INGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQKA--WERLPAIER 59

Query: 122 SRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTV 181
           +  + + ADLI +N +ELA L     GK  +   + EV      + Y A WA +I G  +
Sbjct: 60  AAYLRKLADLIRENADELAKLIVEEQGKT-LSLARVEVEFTADYIDYMAEWARRIEGEII 118

Query: 182 PGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALY 240
           P D  N +I     PIGV   I+PWNFP  L   K+APAL  GNTIV+K +E+TPL AL 
Sbjct: 119 PSDRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPALVTGNTIVIKPSEETPLNALE 178

Query: 241 VAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLK 300
            A+L  EAGLP GVLN+V+G G   G AL +H  V  +S TG  + G+ + E AA+ N+ 
Sbjct: 179 FAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAE-NIT 237

Query: 301 PVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAK 360
            V+LELGGK+P I+  DAD+D AV+    +   N GQ C    R YVHE +YDEF+EK  
Sbjct: 238 KVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLV 297

Query: 361 ARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRL-GNRGYFVQ 419
            +     VGDPF +  + GP ++     KV   +   +E+ ATL  GG R  G +GYF +
Sbjct: 298 EKMKAVKVGDPFDAATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYE 357

Query: 420 PTVFSDVT 427
           PTV ++V 
Sbjct: 358 PTVLTNVR 365

Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468

>gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like

 Score =  367 bits (945), Expect = e-123
 Identities = 158/370 (42%), Positives = 200/370 (54%), Gaps = 7/370 (1%)

Query: 62  INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYER 121
           I G++V  +  +T  V  P T EV+  V E    D+D AVA AR+AFD GPWP+++P ER
Sbjct: 3   IGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPAER 62

Query: 122 SRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL-- 179
           + ++ R AD +E   +ELA L T  NG P   S +++ P    LL YYA  A        
Sbjct: 63  AAVLRRLADALEARADELARLWTAENGMPISWSRRAQGPGPAALLRYYAALARD-FPFEE 121

Query: 180 TVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239
             PG G  H+    EP+GV   IVPWN PL L   K+APAL  G T+VLK + +TPL A 
Sbjct: 122 RRPGSGGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSPETPLDAY 181

Query: 240 YVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299
            +A+   EAGLPPGV+NVV       G  L  H  VDK+SFTG    G+ +  +     L
Sbjct: 182 LLAEAAEEAGLPPGVVNVVPA-DREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCG-ERL 239

Query: 300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 359
             VTLELGGKS  I+ DDAD+D AV     A   N GQ C A +R  V    YDE VE  
Sbjct: 240 ARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEAL 299

Query: 360 KARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG--NRGYF 417
            A      VGDP     + GP     Q ++V  YI  G    A L  GG R    +RG+F
Sbjct: 300 AAAVAALKVGDPLDPATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGWF 359

Query: 418 VQPTVFSDVT 427
           V+PT+F+DV 
Sbjct: 360 VEPTLFADVD 369

The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471

>gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like

 Score =  366 bits (941), Expect = e-123
 Identities = 156/371 (42%), Positives = 225/371 (60%), Gaps = 8/371 (2%)

Query: 61  LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYE 120
            ING++V  +SG+T   Y+P   E ++ + +    D+DRAV  A++AF    W K T  E
Sbjct: 4   FINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFKT--WRKTTVAE 61

Query: 121 RSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLT 180
           R+ I+ + AD+I++N E LA +ET +NGKP  ++   ++P+      Y+AG      G  
Sbjct: 62  RANILNKIADIIDENKELLAMVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGSA 121

Query: 181 VPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALY 240
              D +     L EPIGV GQI+PWNFP L+  WK+APAL  GNT+V+K +  T L+ L 
Sbjct: 122 NMIDEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPALAAGNTVVIKPSSTTSLSLLE 181

Query: 241 VAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLK 300
           +AK+  +  LP GV+N+V+G G  +G  L +H  +DKL+FTG  + G+ V   AAK  L 
Sbjct: 182 LAKIIQDV-LPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAAK-KLI 239

Query: 301 PVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAK 360
           P TLELGGKS  IIFDDA+ D+A+E A   + +NQGQ CCAGSR +V E +YDEFV K K
Sbjct: 240 PATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLK 299

Query: 361 ARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG----NRGY 416
            +     VG+P     + G Q++ +Q  K+L Y+    E  A +  GG RL     ++G+
Sbjct: 300 EKFENVKVGNPLDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGF 359

Query: 417 FVQPTVFSDVT 427
           F++PT+  +VT
Sbjct: 360 FIEPTLIVNVT 370

Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475

>gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like

 Score =  363 bits (934), Expect = e-122
 Identities = 162/351 (46%), Positives = 216/351 (61%), Gaps = 6/351 (1%)

Query: 80  PRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEEL 139
           P    V+A  AEG  ED+D AVA ARKAFD+GPWP+M+  ER+ ++L+ ADLI    E L
Sbjct: 4   PAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERL 63

Query: 140 AALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP--GDGNYHIQTLHEPIG 197
           A +ET  +GKP  Q+ + E+     L  Y A  A  +HG +    GD    +  L EPIG
Sbjct: 64  ALIETLESGKPISQA-RGEIEGAADLWRYAASLARTLHGDSYNNLGDDMLGL-VLREPIG 121

Query: 198 VAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNV 257
           V G I PWNFP L+ + K+  AL  G T+V+K +E T  T L +A+L  EAGLP GV+N+
Sbjct: 122 VVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTTLMLAELLIEAGLPAGVVNI 181

Query: 258 VSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDD 317
           V+GYG T G A+  H DVD +SFTG    GK +   AA+ NLK V+LELGGK+P I+F D
Sbjct: 182 VTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAAR-NLKKVSLELGGKNPQIVFAD 240

Query: 318 ADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVE 377
           AD+D A +   F +++N G+CC +GSR  VHE + D FV    AR+ +  VGDP     +
Sbjct: 241 ADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETK 300

Query: 378 QGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNR-GYFVQPTVFSDVT 427
            G  I+  Q  K+  Y+ +G    ATL  GG+RL +  G F QPT+F+DVT
Sbjct: 301 VGAIINEAQLAKITDYVDAGRAEGATLLLGGERLASAAGLFYQPTIFTDVT 351

Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454

>gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like

 Score =  363 bits (934), Expect = e-122
 Identities = 162/366 (44%), Positives = 230/366 (62%), Gaps = 14/366 (3%)

Query: 62  INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYER 121
           ING++V   + K+FP  +P T EV+A+V + + ED+D AVA AR AF+   W  +  + R
Sbjct: 26  INGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFES--WSALPGHVR 83

Query: 122 SRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTV 181
           +R + R A  I+K+    A LE+ +NGKP  +S   ++P+V R  +++AGWA  +    +
Sbjct: 84  ARHLYRIARHIQKHQRLFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQLLDT-EL 142

Query: 182 PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYV 241
            G          +P+GV GQIVPWNFPLL+  WK+ PAL  GNT+VLK AE TPLTAL  
Sbjct: 143 AG---------WKPVGVVGQIVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTALLF 193

Query: 242 AKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKP 301
           A++  EAGLPPGVLN+V+G G   G+ALA+H  VDK++FTG  + G+ ++   A +  K 
Sbjct: 194 AEICAEAGLPPGVLNIVTGNGSF-GSALANHPGVDKVAFTGSTEVGRALRRATAGTG-KK 251

Query: 302 VTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKA 361
           ++LELGGKSPFI+FDDAD+D AVE    A+++NQGQ CCAGSR  V E V +E + K K 
Sbjct: 252 LSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKLKE 311

Query: 362 RAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPT 421
           R     VGDP    ++ G  +DP Q +++   +  G    A +   G  L ++G F  PT
Sbjct: 312 RMSHLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPT 371

Query: 422 VFSDVT 427
           +F++V 
Sbjct: 372 LFTNVP 377

Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480

>gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily

 Score =  356 bits (917), Expect = e-121
 Identities = 144/261 (55%), Positives = 171/261 (65%), Gaps = 5/261 (1%)

Query: 102 ATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPM 161
           A AR AF    W  + P ER+ I+ + ADL+E+  EELAALET   GKP  ++L  EV  
Sbjct: 1   AAARAAFKA--WAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEAL-GEVAR 57

Query: 162 VVRLLHYYAGWADKIHGLTVP-GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPAL 220
            +    Y AG ADK+ G  +P  D         EP+GV G I PWNFPLLL  WK+APAL
Sbjct: 58  AIDTFRYAAGLADKLGGPELPSPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPAL 117

Query: 221 TCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSF 280
             GNT+VLK +E TPLTAL +A+L  EAGLPPGV+NVV G G   GAAL SH  VDK+SF
Sbjct: 118 AAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGGGDEVGAALLSHPRVDKISF 177

Query: 281 TGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCC 340
           TG    GK + + AA+ NLKPVTLELGGKSP I+ +DAD+D AVE A F  F+N GQ C 
Sbjct: 178 TGSTAVGKAIMKAAAE-NLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICT 236

Query: 341 AGSRTYVHERVYDEFVEKAKA 361
           A SR  VHE +YDEFVEK   
Sbjct: 237 AASRLLVHESIYDEFVEKLVT 257

The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367

>gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like

 Score =  357 bits (918), Expect = e-120
 Identities = 166/354 (46%), Positives = 204/354 (57%), Gaps = 12/354 (3%)

Query: 77  VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136
           V DP T E IA V +  A D+D AVA A  AF    W + TP ERS+ +L+ AD IE+N 
Sbjct: 1   VVDPATGEEIATVPDASAADVDAAVAAAHAAFPS--WRRTTPAERSKALLKLADAIEENA 58

Query: 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNY---HIQTL- 192
           EELAALE+ N GKP       E+P  V    ++AG A  + G   P  G Y   H   + 
Sbjct: 59  EELAALESRNTGKPLHLVRDDELPGAVDNFRFFAGAARTLEG---PAAGEYLPGHTSMIR 115

Query: 193 HEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPP 252
            EPIGV  QI PWN+PL++  WK+APAL  GNT+VLK +E TPLT L +A+L  E  LPP
Sbjct: 116 REPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLTTLLLAELAAE-VLPP 174

Query: 253 GVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPF 312
           GV+NVV G G +AG AL +H  V  +S TG   TGK V   AA   LK V LELGGK+P 
Sbjct: 175 GVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAAD-TLKRVHLELGGKAPV 233

Query: 313 IIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPF 372
           I+FDDAD+D AV     A +YN GQ C A  R YVHE VYDEFV           VGDP 
Sbjct: 234 IVFDDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPD 293

Query: 373 KSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDV 426
               E GP     Q ++V  ++     ++A +  GG R    GYF +PTV + V
Sbjct: 294 DEDTEMGPLNSAAQRERVAGFV-ERAPAHARVLTGGRRAEGPGYFYEPTVVAGV 346

NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450

>gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase

 Score =  356 bits (914), Expect = e-119
 Identities = 161/381 (42%), Positives = 222/381 (58%), Gaps = 23/381 (6%)

Query: 59  KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
            + I+G+FV + SG+TF    P T EV+ +VA G A D+DRA   A++AF    W ++  
Sbjct: 2   GHFIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFKR--WAELKA 59

Query: 119 YERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADK--- 175
            ER R + + ADLIE++ +E+A LE  + G+P  Q+ +     V+R    +  +ADK   
Sbjct: 60  AERKRYLHKIADLIEQHADEIAVLECLDCGQPLRQTRQ----QVIRAAENFRFFADKCEE 115

Query: 176 -IHGLTVPGDG--NYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAE 232
            + G T P D   NY   T+  P+G  G I PWN P +L TWK+APAL  GNT+VLK AE
Sbjct: 116 AMDGRTYPVDTHLNY---TVRVPVGPVGLITPWNAPFMLSTWKIAPALAFGNTVVLKPAE 172

Query: 233 QTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE 292
            +PLTA  +A++  EAGLP GV N+V G+G  AG AL +H DV  +SFTG   TG I+  
Sbjct: 173 WSPLTAARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMR 232

Query: 293 LAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVY 352
             A + LK  ++ELGGKSP I+FDDAD+++A++   F +F   G+ C A SR  V E + 
Sbjct: 233 NGADT-LKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIA 291

Query: 353 DEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG 412
           ++FVEK   R     VG P     E GP I PE   KVL Y+ +  +  AT+  GG+R  
Sbjct: 292 EDFVEKLVERVRAIRVGHPLDPETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAP 351

Query: 413 -------NRGYFVQPTVFSDV 426
                   RG +V PTVF+  
Sbjct: 352 TFRGEDLGRGNYVLPTVFTGA 372

This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488

>gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like

 Score =  350 bits (901), Expect = e-117
 Identities = 173/374 (46%), Positives = 226/374 (60%), Gaps = 10/374 (2%)

Query: 60  NLINGQFVDAASGKTFPVYDP-RTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
           N I G++VD+ASG+TF   +P    EV+       A D+D AV  AR+AF E  W K+  
Sbjct: 1   NYIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFPE--WRKVPA 58

Query: 119 YERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG 178
             R+  + RAA+L++K  EELA L T   GKP  +  + +V   + +  Y AG   ++ G
Sbjct: 59  PRRAEYLFRAAELLKKRKEELARLVTREMGKPLAEG-RGDVQEAIDMAQYAAGEGRRLFG 117

Query: 179 LTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLT 237
            TVP +  N    T  +PIGV   I PWNFP+ + +WK+ PAL CGNT+V K AE TP  
Sbjct: 118 ETVPSELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPAEDTPAC 177

Query: 238 ALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKS 297
           AL + +LF EAGLPPGV+NVV G G   G AL  H DVD +SFTG  + G+ + E  A+ 
Sbjct: 178 ALKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCARP 237

Query: 298 NLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVE 357
           N K V LE+GGK+P I+ DDAD+D A+E A ++ F   GQ C A SR  VHE VYDEF++
Sbjct: 238 N-KRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLK 296

Query: 358 KAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRL----GN 413
           +   RA R  VGD      + GP I+  Q +KVL Y   G E  ATL  GG+RL      
Sbjct: 297 RFVERAKRLRVGDGLDEETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYE 356

Query: 414 RGYFVQPTVFSDVT 427
           +GYFV+PTVF+DVT
Sbjct: 357 KGYFVEPTVFTDVT 370

Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478

>gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins

 Score =  349 bits (898), Expect = e-117
 Identities = 140/360 (38%), Positives = 184/360 (51%), Gaps = 13/360 (3%)

Query: 77  VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136
           V +P T EVI    +  A D+D A+A AR+AFD G W      ER+R + +  + +E   
Sbjct: 1   VINPATEEVIGTAPDAGAADVDAAIAAARRAFDTGDW-STDAEERARCLRQLHEALEARK 59

Query: 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG-LTVPGDGNYHIQTL--- 192
           EEL AL     G P + +   +V   +  L Y+A  AD       +P             
Sbjct: 60  EELRALLVAEVGAPVMTARAMQVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVV 119

Query: 193 -HEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLP 251
             EP+GV   I PWNFP  L   K+APAL  GNT+VLK A  TPL+AL + ++  E  LP
Sbjct: 120 RREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLSALLLGEIIAETDLP 179

Query: 252 PGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSP 311
            GV+NVV+G     G AL +   VD +SFTG    G+ +   AA + LK V LELGGKS 
Sbjct: 180 AGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAA-ATLKRVLLELGGKSA 238

Query: 312 FIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKA--RAMRRIVG 369
            I+ DDAD+  A   A     +N GQ C   +R  V    YDE VE   A   A+   VG
Sbjct: 239 NIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALP--VG 296

Query: 370 DPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRL--GNRGYFVQPTVFSDVT 427
           DP   G   GP I   Q  +V  YI  G +  A L  GG R    ++G++V+PT+F+DV 
Sbjct: 297 DPADPGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVD 356

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459

>gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like

 Score =  348 bits (894), Expect = e-116
 Identities = 158/359 (44%), Positives = 207/359 (57%), Gaps = 10/359 (2%)

Query: 77  VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136
           V +P T +VI  V    A D+DRAVA A+ AF    W      ER +++ R AD +E   
Sbjct: 1   VINPATGQVIGEVPRSRAADVDRAVAAAKAAF--PEWAATPARERGKLLARIADALEARS 58

Query: 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPI 196
           EELA L     G       + E  ++  L  Y+ G A ++ G T+P   +    T+ EP+
Sbjct: 59  EELARLLALETGNALRTQARPEAAVLADLFRYFGGLAGELKGETLPFGPDVLTYTVREPL 118

Query: 197 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLN 256
           GV G I+PWN PL+L   K+APAL  GNT+VLK+AE  PL  L +A++  +  LP GVLN
Sbjct: 119 GVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAVLLLAEILAQV-LPAGVLN 177

Query: 257 VVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFD 316
           V++GYG   GAAL  H DVDK++FTG  + GKI+   AA   L PV+LELGGKSP I+F 
Sbjct: 178 VITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAAD-RLIPVSLELGGKSPMIVFP 236

Query: 317 DADVDQAVELAHFAL-FYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG 375
           DAD+D AV+ A   + F  QGQ C AGSR +VHE +YD F+EK  A+  +  +GDP    
Sbjct: 237 DADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEA 296

Query: 376 VEQGPQIDPEQFQKVLRYIRSGIE-SNAT-LECGGDRLGNR---GYFVQPTVFSDVTVS 429
            + G  I  +QF KV  YI  G+  S AT L  G          G+FVQPT+FS V   
Sbjct: 297 TDIGAIISEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNE 355

NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457

>gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase

 Score =  348 bits (895), Expect = e-116
 Identities = 166/379 (43%), Positives = 225/379 (59%), Gaps = 15/379 (3%)

Query: 62  INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDE---GPWPKMTP 118
           I G++ +   GK  PV +P T E I ++    AED+D AV  ARKAF       W + T 
Sbjct: 12  IGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKAFKRNKGKDWARTTG 71

Query: 119 YERSRIMLRA-ADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
             R++  LRA A  I +   ELA LET + GKP  ++   ++  V     YYA  A+ + 
Sbjct: 72  AVRAKY-LRAIAAKITERKSELAKLETLDCGKPLDEAA-WDMDDVAGCFEYYADLAEALD 129

Query: 178 G-----LTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAE 232
                 +++P +  +    L EP+GV G I PWN+PLL+ TWKVAPAL  G T VLK +E
Sbjct: 130 AKQKAPVSLPME-TFKGYVLKEPLGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKPSE 188

Query: 233 QTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE 292
              +T L +A +  E GLPPGVLNVV+G G  AGA LASH  VDK++FTG   TG+ +  
Sbjct: 189 LASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATGRKIMT 248

Query: 293 LAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVY 352
            AA+  +KPV+LELGGKSP I+FDD D+D+AVE A F  F+  GQ C A SR  VHER+ 
Sbjct: 249 AAAQ-MVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIA 307

Query: 353 DEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG 412
            EF+EK    A    + DP + G   GP +   Q++KVL++I +     AT+ CGG R  
Sbjct: 308 SEFLEKLVKWAKNIKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPE 367

Query: 413 --NRGYFVQPTVFSDVTVS 429
              +G+F++PT+ +DVT S
Sbjct: 368 HLKKGFFIEPTIITDVTTS 386

Length = 503

>gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional

 Score =  346 bits (890), Expect = e-115
 Identities = 156/370 (42%), Positives = 213/370 (57%), Gaps = 3/370 (0%)

Query: 58  TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
            +  ING++  AA  +TF   DP T   +A +A G + DIDRAV+ AR  F+ G W   +
Sbjct: 20  NRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSS 79

Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
           P +R  ++ + ADL+E + EELA LET + GKP   SL+ ++P   R + +YA   DK++
Sbjct: 80  PAKRKAVLNKLADLMEAHAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVY 139

Query: 178 GLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLT 237
           G       +     + EP+GV   IVPWNFPLLL  WK+ PAL  GN+++LK +E++PL+
Sbjct: 140 GEVATTSSHELAMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLS 199

Query: 238 ALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKS 297
           A+ +A L  EAGLP GVLNVV+G+G  AG AL+ H D+D ++FTG   TGK + + A  S
Sbjct: 200 AIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDS 259

Query: 298 NLKPVTLELGGKSPFIIFDDA-DVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 356
           N+K V LE GGKS  I+F D  D+ QA       +FYNQGQ C AG+R  + E + DEF+
Sbjct: 260 NMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFL 319

Query: 357 EKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGY 416
              K +A     G P       G  ID      V  +IR G ES   L   G   G    
Sbjct: 320 ALLKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHSFIREG-ESKGQLLLDGRNAGLAAA 378

Query: 417 FVQPTVFSDV 426
            + PT+F DV
Sbjct: 379 -IGPTIFVDV 387

Length = 494

>gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like

 Score =  343 bits (882), Expect = e-114
 Identities = 168/367 (45%), Positives = 206/367 (56%), Gaps = 9/367 (2%)

Query: 62  INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYER 121
           I+G+ V   S K   + +P T +VIA+VA     D+D AVA+A +AF    W K TP ER
Sbjct: 4   IDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFV-SAWAKTTPAER 62

Query: 122 SRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTV 181
            RI+LR ADLIE++ EELA LET  +GK    S   EV      L Y+AGWA KI+G T+
Sbjct: 63  GRILLRLADLIEQHGEELAQLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGETL 122

Query: 182 ------PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTP 235
                      Y   T  EP+GV   IVPWNF +++  WK+  AL  G TIV+K +E TP
Sbjct: 123 APSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVWKIGAALATGCTIVIKPSEFTP 182

Query: 236 LTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA 295
           LT L VA+L  EAG+P GVLNVV+G G   GA L SH DV K+SFTG   TGK +   AA
Sbjct: 183 LTLLRVAELAKEAGIPDGVLNVVNGKGAV-GAQLISHPDVAKVSFTGSVATGKKIGRQAA 241

Query: 296 KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEF 355
            S+L  VTLELGGK+      DAD+D  VE    A F +QGQ C A  R YVH   +DE 
Sbjct: 242 -SDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDEL 300

Query: 356 VEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRG 415
           V K K       VG P    V  GP  +   F KV  Y+         +  GG+ L   G
Sbjct: 301 VTKLKQALSSFQVGSPMDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAGEG 360

Query: 416 YFVQPTV 422
           YFVQPT+
Sbjct: 361 YFVQPTL 367

NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477

>gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like

 Score =  334 bits (859), Expect = e-110
 Identities = 157/376 (41%), Positives = 215/376 (57%), Gaps = 18/376 (4%)

Query: 60  NLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPY 119
           N I G++V    G+ F    P T +V   V    AEDI+ A+  A  A +   W K +  
Sbjct: 3   NFIGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKEA--WGKTSVA 60

Query: 120 ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL 179
           ER+ I+ + AD +E N+E LA  ETW+NGKP  ++L +++P+ +    Y+AG      G 
Sbjct: 61  ERANILNKIADRMEANLEMLAVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGS 120

Query: 180 TVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239
               D N      HEP+GV GQI+PWNFPLL+ TWK+APAL  GN +VLK AEQTP + L
Sbjct: 121 ISEIDENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPAEQTPASIL 180

Query: 240 YVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299
            + +L  +  LPPGV+NVV+G+G  AG  LAS   + K++FTG   TG+++ + A++ N+
Sbjct: 181 VLMELIGDL-LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYASE-NI 238

Query: 300 KPVTLELGGKSPFIIF------DDADVDQAVE-LAHFALFYNQGQCCCAGSRTYVHERVY 352
            PVTLELGGKSP I F      DDA  D+A+E    FAL  NQG+ C   SR  + E +Y
Sbjct: 239 IPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFAL--NQGEVCTCPSRALIQESIY 296

Query: 353 DEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDR-- 410
           D F+E+A  R      G+P  +    G Q   EQ +K+L YI  G E  A +  GG+R  
Sbjct: 297 DRFMERALERVKAIKQGNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNE 356

Query: 411 ---LGNRGYFVQPTVF 423
              L   GY+V  T  
Sbjct: 357 LGGLLGGGYYVPTTFK 372

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479

>gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins

 Score =  325 bits (835), Expect = e-107
 Identities = 142/337 (42%), Positives = 183/337 (54%), Gaps = 15/337 (4%)

Query: 96  DIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAAL---ETWNNGKPYV 152
           D+DRA A A  A     W    P ER+ I+ +AA+++E+  +E+A     E+   G    
Sbjct: 1   DVDRAYAAAAAAQKA--WAATPPQERAAILRKAAEILEERRDEIADWLIRES---GSTRP 55

Query: 153 QSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQ-TLHEPIGVAGQIVPWNFPLLL 211
           ++   EV   + +L   AG   +  G  +P D           P+GV G I P+NFPL+L
Sbjct: 56  KAA-FEVGAAIAILREAAGLPRRPEGEILPSDVPGKESMVRRVPLGVVGVISPFNFPLIL 114

Query: 212 FTWKVAPALTCGNTIVLKSAEQTPLT-ALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALA 270
               VAPAL  GN +VLK   +TP+T  L +A++F EAGLP GVLNVV G G   G AL 
Sbjct: 115 AMRSVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKGVLNVVPGGGSEIGDALV 174

Query: 271 SHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFA 330
            H  V  +SFTG    G+ + ELA + +LK V LELGG +P I+ DDAD+D AV  A F 
Sbjct: 175 EHPRVRMISFTGSTAVGRHIGELAGR-HLKKVALELGGNNPLIVLDDADLDLAVSAAAFG 233

Query: 331 LFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKV 390
            F +QGQ C A  R  VHE VYDEFVEK  A+A    VGDP       GP I+  Q  +V
Sbjct: 234 AFLHQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRV 293

Query: 391 LRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVT 427
              +   + + A L  GG   G    F QPTV SDVT
Sbjct: 294 HAIVEDAVAAGARLLTGGTYEGL---FYQPTVLSDVT 327

ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431

>gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like

 Score =  324 bits (833), Expect = e-107
 Identities = 149/351 (42%), Positives = 182/351 (51%), Gaps = 8/351 (2%)

Query: 77  VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136
           V +P T EV A+        +D+AVA A+ AF    W      ER   +L  AD IE N 
Sbjct: 1   VINPATGEVFASAPVASEAQLDQAVAAAKAAFPG--WSATPLEERRAALLAIADAIEANA 58

Query: 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPI 196
           EELA L T   GKP  ++ + EV   V  L Y A          +  D    ++   +P+
Sbjct: 59  EELARLLTLEQGKPLAEA-QFEVGGAVAWLRYTASLDLPDE--VIEDDDTRRVELRRKPL 115

Query: 197 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLN 256
           GV   IVPWNFPLLL  WK+APAL  GNT+VLK +  TPL  L + +L  E  LPPGVLN
Sbjct: 116 GVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCTLKLGELAQEV-LPPGVLN 174

Query: 257 VVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFD 316
           VVSG G   G AL SH D+ K+SFTG   TGK V   AAK  LK VTLELGG    I+  
Sbjct: 175 VVSG-GDELGPALTSHPDIRKISFTGSTATGKKVMASAAK-TLKRVTLELGGNDAAIVLP 232

Query: 317 DADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGV 376
           D D+D       +  F N GQ C A  R YVHE +YDEF E   A A   +VGD    G 
Sbjct: 233 DVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGT 292

Query: 377 EQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVT 427
             GP  +  Q+ KV   +       A +  GG+ L   GYF+ PT+  D  
Sbjct: 293 TLGPVQNKMQYDKVKELVEDAKAKGAKVLAGGEPLDGPGYFIPPTIVDDPP 343

Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446

>gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase

 Score =  323 bits (829), Expect = e-106
 Identities = 165/371 (44%), Positives = 221/371 (59%), Gaps = 5/371 (1%)

Query: 58  TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
           T+ LI G++ DA  GKTFPVY+P T EVIANV      + + A+A+A  AF    W K+T
Sbjct: 25  TQGLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFP--SWSKLT 82

Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
             ERS+I+ R  DLI  N E+LA L T   GKP  +++  EV      L Y+A  A +++
Sbjct: 83  ASERSKILRRWYDLIIANKEDLAQLMTLEQGKPLKEAI-GEVAYGASFLEYFAEEAKRVY 141

Query: 178 GLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
           G  +P    +  +  L +P+GV G I PWNFPL + T KV PAL  G T+V+K +E TPL
Sbjct: 142 GDIIPSPFPDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALAAGCTVVVKPSELTPL 201

Query: 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
           TAL  A+L  +AG+PPGVLNVV G  P  G AL +   V K++FTG    GK +   AA 
Sbjct: 202 TALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGAAA 261

Query: 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 356
           + +K V+LELGG +PFI+FDDAD+D AV+ A  + F N GQ C   +R  V E +YD+F 
Sbjct: 262 T-VKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFA 320

Query: 357 EKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGY 416
           E       + +VGD F+ GV QGP I+    QKV  +++  +   A +  GG R    G 
Sbjct: 321 EAFSKAVQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGT 380

Query: 417 FVQPTVFSDVT 427
           F +PTV  DVT
Sbjct: 381 FYEPTVLGDVT 391

Length = 498

>gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like

 Score =  321 bits (825), Expect = e-106
 Identities = 147/354 (41%), Positives = 199/354 (56%), Gaps = 8/354 (2%)

Query: 75  FPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK 134
           F   +P    V A VA G  +D +RA+A A  AF    W   TP ER RI+L+AA+++E+
Sbjct: 1   FDDLNPADGSVYARVAVGSRQDAERAIAAAYDAF--PAWAATTPSERERILLKAAEIMER 58

Query: 135 NMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQ-TLH 193
             ++L  L     G  Y ++   E      LL   AG   ++ G T+P D    +  ++ 
Sbjct: 59  RADDLIDLLIDEGGSTYGKAW-FETTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVR 117

Query: 194 EPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPG 253
            P+GV   I P+N+PL+L T KVA AL  GNT+VLK +E+TP+  L +A++  EAGLP G
Sbjct: 118 RPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVIGLKIAEIMEEAGLPKG 177

Query: 254 VLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFI 313
           V NVV+G G   G  L     V  ++FTG    G+ + E A + +LK +TLELGGK+P I
Sbjct: 178 VFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGR-HLKKITLELGGKNPLI 236

Query: 314 IFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFK 373
           +  DAD+D AV  A F  F +QGQ C + SR  V E VYDEFV+K  ARA +  VGDP  
Sbjct: 237 VLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRD 296

Query: 374 SGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVT 427
                GP I P Q +++ R +   +   A L  GG   GN   F QPTV +DVT
Sbjct: 297 PDTVIGPLISPRQVERIKRQVEDAVAKGAKLLTGGKYDGN---FYQPTVLTDVT 347

Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451

>gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

 Score =  319 bits (819), Expect = e-105
 Identities = 140/361 (38%), Positives = 194/361 (53%), Gaps = 20/361 (5%)

Query: 75  FPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK 134
             V  P   EVI  V     ED+++A+A A++   E     +  YER+ I+ RAA L+E+
Sbjct: 1   IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAKEMK--SLPAYERAEILERAAQLLEE 58

Query: 135 NMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGN-------- 186
             EE A       GKP   + K EV   +  L   A  A ++ G T+P D +        
Sbjct: 59  RREEFARTIALEAGKPIKDARK-EVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIG 117

Query: 187 YHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFH 246
           +   T+ EPIGV   I P+NFPL L   KV PA+  GN +VLK A QTPL+AL +A+L  
Sbjct: 118 F---TIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPASQTPLSALKLAELLL 174

Query: 247 EAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLEL 306
           EAGLP G LNVV+G G T G AL +   V  +SFTG    G+ +     K+ LK VTLEL
Sbjct: 175 EAGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIAR---KAGLKKVTLEL 231

Query: 307 GGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRR 366
           G  +  I+  DAD+++AVE      F N GQ C +  R +VHE +YDEF+E+  A   + 
Sbjct: 232 GSNAAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKL 291

Query: 367 IVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDV 426
           +VGDP     + GP I   + +++  ++   +E  A L  GG R G     ++PTV +DV
Sbjct: 292 VVGDPLDEDTDVGPMISEAEAERIEEWVEEAVEGGARLLTGGKRDGA---ILEPTVLTDV 348

Query: 427 T 427
            
Sbjct: 349 P 349

Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453

>gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA

 Score =  316 bits (813), Expect = e-103
 Identities = 144/374 (38%), Positives = 199/374 (53%), Gaps = 14/374 (3%)

Query: 61  LINGQFVDAASGKTFPVYDP-RTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPY 119
           +I G+ V   + +     +P   +EV+  V +   E+ + AV  AR AF    W +  P 
Sbjct: 36  VIGGKEVR--TEEKIESRNPADPSEVLGTVQKATKEEAEAAVQAARAAFPT--WRRTPPE 91

Query: 120 ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL 179
           ER+R++LRAA L+ +   ELAA      GK + ++  ++V   +  L YYA    ++ G 
Sbjct: 92  ERARLLLRAAALLRRRRFELAAWMVLEVGKNWAEAD-ADVAEAIDFLEYYAREMLRLRGF 150

Query: 180 TVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239
            V        + ++ P+GV   I PWNFPL +       AL  GNT+VLK AE TP+ A 
Sbjct: 151 PVEMVPGEDNRYVYRPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAA 210

Query: 240 YVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK--- 296
            + ++  EAGLPPGV+N + G G   G  L  H DV  ++FTG  + G  + E AAK   
Sbjct: 211 KLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQP 270

Query: 297 --SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDE 354
               LK V  E+GGK+  I+ +DAD+D+A E    + F  QGQ C A SR  VHE VYDE
Sbjct: 271 GQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDE 330

Query: 355 FVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGN- 413
           F+E+   R     VGDP    V  GP ID     ++ RYI  G +S   L  GG+ L   
Sbjct: 331 FLERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIG-KSEGRLLLGGEVLELA 389

Query: 414 -RGYFVQPTVFSDV 426
             GYFVQPT+F+DV
Sbjct: 390 AEGYFVQPTIFADV 403

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512

>gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like

 Score =  312 bits (802), Expect = e-102
 Identities = 145/358 (40%), Positives = 203/358 (56%), Gaps = 10/358 (2%)

Query: 77  VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136
           V +P T +V+A V    A D+DRAVA AR AF E  W   TP ER+R++   A  + ++ 
Sbjct: 1   VINPATGQVLARVPAASAADVDRAVAAARAAFPE--WRATTPLERARMLRELATRLREHA 58

Query: 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPI 196
           EELA ++  + G P   ++  +V +   LL Y+AG   ++ G T+P  G     TL EP 
Sbjct: 59  EELALIDALDCGNPV-SAMLGDVMVAAALLDYFAGLVTELKGETIPVGGRNLHYTLREPY 117

Query: 197 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLN 256
           GV  +IV +N PL+    K+A  L  GNT+V+K  EQ PL+AL +A+L  E  LPPGV N
Sbjct: 118 GVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSALRLAELAREV-LPPGVFN 176

Query: 257 VVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFD 316
           ++ G G TAGAAL  H DV +++  G   TG+ +   AA+  +K VTLELGGK+  I+F 
Sbjct: 177 ILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEG-IKHVTLELGGKNALIVFP 235

Query: 317 DADVDQAVELAHFAL-FYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG 375
           DAD + A + A   + F   GQ C + SR +VHE +YDE + +   R     VGDP    
Sbjct: 236 DADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPA 295

Query: 376 VEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDR----LGNRGYFVQPTVFSDVTVS 429
              GP +  +Q+ +V+ YI S     A L  GG R        G++V+PTVF+DVT  
Sbjct: 296 TTMGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPG 353

Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456

>gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins

 Score =  312 bits (801), Expect = e-102
 Identities = 139/376 (36%), Positives = 196/376 (52%), Gaps = 15/376 (3%)

Query: 60  NLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPY 119
            +I G++V +  G+TF   +P   E IA V     ED++ AVA AR+AF E  W K+   
Sbjct: 1   GVIGGEWVGSG-GETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFKE--WRKVPAP 57

Query: 120 ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL 179
            R  I+ +  + + K  E L  L +   GK   + L  EV  ++ +  Y  G +  ++GL
Sbjct: 58  RRGEIVRQIGEALRKKKEALGRLVSLEMGKILPEGL-GEVQEMIDICDYAVGLSRMLYGL 116

Query: 180 TVPGDGNYH--IQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLT 237
           T+P +   H  ++  + P+GV G I  +NFP+ +  W  A AL CGNT+V K +E TPLT
Sbjct: 117 TIPSERPGHRLMEQWN-PLGVVGVITAFNFPVAVPGWNAAIALVCGNTVVWKPSETTPLT 175

Query: 238 ALYVAKLFHEA----GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQEL 293
           A+ V K+  E     GLPPGV+N+V+G G   G  L     V  +SFTG  + G+ V E 
Sbjct: 176 AIAVTKILAEVLEKNGLPPGVVNLVTGGGD-GGELLVHDPRVPLVSFTGSTEVGRRVGET 234

Query: 294 AAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYD 353
            A+     V LELGG +  I+ DDAD+D AV    FA     GQ C    R  VHE VYD
Sbjct: 235 VARRF-GRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYD 293

Query: 354 EFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRL-- 411
           EF+E+      +  +GDP   G   GP I+    +K L  I        T+  GG R+  
Sbjct: 294 EFLERLVKAYKQVRIGDPLDEGTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDG 353

Query: 412 GNRGYFVQPTVFSDVT 427
           G  G +V+PT+ + VT
Sbjct: 354 GEPGNYVEPTIVTGVT 369

ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478

>gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase

 Score =  305 bits (782), Expect = 4e-99
 Identities = 156/388 (40%), Positives = 207/388 (53%), Gaps = 32/388 (8%)

Query: 59  KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
           +N ING FV   SGKTF   +P    VIA V E  A ++D AVA AR A  +GPW KMT 
Sbjct: 2   RNFINGAFV--ESGKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAAL-KGPWGKMTV 58

Query: 119 YERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG 178
            ER+ ++   AD IE+  ++  A E  + GKP   +   ++P   R    +  +AD +  
Sbjct: 59  AERADLLYAVADEIERRFDDFLAAEVADTGKPRSLASHLDIP---RGAANFRVFADVVK- 114

Query: 179 LTVPG--------DG----NYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTI 226
              P         DG    NY    + +P+GV G I PWN PLLL TWKV PAL CGNT+
Sbjct: 115 -NAPTECFEMATPDGKGALNY---AVRKPLGVVGVISPWNLPLLLMTWKVGPALACGNTV 170

Query: 227 VLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGP-TAGAALASHMDVDKLSFTGHCD 285
           V+K +E+TP TA  + ++ +  G+P GV NVV G+GP +AG  L  H  VD ++FTG   
Sbjct: 171 VVKPSEETPGTATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETR 230

Query: 286 TGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRT 345
           TG  + + AA   +KPV+ ELGGK+  I+F D D D AV     + F N GQ C    R 
Sbjct: 231 TGSAIMKAAADG-VKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERV 289

Query: 346 YVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLE 405
           YV   ++D FV   KARA    +G P       GP I  E   KVL Y    +E  AT+ 
Sbjct: 290 YVERPIFDRFVAALKARAESLKIGVPDDPATNMGPLISAEHRDKVLSYYALAVEEGATVV 349

Query: 406 CGG------DRLGNRGYFVQPTVFSDVT 427
            GG      D L   G +VQPT+++ + 
Sbjct: 350 TGGGVPDFGDALAG-GAWVQPTIWTGLP 376

Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481

>gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase

 Score =  300 bits (770), Expect = 1e-97
 Identities = 145/373 (38%), Positives = 218/373 (58%), Gaps = 10/373 (2%)

Query: 77  VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136
           VY+P T E+I +V +   ++ + A+  A +AF    W   T  ERS ++ +  +L+ +N 
Sbjct: 1   VYNPATGEIIGSVPDQGVDETEAAIRAAYEAFKT--WRATTAKERSSLLRKWYNLMMENK 58

Query: 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEP 195
           ++LA L T  NGKP  ++ K E+      L ++A  A +++G T+P    +  +  + +P
Sbjct: 59  DDLARLITLENGKPLKEA-KGEILYAASFLEWFAEEAKRVYGDTIPSPQSDKRLIVIKQP 117

Query: 196 IGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVL 255
           +GV   I PWNFP  + T K   AL  G T+V+K AEQTPL+AL +A+L  +AG+P GVL
Sbjct: 118 VGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSALALARLAEQAGIPKGVL 177

Query: 256 NVVSG-YGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFII 314
           NV++G      G  L +   V K+SFTG  + GKI+ + +A + +K V++ELGG +PFI+
Sbjct: 178 NVITGSRAKEVGNVLTTSPLVRKISFTGSTNVGKILMKQSAST-VKKVSMELGGNAPFIV 236

Query: 315 FDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKS 374
           FDDAD+DQAVE A  + F N GQ C   +R YVH+ +YDEF +K      +  VG+    
Sbjct: 237 FDDADLDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDE 296

Query: 375 GVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLL 434
           GV QGP I+ +  +KV ++I   +E  A +  GG R    G F +PTV S+VT   +   
Sbjct: 297 GVTQGPLINEKAVEKVEKHIADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTADMLVSK 356

Query: 435 Q--F--LIPIFSF 443
           +  F  L P+F F
Sbjct: 357 EETFGPLAPVFKF 369

Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448

>gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like

 Score =  292 bits (749), Expect = 3e-94
 Identities = 149/369 (40%), Positives = 196/369 (53%), Gaps = 15/369 (4%)

Query: 64  GQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSR 123
           G++ D  S +T  V +P T E +A +     ED+D A   A  A  E  W    P ER+ 
Sbjct: 1   GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQKE--WAATLPQERAE 58

Query: 124 IMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL---- 179
           I+ +AA ++E+  +E+       +G   +++   E    + +    A +  ++ G     
Sbjct: 59  ILEKAAQILEERRDEIVEWLIRESGSTRIKA-NIEWGAAMAITREAATFPLRMEGRILPS 117

Query: 180 TVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA- 238
            VPG  N       EP+GV G I PWNFPL L    VAPAL  GN +VLK A  TP+T  
Sbjct: 118 DVPGKENR---VYREPLGVVGVISPWNFPLHLSMRSVAPALALGNAVVLKPASDTPITGG 174

Query: 239 LYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN 298
           L +AK+F EAGLP GVLNVV G G   G A   H     +SFTG    G+ + ELA + +
Sbjct: 175 LLLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGR-H 233

Query: 299 LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 358
           LK V LELGG +PF++ +DAD+D AV  A F  F +QGQ C A +R  VHE VYDEFVEK
Sbjct: 234 LKKVALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEK 293

Query: 359 AKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFV 418
              R      GDP       GP I+  Q   +L  I   +E  ATL  GG+  GN    +
Sbjct: 294 FVERVKALPYGDPSDPDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGEAEGN---VL 350

Query: 419 QPTVFSDVT 427
           +PTV SDVT
Sbjct: 351 EPTVLSDVT 359

NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465

>gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like

 Score =  286 bits (733), Expect = 5e-92
 Identities = 138/358 (38%), Positives = 192/358 (53%), Gaps = 11/358 (3%)

Query: 75  FPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK 134
             V +P   EVI  V     E++  A+  A KA D      +  Y+R +I+++ A+LIE+
Sbjct: 1   IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKDV--MSNLPAYKRYKILMKVAELIER 58

Query: 135 NMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDG-----NYHI 189
             EELA L T   GKP  QS + EV   +RL    A  A  + G T+P D          
Sbjct: 59  RKEELAKLLTIEVGKPIKQS-RVEVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIA 117

Query: 190 QTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAG 249
            T+ EPIGV G I P+NFP  LF  K+APA+  GN++V+K +  TPLTA+ +AK+  EAG
Sbjct: 118 FTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSSNTPLTAIELAKILEEAG 177

Query: 250 LPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGK 309
           LPPGV+NVV+GYG   G  + ++  V+ +SFTG    G ++    A    K V LELGG 
Sbjct: 178 LPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIAS-KAGGTGKKVALELGGS 236

Query: 310 SPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVG 369
            P I+  DAD+++AV +A    F N GQ C A  R  V E VYD+F++    +  +  VG
Sbjct: 237 DPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVG 296

Query: 370 DPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVT 427
           DP     + GP I PE  +++   +   +E    +  GG R    G F  PTV  + T
Sbjct: 297 DPLDESTDLGPLISPEAVERMENLVNDAVEKGGKILYGGKRDE--GSFFPPTVLENDT 352

NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456

>gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional

 Score =  286 bits (734), Expect = 1e-91
 Identities = 130/376 (34%), Positives = 191/376 (50%), Gaps = 20/376 (5%)

Query: 61  LINGQFVDAASGKTFPVYDP-RTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPY 119
           +I G+ +           +P   +EV+  V++   E  ++A+  A +AF+   W K +P 
Sbjct: 40  IIGGERITTE--DKIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFET--WKKWSPE 95

Query: 120 ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYA----GWADK 175
           +R+RI+LRAA +I +   E +A      GKP+ ++  ++    +  L YYA      AD 
Sbjct: 96  DRARILLRAAAIIRRRKHEFSAWLVKEAGKPWAEA-DADTAEAIDFLEYYARQMLKLADG 154

Query: 176 IHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTP 235
               + PG+ N   +  + P+GV   I PWNFP  +       A+  GNT++LK A  TP
Sbjct: 155 KPVESRPGEHN---RYFYIPLGVGVVISPWNFPFAIMAGMTLAAIVAGNTVLLKPASDTP 211

Query: 236 LTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA 295
           + A    ++  EAGLP GV+N V G G   G  L  H     ++FTG  + G  + E AA
Sbjct: 212 VIAAKFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYERAA 271

Query: 296 KSN-----LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHER 350
           K       LK V  E+GGK   ++ +DAD+D A E    + F   GQ C A SR  VHE 
Sbjct: 272 KVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHED 331

Query: 351 VYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDR 410
           VYDE +EK         VG+P  +    GP I+   F K++ YI  G E    L  GG+ 
Sbjct: 332 VYDEVLEKVVELTKELTVGNPEDNAY-MGPVINQASFDKIMSYIEIGKEE-GRLVLGGEG 389

Query: 411 LGNRGYFVQPTVFSDV 426
             ++GYF+QPT+F+DV
Sbjct: 390 DDSKGYFIQPTIFADV 405

Length = 514

>gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase

 Score =  279 bits (716), Expect = 2e-89
 Identities = 144/372 (38%), Positives = 200/372 (53%), Gaps = 13/372 (3%)

Query: 59  KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
           K LING+ V    G+  PVY+P T EVI  +AE  AE +D AV  A  AF E  W + TP
Sbjct: 3   KLLINGELVSG-EGEKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFAE--WGQTTP 59

Query: 119 YERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG 178
             R+  +L+ AD+IE+N +  A LE+ N GKP       E+P +V +  ++AG A  + G
Sbjct: 60  KARAECLLKLADVIEENAQVFAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSG 119

Query: 179 LTVPGDGNY---HIQTLH-EPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQT 234
           L     G Y   H   +  +P+GV   I PWN+PL++  WK+APAL  GN +VLK +E T
Sbjct: 120 LAA---GEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEIT 176

Query: 235 PLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA 294
           PLTAL +A+L  +   P GV+N++ G G T G  L  H  V  +S TG   TG+ +    
Sbjct: 177 PLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHT 235

Query: 295 AKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDE 354
           A S +K   +ELGGK+P I+FDDAD+D  VE      FYN GQ C A  R Y    +YD 
Sbjct: 236 APS-IKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDT 294

Query: 355 FVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYI-RSGIESNATLECGGDRLGN 413
            VEK  A       G P     E GP       ++V++ +  +    +  +  GG++   
Sbjct: 295 LVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKG 354

Query: 414 RGYFVQPTVFSD 425
            GY+  PT+ + 
Sbjct: 355 NGYYFAPTLLAG 366

Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472

>gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional

 Score =  278 bits (712), Expect = 9e-89
 Identities = 149/388 (38%), Positives = 217/388 (55%), Gaps = 9/388 (2%)

Query: 61  LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYE 120
           LING+++DA +G+   V +P   + + +V +  A++   A+  A +A     W  +T  E
Sbjct: 14  LINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTAKE 71

Query: 121 RSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLT 180
           R+ I+ R  +L+ ++ ++LA L T   GKP  ++ K E+      + ++A    +I+G T
Sbjct: 72  RANILRRWFNLMMEHQDDLARLMTLEQGKPLAEA-KGEISYAASFIEWFAEEGKRIYGDT 130

Query: 181 VPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239
           +PG   +  +  + +PIGV   I PWNFP  + T K  PAL  G T+VLK A QTP +AL
Sbjct: 131 IPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSAL 190

Query: 240 YVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299
            +A+L   AG+P GV NVV+G     G  L S+  V KLSFTG  + G+ + E  AK ++
Sbjct: 191 ALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCAK-DI 249

Query: 300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 359
           K V+LELGG +PFI+FDDAD+D+AVE A  + F N GQ C   +R YV + VYD F EK 
Sbjct: 250 KKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKL 309

Query: 360 KARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQ 419
           +    +  +GD  + GV  GP ID +   KV  +I   +E  A + CGG      G F Q
Sbjct: 310 QQAVSKLHIGDGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFFQ 369

Query: 420 PTVFSDV----TVSFISLLQFLIPIFSF 443
           PT+  DV     V+       L P+F F
Sbjct: 370 PTILVDVPANAKVAKEETFGPLAPLFRF 397

Length = 482

>gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2

 Score =  277 bits (710), Expect = 2e-88
 Identities = 126/375 (33%), Positives = 187/375 (49%), Gaps = 10/375 (2%)

Query: 58  TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
            K  ING++V++ + +   VY+P T EVIA V    AE++D AVA A+ AF    W    
Sbjct: 1   LKLFINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFPA--WSATP 58

Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
             +R ++M +   L+E+N++ELA L T  +GK    + + +V   + ++ +       + 
Sbjct: 59  VLKRQQVMFKFRQLLEENLDELARLITLEHGKTLADA-RGDVLRGLEVVEFACSIPHLLK 117

Query: 178 GLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
           G  +          +  +P+GV   I P+NFP ++  W    A+ CGNT VLK +E+ P 
Sbjct: 118 GEYLENVARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFPMAIACGNTFVLKPSERVPG 177

Query: 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
            A+ +A+L  EAGLP GVLNVV G G  A  AL  H D+  +SF G    G+ + E AA 
Sbjct: 178 AAMRLAELLQEAGLPDGVLNVVHG-GKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAA 236

Query: 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 356
           +  K V    G K+  ++  DAD++Q       A F   GQ C A S         DE++
Sbjct: 237 NG-KRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWI 295

Query: 357 EKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRL----G 412
            K   RA +  VG     G + GP I P   +++   I SG+E  A L   G  +     
Sbjct: 296 PKLVERAKKLKVGAGDDPGADMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGY 355

Query: 413 NRGYFVQPTVFSDVT 427
             G FV PT+  +VT
Sbjct: 356 ENGNFVGPTILDNVT 370

Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478

>gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like

 Score =  275 bits (706), Expect = 4e-88
 Identities = 133/353 (37%), Positives = 184/353 (52%), Gaps = 9/353 (2%)

Query: 78  YDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME 137
            DP T EVI   A+G   + + A+A AR+AFDE  W    P  R+R++L  AD  E N E
Sbjct: 2   IDPATGEVIGTYADGGVAEAEAAIAAARRAFDETDW-AHDPRLRARVLLELADAFEANAE 60

Query: 138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTV-PGDGNYHIQTLHEPI 196
            LA L    NGK   ++ + E+   +  L YYAG A    G  + P  G++ +  L EP+
Sbjct: 61  RLARLLALENGKILGEA-RFEISGAISELRYYAGLARTEAGRMIEPEPGSFSL-VLREPM 118

Query: 197 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEA-GLPPGVL 255
           GVAG IVPWN P++L    +APAL  G T+V+K A QT      + ++  E   LP GV+
Sbjct: 119 GVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQINAAIIRILAEIPSLPAGVV 178

Query: 256 NVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIF 315
           N+ +  G    A L +  DVD +SFTG   TG+ +   AA   LK + LELGGK+P I+F
Sbjct: 179 NLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAP-TLKRLGLELGGKTPCIVF 237

Query: 316 DDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG 375
           DDAD+D A+     AL    GQ C AGSR  V   + DE  ++  AR     VG      
Sbjct: 238 DDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLDPA 297

Query: 376 VEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG---NRGYFVQPTVFSD 425
            + GP ID     +V R +   I + A +   G  +     +G F++PT+   
Sbjct: 298 SDMGPLIDRANVDRVDRMVERAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEV 350

Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455

>gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins

 Score =  273 bits (701), Expect = 2e-87
 Identities = 142/355 (40%), Positives = 192/355 (54%), Gaps = 14/355 (3%)

Query: 77  VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136
           V++P   EVI  V   D  D + A+ATAR   +      + P+ER  I+ RAADL++K  
Sbjct: 3   VHNPYDGEVIGKVPADDRADAEEALATARAGAEN--RRALPPHERMAILERAADLLKKRA 60

Query: 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-----GNYHIQT 191
           EE A +     GKP   +   EV   +  L   A  A++I G  +P D      N    T
Sbjct: 61  EEFAKIIACEGGKPIKDARV-EVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWT 119

Query: 192 LHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLP 251
           + EP+GV   I P+NFPL L   K+APA+  G  +VLK A +TPL+AL +AK+  EAG+P
Sbjct: 120 IREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASKTPLSALELAKILVEAGVP 179

Query: 252 PGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSP 311
            GVL VV+G     G A A+   V  LSFTG    G   + L A +  K + LELGG +P
Sbjct: 180 EGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVG---EALRANAGGKRIALELGGNAP 236

Query: 312 FIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDP 371
            I+  DAD+D A+E      FY+ GQ C +  R YVHE +YDEF+E   A   +  VGDP
Sbjct: 237 VIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDP 296

Query: 372 FKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDV 426
                + GP I  E  ++V R++   +E+ A L CGG+R    G   +PTV  DV
Sbjct: 297 LDEDTDVGPLISEEAAERVERWVEEAVEAGARLLCGGER---DGALFKPTVLEDV 348

ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453

>gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp

 Score =  271 bits (696), Expect = 1e-86
 Identities = 135/359 (37%), Positives = 181/359 (50%), Gaps = 20/359 (5%)

Query: 78  YDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME 137
            +P T EV+  V   D  ++  AVA AR A     W  +    R++ +LR    +  + +
Sbjct: 1   RNPATGEVLGEVPVTDPAEVAAAVARARAAQRA--WAALGVEGRAQRLLRWKRALADHAD 58

Query: 138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKI-------HGLTVPGDGNYHIQ 190
           ELA L     GKP   +   EV + +  + + A  A ++        GL +P   N    
Sbjct: 59  ELAELLHAETGKPRADAG-LEVLLALEAIDWAARNAPRVLAPRKVPTGLLMP---NKKAT 114

Query: 191 TLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGL 250
             + P GV G I PWN+PLL     + PAL  GN +VLK +E TPL    +A+ +  AG 
Sbjct: 115 VEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPLVGELLAEAWAAAGP 174

Query: 251 PPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKS 310
           P GVL VV+G G T GAAL     VDK++FTG   TG+ V   AA+  L PV LELGGK 
Sbjct: 175 PQGVLQVVTGDGAT-GAALIDAG-VDKVAFTGSVATGRKVMAAAAE-RLIPVVLELGGKD 231

Query: 311 PFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK--AKARAMRRIV 368
           P I+  DAD+++A   A +    N GQ C +  R YVHE VYDEFV +  AKARA+R   
Sbjct: 232 PMIVLADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALR--P 289

Query: 369 GDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVT 427
           G       + GP     Q   V R++   +   A    GG R    G F +PTV +DV 
Sbjct: 290 GADDIGDADIGPMTTARQLDIVRRHVDDAVAKGAKALTGGARSNGGGPFYEPTVLTDVP 348

4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453

>gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed

 Score =  273 bits (701), Expect = 2e-86
 Identities = 143/371 (38%), Positives = 187/371 (50%), Gaps = 22/371 (5%)

Query: 67  VDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIML 126
           VD A+G T  V  P T E +A V    A D++ A A AR A  +  W      ER+ ++L
Sbjct: 26  VDGAAGPTREVTAPFTGEPLATVPVSTAADVEAAFARARAA--QRAWAATPVRERAAVLL 83

Query: 127 RAADLIEKNMEELAALETWNNGKP--YVQSLKSEVPMVVRLLHYYAGWADKI-----HGL 179
           R  DL+ +N EEL  L     GK   +      +V +  R   YYA  A K+        
Sbjct: 84  RFHDLVLENREELLDLVQLETGKARRHAFEEVLDVALTAR---YYARRAPKLLAPRRRAG 140

Query: 180 TVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239
            +P         L +P GV G I PWN+PL L      PAL  GN +VLK   QTPLTAL
Sbjct: 141 ALPVLT--KTTELRQPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTPLTAL 198

Query: 240 YVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299
              +L +EAGLP  +  VV+G GP  G AL  +   D L FTG   TG+++ E A    L
Sbjct: 199 AAVELLYEAGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATGRVLAEQAG-RRL 255

Query: 300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK- 358
              +LELGGK+P I+ DDAD+D+A   A  A F N GQ C +  R YVHE +YDEFV   
Sbjct: 256 IGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVRAF 315

Query: 359 -AKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRG-Y 416
            A  RAMR  +G  +    + G  I   Q + V  ++   +   AT+  GG    + G  
Sbjct: 316 VAAVRAMR--LGAGYDYSADMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGPL 373

Query: 417 FVQPTVFSDVT 427
           F +PTV + VT
Sbjct: 374 FYEPTVLTGVT 384

Length = 524

>gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like

 Score =  269 bits (691), Expect = 6e-86
 Identities = 138/348 (39%), Positives = 183/348 (52%), Gaps = 15/348 (4%)

Query: 84  EVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALE 143
            V+  V   DA D+DRA A A  A     W    P ER+ ++ RAADL+E++ +E+A   
Sbjct: 2   AVLGEVGVADAADVDRAAARAAAAQRA--WAATPPRERAAVLRRAADLLEEHADEIA--- 56

Query: 144 TWNNGKPYVQSLKS--EVPMVVRLLHYYAGWADKIHGLTVP-GDGNYHIQTLHEPIGVAG 200
            W   +      K+  EV   +  LH  AG   +  G  +P   G   +     P+GV G
Sbjct: 57  DWIVRESGSIRPKAGFEVGAAIGELHEAAGLPTQPQGEILPSAPGRLSLAR-RVPLGVVG 115

Query: 201 QIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYV-AKLFHEAGLPPGVLNVVS 259
            I P+NFPL+L    VAPAL  GN +VLK   +TP++   V A+LF EAGLP GVL+V+ 
Sbjct: 116 VISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVIARLFEEAGLPAGVLHVLP 175

Query: 260 GYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDAD 319
           G G  AG AL    +V  +SFTG    G+ V E A + +LK V+LELGGK+  I+ DDAD
Sbjct: 176 G-GADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGR-HLKKVSLELGGKNALIVLDDAD 233

Query: 320 VDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQG 379
           +D A     +  F +QGQ C A  R  VHE V D +  K  A+A    VGDP    V  G
Sbjct: 234 LDLAASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALG 293

Query: 380 PQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVT 427
           P I+  Q  +V   +   + + A LE GG      G F +PTV S V 
Sbjct: 294 PLINARQLDRVHAIVDDSVAAGARLEAGGTY---DGLFYRPTVLSGVK 338

NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443

>gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11

 Score =  266 bits (682), Expect = 3e-84
 Identities = 144/376 (38%), Positives = 198/376 (52%), Gaps = 17/376 (4%)

Query: 59  KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
           K LING++ ++ SGKT  VY P   EVI +V    A +I  A  TA  A   G WP M  
Sbjct: 3   KYLINGEWKES-SGKTIEVYSPIDGEVIGSVPALSALEILEAAETAYDAG-RGWWPTMPL 60

Query: 119 YERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG 178
            ER   + + ADL+++N EE+A L  W  GK    +LK EV   +  +        ++ G
Sbjct: 61  EERIDCLHKFADLLKENKEEVANLLMWEIGKTLKDALK-EVDRTIDYIRDTIEELKRLDG 119

Query: 179 LTVPGDGNYHIQTL-----HEPIGVAGQIVPWNFPL-LLFTWKVAPALTCGNTIVLKSAE 232
            ++PGD     +        EP+GV   I P+N+PL L  + K+ PAL  GNT+V K A 
Sbjct: 120 DSLPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVS-KLIPALIMGNTVVFKPAT 178

Query: 233 QTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE 292
           Q  L  + +A+ FH+AG P GV+NVV+G G   G  L +H  +D +SFTG  + G  +++
Sbjct: 179 QGVLLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLKK 238

Query: 293 LAAKSNLKPVTLELGGKSPFIIFDDADVDQAV-ELAHFALFYNQGQCCCAGSRTYVHERV 351
                  K + LELGGK P I+  DAD++ A  E+   AL Y+ GQ C A  R  VHE V
Sbjct: 239 QHPM---KRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYS-GQRCTAIKRVLVHESV 294

Query: 352 YDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRL 411
            DE VE  K    +  VG P+ +GV+  P IDP+    V   I   +   AT+  GG R 
Sbjct: 295 ADELVELLKEEVAKLKVGMPWDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGRE 354

Query: 412 GNRGYFVQPTVFSDVT 427
           G  G  + PT+   VT
Sbjct: 355 G--GNLIYPTLLDPVT 368

NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473

>gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like

 Score =  263 bits (674), Expect = 1e-83
 Identities = 129/338 (38%), Positives = 174/338 (51%), Gaps = 16/338 (4%)

Query: 96  DIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSL 155
           D D+AV  A  AF    W K  P ER  I+L+AADL+E   +E         G       
Sbjct: 1   DADQAVEAAAAAFPA--WSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGAT-AAWA 57

Query: 156 KSEVPMVVRLLHYYAGWADKIHGLTVPGD--GNYHIQTLHEPIGVAGQIVPWNFPLLLFT 213
              V +   +L   A    +I G ++P D  G   +  + EP+GV   I PWN P++L T
Sbjct: 58  GFNVDLAAGMLREAASLITQIIGGSIPSDKPGTLAM-VVKEPVGVVLGIAPWNAPVILGT 116

Query: 214 WKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGY---GPTAGAALA 270
             +A  L  GNT+VLK++E +P T   + ++FHEAGLP GVLNVV+      P    AL 
Sbjct: 117 RAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGVLNVVTHSPEDAPEVVEALI 176

Query: 271 SHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFA 330
           +H  V K++FTG    G+I+ E AAK +LKPV LELGGK+P I+ +DAD+D A   A F 
Sbjct: 177 AHPAVRKVNFTGSTRVGRIIAETAAK-HLKPVLLELGGKAPAIVLEDADLDAAANAALFG 235

Query: 331 LFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKV 390
            F N GQ C +  R  VHE + DEFVEK KA A  ++   P    V  G  +      +V
Sbjct: 236 AFLNSGQICMSTERIIVHESIADEFVEKLKAAA-EKLFAGP----VVLGSLVSAAAADRV 290

Query: 391 LRYIRSGIESNATLECGG-DRLGNRGYFVQPTVFSDVT 427
              +   +   A L  GG       G  + PT+  +VT
Sbjct: 291 KELVDDALSKGAKLVVGGLADESPSGTSMPPTILDNVT 328

Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432

>gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like

 Score =  261 bits (669), Expect = 9e-83
 Identities = 123/341 (36%), Positives = 171/341 (50%), Gaps = 25/341 (7%)

Query: 97  IDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLK 156
           I+ A+  A  AF    W K +  ER+ ++ + ADL+ +  +ELA L T   GKP  ++ +
Sbjct: 1   IEAALDRAHAAFLA--WRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEA-R 57

Query: 157 SEVPMVVRLLHYYAGWADKIHGL----TVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLL 211
           +EV     +  YYA   +          +  D G  +++  +EP+GV   I+PWNFP   
Sbjct: 58  AEVEKCAWICRYYA---ENAEAFLADEPIETDAGKAYVR--YEPLGVVLGIMPWNFPF-- 110

Query: 212 FTWKV----APALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVL-NVVSGYGPTAG 266
             W+V    AP L  GNT++LK A   P  AL + +LF EAG P GV  N++        
Sbjct: 111 --WQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVFQNLLIDSDQVE- 167

Query: 267 AALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVEL 326
            A+ +   V  ++ TG    G+ V   A K NLK   LELGG  PFI+ DDAD+D+AV+ 
Sbjct: 168 -AIIADPRVRGVTLTGSERAGRAVAAEAGK-NLKKSVLELGGSDPFIVLDDADLDKAVKT 225

Query: 327 AHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQ 386
           A      N GQ C A  R  VHE VYDEF+EK         VGDP     + GP    + 
Sbjct: 226 AVKGRLQNAGQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDL 285

Query: 387 FQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVT 427
             ++   +   + + ATL  GG R    G F  PTV +DVT
Sbjct: 286 RDELHEQVEEAVAAGATLLLGGKRPDGPGAFYPPTVLTDVT 326

Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429

>gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like

 Score =  256 bits (655), Expect = 2e-80
 Identities = 127/357 (35%), Positives = 174/357 (48%), Gaps = 18/357 (5%)

Query: 79  DPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEE 138
            P T E +  + +    D++ A A AR A     W      ER+ + LR  DL+ +  +E
Sbjct: 2   APFTGEPLGELPQSTPADVEAAFARARAAQRA--WAARPFAERAAVFLRFHDLVLERRDE 59

Query: 139 LAALETWNNGKPYVQSLKS--EVPMVVRLLHYYAGWADKI-----HGLTVPGDGNYHIQT 191
           L  L     GK    + +   +V +V R   YYA  A+++         +P         
Sbjct: 60  LLDLIQLETGKARRHAFEEVLDVAIVAR---YYARRAERLLKPRRRRGAIPVLT--RTTV 114

Query: 192 LHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLP 251
              P GV G I PWN+PL L      PAL  GN +VLK   QT LTAL+  +L  EAGLP
Sbjct: 115 NRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALTALWAVELLIEAGLP 174

Query: 252 PGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSP 311
             +  VV+G G   G A+  +   D + FTG   TG++V E A    L   +LELGGK+P
Sbjct: 175 RDLWQVVTGPGSEVGGAIVDN--ADYVMFTGSTATGRVVAERAG-RRLIGCSLELGGKNP 231

Query: 312 FIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDP 371
            I+ +DAD+D+A   A  A F N GQ C +  R YVHE VYDEFV +  AR     +G  
Sbjct: 232 MIVLEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAA 291

Query: 372 FKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRG-YFVQPTVFSDVT 427
              G + G  I   Q  +V  ++   +   AT+  GG    + G YF +PTV + VT
Sbjct: 292 LDYGPDMGSLISQAQLDRVTAHVDDAVAKGATVLAGGRARPDLGPYFYEPTVLTGVT 348

Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454

>gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional

 Score =  248 bits (636), Expect = 3e-78
 Identities = 112/306 (36%), Positives = 159/306 (51%), Gaps = 8/306 (2%)

Query: 129 ADLIEKNMEELAALETWNNGKPYVQSLKS-EVPMVVRLLHYYAGWADKIHGLTVPGD-GN 186
           A  I +   E++AL     GK  +Q L   EV      + Y A WA +  G  +  D   
Sbjct: 5   AAGIRERASEISALIVEEGGK--IQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDRPG 62

Query: 187 YHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFH 246
            +I      +GV   I+PWNFP  L   K+APAL  GNTIV+K +E TP  A+  AK+  
Sbjct: 63  ENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVD 122

Query: 247 EAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLEL 306
           E GLP GV N+V G G T G  LA +  V  +S TG    G+ +   AAK N+  V LEL
Sbjct: 123 EIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMAAAAK-NITKVCLEL 181

Query: 307 GGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRR 366
           GGK+P I+ DDAD+D AV+    +   N GQ C    R YV + +YD+FV +    AM+ 
Sbjct: 182 GGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGE-AMQA 240

Query: 367 I-VGDPFK-SGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFS 424
           +  G+P + + +  GP I+    ++V + +   +E  A +  GG  +  +GY+  PT+  
Sbjct: 241 VQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLL 300

Query: 425 DVTVSF 430
           DV    
Sbjct: 301 DVRQEM 306

Length = 409

>gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like

 Score =  245 bits (628), Expect = 2e-76
 Identities = 131/356 (36%), Positives = 179/356 (50%), Gaps = 19/356 (5%)

Query: 77  VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136
           V +P T EV+  V  G  E +  A+A A           +T Y+RS I+ +AA L+E   
Sbjct: 3   VRNPYTGEVVGTVPAGTEEALREALALAA-----SYRSTLTRYQRSAILNKAAALLEARR 57

Query: 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYH------IQ 190
           EE A L T  +G     +   EV     +L + A  A +  G +   D          I 
Sbjct: 58  EEFARLITLESGLCLKDTRY-EVGRAADVLRFAAAEALRDDGESFSCD-LTANGKARKIF 115

Query: 191 TLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGL 250
           TL EP+GV   I P+N PL     K+APA+   N IVLK +E+TPL+A+Y+A L +EAGL
Sbjct: 116 TLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLSAIYLADLLYEAGL 175

Query: 251 PPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKS 310
           PP +L+VV+G     G  L +H DVD ++FTG    GK +   AA +  K   LELGG  
Sbjct: 176 PPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAI---AATAGYKRQLLELGGND 232

Query: 311 PFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGD 370
           P I+ DDAD+++A  LA    + N GQ C A  R  VHE V DEFV+    ++   +VGD
Sbjct: 233 PLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGD 292

Query: 371 PFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDV 426
           P     + G  ID E   ++   +   I   A +  G  R   +G    PTV   V
Sbjct: 293 PMDPATDMGTVIDEEAAIQIENRVEEAIAQGARVLLGNQR---QGALYAPTVLDHV 345

Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451

>gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family

 Score =  241 bits (618), Expect = 1e-74
 Identities = 141/376 (37%), Positives = 191/376 (50%), Gaps = 13/376 (3%)

Query: 61  LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYE 120
           LI+G+ V  ++G TFP  +P T EV+   A+  A D+D A+A AR+AFDE  W + T   
Sbjct: 4   LIDGKLVAGSAG-TFPTVNPATEEVLGVAADATAADMDAAIAAARRAFDETDWSRDTAL- 61

Query: 121 RSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH--- 177
           R R + +  D +  ++EEL  L     G P + +  +++   V  L + A  A+      
Sbjct: 62  RVRCLRQLRDALRAHVEELRELTIAEVGAPRMLTAGAQLEGPVDDLGFAADLAESYAWTT 121

Query: 178 --GLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTP 235
             G+  P           E +GV G I PWNFP  +   K+ PAL  GNT+VLK A  TP
Sbjct: 122 DLGVASPMGIPTRRTLRREAVGVVGAITPWNFPHQINLAKLGPALAAGNTVVLKPAPDTP 181

Query: 236 LTALYVAKLFHE-AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA 294
             A  + +L  E    PPGV+N+V+      GA LA    VD +SFTG   TG+ V   A
Sbjct: 182 WCAAVLGELIAEHTDFPPGVVNIVTSSDHRLGALLAKDPRVDMVSFTGSTATGRAVMADA 241

Query: 295 AKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDE 354
           A + LK V LELGGKS FI+ DDAD+  A  +A F +  + GQ C   +R  V    YDE
Sbjct: 242 AAT-LKKVFLELGGKSAFIVLDDADLAAACSMAAFTVCMHAGQGCAITTRLVVPRARYDE 300

Query: 355 FVEKAKARAMRRI-VGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGN 413
            V  A A  M  I  GDP   G   GP I   Q  +V  Y+   +       CGG R  +
Sbjct: 301 AVAAA-AATMGSIKPGDPADPGTVCGPVISARQRDRVQSYLDLAVAEGGRFACGGGRPAD 359

Query: 414 R--GYFVQPTVFSDVT 427
           R  G+FV+PTV + + 
Sbjct: 360 RDRGFFVEPTVIAGLD 375

This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480

>gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp

 Score =  240 bits (614), Expect = 2e-74
 Identities = 122/355 (34%), Positives = 162/355 (45%), Gaps = 11/355 (3%)

Query: 78  YDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME 137
             P    VIA       E +  A+  AR A     W  +   ER  I+ RA +L+  N +
Sbjct: 1   ISPIDGSVIAERPLASLEAVRAALERARAAQKG--WRAVPLEERKAIVTRAVELLAANTD 58

Query: 138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADK-IHGLTVPGDGNYHIQTLHEPI 196
           E+A   TW  G+P  Q+   E+  ++    Y    A++ +  + VP    +      EP+
Sbjct: 59  EIAEELTWQMGRPIAQA-GGEIRGMLERARYMISIAEEALADIRVPEKDGFERYIRREPL 117

Query: 197 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLN 256
           GV   I PWN+P L     V PAL  GN ++LK + QTPL     A  F EAGLP GV  
Sbjct: 118 GVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGERFAAAFAEAGLPEGVFQ 177

Query: 257 VVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFD 316
           V+     T  AAL +   +D +SFTG    G+ +Q  AA      V LELGGK P  +  
Sbjct: 178 VLHLSHET-SAALIADPRIDHVSFTGSVAGGRAIQRAAAG-RFIKVGLELGGKDPAYVRP 235

Query: 317 DADVDQAVE-LAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG 375
           DAD+D A E L   A F+N GQ CC+  R YVHE +YD FVE   A      +GDP    
Sbjct: 236 DADLDAAAESLVDGA-FFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPS 294

Query: 376 VEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNR---GYFVQPTVFSDVT 427
              GP +       V   I   I   A     G         G ++ PTV ++V 
Sbjct: 295 TTLGPVVSARAADFVRAQIADAIAKGARALIDGALFPEDKAGGAYLAPTVLTNVD 349

PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452

>gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative

 Score =  242 bits (618), Expect = 2e-74
 Identities = 129/375 (34%), Positives = 191/375 (50%), Gaps = 17/375 (4%)

Query: 61  LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYE 120
           +ING+ V+    K   +     +EV+  V++   E  + A+  A KAF+   W K  P E
Sbjct: 36  VINGERVETE-NKIVSINPCDKSEVVGTVSKASQEHAEHALQAAAKAFEA--WKKTDPEE 92

Query: 121 RSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG-- 178
           R+ I+ +AA ++ +   E +AL     GKP+ ++  +EV   +  + YYA    ++    
Sbjct: 93  RAAILFKAAAIVRRRRHEFSALLVKEVGKPWNEA-DAEVAEAIDFMEYYARQMIELAKGK 151

Query: 179 --LTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
              +  G+ N   Q ++ P GV   I PWNFP  +        +  GN +VLK AE  P+
Sbjct: 152 PVNSREGETN---QYVYTPTGVTVVISPWNFPFAIMVGMTVAPIVTGNCVVLKPAEAAPV 208

Query: 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
            A    ++  EAGLP GV+  V G G   G  L  H     ++FTG  + G  + E AAK
Sbjct: 209 IAAKFVEILEEAGLPKGVVQFVPGSGSEVGDYLVDHPKTSLITFTGSREVGTRIFERAAK 268

Query: 297 -----SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERV 351
                 +LK V  E+GGK   I+ +DAD++ A + A  + F   GQ C AGSR  VHE+V
Sbjct: 269 VQPGQKHLKRVIAEMGGKDTVIVDEDADIELAAQSAFTSAFGFAGQKCSAGSRAVVHEKV 328

Query: 352 YDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRL 411
           YDE VE+         VG P  + V  GP ID + F K++ YI  G ++   L  GG   
Sbjct: 329 YDEVVERFVEITESLKVGPPDSADVYVGPVIDQKSFNKIMEYIEIG-KAEGRLVSGGCGD 387

Query: 412 GNRGYFVQPTVFSDV 426
            ++GYF+ PT+F+DV
Sbjct: 388 DSKGYFIGPTIFADV 402

This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511

>gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like

 Score =  236 bits (605), Expect = 4e-73
 Identities = 123/359 (34%), Positives = 172/359 (47%), Gaps = 17/359 (4%)

Query: 75  FPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK 134
             V +P T EV+A VA    +DI+ A+A A KAF   P   +  + R+ I+L     +E+
Sbjct: 1   LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFR--PMRALPAHRRAAILLHCVARLEE 58

Query: 135 NMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGN-----YHI 189
             EELA       GKP   + + EV   +      A  A +I+G  +P D +        
Sbjct: 59  RFEELAETIVLEAGKPIKDA-RGEVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQG 117

Query: 190 QTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAG 249
                PIG    I P+NFPL L   KVAPA+  G   VLK A +TPL+AL + ++  E G
Sbjct: 118 LVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPASRTPLSALILGEVLAETG 177

Query: 250 LPPGVLNVVSGYGPTAGAA-LASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGG 308
           LP G  +V+        A  L +   +  LSFTG    G  ++  A K   K V LELGG
Sbjct: 178 LPKGAFSVLPC--SRDDADLLVTDERIKLLSFTGSPAVGWDLKARAGK---KKVVLELGG 232

Query: 309 KSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIV 368
            +  I+  DAD+D A +   F  FY  GQ C +  R  VH  VYDEF  +  AR      
Sbjct: 233 NAAVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKT 292

Query: 369 GDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVT 427
           GDP     + GP I   + ++V  ++   +++ A L  GG R G     ++PT+  DV 
Sbjct: 293 GDPKDDATDVGPMISESEAERVEGWVNEAVDAGAKLLTGGKRDGA---LLEPTILEDVP 348

Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452

>gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B

 Score =  230 bits (589), Expect = 2e-70
 Identities = 116/360 (32%), Positives = 168/360 (46%), Gaps = 14/360 (3%)

Query: 70  ASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAA 129
             G       P   E IA V +   ED +  +  A++AF E  W  +   +R  I+ +  
Sbjct: 9   GGGGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFKE--WRDVPAPKRGEIVRQIG 66

Query: 130 DLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYH- 188
           D + K  E L  L +   GK   + L  EV  ++ +  +  G + +++GLT+P +   H 
Sbjct: 67  DALRKKKEALGKLVSLEMGKILPEGL-GEVQEMIDICDFAVGLSRQLYGLTIPSERPGHR 125

Query: 189 -IQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHE 247
            ++  + P+GV G I  +NFP+ ++ W  A AL CGN +V K +  TPLTA+ V K+   
Sbjct: 126 MMEQWN-PLGVVGVITAFNFPVAVWGWNAAIALVCGNVVVWKPSPTTPLTAIAVTKIVAR 184

Query: 248 A----GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVT 303
                GLP  + ++V G G   G AL     V  +SFTG    G+ V +  A        
Sbjct: 185 VLEKNGLPGAIASLVCG-GADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVAA-RFGRSL 242

Query: 304 LELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK-AKAR 362
           LELGG +  I+ +DAD+D AV    FA     GQ C    R  VHE +YDE +E+  KA 
Sbjct: 243 LELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKKAY 302

Query: 363 AMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTV 422
              RI GDP   G   GP          L  I        T+  GG  +   G +V+PT+
Sbjct: 303 KQVRI-GDPLDDGTLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEPTI 361

Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474

>gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like

 Score =  216 bits (551), Expect = 8e-65
 Identities = 129/377 (34%), Positives = 195/377 (51%), Gaps = 19/377 (5%)

Query: 61  LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYE 120
           L+ G        +   V     +EV+   A+ D  + + A+  A  AF    W K  P E
Sbjct: 21  LVIGGEWVDTKERMVSVSPFAPSEVVGTTAKADKAEAEAALEAAWAAFKT--W-KDWPQE 77

Query: 121 -RSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG- 178
            R+R++L+AADL+ +   EL A  T+  GK +V+++  +V   +  + YYA  A ++   
Sbjct: 78  DRARLLLKAADLLRRRRRELIATLTYEVGKNWVEAI-DDVAEAIDFIRYYARAALRLRYP 136

Query: 179 ----LTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQT 234
               +  PG+ N   ++ +  +G    I PWNFP+ +FT  +   +  GNT++ K AE  
Sbjct: 137 AVEVVPYPGEDN---ESFYVGLGAGVVISPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDA 193

Query: 235 PLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA 294
            +    V ++FHEAG PPGV+  + G G   GA L  H  +  ++FTG  +TGK + E A
Sbjct: 194 VVVGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEAA 253

Query: 295 AK-----SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHE 349
           A+     +  K + +E GGK+  I+ + AD +  VE    + F  QGQ C A SR  + +
Sbjct: 254 ARLAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQ 313

Query: 350 RVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGD 409
             Y+  +E+   RA R  VG P ++G + GP ID EQ  KVL YI  G ++   L  GG 
Sbjct: 314 GAYEPVLERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHG-KNEGQLVLGGK 372

Query: 410 RLGNRGYFVQPTVFSDV 426
           RL   GYFV PTV  +V
Sbjct: 373 RLEGEGYFVAPTVVEEV 389

ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500

>gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA

 Score =  212 bits (543), Expect = 2e-63
 Identities = 132/376 (35%), Positives = 183/376 (48%), Gaps = 12/376 (3%)

Query: 61  LINGQFVDAASGKTFPVYDP-RTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPY 119
           +ING+  +  +G+  PV DP      I  V+  DAED+D A+A A  AF    W      
Sbjct: 36  IINGE--ETETGEGAPVIDPADHERTIGEVSLADAEDVDAALAIAAAAFAG--WSATPVE 91

Query: 120 ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL 179
           ER+ I+ +AADL+E N  EL AL     GK    +  +EV   +    YYA  A ++   
Sbjct: 92  ERAEILEKAADLLEANRGELIALAAAEAGKTLADAD-AEVREAIDFCRYYAAQARELFSD 150

Query: 180 TVPGDGNYHIQTLH-EPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 238
                    +  L     GV   I PWNFPL +FT ++A AL  GNT++ K AEQTPL A
Sbjct: 151 PELPGPTGELNGLELHGRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIA 210

Query: 239 LYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGK-IVQELAAKS 297
               +L HEAG+P  VL +V G G   G AL +H  +D + FTG  +T K I + LA + 
Sbjct: 211 ARAVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAERD 270

Query: 298 N-LKPVTLELGGKSPFIIFDDADVDQAV-ELAHFALFYNQGQCCCAGSRTYVHERVYDEF 355
             + P+  E GGK+  I+   A  +QAV ++   A F + GQ C A    Y+ E + + F
Sbjct: 271 GPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSA-FGSAGQRCSALRLLYLQEEIAERF 329

Query: 356 VEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRG 415
           +E  K       VGDP+    + GP ID     K+LR     +   A L          G
Sbjct: 330 IEMLKGAMASLKVGDPWDLSTDVGPLIDKPA-GKLLRAHTELMRGEAWLIAPAPLDDGNG 388

Query: 416 YFVQPTVFSDVTVSFI 431
           YFV P +   V +  +
Sbjct: 389 YFVAPGIIEIVGIFDL 404

The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518

>gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed

 Score =  210 bits (536), Expect = 6e-63
 Identities = 125/359 (34%), Positives = 174/359 (48%), Gaps = 22/359 (6%)

Query: 79  DPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEE 138
           +P T E +        +++D A+A A   F +  +   T  +R+R    AADL+E   ++
Sbjct: 7   NPATGETVKTFTALTDDEVDAAIARAHARFRD--YRTTTFAQRARWANAAADLLEAEADQ 64

Query: 139 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD----GNYHIQTLHE 194
           +AAL T   GK    + K+E     +   YYA  A+ +     P D    G       ++
Sbjct: 65  VAALMTLEMGKTLASA-KAEALKCAKGFRYYAEHAEALLA-DEPADAAAVGASRAYVRYQ 122

Query: 195 PIGVAGQIVPWNFPLLLFTWKV----APALTCGNTIVLKSAEQTPLTALYVAKLFHEAGL 250
           P+GV   ++PWNFPL    W+V    APAL  GN  +LK A   P TALY+A LF  AG 
Sbjct: 123 PLGVVLAVMPWNFPL----WQVVRFAAPALMAGNVGLLKHASNVPQTALYLADLFRRAGF 178

Query: 251 PPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKS 310
           P G    +   G  A  A+     V   + TG    G+ V  +A    +K   LELGG  
Sbjct: 179 PDGCFQTLL-VGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGDE-IKKTVLELGGSD 236

Query: 311 PFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK--AKARAMRRIV 368
           PFI+   AD+D+A E A  A   N GQ C A  R  VH  VYD F EK  A+  A+R  V
Sbjct: 237 PFIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALR--V 294

Query: 369 GDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVT 427
           GDP     + GP    +   +V + +   + + AT+ CGG R    G+F  PTV +D+T
Sbjct: 295 GDPTDPDTDVGPLATEQGRDEVEKQVDDAVAAGATILCGGKRPDGPGWFYPPTVITDIT 353

Length = 457

>gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like

 Score =  207 bits (529), Expect = 8e-62
 Identities = 117/372 (31%), Positives = 172/372 (46%), Gaps = 36/372 (9%)

Query: 78  YDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME 137
           YDP T + + +V     ED+D A+A AR A  E  W K +  ER +++      I +N E
Sbjct: 1   YDPATGQHLGSVPADTPEDVDEAIAAARAAQRE--WAKTSFAERRKVLRSLLKYILENQE 58

Query: 138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL-----------TVPGDGN 186
           E+  +   + GK  V +   E+ +V           +KI              + PG   
Sbjct: 59  EICRVACRDTGKTMVDASLGEI-LVT---------CEKIRWTLKHGEKALRPESRPGGLL 108

Query: 187 --YHIQTLH-EPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAK 243
             Y    +  EP+GV G IV WN+P       +  AL  GN IV+K +EQ   ++ +   
Sbjct: 109 MFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVAWSSGFFLS 168

Query: 244 LFHEA----GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299
           +  E     G  P ++ +V+    T   AL SH  +D ++F G    GK V   AA+S L
Sbjct: 169 IIRECLAACGHDPDLVQLVTCLPET-AEALTSHPVIDHITFIGSPPVGKKVMAAAAES-L 226

Query: 300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 359
            PV LELGGK P I+ DDAD+DQ   +     F + GQ C    R  VHE++YD+ +E  
Sbjct: 227 TPVVLELGGKDPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEIL 286

Query: 360 KARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGN----RG 415
             R      G P    V+ G  I P +F ++   +   +E  A L  GG R  +    +G
Sbjct: 287 TDRVQALRQGPPLDGDVDVGAMISPARFDRLEELVADAVEKGARLLAGGKRYPHPEYPQG 346

Query: 416 YFVQPTVFSDVT 427
           ++  PT+  DVT
Sbjct: 347 HYFPPTLLVDVT 358

Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465

>gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase

 Score =  203 bits (519), Expect = 3e-60
 Identities = 127/372 (34%), Positives = 176/372 (47%), Gaps = 20/372 (5%)

Query: 62  INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYER 121
           I G+ V     +   V  P    V+  V +   +D+ RA A A  A+     P +T YER
Sbjct: 8   IAGEKVS--RDRVIEVRYPYNGTVVGTVPKASVDDVRRAFAIAA-AYR----PTLTRYER 60

Query: 122 SRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTV 181
           S I+ RAA L+    EE++ L T  +G     SL  EV  V  +L + A  A +  G   
Sbjct: 61  SAILDRAAALLAARKEEISDLITLESGLSKKDSL-YEVGRVADVLTFAAAEALRDDGQIF 119

Query: 182 PGDGNYH-----IQTLHEPI-GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTP 235
             D   H     + T  EP+ GV   I P+N P+     K+APA+   N +V+K +E+TP
Sbjct: 120 SCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEKTP 179

Query: 236 LTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA 295
           L+ALY+A + +EAGLPP +L VV+G        L ++  VD ++FTG    GK +   AA
Sbjct: 180 LSALYLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYI---AA 236

Query: 296 KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEF 355
           ++  +   LELGG  P I+ +DAD+D+A +LA    + N GQ C A  R  V E V D F
Sbjct: 237 RAGYRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRF 296

Query: 356 VEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRG 415
            E    +      GDP    V+ G  ID          +   I   A L  G  R    G
Sbjct: 297 TELLVEKTRAWRYGDPMDPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVR---DG 353

Query: 416 YFVQPTVFSDVT 427
               PTV   V 
Sbjct: 354 ALYAPTVLDRVD 365

This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472

>gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase

 Score =  197 bits (503), Expect = 6e-58
 Identities = 118/373 (31%), Positives = 181/373 (48%), Gaps = 11/373 (2%)

Query: 59  KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
            + I G+F + ASG   PV +P T EV   VA    +++D AVA+AR+ F    W + + 
Sbjct: 2   NHWIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETF--LTWGQTSL 59

Query: 119 YERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG 178
            +R+ ++LR   L++++ +E+A L T  +GK +  +   +V   + ++ +  G    + G
Sbjct: 60  AQRTSVLLRYQALLKEHRDEIAELITAEHGKTHSDA-LGDVARGLEVVEHACGVNSLLKG 118

Query: 179 LTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLT 237
            T         + ++ +P+GV   I P+NFP ++  W    A+ CGNT VLK +E+ P  
Sbjct: 119 ETSTQVATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPIAIACGNTFVLKPSEKVPSA 178

Query: 238 ALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKS 297
           A+ +A+LF EAG P GVLNVV G    A   L  H DV  +SF G    G+ +    +  
Sbjct: 179 AVKLAELFSEAGAPDGVLNVVHG-DKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSAH 237

Query: 298 NLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVE 357
             K V    G K+  ++  DAD D A +    A +   GQ C A S   V     DE+V 
Sbjct: 238 G-KRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAIS-AAVLVGAADEWVP 295

Query: 358 KAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGY- 416
           + + RA +  +G     G E GP I P+   +V   I  G    A +   G      GY 
Sbjct: 296 EIRERAEKIRIGPGDDPGAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYE 355

Query: 417 ---FVQPTVFSDV 426
              +V PT+   V
Sbjct: 356 EGNWVGPTLLERV 368

Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477

>gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]

 Score =  200 bits (510), Expect = 8e-57
 Identities = 124/370 (33%), Positives = 178/370 (48%), Gaps = 26/370 (7%)

Query: 61  LINGQFVDAASGKTFPVYDP-RTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPY 119
           ++NG  V    G+  PV +P    +++  V E    D+++A+  A  A     W    P 
Sbjct: 117 IVNGAPVAG--GEPRPVINPADPDDIVGTVTEATEADVEQALEAAVAAAPI--WSATPPA 172

Query: 120 ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL 179
           ER+ I+ RAADL+E  M +L  L     GK    ++ +EV   V  L YYAG A      
Sbjct: 173 ERAAILERAADLMEAQMPQLMGLLVREAGKTLSNAI-AEVREAVDFLRYYAGQARD---- 227

Query: 180 TVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239
           T            H P+G    I PWNFPL +FT ++A AL  GN+++ K AEQTPL A 
Sbjct: 228 TFGNLT-------HRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAA 280

Query: 240 YVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299
              +L HEAG+PPGVL ++ G G T GAAL +   V  + FTG  +  +++Q   AK   
Sbjct: 281 QAVRLLHEAGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQG 340

Query: 300 KPVTL--ELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVE 357
           +P+ L  E GG++  I+   A  +Q V     + F + GQ C A     + E V D  + 
Sbjct: 341 RPIPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQEDVADRILT 400

Query: 358 KAKARAMRRI-VGDPFKSGVEQGPQIDPEQFQKVLRYI---RSGIESNATLECGGDRLGN 413
             K  AM  + VG+P +   + GP ID E    + ++I   RS                 
Sbjct: 401 MLKG-AMAELRVGNPDRLTTDVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSL--Q 457

Query: 414 RGYFVQPTVF 423
           +G FV PT+ 
Sbjct: 458 KGTFVAPTLI 467

Length = 769

>gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

 Score =  196 bits (501), Expect = 7e-55
 Identities = 136/373 (36%), Positives = 185/373 (49%), Gaps = 29/373 (7%)

Query: 67  VDAASGKTFPVYDP-RTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIM 125
           +    G+  PV  P     V+  VA  DAE +++A+A AR AF    W +    ER+ I+
Sbjct: 556 IINGEGEARPVVSPADRRRVVGEVAFADAEQVEQALAAARAAFPA--WSRTPVEERAAIL 613

Query: 126 LRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG--LTVPG 183
            RAADL+E N  EL AL     GK    ++ +EV   V    YYA  A ++ G    +PG
Sbjct: 614 ERAADLLEANRAELIALCVREAGKTLQDAI-AEVREAVDFCRYYAAQARRLFGAPEKLPG 672

Query: 184 -DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVA 242
             G  +   LH   GV   I PWNFPL +F  +VA AL  GNT++ K AEQTPL A    
Sbjct: 673 PTGESNELRLH-GRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAAEAV 731

Query: 243 KLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIV-QELAAKSNLKP 301
           KL HEAG+P  VL ++ G G T GAAL +   +  ++FTG  +T +I+ + LAA+     
Sbjct: 732 KLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTLAARDG-PI 790

Query: 302 VTL--ELGGKSPFIIFDDAD------VDQAVELAHFALFYNQGQCCCAGSRTYVHERVYD 353
           V L  E GG++  I+  D+       VD  V  A    F + GQ C A    +V E + D
Sbjct: 791 VPLIAETGGQNAMIV--DSTALPEQVVDDVVTSA----FRSAGQRCSALRVLFVQEDIAD 844

Query: 354 EFVEKAKARAMRRI-VGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGD--R 410
             +E  K  AM  + VGDP     + GP ID E    +  +I   ++  A L        
Sbjct: 845 RVIEMLKG-AMAELKVGDPRLLSTDVGPVIDAEAKANLDAHIER-MKREARLLAQLPLPA 902

Query: 411 LGNRGYFVQPTVF 423
               G+FV PT F
Sbjct: 903 GTENGHFVAPTAF 915

Length = 1038

>gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain)

 Score =  187 bits (476), Expect = 7e-54
 Identities = 112/371 (30%), Positives = 165/371 (44%), Gaps = 26/371 (7%)

Query: 61  LINGQFVDAASGKTFPV---YDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
           +I   +      +  PV    D R  +++  V   +   +  A+ +A++AF    W    
Sbjct: 41  IIGHSYKADGEAQ--PVTNPADRR--DIVGQVFHANLAHVQAAIDSAQQAFPT--WNATP 94

Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
             ER+  + R ADL+E +M EL AL     GK    ++ +EV   V    YYA     + 
Sbjct: 95  AKERAAKLDRLADLLELHMPELMALCVREAGKTIHNAI-AEVREAVDFCRYYAKQVRDVL 153

Query: 178 GLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLT 237
           G           +   E  GV   I PWNFPL +FT +++ AL  GNT++ K AEQT L 
Sbjct: 154 G-----------EFSVESRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLI 202

Query: 238 ALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKS 297
           A    +L  EAG P G + ++ G G   GAAL S   +  ++FTG  +  +++ +  A+ 
Sbjct: 203 AYRAVELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQR 262

Query: 298 NLKPVTL--ELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEF 355
              PV L  E GG++  I+   A  +Q V     + F + GQ C A     V E V D  
Sbjct: 263 EDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRV 322

Query: 356 VEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYI---RSGIESNATLECGGDRLG 412
           +   +       VG P     + GP ID E  Q +L +I       +  A L     R  
Sbjct: 323 LTMIQGAMQELKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRAC 382

Query: 413 NRGYFVQPTVF 423
             G FV PT+F
Sbjct: 383 QHGTFVAPTLF 393

This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500

>gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

 Score =  190 bits (484), Expect = 2e-52
 Identities = 137/420 (32%), Positives = 200/420 (47%), Gaps = 38/420 (9%)

Query: 18  ASPSLLRSLGRESSRARGISRFSTAAVVEEPIIPPVQISYT-KNLINGQFVDAASGKTFP 76
             P  L    R +S+   +S  +T A ++E +      ++    L+ G       G T P
Sbjct: 514 PLPRDLYGPERRNSKGLDLSDEATLAALDEALNAFAAKTWHAAPLLAG---GDVDGGTRP 570

Query: 77  VYDP-RTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKN 135
           V +P    +V+  V E  AED++RA+A A+ AF E  W      ER+ I+ RAADL+E +
Sbjct: 571 VLNPADHDDVVGTVTEASAEDVERALAAAQAAFPE--WSATPAAERAAILERAADLMEAH 628

Query: 136 MEELAAL------ETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHI 189
           M EL AL      +T  N         +EV   V  L YYA  A +     + G G    
Sbjct: 629 MPELFALAVREAGKTLANAI-------AEVREAVDFLRYYAAQARR----LLNGPG---- 673

Query: 190 QTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAG 249
              H+P+G    I PWNFPL +FT ++A AL  GNT++ K AEQTPL A    +L HEAG
Sbjct: 674 ---HKPLGPVVCISPWNFPLAIFTGQIAAALVAGNTVLAKPAEQTPLIAARAVRLLHEAG 730

Query: 250 LPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTL--ELG 307
           +P   L ++ G G T GAAL +   +  + FTG  +  +++Q   AK +  PV L  E G
Sbjct: 731 VPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSGPPVPLIAETG 790

Query: 308 GKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMR-R 366
           G++  I+   A  +Q V     + F + GQ C A     + E V D  +   K  AM   
Sbjct: 791 GQNAMIVDSSALPEQVVADVIASAFDSAGQRCSALRVLCLQEDVADRVLTMLKG-AMDEL 849

Query: 367 IVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATL--ECGGDRLGNRGYFVQPTVFS 424
            +GDP++   + GP ID E    +  +I   + +   L  +        +G FV PT+  
Sbjct: 850 RIGDPWRLSTDVGPVIDAEAQANIEAHI-EAMRAAGRLVHQLPLPAETEKGTFVAPTLIE 908

Length = 1208

>gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like

 Score =  181 bits (462), Expect = 2e-52
 Identities = 114/339 (33%), Positives = 162/339 (47%), Gaps = 18/339 (5%)

Query: 96  DIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPY---- 151
            +D AVA AR AF    W  ++  ER+ I+ R A+L++ N EELA L +   GKP     
Sbjct: 1   QVDAAVAAARAAFPG--WAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQ 58

Query: 152 --VQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPL 209
             V ++  ++ + ++  H   G        T    G   ++  H P GV     P+NFP 
Sbjct: 59  TEVAAMAGKIDISIKAYHERTGERA-----TPMAQGRAVLR--HRPHGVMAVFGPFNFPG 111

Query: 210 LLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAAL 269
            L    + PAL  GNT+V K +E TP  A  + +L+ EAGLPPGVLN+V G G   G AL
Sbjct: 112 HLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVLNLVQG-GRETGEAL 170

Query: 270 ASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHF 329
           A+H  +D L FTG   TG ++    A    K + LE+GG +P +++D AD+D A  L   
Sbjct: 171 AAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQ 230

Query: 330 ALFYNQGQCCCAGSRTYVHE-RVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQ 388
           + F   GQ C    R  V +  V D F+E+    A R  +G P       GP I      
Sbjct: 231 SAFLTAGQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAA 290

Query: 389 KVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVT 427
           + L   +  +          +RL     F+ P +  DVT
Sbjct: 291 RYLLAQQDLLALGGEPLLAMERLVAGTAFLSPGII-DVT 328

N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431

>gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

 Score =  177 bits (451), Expect = 1e-50
 Identities = 122/360 (33%), Positives = 167/360 (46%), Gaps = 24/360 (6%)

Query: 77  VYDPRTAEVIANVAEGDAEDIDRAVATARKAF-DEGPWPKMTPYERSRIMLRAADLIEKN 135
           V +P   + I  V   D   ID+A+ TA   F D   W  +  +ER  I+ R ADL+E+ 
Sbjct: 3   VVNPFDLKPIGEVPTVDWAAIDKALDTAHALFLDRNNW--LPAHERIAILERLADLMEER 60

Query: 136 MEELAALETWNNGKPYVQSLKSE-------VPMVVRLLHYYAGWADKIHGLTVPGDGNYH 188
            +ELA L     GKP V + K E       V +    L    G  +   GLT    G   
Sbjct: 61  ADELALLIAREGGKPLVDA-KVEVTRAIDGVELAADELGQLGG-REIPMGLTPASAGRIA 118

Query: 189 IQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEA 248
             T  EPIGV   I  +N PL L   +VAPA+  G  +++K A  TPL+ L    L HEA
Sbjct: 119 F-TTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATPLSCLAFVDLLHEA 177

Query: 249 GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVT---LE 305
           GLP G    V      A   L +   V   SF G   + ++   L  +S L P T   LE
Sbjct: 178 GLPEGWCQAVPCENAVA-EKLVTDPRVAFFSFIG---SARVGWML--RSKLAPGTRCALE 231

Query: 306 LGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMR 365
            GG +P I+   AD+D  +       FY+ GQ C +  R +V   + D+F ++  A A +
Sbjct: 232 HGGAAPVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEK 291

Query: 366 RIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSD 425
            +VGDP     E GP I P +  +V  ++   + + A L CGG RL +  Y   PTV  D
Sbjct: 292 LVVGDPTDPDTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGKRLSDTTY--APTVLLD 349

Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455

>gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed

 Score =  177 bits (452), Expect = 2e-50
 Identities = 120/344 (34%), Positives = 175/344 (50%), Gaps = 31/344 (9%)

Query: 62  INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYER 121
           ING ++ A  G+ F   +P + EV+    +  A  +D AV  AR AF    W +++  ER
Sbjct: 5   INGDWI-AGQGEAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFPA--WARLSFEER 61

Query: 122 SRIMLRAADLIEKNMEELA---ALETWNNGKPY------VQSLKSEVPMVVRLLHYYAGW 172
             I+ R A L+E+N EELA   A ET   GKP       V ++ +++ + ++  H   G 
Sbjct: 62  QAIVERFAALLEENKEELAEVIARET---GKPLWEAATEVTAMINKIAISIQAYHERTG- 117

Query: 173 ADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAE 232
            +K   +    DG   ++  H P GV     P+NFP  L    + PAL  GNT+V K +E
Sbjct: 118 -EKRSEM---ADGAAVLR--HRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSE 171

Query: 233 QTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIV-Q 291
            TP  A    KL+ +AGLP GVLN+V G G   G ALA+H D+D L FTG  +TG ++ +
Sbjct: 172 LTPWVAELTVKLWQQAGLPAGVLNLVQG-GRETGKALAAHPDIDGLLFTGSANTGYLLHR 230

Query: 292 ELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERV 351
           + A +   K + LE+GG +P +I + AD+D AV L   + F + GQ C    R  V +  
Sbjct: 231 QFAGQPE-KILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGA 289

Query: 352 Y-DEFVEKAKARAMRRIVGDPFKSGVEQ---GPQIDPEQFQKVL 391
             D F+ +  A A R  VG        Q   G  I  +  Q ++
Sbjct: 290 QGDAFLARLVAVAKRLTVGRWDAE--PQPFMGAVISEQAAQGLV 331

Length = 487

>gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase

 Score =  163 bits (415), Expect = 3e-45
 Identities = 116/331 (35%), Positives = 162/331 (48%), Gaps = 30/331 (9%)

Query: 62  INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYER 121
           I+G++  A  G++F   +P T EV+   A   A  ++ AVA AR AF    W +++  ER
Sbjct: 3   IDGKWR-AGQGESFSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFPA--WARLSLEER 59

Query: 122 SRIMLRAADLIEKNMEELA---ALETWNNGKPY------VQSLKSEVPMVVRLLHYYAGW 172
             ++ R A L+E+  E LA   A ET   GKP       V S+  +V + ++  H   G 
Sbjct: 60  IAVVQRFAALLEERKEALARVIARET---GKPLWETRTEVASMIGKVAISIKAYHERTG- 115

Query: 173 ADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAE 232
                      DG   ++  H P GV     P+NFP  L    + PAL  GNT+V K +E
Sbjct: 116 ----ESENPMPDGRAVLR--HRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSE 169

Query: 233 QTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE 292
            TP  A    KL+ +AGLP GVLN+V G     G ALA+H D+D L FTG  +TG ++  
Sbjct: 170 LTPWVAEETVKLWEKAGLPAGVLNLVQG-ARETGVALAAHPDIDGLLFTGSSNTGHLLHR 228

Query: 293 LAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVY 352
             A    K + LE+GG +P I+ + AD+D AV L   + F + GQ C    R  V +   
Sbjct: 229 QFAGRPEKILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQ 288

Query: 353 -DEFVEKAKARAMRRIVGD------PFKSGV 376
            D F+ +    A R  VG       PF   V
Sbjct: 289 GDAFLARLVEVAERLTVGAWDAEPQPFMGAV 319

Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484

>gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins

 Score =  158 bits (402), Expect = 9e-44
 Identities = 108/335 (32%), Positives = 158/335 (47%), Gaps = 23/335 (6%)

Query: 100 AVATARKAFDEGPWPKMTPYE-RSRIMLRAADLIEKNMEEL-AALETWNNGKPYVQSLKS 157
            VA  R+ F  G   K    E R   +     ++ +N EE+ AAL   + GKP  ++  +
Sbjct: 3   LVARLRETFLTG---KTRSLEWRKAQLKALKRMLTENEEEIAAALYA-DLGKPPAEAYLT 58

Query: 158 EVPMVVRLLHYY----AGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFT 213
           E+ +V+  + +       W                   + EP+GV   I PWN+PL L  
Sbjct: 59  EIAVVLGEIDHALKHLKKWMKPRRVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLAL 118

Query: 214 WKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHM 273
             +  A+  GNT+VLK +E  P T+  +AKL  +    P  + VV G    A A LA   
Sbjct: 119 APLIGAIAAGNTVVLKPSELAPATSALLAKLIPKY-FDPEAVAVVEGGVEVATALLAEPF 177

Query: 274 DVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFY 333
           D   + FTG    GKIV E AAK +L PVTLELGGKSP I+  DA+++ A     +  F 
Sbjct: 178 D--HIFFTGSPAVGKIVMEAAAK-HLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFL 234

Query: 334 NQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVG-DPFKSGVEQGPQIDPEQFQKVLR 392
           N GQ C A     VHE + DE +E+ K +A++   G DP +S  + G  I+   F ++  
Sbjct: 235 NAGQTCIAPDYVLVHESIKDELIEELK-KAIKEFYGEDPKESP-DYGRIINERHFDRLAS 292

Query: 393 YIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVT 427
            +      +  +  GG       Y + PT+  DV+
Sbjct: 293 LL-----DDGKVVIGGQVDKEERY-IAPTILDDVS 321

ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426

>gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins

 Score =  158 bits (402), Expect = 1e-43
 Identities = 106/344 (30%), Positives = 161/344 (46%), Gaps = 24/344 (6%)

Query: 95  EDIDRAVATARKAFDEGPWPKMTPYERSRIMLRA-ADLIEKNMEELAALETWNNGKPYVQ 153
           ++ID   +  R  F  G   K    E     L+     ++ N E +      + G+P  +
Sbjct: 5   DEIDSIHSRLRATFRSG---KTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFE 61

Query: 154 SLKSEV-PMVVRLLHYYAG---WA--DKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWN 206
           +L +EV  +   +LH       WA  +K+    +    G   I+   EP+GV   I PWN
Sbjct: 62  TLLTEVSGVKNDILHMLKNLKKWAKDEKVKDGPLAFMFGKPRIR--KEPLGVVLIIGPWN 119

Query: 207 FPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAG 266
           +P+LL    +  A+  G T+VLK +E TP TA  +A+L  +  L P    VV G  P   
Sbjct: 120 YPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVPKY-LDPDAFQVVQGGVPETT 178

Query: 267 AALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVEL 326
           A L    D  K+ +TG    G+I+ E AAK +L PVTLELGGKSP I+  +AD++ A + 
Sbjct: 179 ALLEQKFD--KIFYTGSGRVGRIIAEAAAK-HLTPVTLELGGKSPVIVTKNADLELAAKR 235

Query: 327 AHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQ 386
             +  F N GQ C A     V   VYDEFVE+ K + +         +  +    ++P  
Sbjct: 236 ILWGKFGNAGQICVAPDYVLVDPSVYDEFVEELK-KVLDEFYPGGANASPDYTRIVNPRH 294

Query: 387 FQKVLRYIRSGIESNATLECGGDR-LGNRGYFVQPTVFSDVTVS 429
           F ++   +     +   +  GG+     R  F+ PT+ SDV+  
Sbjct: 295 FNRLKSLLD---TTKGKVVIGGEMDEATR--FIPPTIVSDVSWD 333

Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436

>gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating]

 Score =  161 bits (407), Expect = 2e-43
 Identities = 125/390 (32%), Positives = 193/390 (49%), Gaps = 23/390 (5%)

Query: 47  EPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARK 106
           +P +PP       NLI G FV++ S     V +P T EV++ V     E+   AV+ A++
Sbjct: 107 QPQMPP----RVPNLIGGSFVESQSSSFIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQ 162

Query: 107 AFDEGPWPKMTPYE-RSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRL 165
           AF   P  + TP   R R+ML+  +LI KNM++LA   T   GK    S   ++   + +
Sbjct: 163 AF---PLWRNTPITTRQRVMLKFQELIRKNMDKLAMNITTEQGKTLKDS-HGDIFRGLEV 218

Query: 166 LHYYAGWADKIHGLTVPGDGN-YHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGN 224
           + +  G A    G  +P   N     ++ EP+GV   I P+NFP ++  W    A+TCGN
Sbjct: 219 VEHACGMATLQMGEYLPNVSNGVDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGN 278

Query: 225 TIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHC 284
           T +LK +E+ P  ++ +A+L  EAGLP GVLN+V G   T   A+    D+  +SF G  
Sbjct: 279 TFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGTNDTVN-AICDDEDIRAVSFVGSN 337

Query: 285 DTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSR 344
             G  +   AA    K +   +G K+  ++  DA++D  +     A F   GQ C A S 
Sbjct: 338 TAGMHIYARAAAKG-KRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALST 396

Query: 345 TYV---HERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESN 401
                  +   D+ VE+AK  A++   G   +   + GP I  +  +++ R I+SG++  
Sbjct: 397 VVFVGDAKSWEDKLVERAK--ALKVTCGS--EPDADLGPVISKQAKERICRLIQSGVDDG 452

Query: 402 ATLECGGDRLGNRGY----FVQPTVFSDVT 427
           A L   G  +   GY    F+ PT+ S VT
Sbjct: 453 AKLLLDGRDIVVPGYEKGNFIGPTILSGVT 482

Length = 604

>gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member

 Score =  157 bits (399), Expect = 7e-43
 Identities = 107/364 (29%), Positives = 166/364 (45%), Gaps = 22/364 (6%)

Query: 70  ASGKTFPVYDPRTAEVIANVAEGDAEDID---RAVATARKAFDEGPWPKMTPYERSRIML 126
           A+G      +P   + IA V E   ED +   RA   A K + + P PK     R  I+ 
Sbjct: 31  ANGPLVSSVNPANNQPIAEVVEASLEDYEEGLRACEEAAKIWMQVPAPK-----RGEIVR 85

Query: 127 RAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-G 185
           +  D +   ++ L  L +   GK   + +  EV  ++ +  +  G + +++G  +P +  
Sbjct: 86  QIGDALRAKLDYLGRLVSLEMGKILAEGI-GEVQEIIDMCDFAVGLSRQLNGSIIPSERP 144

Query: 186 NYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLF 245
           N+ +  +  P+G+ G I  +NFP  +  W    AL CGN +V K A  TPL  + + KL 
Sbjct: 145 NHMMMEVWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAMTKLV 204

Query: 246 HEA----GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKP 301
            E      LP  +     G G   G A+A    +  +SFTG    G +VQ+    +    
Sbjct: 205 AEVLEKNNLPGAIFTSFCG-GAEIGEAIAKDTRIPLVSFTGSSKVGLMVQQ-TVNARFGK 262

Query: 302 VTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKA 361
             LEL G +  I+ DDAD+  AV    FA     GQ C    R  +HE +YD+ +E+   
Sbjct: 263 CLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLEQLLT 322

Query: 362 RAMRRIVGDPFKSGVEQGPQIDPEQ---FQKVLRYIRSGIESNATLECGGDRLGNRGYFV 418
              +  +GDP + G   GP   PE    F+K +  I+S       +  GG  + + G FV
Sbjct: 323 VYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKS---QGGKILTGGSAIESEGNFV 379

Query: 419 QPTV 422
           QPT+
Sbjct: 380 QPTI 383

Length = 508

>gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional

 Score =  155 bits (394), Expect = 4e-42
 Identities = 103/324 (31%), Positives = 163/324 (50%), Gaps = 21/324 (6%)

Query: 59  KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
           K   +G++  ++SGK+  + +P T +    V     E++++A+ +A+ A  +  W K   
Sbjct: 17  KYYADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAKAA--QKAWAKTPL 74

Query: 119 YERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVR---LLHYYA----- 170
           ++R+ ++ +AA +++++   +A        KP     K  V  VVR   L+ Y A     
Sbjct: 75  WKRAELLHKAAAILKEHKAPIAECLVKEIAKP----AKDAVTEVVRSGDLISYTAEEGVR 130

Query: 171 --GWADKIHGLTVPGDG-NYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIV 227
             G    +   + PG+  N +  T   P+GV   I P+N+P+ L   K+APAL  GN +V
Sbjct: 131 ILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNAVV 190

Query: 228 LKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTG 287
           LK   Q  + AL++   FH AG P G+++ V+G G   G  L  H  V+ +SFTG  DTG
Sbjct: 191 LKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGG-DTG 249

Query: 288 KIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYV 347
             +   + K+ + P+ +ELGGK   I+ +DAD+D A        F   GQ C A     V
Sbjct: 250 IAI---SKKAGMVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLV 306

Query: 348 HERVYDEFVEKAKARAMRRIVGDP 371
            E V D  VEK  A+  +  VG P
Sbjct: 307 MESVADALVEKVNAKVAKLTVGPP 330

Length = 496

>gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1

 Score =  153 bits (388), Expect = 4e-41
 Identities = 120/408 (29%), Positives = 180/408 (44%), Gaps = 27/408 (6%)

Query: 28  RESSRARGISRFSTAAVVEEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDP-RTAEVI 86
           R  S  R + R +   +       P+       +I G+ V   SG+      P     V+
Sbjct: 9   RPGSPERDLLRKALKELKGRMEEIPL-------VIGGEEV-WTSGERIYQVSPHNHQAVL 60

Query: 87  ANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIE-KNMEELAALETW 145
           A       E  ++AV  A  A  E  W  +  Y+R+ I L+AADL+      E+ A    
Sbjct: 61  AKATNATEELANKAVEAALDAKKE--WSLLPFYDRAAIFLKAADLLSGPYRAEILAATML 118

Query: 146 NNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG---LTVPGDGNYHIQTLHEPI-GVAGQ 201
              K   Q+    V  ++    + A +A +++    ++ PG+ N   +T + P+ G    
Sbjct: 119 GQSKTVYQAEIDAVAELIDFFRFNAKYARELYEQQPISAPGEWN---RTEYRPLEGFVYA 175

Query: 202 IVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGY 261
           I P+NF  +      APAL  GNT++ K ++   L+   V ++  EAGLPPGV+N V G 
Sbjct: 176 ISPFNFTAIAGNLAGAPALM-GNTVIWKPSDTAMLSNYLVMRILEEAGLPPGVINFVPGD 234

Query: 262 GPTAGAALASHMDVDKLSFTGHCDT-----GKIVQELAAKSNLKPVTLELGGKSPFIIFD 316
           GP     + +  D+  + FTG   T      ++ Q L    N   +  E GGK   ++  
Sbjct: 235 GPLVSDTVLADPDLAGIHFTGSTPTFKHLWKQVAQNLDRYHNFPRIVGETGGKDFHVVHP 294

Query: 317 DADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGV 376
            ADV+  V       F  QGQ C A SR YV   ++  F  +  A   R  VGDP   G 
Sbjct: 295 SADVEHVVSGTIRGAFEYQGQKCSACSRLYVPHSLWPRFKGRLLAELSRVKVGDPDDFGT 354

Query: 377 EQGPQIDPEQFQKVLRYIR--SGIESNATLECGGDRLGNRGYFVQPTV 422
             G  ID + F K+++YI       S  T+  GG    + GYFV+PTV
Sbjct: 355 FMGAVIDEKSFAKIVKYIEHAKSDPSALTILAGGKYDDSVGYFVEPTV 402

This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532

>gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like

 Score =  150 bits (382), Expect = 7e-41
 Identities = 100/315 (31%), Positives = 144/315 (45%), Gaps = 26/315 (8%)

Query: 125 MLRAADLIEKNMEEL-AALETWNNGKPYVQSLKSEVPMVV-------RLLHYYAGWADKI 176
            L+ A  I    EE+ AAL      KP  +   +E+  V+       + L  +       
Sbjct: 28  RLKKA--ILARREEIIAALAADF-RKPAAEVDLTEILPVLSEINHAIKHLKKWMKPKRVR 84

Query: 177 HGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
             L + G     I+  +EP GV   I PWN+P  L    +  A+  GNT +LK +E TP 
Sbjct: 85  TPLLLFGT-KSKIR--YEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPH 141

Query: 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
           T+  +AK+  EA      + V  G    A A L   +  D + FTG    GKIV   AAK
Sbjct: 142 TSAVIAKIIREA-FDEDEVAVFEGDAEVAQALLE--LPFDHIFFTGSPAVGKIVMAAAAK 198

Query: 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 356
            +L  VTLELGGKSP I+ + AD+ +A +   +  F N GQ C A    +VHE V D FV
Sbjct: 199 -HLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFLNAGQTCIAPDYVFVHESVKDAFV 257

Query: 357 EKAKARAMRRIVGDPFKSGVEQGPQ----IDPEQFQKVLRYIRSGIESNATLECGGDRLG 412
           E  KA  + +  G    +  +  P     ++   F ++   +   +   A +E GG    
Sbjct: 258 EHLKA-EIEKFYGK--DAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQFDA 314

Query: 413 NRGYFVQPTVFSDVT 427
            + Y   PTV ++VT
Sbjct: 315 AQRYIA-PTVLTNVT 328

Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433

>gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

 Score =  153 bits (389), Expect = 5e-40
 Identities = 112/365 (30%), Positives = 174/365 (47%), Gaps = 27/365 (7%)

Query: 69   AASGKTFPVYDP-RTAEVIANVAEGDAEDIDRAVATARKAFDEGP-WPKMTPYERSRIML 126
             A+G+  PV +P    +++  V E    ++++A+ +A  A    P W    P ER+ I+ 
Sbjct: 655  VAAGEMSPVINPADPRDIVGYVREATPAEVEQALESAVNA---APIWFATPPAERAAILE 711

Query: 127  RAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGN 186
            RAADL+E  M+ L  L     GK +  ++ +EV   V  L YYAG              +
Sbjct: 712  RAADLMEAQMQTLMGLLVREAGKTFSNAI-AEVREAVDFLRYYAGQVR----------DD 760

Query: 187  YHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFH 246
            +   T H P+G    I PWNFPL +FT +VA AL  GN+++ K AEQTPL A    ++  
Sbjct: 761  FDNDT-HRPLGPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRILL 819

Query: 247  EAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE-----LAAKSNLKP 301
            EAG+P GV+ ++ G G T GAAL +   V  + FTG  +  +++Q      L  +    P
Sbjct: 820  EAGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLAGRLDPQGRPIP 879

Query: 302  VTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKA 361
            +  E GG++  I+   A  +Q V     + F + GQ C A     + + V D  ++  + 
Sbjct: 880  LIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDDVADRTLKMLRG 939

Query: 362  RAMRRI-VGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNAT---LECGGDRLGNRGYF 417
             AM    +G+P +   + GP ID E    + R+I++                     G F
Sbjct: 940  -AMAECRMGNPDRLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQSGTF 998

Query: 418  VQPTV 422
            V PT+
Sbjct: 999  VPPTL 1003

Length = 1318

>gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like

 Score =  146 bits (371), Expect = 2e-39
 Identities = 95/304 (31%), Positives = 142/304 (46%), Gaps = 31/304 (10%)

Query: 105 RKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELA-ALETWNNGKPYVQSLKSEVPMVV 163
           + AF   P P +   ER   + R   L+  N + LA A+      +   ++L +E+   +
Sbjct: 8   KAAFLANPPPSLE--ERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSI 65

Query: 164 RLLHYY----AGW--ADKIH-GLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKV 216
             + +       W    + H GL         ++  ++P+GV G IVPWN+PL L    +
Sbjct: 66  AGIKHARKHLKKWMKPSRRHVGLLFLPAKAE-VE--YQPLGVVGIIVPWNYPLYL---AL 119

Query: 217 AP---ALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHM 273
            P   AL  GN +++K +E TP T+  +A+L  E       + VV+G G    AA  S +
Sbjct: 120 GPLIAALAAGNRVMIKPSEFTPRTSALLAELLAEY-FDEDEVAVVTG-GADVAAAF-SSL 176

Query: 274 DVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFY 333
             D L FTG    G+ V   AA+ NL PVTLELGGKSP II  DAD+ +A E   F    
Sbjct: 177 PFDHLLFTGSTAVGRHVMRAAAE-NLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLL 235

Query: 334 NQGQCCCAGSRTYVHERVYDEFVEKAKARAMRR---IVGDPFKSGVEQGPQIDPEQFQKV 390
           N GQ C A     V E   +EFV  AKA   +    +  +P  + +     I+   + ++
Sbjct: 236 NAGQTCVAPDYVLVPEDKLEEFVAAAKAAVAKMYPTLADNPDYTSI-----INERHYARL 290

Query: 391 LRYI 394
              +
Sbjct: 291 QGLL 294

Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434

>gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17

 Score =  146 bits (372), Expect = 8e-39
 Identities = 108/360 (30%), Positives = 159/360 (44%), Gaps = 32/360 (8%)

Query: 83  AEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIE-KNMEELAA 141
           A V+A     DA  +++A+  A +A  E  W +M   +R+ I L+AADL+  K   EL A
Sbjct: 57  AHVLATYHYADAALVEKAIEAALEARKE--WARMPFEDRAAIFLKAADLLSGKYRYELNA 114

Query: 142 LETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQ 201
                 GK   Q+       ++  L +   +A+++          Y  Q L  P GV  +
Sbjct: 115 ATMLGQGKNVWQAEIDAACELIDFLRFNVKYAEEL----------YAQQPLSSPAGVWNR 164

Query: 202 ------------IVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAG 249
                       + P+NF  +      APAL  GN ++ K ++   L+   V K+  EAG
Sbjct: 165 LEYRPLEGFVYAVSPFNFTAIGGNLAGAPALM-GNVVLWKPSDTAVLSNYLVYKILEEAG 223

Query: 250 LPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDT-----GKIVQELAAKSNLKPVTL 304
           LPPGV+N V G GP  G  + +   +  L FTG   T      +I + L        +  
Sbjct: 224 LPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSLWKQIGENLDRYRTYPRIVG 283

Query: 305 ELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAM 364
           E GGK+  ++   ADVD  V       F  QGQ C A SR YV E ++ E  E+      
Sbjct: 284 ETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLWPEVKERLLEELK 343

Query: 365 RRIVGDPFKSGVEQGPQIDPEQFQKVLRYI-RSGIESNATLECGGDRLGNRGYFVQPTVF 423
              +GDP       G  ID + F ++  YI  +  +  A +  GG    + GYFV+PTV 
Sbjct: 344 EIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVI 403

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522

>gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like

 Score =  144 bits (366), Expect = 2e-38
 Identities = 84/238 (35%), Positives = 122/238 (51%), Gaps = 19/238 (7%)

Query: 194 EPIGVAGQIVPWNFPLLLFTWKVAP---ALTCGNTIVLKSAEQTPLTALYVAKLFHEAGL 250
           EP GV   I PWN+P  L    +AP   A+  GNT VLK +E TP T+  +AK+  E   
Sbjct: 99  EPYGVVLIIAPWNYPFQL---ALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKIIEET-F 154

Query: 251 PPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKS 310
               + VV G        L    D   + FTG    GKIV E AAK +L PVTLELGGKS
Sbjct: 155 DEEYVAVVEGGVEENQELLDQKFD--YIFFTGSVRVGKIVMEAAAK-HLTPVTLELGGKS 211

Query: 311 PFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGD 370
           P I+ +DA++  A +   +  F N GQ C A     VHE V ++F+++ K    +    D
Sbjct: 212 PCIVDEDANLKLAAKRIVWGKFLNAGQTCVAPDYVLVHESVKEKFIKELKEEIKKFYGED 271

Query: 371 PFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRG-YFVQPTVFSDVT 427
           P +S  + G  I+ + F ++   + +G      +  GG+   +R   +++PT+  +VT
Sbjct: 272 PLESP-DYGRIINEKHFDRLAGLLDNG-----KIVFGGN--TDRETLYIEPTILDNVT 321

Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449

>gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional

 Score =  143 bits (361), Expect = 7e-38
 Identities = 107/363 (29%), Positives = 164/363 (45%), Gaps = 33/363 (9%)

Query: 79  DPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEE 138
           +P T E ++ +    A+DI+ A+  A   F +  W +     R++ +      +    EE
Sbjct: 13  NPATGEQLSVLPWAGADDIENALQLAAAGFRD--WRETNIDYRAQKLRDIGKALRARSEE 70

Query: 139 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYA--GWADKIHGLTVPGDGNYHIQTLHEPI 196
           +A + T   GKP  Q+ ++EV     L  +YA  G A      T+  +    I+  + P+
Sbjct: 71  MAQMITREMGKPINQA-RAEVAKSANLCDWYAEHGPAMLKAEPTLVENQQAVIE--YRPL 127

Query: 197 GVAGQIVPWNFPLLLFTWKV----APALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPP 252
           G    I+PWNFPL    W+V     P L  GN  +LK A      A  +A++F +AG+P 
Sbjct: 128 GTILAIMPWNFPL----WQVMRGAVPILLAGNGYLLKHAPNVMGCAQLIAQVFKDAGIPQ 183

Query: 253 GVLNVVSGYGPTAGAALASHMDVDK----LSFTGHCDTGKIVQELAAKSNLKPVTLELGG 308
           GV   ++     A     S M  D     ++ TG    G  +   A  + LK   LELGG
Sbjct: 184 GVYGWLN-----ADNDGVSQMINDSRIAAVTVTGSVRAGAAIGAQAGAA-LKKCVLELGG 237

Query: 309 KSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIV 368
             PFI+ +DAD++ AV+ A    + N GQ C A  R  + E +   F E+  A A    +
Sbjct: 238 SDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKM 297

Query: 369 GDPFKSGVEQGP----QIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFS 424
           GDP       GP     +  E   +V   +  G    A L  GG+++   G +  PTV +
Sbjct: 298 GDPRDEENALGPMARFDLRDELHHQVEATLAEG----ARLLLGGEKIAGAGNYYAPTVLA 353

Query: 425 DVT 427
           +VT
Sbjct: 354 NVT 356

Length = 462

>gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional

 Score =  125 bits (317), Expect = 1e-31
 Identities = 92/294 (31%), Positives = 137/294 (46%), Gaps = 24/294 (8%)

Query: 93  DAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRA-ADLIEKNMEEL-AALETWNNGKP 150
           + E I   V   +++F  G   K  P E  +  LR    ++E+N +E   A+   + G+ 
Sbjct: 5   NPEIIPPIVKKLKESFLTG---KTRPLEFRKQQLRNLLRMLEENKQEFSEAVHK-DLGRH 60

Query: 151 YVQSLKSEVPMVVRLLHYYAGWADK--------IHGLTVPGDGNYHIQTLHEPIGVAGQI 202
             ++  +EV + V  + +     D+          G+  PG          EP+GV   I
Sbjct: 61  PFETKMTEVLLTVAEIEHLLKHLDEYLKPEKVDTVGVFGPGKSYII----PEPLGVVLVI 116

Query: 203 VPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYG 262
             WN+PL L    +A A+  GNT+VLK +E +P T+  +AKL  +  L P  + V+ G  
Sbjct: 117 GAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLTKY-LDPSYVRVIEGGV 175

Query: 263 PTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQ 322
                 L    D   + FTG    GK+V + AA+ NL P TLELGGKSP I+    ++  
Sbjct: 176 EVTTELLKEPFDH--IFFTGSPRVGKLVMQAAAE-NLTPCTLELGGKSPVIVDKSCNLKV 232

Query: 323 AVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVG-DPFKSG 375
           A     +  F N GQ C A     VH  + D+F+E  K  A++   G DP KS 
Sbjct: 233 AARRIAWGKFLNAGQTCVAPDYVLVHRSIKDKFIEALK-EAIKEFFGEDPKKSE 285

Length = 493

>gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins

 Score =  123 bits (311), Expect = 6e-31
 Identities = 106/348 (30%), Positives = 154/348 (44%), Gaps = 49/348 (14%)

Query: 100 AVATARKAFDEGPWPKMTPYERSRIMLRA-ADLIEKNMEE-LAALETWNNGKPYVQSLKS 157
           AV  AR+AF  G   K  P E     L A   ++E+N +E + AL   +  KP  +++ S
Sbjct: 3   AVRRAREAFSSG---KTRPLEFRIQQLEALLRMLEENEDEIVEALAK-DLRKPKFEAVLS 58

Query: 158 EVPMVVR----LLHYYAGWADKIH---GLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLL 210
           E+ +V       +     W         L    D  Y I    EP+GV   I  WN+PL 
Sbjct: 59  EILLVKNEIKYAISNLPEWMKPEPVKKNLATLLDDVY-IY--KEPLGVVLIIGAWNYPLQ 115

Query: 211 LFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLP----PGVLNVVSGYGPTAG 266
           L    +  A+  GN +V+K +E +P TA  +A+L     +P         VV G      
Sbjct: 116 LTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAEL-----IPKYLDKECYPVVLGGVEETT 170

Query: 267 AALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVEL 326
             L    D   + +TG    GKIV + AAK +L PVTLELGGKSP  +    D+D A   
Sbjct: 171 ELLKQRFD--YIFYTGSTSVGKIVMQAAAK-HLTPVTLELGGKSPCYVDKSCDIDVAARR 227

Query: 327 AHFALFYNQGQCCCAGSRTYV--HERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDP 384
             +  F N GQ C A    YV     V ++FVE  K + ++   G+  K   + G  I+ 
Sbjct: 228 IAWGKFINAGQTCIAPD--YVLCTPEVQEKFVEALK-KTLKEFYGEDPKESPDYGRIIND 284

Query: 385 EQFQKVLRYIRSGIESNATLECGG-----DRLGNRGYFVQPTVFSDVT 427
             FQ++ + +  G      +  GG     +R      ++ PTV +DV 
Sbjct: 285 RHFQRLKKLLSGG-----KVAIGGQTDEKER------YIAPTVLTDVK 321

NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443

>gnl|CDD|143455 cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins

 Score =  109 bits (274), Expect = 5e-26
 Identities = 84/256 (32%), Positives = 117/256 (45%), Gaps = 27/256 (10%)

Query: 99  RAVATARKAFDEGPWPKMTPYERSRIMLRA-ADLIEKNMEEL-AALETWNNGKPYVQSLK 156
           R V   R+ F  G   +    E  +  L+    L+++N +++ AAL   + GKP  +S +
Sbjct: 3   RLVRELRETFRSG---RTRSAEWRKSQLKGLLRLVDENEDDIFAALRQ-DLGKPSAESFR 58

Query: 157 SEVPMVVR--------LLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFP 208
            EV ++V         L  + A    K    T P       + + EP+GV   I  WNFP
Sbjct: 59  DEVSVLVSSCKLAIKELKKWMAPEKVKTPLTTFPAKA----EIVSEPLGVVLVISAWNFP 114

Query: 209 LLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAA 268
            LL    V  A+  GN +VLK +E  P T+  +AKL     L    + V+ G G     A
Sbjct: 115 FLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLI-PEYLDTKAIKVIEG-GVPETTA 172

Query: 269 LASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVE--- 325
           L      DK+ FTG    G+I+   AAK +L PVTLELGGK P I+    D+  AV    
Sbjct: 173 LLEQ-KWDKIFFTGSPRVGRIIMAAAAK-HLTPVTLELGGKCPVIVDSTVDLKVAVRRIA 230

Query: 326 LAHFALFYNQGQCCCA 341
              +    N GQ C A
Sbjct: 231 GGKWGC--NNGQACIA 244

Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. Length = 432

>gnl|CDD|143403 cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like

 Score =  102 bits (256), Expect = 1e-23
 Identities = 65/278 (23%), Positives = 107/278 (38%), Gaps = 12/278 (4%)

Query: 99  RAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSE 158
           RA+  A          ++   +R+  + R    +     ++AA      GK ++ +    
Sbjct: 3   RALLAADI--STKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGWMFAENIC 60

Query: 159 VPMVVRLLHYYAGWADKIHGLTV---PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWK 215
              V      +  ++ +I                     P G    I  +NFPL +   +
Sbjct: 61  GDQVQLRARAFVIYSYRIPHEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQ 120

Query: 216 VAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAG-LPPGVLNVVSGYGPTAGAALASHMD 274
           +A AL  GN +++K      +    + +L H AG LPP  + +++G G T   AL  H +
Sbjct: 121 LAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPEDVTLINGDGKT-MQALLLHPN 179

Query: 275 VDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDAD-VDQAVELAHFALFY 333
              + FTG        ++LA  +    + LEL G +  ++  DA  VD         +  
Sbjct: 180 PKMVLFTGSSRVA---EKLALDAKQARIYLELAGFNWKVLGPDAQAVDYVAWQCVQDMTA 236

Query: 334 NQGQCCCAGSRTYVHERVYDE-FVEKAKARAMRRIVGD 370
             GQ C A S  +V E       VEK KA   RR + D
Sbjct: 237 CSGQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLED 274

ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. Length = 442

>gnl|CDD|237016 PRK11903, PRK11903, aldehyde dehydrogenase; Provisional

 Score = 99.8 bits (249), Expect = 1e-22
 Identities = 105/402 (26%), Positives = 161/402 (40%), Gaps = 59/402 (14%)

Query: 59  KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
            N + G++  A SG   P++DP T E +  V      D+  A A AR+    G   +   
Sbjct: 6   ANYVAGRWQ-AGSGAGTPLFDPVTGEELVRV-SATGLDLAAAFAFARE--QGGAALRALT 61

Query: 119 YERSRIMLRA-ADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
           Y +   +L A   +++ N +    + T N+G     S   ++   +  L YYA     + 
Sbjct: 62  YAQRAALLAAIVKVLQANRDAYYDIATANSGTTRNDS-AVDIDGGIFTLGYYAKLGAALG 120

Query: 178 GLTVPGDGN---------YHIQTLHEPI-GVAGQIVPWNFPLLLFTW----KVAPALTCG 223
              +  DG          +  Q +  P  GVA  I  +NFP     W    K APAL  G
Sbjct: 121 DARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNFP----AWGLWEKAAPALLAG 176

Query: 224 NTIVLKSAEQTPLTALYVAKLFHEAG-LPPGVLNVVSGYGPTAGAALASHMD-VDKLSFT 281
             +++K A  T      + K    AG LP G L+VV G    + A L  H+   D +SFT
Sbjct: 177 VPVIVKPATATAWLTQRMVKDVVAAGILPAGALSVVCG----SSAGLLDHLQPFDVVSFT 232

Query: 282 GHCDTGKIVQELAA--KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQ---- 335
           G  +T  +++   A  + +++ V +E    +  ++  DA          F LF  +    
Sbjct: 233 GSAETAAVLRSHPAVVQRSVR-VNVEADSLNSALLGPDAAPGSEA----FDLFVKEVVRE 287

Query: 336 -----GQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKV 390
                GQ C A  R +V E +YD   E   AR  +  VG+P   GV  GP +   Q   V
Sbjct: 288 MTVKSGQKCTAIRRIFVPEALYDAVAEALAARLAKTTVGNPRNDGVRMGPLVSRAQLAAV 347

Query: 391 LRYIRSGIE---SNATLECGGDRLG------NRGYFVQPTVF 423
               R+G+    + A +   G               V PT+ 
Sbjct: 348 ----RAGLAALRAQAEVLFDGGGFALVDADPAVAACVGPTLL 385

Length = 521

>gnl|CDD|165847 PLN02203, PLN02203, aldehyde dehydrogenase

 Score = 88.2 bits (219), Expect = 8e-19
 Identities = 71/251 (28%), Positives = 111/251 (44%), Gaps = 29/251 (11%)

Query: 90  AEGDAEDIDRAVATARKAFDEG-----PWPKMTPYERSRIMLRAADLIEKNMEELAALET 144
            E   E ++ +VA  R+ ++ G      W K     + + +LR   L++ N E +     
Sbjct: 1   EEAPGETLEGSVAELRETYESGRTRSLEWRK----SQLKGLLR---LLKDNEEAIFKALH 53

Query: 145 WNNGKPYVQSLKSEVPMVVR----LLHYYAGWADKIHG----LTVPGDGNYHIQTLHEPI 196
            + GK  V++ + EV ++ +     L     W          +  P       + + EP+
Sbjct: 54  QDLGKHRVEAYRDEVGVLTKSANLALSNLKKWMAPKKAKLPLVAFPATA----EVVPEPL 109

Query: 197 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLN 256
           GV      WNFP+ L    +  A+  GN +VLK +E  P T+ ++A       L    + 
Sbjct: 110 GVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAANI-PKYLDSKAVK 168

Query: 257 VVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFD 316
           V+ G GP  G  L  H   DK+ FTG    G+I+   AAK +L PV LELGGK P  I D
Sbjct: 169 VIEG-GPAVGEQLLQH-KWDKIFFTGSPRVGRIIMTAAAK-HLTPVALELGGKCP-CIVD 224

Query: 317 DADVDQAVELA 327
                +  ++A
Sbjct: 225 SLSSSRDTKVA 235

Length = 484

>gnl|CDD|143446 cd07128, ALDH_MaoC-N, N-terminal domain of the monoamine oxidase C dehydratase

 Score = 88.1 bits (219), Expect = 9e-19
 Identities = 111/409 (27%), Positives = 163/409 (39%), Gaps = 72/409 (17%)

Query: 59  KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGP-WPKMT 117
           ++ + GQ+  A +G    ++D  T EV+A V+  +  D   AVA AR+    GP    +T
Sbjct: 2   QSYVAGQWH-AGTGDGRTLHDAVTGEVVARVS-SEGLDFAAAVAYARE--KGGPALRALT 57

Query: 118 PYERSRIMLRA-ADLIEKNMEELAALETWNNGKP---------------YVQSLKSEVPM 161
            +ER+  ML+A A  + +  E+L AL                          SL      
Sbjct: 58  FHERAA-MLKALAKYLMERKEDLYALSAATGATRRDSWIDIDGGIGTLFAYASLGRRELP 116

Query: 162 VVRLLHYYAGWADKIHGLTVPGDGNY---HIQTLHEPI-GVAGQIVPWNFPLLLFTW--- 214
               L         +  L+   DG +   HI T   P  GVA  I  +NFP+    W   
Sbjct: 117 NAHFLV-----EGDVEPLSK--DGTFVGQHILT---PRRGVAVHINAFNFPV----WGML 162

Query: 215 -KVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAG-LPPGVLNVVSGYGPTAGAALASH 272
            K APAL  G  +++K A  T      V K   E+G LP G L ++ G   + G  L   
Sbjct: 163 EKFAPALLAGVPVIVKPATATAYLTEAVVKDIVESGLLPEGALQLICG---SVGDLLDHL 219

Query: 273 MDVDKLSFTGHCDTGKIVQ---ELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHF 329
            + D ++FTG   T   ++    + A+S       E    +  I+  DA          F
Sbjct: 220 GEQDVVAFTGSAATAAKLRAHPNIVARS--IRFNAEADSLNAAILGPDATPGTP----EF 273

Query: 330 ALFYNQ---------GQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP 380
            LF  +         GQ C A  R +V E   D  +E  KAR  + +VGDP   GV  GP
Sbjct: 274 DLFVKEVAREMTVKAGQKCTAIRRAFVPEARVDAVIEALKARLAKVVVGDPRLEGVRMGP 333

Query: 381 QIDPEQFQKVLRYIRSGIESNATLECGGDRL------GNRGYFVQPTVF 423
            +  EQ + V   + + +     +  G DR         +G F  PT+ 
Sbjct: 334 LVSREQREDVRAAVATLLAEAEVVFGGPDRFEVVGADAEKGAFFPPTLL 382

The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. Length = 513

>gnl|CDD|177831 PLN02174, PLN02174, aldehyde dehydrogenase family 3 member H1

 Score = 86.6 bits (214), Expect = 3e-18
 Identities = 81/258 (31%), Positives = 120/258 (46%), Gaps = 25/258 (9%)

Query: 94  AEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME-ELAALETWNNGKPYV 152
           A D    V   R++FD+G       YE     L+   +I  N E E+ A    + GKP +
Sbjct: 9   AADASILVTELRRSFDDG---VTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPEL 65

Query: 153 QS-------LKSEVPMVVRLL-HYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVP 204
           +S       L++ + + ++ L ++ A    K    T P       + + EP+GV   I  
Sbjct: 66  ESSVYEVSLLRNSIKLALKQLKNWMAPEKAKTSLTTFPASA----EIVSEPLGVVLVISA 121

Query: 205 WNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPT 264
           WN+P LL    V  A++ GN +VLK +E  P ++  +AKL  E  L    + VV G    
Sbjct: 122 WNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLL-EQYLDSSAVRVVEGAVTE 180

Query: 265 AGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAV 324
             A L      DK+ +TG    G+++   AAK +L PV LELGGKSP ++  D+D D  V
Sbjct: 181 TTALLEQKW--DKIFYTGSSKIGRVIMAAAAK-HLTPVVLELGGKSPVVV--DSDTDLKV 235

Query: 325 ELAHFALFY---NQGQCC 339
            +          N GQ C
Sbjct: 236 TVRRIIAGKWGCNNGQAC 253

Length = 484

>gnl|CDD|131331 TIGR02278, PaaN-DH, phenylacetic acid degradation protein paaN

 Score = 73.3 bits (180), Expect = 8e-14
 Identities = 109/389 (28%), Positives = 169/389 (43%), Gaps = 43/389 (11%)

Query: 60  NLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGP-WPKMTP 118
           + ++G++     G+  PV D  T EV+A V   +  D+  AVA AR+    GP    +T 
Sbjct: 3   SYLSGEWRTGQ-GEGVPVRDASTGEVLARVT-SEGLDVAAAVAWAREV--GGPALRALTF 58

Query: 119 YERSRIMLRA-ADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADK-- 175
           +ER+R ML+A A  + +  E L AL            +  +  +    L  Y+    +  
Sbjct: 59  HERAR-MLKALAQYLSERKEALYALAATTGATRRDNWVDIDGGIGT--LFTYSSLGRREL 115

Query: 176 ------IHGLTVP--GDGNYHIQTLHEPI-GVAGQIVPWNFPLLLFTWKVAPALTCGNTI 226
                       P   DG++  + +  P  GVA QI  +NFP+     K APA   G   
Sbjct: 116 PDANLIPEDEFEPLSKDGSFQGRHILTPKGGVAVQINAFNFPVWGLLEKFAPAFLAGVPT 175

Query: 227 VLKSAEQTPLTALYVAKLFHEAGL-PPGVLNVVSGYGPTAGAALASHMDV-DKLSFTGHC 284
           + K A  T   A  + +   E+GL P G L ++ G   +AG  L  H+D  D ++FTG  
Sbjct: 176 LAKPATPTAYVAEALVRTMVESGLLPEGSLQLICG---SAGD-LLDHLDHRDVVAFTGSA 231

Query: 285 DTGKIVQELAAKSNLK----PVTLELGGKSPFIIFDDADVDQAVELAHFA------LFYN 334
            T      L A  N+         E    +  I+ +DA  D+  E   FA      L   
Sbjct: 232 ATA---DRLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEP-EFDLFAQEIVRELTIK 287

Query: 335 QGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYI 394
            GQ C A  R  V + + +  ++  +AR  + ++GDP + GV+ GP +  EQ   V   +
Sbjct: 288 AGQKCTAIRRVIVPKALLEAVLKALQARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAV 347

Query: 395 RSGIESNATLECGG-DRLGNRGYFVQPTV 422
            + + + A +  GG  RL   G F  PT+
Sbjct: 348 AALLAAGAEVRLGGPGRL--DGAFFPPTL 374

This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has domains which are members of the pfam00171 and pfam01575 families. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. Length = 663

>gnl|CDD|143444 cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12

 Score = 71.0 bits (174), Expect = 4e-13
 Identities = 87/326 (26%), Positives = 137/326 (42%), Gaps = 27/326 (8%)

Query: 60  NLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPY 119
           NL+ G++  A++  T    DP   +   +V + D ++I+  V + R+    G    +   
Sbjct: 1   NLVAGKWKGASNYTTLL--DPLNGDKFISVPDTDEDEINEFVDSLRQCPKSGLHNPLKNP 58

Query: 120 ER----SRIMLRAADLIEKNMEE--LAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWA 173
           ER      +  R A  + K   E   A L      K   Q+L  EV +  + L  +AG  
Sbjct: 59  ERYLLYGDVSHRVAHELRKPEVEDFFARLIQRVAPKSDAQAL-GEVVVTRKFLENFAG-- 115

Query: 174 DKIH----GLTVPGDGNYHIQTLHE---PIGVAGQIVPWNFPLLLFTWKVAPALTCGNTI 226
           D++        VPGD  +  Q       P G    I P+NFPL +   ++  AL  GN  
Sbjct: 116 DQVRFLARSFNVPGD--HQGQQSSGYRWPYGPVAIITPFNFPLEIPALQLMGALFMGNKP 173

Query: 227 VLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDT 286
           +LK   +  +      +L H  G+P   ++++   GPT    L    +     FTG   +
Sbjct: 174 LLKVDSKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPTMNKIL-LEANPRMTLFTG---S 229

Query: 287 GKIVQELAAKSNLKPVTLELGGKSPFIIFDD-ADVDQAVELAHFALFYNQGQCCCAGSRT 345
            K+ + LA + + K V LE  G    I+  D +DVD          +   GQ C A S  
Sbjct: 230 SKVAERLALELHGK-VKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSIL 288

Query: 346 YVHER-VYDEFVEKAKARAMRRIVGD 370
           + HE  V    ++K KA A +R + D
Sbjct: 289 FAHENWVQAGILDKLKALAEQRKLED 314

Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. Length = 489

>gnl|CDD|236931 PRK11563, PRK11563, bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional

 Score = 70.7 bits (174), Expect = 5e-13
 Identities = 80/264 (30%), Positives = 112/264 (42%), Gaps = 48/264 (18%)

Query: 188 HIQTLHEPI-GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQT-PLTALYVAKLF 245
           HI T   P+ GVA  I  +NFP+     K+APA   G   ++K A  T  LT   V +L 
Sbjct: 143 HILT---PLEGVAVHINAFNFPVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVV-RLI 198

Query: 246 HEAG-LPPGVLNVVSGYGPTAGAALASHMDV-DKLSFTGHCDTGKIVQELAAKSNLKPVT 303
            E+G LP G L ++ G   +AG  L  H+D  D ++FTG   T    Q+L A  N+    
Sbjct: 199 VESGLLPEGALQLICG---SAGDLL-DHLDGQDVVTFTGSAATA---QKLRAHPNV---- 247

Query: 304 LELGGKSPFIIFDDAD--------VDQAVELAHFALFYNQ---------GQCCCAGSRTY 346
             +    PF    +AD         D       F LF  +         GQ C A  R  
Sbjct: 248 --VANSVPFTA--EADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAI 303

Query: 347 VHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLEC 406
           V   + D  +E  +AR  + +VGDP   GV  G     EQ + V   + + + + A +  
Sbjct: 304 VPRALVDAVIEALRARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAA-LLAAAEIVF 362

Query: 407 GG-DRL------GNRGYFVQPTVF 423
           GG D          +G F  PT+ 
Sbjct: 363 GGPDSFEVVGADAEKGAFFPPTLL 386

Length = 675

>gnl|CDD|143396 cd07077, ALDH-like, NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family

 Score = 61.5 bits (149), Expect = 3e-10
 Identities = 59/259 (22%), Positives = 97/259 (37%), Gaps = 24/259 (9%)

Query: 117 TPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSL-----------KSEVPMVVRL 165
              +R  I+   A+ +    + LA+      G  Y++SL           +S++   +  
Sbjct: 14  HDEQRDLIINAIANALYDTRQRLASEAVSERGA-YIRSLIANWIAMMGCSESKLYKNIDT 72

Query: 166 LHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNT 225
                     I  + +P +G  +++    PIGV   I+P   PL   T      +   N 
Sbjct: 73  ERGITASVGHIQDVLLPDNGETYVRA--FPIGVTMHILPSTNPLSGIT-SALRGIATRNQ 129

Query: 226 IVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALA----SHMDVDKLSFT 281
            + +     P T   +A LF  A        ++  Y P     LA    SH  +D +  T
Sbjct: 130 CIFRPHPSAPFTNRALALLFQAA-DAAHGPKILVLYVPHPSDELAEELLSHPKIDLIVAT 188

Query: 282 GHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCA 341
           G  D    V      S   PV     G SP ++ + AD ++A    H + F++Q   C +
Sbjct: 189 GGRD---AVDAAVKHSPHIPVIGFGAGNSPVVVDETADEERASGSVHDSKFFDQ-NACAS 244

Query: 342 GSRTYVHERVYDEFVEKAK 360
               YV + V D   E+ K
Sbjct: 245 EQNLYVVDDVLDPLYEEFK 263

The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 397

>gnl|CDD|143447 cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase

 Score = 59.1 bits (144), Expect = 2e-09
 Identities = 68/253 (26%), Positives = 102/253 (40%), Gaps = 31/253 (12%)

Query: 97  IDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEEL---AALETWNNGKPYVQ 153
           +D A A A  AF+   +  ++P  R+  +   AD IE   +EL   A  ET   G P  +
Sbjct: 1   VDAAAAAAAAAFES--YRALSPARRAAFLEAIADEIEALGDELVARAHAET---GLPEAR 55

Query: 154 SLKSEVPMVVRLLHYYA------GWADKIHGLTVPG---DGNYHIQTLHEPIGVAGQIVP 204
            L+ E+      L  +A       W D       P         ++ +  P+G       
Sbjct: 56  -LQGELGRTTGQLRLFADLVREGSWLDARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGA 114

Query: 205 WNFPLLLFTWKV-----APALTCGNTIVLKSAEQTPLTALYVAKLFHEA----GLPPGVL 255
            NFP     + V     A AL  G  +V+K+    P T+  VA+    A    GLP GV 
Sbjct: 115 SNFP---LAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRAALRATGLPAGVF 171

Query: 256 NVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL-KPVTLELGGKSPFII 314
           +++ G G   G AL  H  +  + FTG    G+ + + AA      P   ELG  +P  I
Sbjct: 172 SLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPVFI 231

Query: 315 FDDADVDQAVELA 327
              A  ++   +A
Sbjct: 232 LPGALAERGEAIA 244

Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. Length = 454

>gnl|CDD|143400 cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins

 Score = 46.5 bits (110), Expect = 2e-05
 Identities = 45/195 (23%), Positives = 79/195 (40%), Gaps = 9/195 (4%)

Query: 183 GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVL----KSAEQTPLTA 238
           GD N     + EPIGV   I P   P     +K   +L   N+I+     ++ + T   A
Sbjct: 83  GDENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAA 142

Query: 239 LYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN 298
             + +    AG P  ++  +          L     +  L  TG    G  V + AA S+
Sbjct: 143 TLLLQAAVAAGAPENLIGWIDNPSIELAQRLMKFPGIGLLLATG----GPAVVK-AAYSS 197

Query: 299 LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 358
            KP      G +P +I + AD+ +AV+    +  ++ G  C +     V + VYDE +  
Sbjct: 198 GKPAIGVGAGNTPVVIDETADIKRAVQSIVKSKTFDNGVICASEQSVIVVDSVYDEVMRL 257

Query: 359 AKARAMRRIVGDPFK 373
            + +   ++  +  +
Sbjct: 258 FEGQGAYKLTAEELQ 272

Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. Length = 439

>gnl|CDD|143440 cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like

 Score = 40.9 bits (97), Expect = 0.001
 Identities = 67/288 (23%), Positives = 107/288 (37%), Gaps = 49/288 (17%)

Query: 97  IDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAAL---ET----WNNGK 149
           +D  V  ARKA  E  +   +  +  +I+   A       EELA +   ET        K
Sbjct: 1   VDELVERARKAQRE--FATFSQEQVDKIVEAVAWAAADAAEELAKMAVEETGMGVVE-DK 57

Query: 150 PYVQSLKSEVPMVVRLLHYYAG-------WADKIHGLTVPGDGNYHIQTLHEPIGVAGQI 202
                  SE      + +             D+  G+            + EP+GV   +
Sbjct: 58  VIKNHFASEY-----VYNDIKDMKTVGVIEEDEEKGIV----------EIAEPVGVIAAL 102

Query: 203 VPWNFPLLLFTWKVAPALTCGNTIVL----KSAEQTPLTALYVAKLFHEAGLPPGVLNVV 258
           +P   P     +K   AL   N I+     ++ + +   A  + +    AG P G++  +
Sbjct: 103 IPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAGAPEGLIQWI 162

Query: 259 SGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELG---GKSPFIIF 315
                     L  H DVD +  TG      +V+  AA S+ KP    +G   G  P  I 
Sbjct: 163 EEPSIELTQELMKHPDVDLILATG---GPGMVK--AAYSSGKPA---IGVGPGNVPAYID 214

Query: 316 DDADVDQAVE-LAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKAR 362
           + AD+ +AV+ +     F N G  C +     V + +YDE   + K R
Sbjct: 215 ETADIKRAVKDIILSKTFDN-GTICASEQSVIVDDEIYDEVRAELKRR 261

Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. Length = 436

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	456
KOG2450	501	consensus Aldehyde dehydrogenase [Energy productio	100.0
PLN02466	538	aldehyde dehydrogenase family 2 member	100.0
KOG2451	503	consensus Aldehyde dehydrogenase [Energy productio	100.0
COG1012	472	PutA NAD-dependent aldehyde dehydrogenases [Energy	100.0
PRK11241	482	gabD succinate-semialdehyde dehydrogenase I; Provi	100.0
PLN02419	604	methylmalonate-semialdehyde dehydrogenase [acylati	100.0
PLN02766	501	coniferyl-aldehyde dehydrogenase	100.0
cd07142	476	ALDH_F2BC Arabidosis aldehyde dehydrogenase family	100.0
cd07140	486	ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge	100.0
PLN02278	498	succinic semialdehyde dehydrogenase	100.0
TIGR03374	472	ABALDH 1-pyrroline dehydrogenase. Members of this	100.0
cd07113	477	ALDH_PADH_NahF Escherichia coli NAD+-dependent phe	100.0
PLN02315	508	aldehyde dehydrogenase family 7 member	100.0
cd07141	481	ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro	100.0
PLN02467	503	betaine aldehyde dehydrogenase	100.0
PRK13252	488	betaine aldehyde dehydrogenase; Provisional	100.0
cd07117	475	ALDH_StaphAldA1 Uncharacterized Staphylococcus aur	100.0
cd07559	480	ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep	100.0
cd07143	481	ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh	100.0
TIGR03216	481	OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy	100.0
cd07123	522	ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate	100.0
cd07091	476	ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families	100.0
cd07085	478	ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog	100.0
TIGR01236	533	D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy	100.0
cd07119	482	ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be	100.0
cd07097	473	ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent	100.0
TIGR02299	488	HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd	100.0
PRK13473	475	gamma-aminobutyraldehyde dehydrogenase; Provisiona	100.0
PRK09847	494	gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen	100.0
cd07086	478	ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip	100.0
TIGR01804	467	BADH glycine betaine aldehyde dehydrogenase. Betai	100.0
PRK09457	487	astD succinylglutamic semialdehyde dehydrogenase;	100.0
cd07144	484	ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd	100.0
cd07116	479	ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen	100.0
cd07124	512	ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl	100.0
cd07138	466	ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac	100.0
cd07130	474	ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se	100.0
cd07139	471	ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy	100.0
cd07088	468	ALDH_LactADH-AldA Escherichia coli lactaldehyde de	100.0
PRK13968	462	putative succinate semialdehyde dehydrogenase; Pro	100.0
TIGR01237	511	D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy	100.0
cd07131	478	ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen	100.0
TIGR03240	484	arg_catab_astD succinylglutamic semialdehyde dehyd	100.0
cd07128	513	ALDH_MaoC-N N-terminal domain of the monoamine oxi	100.0
cd07083	500	ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-	100.0
cd07111	480	ALDH_F16 Aldehyde dehydrogenase family 16A1-like.	100.0
PRK03137	514	1-pyrroline-5-carboxylate dehydrogenase; Provision	100.0
PRK09406	457	gabD1 succinic semialdehyde dehydrogenase; Reviewe	100.0
cd07151	465	ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd	100.0
TIGR01780	448	SSADH succinate-semialdehyde dehydrogenase. SSADH	100.0
TIGR01722	477	MMSDH methylmalonic acid semialdehyde dehydrogenas	100.0
TIGR03250	472	PhnAcAld_DH putative phosphonoacetaldehyde dehydro	100.0
TIGR02278	663	PaaN-DH phenylacetic acid degradation protein paaN	100.0
cd07120	455	ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh	100.0
PF00171	462	Aldedh: Aldehyde dehydrogenase family; InterPro: I	100.0
cd07118	454	ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr	100.0
PRK09407	524	gabD2 succinic semialdehyde dehydrogenase; Reviewe	100.0
cd07112	462	ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent	100.0
cd07145	456	ALDH_LactADH_F420-Bios Methanocaldococcus jannasch	100.0
PLN00412	496	NADP-dependent glyceraldehyde-3-phosphate dehydrog	100.0
PRK11903	521	aldehyde dehydrogenase; Provisional	100.0
cd07107	456	ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde	100.0
cd07089	459	ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric	100.0
cd07110	456	ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro	100.0
cd07115	453	ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy	100.0
TIGR01238	500	D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy	100.0
cd07148	455	ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si	100.0
cd07109	454	ALDH_AAS00426 Uncharacterized Saccharopolyspora sp	100.0
cd07150	451	ALDH_VaniDH_like Pseudomonas putida vanillin dehyd	100.0
cd07125	518	ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d	100.0
cd07090	457	ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty	100.0
PRK11563	675	bifunctional aldehyde dehydrogenase/enoyl-CoA hydr	100.0
cd07082	473	ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat	100.0
cd07114	457	ALDH_DhaS Uncharacterized Candidatus pelagibacter	100.0
cd07101	454	ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi	100.0
cd07106	446	ALDH_AldA-AAD23400 Streptomyces aureofaciens putat	100.0
cd07126	489	ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de	100.0
PLN02174	484	aldehyde dehydrogenase family 3 member H1	100.0
cd07099	453	ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di	100.0
cd07094	453	ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende	100.0
cd07103	451	ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald	100.0
cd07108	457	ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a	100.0
cd07092	450	ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g	100.0
cd07102	452	ALDH_EDX86601 Uncharacterized aldehyde dehydrogena	100.0
cd07147	452	ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1	100.0
cd07152	443	ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen	100.0
cd07146	451	ALDH_PhpJ Streptomyces putative phosphonoformaldeh	100.0
cd07098	465	ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and	100.0
cd07093	455	ALDH_F8_HMSADH Human aldehyde dehydrogenase family	100.0
cd07100	429	ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi	100.0
PRK11904	1038	bifunctional proline dehydrogenase/pyrroline-5-car	100.0
cd07095	431	ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde	100.0
cd07149	453	ALDH_y4uC Uncharacterized ALDH (y4uC) with similar	100.0
PRK11809	1318	putA trifunctional transcriptional regulator/proli	100.0
cd07135	436	ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde	100.0
PLN02203	484	aldehyde dehydrogenase	100.0
TIGR02288	551	PaaN_2 phenylacetic acid degradation protein paaN.	100.0
cd07104	431	ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen	100.0
cd07105	432	ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l	100.0
PRK10090	409	aldehyde dehydrogenase A; Provisional	100.0
PRK11905	1208	bifunctional proline dehydrogenase/pyrroline-5-car	100.0
cd07136	449	ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr	100.0
cd07137	432	ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m	100.0
PTZ00381	493	aldehyde dehydrogenase family protein; Provisional	100.0
cd07127	549	ALDH_PAD-PaaZ Phenylacetic acid degradation protei	100.0
cd07133	434	ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l	100.0
cd07134	433	ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro	100.0
cd07132	443	ALDH_F3AB Aldehyde dehydrogenase family 3 members	100.0
cd07087	426	ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl	100.0
KOG2452	881	consensus Formyltetrahydrofolate dehydrogenase [Nu	100.0
cd07081	439	ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh	100.0
cd07129	454	ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr	100.0
cd07084	442	ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent	100.0
KOG2454	583	consensus Betaine aldehyde dehydrogenase [Energy p	100.0
cd07078	432	ALDH NAD(P)+ dependent aldehyde dehydrogenase fami	100.0
COG4230	769	Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene	100.0
cd07121	429	ALDH_EutE Ethanolamine utilization protein EutE-li	100.0
cd07122	436	ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr	100.0
TIGR02518	488	EutH_ACDH acetaldehyde dehydrogenase (acetylating)	100.0
PRK15398	465	aldehyde dehydrogenase EutE; Provisional	100.0
KOG2456	477	consensus Aldehyde dehydrogenase [Energy productio	100.0
KOG2455	561	consensus Delta-1-pyrroline-5-carboxylate dehydrog	100.0
PRK13805	862	bifunctional acetaldehyde-CoA/alcohol dehydrogenas	100.0
KOG2453	507	consensus Aldehyde dehydrogenase [Energy productio	100.0
cd07079	406	ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu	100.0
PRK00197	417	proA gamma-glutamyl phosphate reductase; Provision	100.0
PLN02418	718	delta-1-pyrroline-5-carboxylate synthase	100.0
TIGR00407	398	proA gamma-glutamyl phosphate reductase. The prosi	100.0
cd07077	397	ALDH-like NAD(P)+-dependent aldehyde dehydrogenase	100.0
cd06534	367	ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s	100.0
TIGR01092	715	P5CS delta l-pyrroline-5-carboxylate synthetase. T	100.0
cd07080	422	ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Ac	100.0
COG0014	417	ProA Gamma-glutamyl phosphate reductase [Amino aci	99.89
KOG4165	433	consensus Gamma-glutamyl phosphate reductase [Amin	99.77
PF05893	399	LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR0086	99.67
PRK11905	1208	bifunctional proline dehydrogenase/pyrroline-5-car	98.52
KOG2449	157	consensus Methylmalonate semialdehyde dehydrogenas	98.2
PF07368	215	DUF1487: Protein of unknown function (DUF1487); In	97.68
PRK11809	1318	putA trifunctional transcriptional regulator/proli	96.17
PF00815	412	Histidinol_dh: Histidinol dehydrogenase; InterPro:	88.26
COG0141	425	HisD Histidinol dehydrogenase [Amino acid transpor	87.62
COG1438	150	ArgR Arginine repressor [Transcription]	83.04
PRK13769	368	histidinol dehydrogenase; Provisional	82.41

>KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=4.4e-96  Score=725.22  Aligned_cols=397  Identities=57%  Similarity=0.946  Sum_probs=388.4

Q ss_pred             CceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 012806           59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEE  138 (456)
Q Consensus        59 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~  138 (456)
                      ++||||+|+++.++++++++||.||+++++|++++.+||+.+|++||+||+.+.|++++..+|.++|+++++++++++++
T Consensus        22 ~lfin~e~~~~~s~kt~~~~nP~tg~~i~~v~~~~~~dVd~aV~aAr~Af~~~~W~~~~~~~R~~~L~~~Adlie~~~~~  101 (501)
T KOG2450|consen   22 GLFINGEFVDSVSGKTFPVVNPATGEVIAKVAEATEEDVDEAVKAARSAFKLVDWAKRDAAERGRLLRKLADLIEQDADV  101 (501)
T ss_pred             heeecCeeecccCCceeeeecCCCCCeEEEeccccHHHHHHHHHHHHHhcCcCccccCCHHHHHHHHHHHHHHHHhhhHH
Confidence            89999999999999999999999999999999999999999999999999977799999999999999999999999999


Q ss_pred             HHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHH
Q 012806          139 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAP  218 (456)
Q Consensus       139 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~  218 (456)
                      |+.+.+.+.|||+.+++..++..+++.+|||++|+++.++...+.++.+..|+.++|+|||+.|+|||||+.+..|+++|
T Consensus       102 lA~~E~~d~GKp~~~a~~~Dl~~~~~~~ry~ag~ad~~~~~~~~~~~~~~~yt~~eP~GV~G~I~pWN~Pllm~awKlaP  181 (501)
T KOG2450|consen  102 LAALEVLDNGKPYPEALVSDLPPAIDCFRYYAGWADKIHGSTIPTDGEFFAYTRREPIGVCGQIIPWNFPLLMQAWKLAP  181 (501)
T ss_pred             HhhhcccccCCcchhhhhcCchhhhhHHHhhccchhhcccccCCCCCceEEEecCCcceeeeEeccCchHHHHHHHhhhh
Confidence            99999999999999999789999999999999999999998888888899999999999999999999999999999999


Q ss_pred             HhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCC
Q 012806          219 ALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN  298 (456)
Q Consensus       219 ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~  298 (456)
                      ||++||+||+||++++|+|++.++++++++|+|+|++|+|+|.|.+.+.+|.+|++|++|+||||+.+|+.|++.++++|
T Consensus       182 ALa~GNtvV~Kpae~tplsal~~~~l~~eaG~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGSt~~G~~I~~aaa~~n  261 (501)
T KOG2450|consen  182 ALAAGNTVVLKPAEQTPLTALYLASLCKEAGFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGSTPVGKEIMEAAAESN  261 (501)
T ss_pred             HHhhCcEEEecCCCCCCchHHHHHHHhHHhcCCcceEEEccCCCchHHHHHhhCCCCceEEecCCCcchhHHhhhhhhcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999889


Q ss_pred             CccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhh-hhcCCCCCCCCc
Q 012806          299 LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMR-RIVGDPFKSGVE  377 (456)
Q Consensus       299 ~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~-~~~g~p~~~~~~  377 (456)
                      +|++++|+|||+|+||++|+|+|+|++.+..+.|+|+||+|++.+|+|||+++||+|++++++++++ +++|||+++++.
T Consensus       262 ~K~vtLElGGKsp~Ivf~Dadld~av~~~~~~iF~nqGq~C~a~sR~~Vqe~iydefv~~~v~~a~~~~kvGdP~~~~~~  341 (501)
T KOG2450|consen  262 LKPVTLELGGKSPIIVFDDADLDLAVENAAFGIFFNQGQCCTAGSRVFVQESIYDEFVEKFVAAAKKKLKVGDPFDEGTE  341 (501)
T ss_pred             CceeccccCCCCcceEecccchHHHHHHHHHHhhcccccccccCceeEEechHHHHHHHHHHHHHhcccccCCCCCcccc
Confidence            9999999999999999999999999999999999999999999999999999999999999999966 999999999999


Q ss_pred             cCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          378 QGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       378 ~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      +||++++.|+++|.+||+.++++||++++||.+.+++||||+||||.+|.++|.+..| +||||+.|+++++.||+|++
T Consensus       342 qG~~i~~~q~ekI~~yi~~~k~eGa~l~~gG~~~g~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPVv~v~~F~t~eE~i~~  420 (501)
T KOG2450|consen  342 QGPQISKTQYEKILGYIESGKKEGATLLCGGVRLGDKGYFIKPTVFTNVTDDMRIAKEEIFGPVVVVLKFKTEEEVIER  420 (501)
T ss_pred             cccccCHHHHHHHHHHHHHHHhcCCEEEecCcccCCCceEECCeeccCCChhhhhhHhhccCceEEEEecCcHHHHHHH
Confidence            9999999999999999999999999999999888889999999999999999977776 99999999999999999985

>PLN02466 aldehyde dehydrogenase family 2 member

Probab=100.00  E-value=3.6e-92  Score=739.59  Aligned_cols=453  Identities=76%  Similarity=1.227  Sum_probs=425.7

Q ss_pred             hhhhhhhhhcccCCCCCcccccccccCCcccccccccccc-ccccCCCCCCCCCCccCceeCCEEeeCCCCCeeeeecCC
Q 012806            3 AARRISTLLSRSFPSASPSLLRSLGRESSRARGISRFSTA-AVVEEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPR   81 (456)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~I~G~~~~~~~~~~~~v~~P~   81 (456)
                      |+||+|+|+||++.++++.+.++.++++...|++++|+|. +++++++.|++.+.+.++||||+|+...++++++++||.
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~G~~~~~~~~~~~~v~~P~   81 (538)
T PLN02466          2 AARRISSLLSRSLSASSSALLRSRGRNGGRGRGIRRFSTAAAAVEEPITPPVQVSYTQLLINGQFVDAASGKTFPTLDPR   81 (538)
T ss_pred             CchHHHHHHHHHhhcccHHHhhhccccCCCCccccccccccccccCcCCCccccccccceECCEEecCCCCCeEEeECCC
Confidence            5688999999999888877788888888899999999985 458889999999999999999999987778999999999


Q ss_pred             CCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhccHHH
Q 012806           82 TAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPM  161 (456)
Q Consensus        82 tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~  161 (456)
                      ||+++++++.++.+|+++|+++|++||+++.|+.++.++|.++|+++++.|++++++|++++++|+|||+.+++..|+..
T Consensus        82 tg~~i~~v~~~~~~dv~~Av~aA~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~GK~~~~a~~~Ev~~  161 (538)
T PLN02466         82 TGEVIAHVAEGDAEDVNRAVAAARKAFDEGPWPKMTAYERSRILLRFADLLEKHNDELAALETWDNGKPYEQSAKAELPM  161 (538)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHcCcCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence            99999999999999999999999999985569999999999999999999999999999999999999999987569999


Q ss_pred             HHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHH
Q 012806          162 VVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYV  241 (456)
Q Consensus       162 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l  241 (456)
                      +++.++||+.+.++..+...+..++...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+
T Consensus       162 ~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~l~~~~i~pALaaGN~VVlKPs~~tp~~~~~l  241 (538)
T PLN02466        162 FARLFRYYAGWADKIHGLTVPADGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYA  241 (538)
T ss_pred             HHHHHHHHHHHHHHhcCcccccCCCceEEEEEecceEEEEECCCchHHHHHHHHHhHHHHcCCEEEeECCCCCcHHHHHH
Confidence            99999999999888877665544445678999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEEcCCCCHH
Q 012806          242 AKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVD  321 (456)
Q Consensus       242 ~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~~daD~d  321 (456)
                      +++|+++|+|+|++|+|+|++.+.+..|..|+++|+|+||||+.+|+.|.+.+++.++||+++|+|||||+||++|||+|
T Consensus       242 ~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTGS~~~G~~v~~~aa~~~l~pv~lElGGknp~iV~~dADl~  321 (538)
T PLN02466        242 AKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAAKSNLKPVTLELGGKSPFIVCEDADVD  321 (538)
T ss_pred             HHHHHhcCCCcccEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHhcCCCcEEEEcCCCCeEEEcCCCCHH
Confidence            99999999999999999998888899999999999999999999999999998854899999999999999999999999


Q ss_pred             HHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcC
Q 012806          322 QAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESN  401 (456)
Q Consensus       322 ~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~G  401 (456)
                      .|++.+++++|.|+||.|++++|||||+++||+|+++|++++.++++|+|+|+++++||++++++++++.++|++++++|
T Consensus       322 ~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~G  401 (538)
T PLN02466        322 KAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRVVGDPFKKGVEQGPQIDSEQFEKILRYIKSGVESG  401 (538)
T ss_pred             HHHHHHHHHHHhhcCCCcCcCcEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCCccCCCHHHHHHHHHHHHHHHHCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          402 ATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       402 a~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      +++++||++.+++|+|++|||+.+++++|+++.+ +||||++|+.++|.+|+|++
T Consensus       402 a~v~~gg~~~~~~g~~i~Ptvl~~v~~d~~i~~eE~FGPVl~v~~~~d~deAi~~  456 (538)
T PLN02466        402 ATLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDEVIRR  456 (538)
T ss_pred             CEEEecCCcCCCCceEEEEEEEecCCCCCchhcCCccCcEEEEEEeCCHHHHHHH
Confidence            9999999876567999999999999999977775 99999999999999999875

>KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=1.8e-90  Score=656.17  Aligned_cols=395  Identities=37%  Similarity=0.607  Sum_probs=377.0

Q ss_pred             ccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 012806           57 YTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM  136 (456)
Q Consensus        57 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~  136 (456)
                      ..+.||+|+|+++.++++|++.||++||+|+.+++.+.+|.+.||++|.+||+  .|++++..||.++|+|+.++|.+|.
T Consensus        23 ~~~~~igGkWv~s~~~~tF~V~nPa~geii~~V~~~~V~e~~kAI~aA~EaF~--s~~~~takeRs~lLrkwy~Li~en~  100 (503)
T KOG2451|consen   23 RAQSYIGGKWVDSPDNKTFEVDNPANGEIIGKVADMTVEEAEKAIDAAYEAFK--SYRNLTAKERSALLRKWYELIMENK  100 (503)
T ss_pred             chhccccceeeccCCCCeeeccCCCccchhhcccCCcHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHhch
Confidence            45789999999998999999999999999999999999999999999999999  8999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCC-CCcceEEEeeccceEEEEccCCchHHHHHhH
Q 012806          137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWK  215 (456)
Q Consensus       137 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~  215 (456)
                      |+|++++++|+|||..++. +||..+..+++||++.+++..|...+.. .+....+.++|+||+++|+|||||..+...+
T Consensus       101 ddLa~iiTlE~GKpL~eA~-gEv~y~a~f~eWyAeEA~RvyGdii~s~~~~rr~i~ikQPvGV~alItPWNFP~AMItRK  179 (503)
T KOG2451|consen  101 DDLATIITLENGKPLGEAK-GEVAYSAAFFEWYAEEARRVYGDIIPSLNPNRRLIVIKQPVGVVALITPWNFPAAMITRK  179 (503)
T ss_pred             HHHHHHHhhhcCCchhhcc-ceeehhHHHHHHHHHHhhhhhccccCCCCCCceEEEEeccceeEEEecCcCChHHHHHhH
Confidence            9999999999999999998 7999999999999999999999987643 4566788999999999999999999999999


Q ss_pred             HHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCC---chhhHHHHhcCCCccEEEEecChhHHHHHHH
Q 012806          216 VAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGY---GPTAGAALASHMDVDKLSFTGHCDTGKIVQE  292 (456)
Q Consensus       216 ~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~---~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~  292 (456)
                      ..+||++||+||+||++.||++++.++++..+||+|+|++|+|+++   ..+.++.|+.+|+|++|+||||+.+|+.+++
T Consensus       180 ~gAALAaGCTvVvkPs~~TPlsaLala~lA~~AGiP~Gv~NVit~~~~~a~eig~~lctsp~VrkisFTGST~VGKiL~~  259 (503)
T KOG2451|consen  180 AGAALAAGCTVVVKPSEDTPLSALALAKLAEEAGIPAGVLNVITADASNAAEIGKELCTSPDVRKISFTGSTNVGKILMA  259 (503)
T ss_pred             HHHHHhcCceEEEccCCCCchHHHHHHHHHHHcCCCCcceEEEecCCCChHHHHHHhhcCCceeeEEeeccchHHHHHHH
Confidence            9999999999999999999999999999999999999999999963   4578999999999999999999999999999


Q ss_pred             HHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCC
Q 012806          293 LAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPF  372 (456)
Q Consensus       293 ~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~  372 (456)
                      +++. ..|++.+||||+.|+||++|||+|+|++.....+|.|+||.|.+..|+|||+++||+|+.+|.++++++++||.+
T Consensus       260 qsas-tvKkvslELGGNAPfIVFddadld~Av~g~mA~KFr~~GQtCVcaNR~yVh~~iyD~Fv~~l~e~vkkl~vGdG~  338 (503)
T KOG2451|consen  260 QSAS-TVKKVSLELGGNAPFIVFDDADLDQAVEGAMACKFRNSGQTCVCANRVYVHDSIYDKFVSKLAEAVKKLKVGDGL  338 (503)
T ss_pred             hhhh-hhhheehhhcCCCceEEecCcCHHHHHHHHHHhhhccCCceeEecceeEEehhhHHHHHHHHHHHHHheeccCCC
Confidence            9988 899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCC-CCceEecEEEecCCCChHhhhc-cccceEEeEEEcccc
Q 012806          373 KSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGN-RGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVT  450 (456)
Q Consensus       373 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~-~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~  450 (456)
                      |+++.+||+|++.+.+|+..++++|+.+||++++||++..+ +++|++|||+.+|+++|-+..| .|||+.+|.++++.+
T Consensus       339 ~~~tt~GpLIne~av~Kve~~v~DAvsKga~ii~GGk~~~~lg~~fyePTvl~~V~~~m~~s~eEtFGPla~v~kFdtee  418 (503)
T KOG2451|consen  339 DPGTTQGPLINEKAVEKVEKHVEDAVSKGAKIILGGKERSELGPTFYEPTVLSNVTQNMLVSSEETFGPLASVFKFDTEE  418 (503)
T ss_pred             CCCCccCCccCHHHHHHHHHHHHHHHhcCCeEEeCCeEccccCCccccceEeecCCccceeeccccccccceeeeeCCHH
Confidence            99999999999999999999999999999999999995444 4599999999999999944445 999999999999999


Q ss_pred             ccccc
Q 012806          451 DCTSI  455 (456)
Q Consensus       451 eai~~  455 (456)
                      |+|++
T Consensus       419 Evi~~  423 (503)
T KOG2451|consen  419 EVIEW  423 (503)
T ss_pred             HHHHH
Confidence            99875

>COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion]

Probab=100.00  E-value=6e-86  Score=681.01  Aligned_cols=388  Identities=48%  Similarity=0.770  Sum_probs=370.3

Q ss_pred             CceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 012806           59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEE  138 (456)
Q Consensus        59 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~  138 (456)
                      ++||||+|++..+  +++++||.||+++++++.++.+|++.|+++|+.+|+  .|++++..+|.++|+++++.|+++.++
T Consensus         2 ~~~i~g~~~~~~~--~~~~~nP~tg~~i~~~~~a~~~dv~~Av~aA~~a~~--~W~~~~~~eR~~iL~~~a~~l~~~~~e   77 (472)
T COG1012           2 KLLIDGEWVDGAS--TIEVINPATGEVIATVPAATAEDVDAAVAAARAAFE--AWSRLSAEERAAILRRIADLLEARAEE   77 (472)
T ss_pred             CccCCCeecCCCC--ceeeeCCCCCCEEeeecCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence            6799999987554  999999999999999999999999999999999999  899999999999999999999999999


Q ss_pred             HHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHH
Q 012806          139 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAP  218 (456)
Q Consensus       139 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~  218 (456)
                      |+.++++|+|||+.+++ .|+..+++.++||++.+++..+...+.+.+...++.++|+|||++|+|||||+.+.+|+++|
T Consensus        78 la~~~~~e~Gk~i~ea~-~ei~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~k~ap  156 (472)
T COG1012          78 LAALITLETGKPISEAR-GEIARAADFIRYYAEEARRLEGETIPTDKGSKALVRREPLGVVGAITPWNFPLALAAWKLAP  156 (472)
T ss_pred             HHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccCCCCCcceEEEeecceEEEEECCCCCHHHHHHhhHHH
Confidence            99999999999999998 57999999999999999988877655444678899999999999999999999999999999


Q ss_pred             HhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCC
Q 012806          219 ALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN  298 (456)
Q Consensus       219 ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~  298 (456)
                      ||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|.+.+.++.|..||+|++|+||||+.+|+.|.+.+++ +
T Consensus       157 ALaaGntVV~KPse~tp~sa~~l~~~~~~aglP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt~~G~~i~~~Aa~-~  235 (472)
T COG1012         157 ALAAGNTVVLKPSEQTPLSALALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAA-N  235 (472)
T ss_pred             HHHcCCEEEEECcccCcHHHHHHHHHHHHhCCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECChHHHHHHHHHHhh-c
Confidence            999999999999999999999999999999999999999999887799999999999999999999999999999997 9


Q ss_pred             CccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhh-hhcCCCCCCCCc
Q 012806          299 LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMR-RIVGDPFKSGVE  377 (456)
Q Consensus       299 ~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~-~~~g~p~~~~~~  377 (456)
                      +||+++|||||+|+||++|||+|.|++.+++++|+|+||.|++.+|+|||+++||+|+++|.++ ++ +++|||+|+.++
T Consensus       236 ~k~~~lELGGk~p~IV~~dAdl~~Av~~~~~g~f~n~GQ~C~a~~R~~V~~~v~d~f~~~l~~~-~~~l~~Gd~~d~~t~  314 (472)
T COG1012         236 LKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLVAR-AASLKVGDPLDPSTD  314 (472)
T ss_pred             CCcEEEECCCCCCeEECCCCCHHHHHHHHHHHHHhCCCCCccCCeEEEEehhhHHHHHHHHHHH-HhcCCCCCCCCCCCc
Confidence            9999999999999999999999999999999999999999999999999999999999999999 65 899999999999


Q ss_pred             cCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          378 QGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       378 ~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      +||++++++++++.++|++++++|+.++.||++ .. |+|++|||+.+++++|+.+.| +||||++|++++|.||||++
T Consensus       315 ~Gpli~~~~~~~v~~~i~~a~~~G~~~~~Gg~~-~~-g~~~~PTv~~~v~~~~~i~~eEiFGPVl~v~~~~~~dEAi~l  391 (472)
T COG1012         315 LGPLISEEQLDRVEGYIEDAVAEGARLLAGGKR-PG-GYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIEL  391 (472)
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcC-CC-CeEECCEEEecCCCCChhhhccccCCceEEEEeCCHHHHHHH
Confidence            999999999999999999999999999999983 33 999999999999999977776 99999999999999999986

>PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional

Probab=100.00  E-value=1.7e-85  Score=682.70  Aligned_cols=394  Identities=37%  Similarity=0.620  Sum_probs=372.4

Q ss_pred             cCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 012806           58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME  137 (456)
Q Consensus        58 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~  137 (456)
                      .++||||+|+.+.++.+++++||.||+++++++.++.+|+++++++|++||+  .|+.++.++|.++|+++++.|+++++
T Consensus        11 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~v~~~~~~~~~~v~~av~~A~~a~~--~W~~~~~~~R~~~L~~~a~~l~~~~~   88 (482)
T PRK11241         11 QQALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTAKERANILRRWFNLMMEHQD   88 (482)
T ss_pred             ccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence            4689999998766788999999999999999999999999999999999999  99999999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCC-CCcceEEEeeccceEEEEccCCchHHHHHhHH
Q 012806          138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKV  216 (456)
Q Consensus       138 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~  216 (456)
                      +|++++++|+|||..+++ .|+..+++.++||+.++.+..+...+.. .+...+..++|+|||++|+|||||+.++++++
T Consensus        89 ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~  167 (482)
T PRK11241         89 DLARLMTLEQGKPLAEAK-GEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKA  167 (482)
T ss_pred             HHHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEeeceEEEEECCCcChHHHHHHHH
Confidence            999999999999999998 6999999999999998887665544321 23456788999999999999999999999999


Q ss_pred             HHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhh
Q 012806          217 APALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK  296 (456)
Q Consensus       217 ~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~  296 (456)
                      ++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+++|++.+.++.|+.|++++.|+||||+++|+.|.+.+++
T Consensus       168 ~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS~~~G~~i~~~aa~  247 (482)
T PRK11241        168 GPALAAGCTMVLKPASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCAK  247 (482)
T ss_pred             HHHHHhCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999878889999999999999999999999999999988


Q ss_pred             CCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCC
Q 012806          297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGV  376 (456)
Q Consensus       297 ~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~  376 (456)
                       +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++++
T Consensus       248 -~l~~~~lElGGknp~IV~~dADld~aa~~i~~~~f~~aGQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~  326 (482)
T PRK11241        248 -DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLEKGV  326 (482)
T ss_pred             -cCCcEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCC
Confidence             8999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          377 EQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       377 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      ++||++++.+++++.++|++++++|+++++||.....+|+|++|||+.+++++|+.+.+ +||||++|++|+|.+|+|++
T Consensus       327 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~GG~~~~~~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~  406 (482)
T PRK11241        327 TIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIAQ  406 (482)
T ss_pred             CcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCCCCCeEEeeEEEECCCCCChhhhCcCcCCEEEEEEeCCHHHHHHH
Confidence            99999999999999999999999999999999764346999999999999999977775 99999999999999999975

>PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating]

Probab=100.00  E-value=1e-84  Score=683.22  Aligned_cols=397  Identities=29%  Similarity=0.445  Sum_probs=372.4

Q ss_pred             CCCCccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHH
Q 012806           53 VQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLI  132 (456)
Q Consensus        53 ~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l  132 (456)
                      ..+...++||||+|+.+.++++++++||.||+++++++.++.+|+++|+++|++||+  .|+.++.++|.++|+++++.|
T Consensus       109 ~~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eR~~iL~k~a~~L  186 (604)
T PLN02419        109 QMPPRVPNLIGGSFVESQSSSFIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFP--LWRNTPITTRQRVMLKFQELI  186 (604)
T ss_pred             ccccccceeECCEEecCCCCceEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHH
Confidence            345566899999999766678899999999999999999999999999999999999  999999999999999999999


Q ss_pred             HHhHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCC-CCCcceEEEeeccceEEEEccCCchHHH
Q 012806          133 EKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLL  211 (456)
Q Consensus       133 ~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~  211 (456)
                      ++++++|++++++|+|||+.+++ .|+..+++.++||++++.+..+...+. ..+...++.++|+|||++|+|||||+.+
T Consensus       187 ~~~~~ela~~~~~E~GKp~~ea~-~EV~~~i~~~~~~a~~a~~~~g~~~~~~~~~~~~~~~reP~GVV~~I~PwNfPl~l  265 (604)
T PLN02419        187 RKNMDKLAMNITTEQGKTLKDSH-GDIFRGLEVVEHACGMATLQMGEYLPNVSNGVDTYSIREPLGVCAGICPFNFPAMI  265 (604)
T ss_pred             HHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCcccccCCCccceEEecCccEEEEECCCccHHHH
Confidence            99999999999999999999998 599999999999999988777655442 2344568899999999999999999999


Q ss_pred             HHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHH
Q 012806          212 FTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQ  291 (456)
Q Consensus       212 ~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~  291 (456)
                      .++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++ +.++.|+.|++|++|+||||+.+|+.|.
T Consensus       266 ~~~~iapALaAGNtVVlKPSe~tp~ta~~l~~l~~eAGlP~GvvnvV~G~~-~~~~~L~~~~~Vd~V~FTGSt~vG~~I~  344 (604)
T PLN02419        266 PLWMFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGTN-DTVNAICDDEDIRAVSFVGSNTAGMHIY  344 (604)
T ss_pred             HHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHhCcCcceEEEEeCCh-HHHHHHHhCCCCCEEEEeCChHHHHHHH
Confidence            999999999999999999999999999999999999999999999999964 6788899999999999999999999999


Q ss_pred             HHHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCC
Q 012806          292 ELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDP  371 (456)
Q Consensus       292 ~~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p  371 (456)
                      +.+++ +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++ +|+|+++|+++++++++|+|
T Consensus       345 ~~Aa~-~lk~v~LELGGknp~IV~~DADld~Aa~~iv~g~f~naGQ~C~A~~Rv~V~~~-~d~f~e~l~~~~~~l~vG~p  422 (604)
T PLN02419        345 ARAAA-KGKRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGD-AKSWEDKLVERAKALKVTCG  422 (604)
T ss_pred             HHHhc-cCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhhCCCCcCCCCEEEEeCc-HHHHHHHHHHHHHHhccCCC
Confidence            99887 89999999999999999999999999999999999999999999999999999 89999999999999999999


Q ss_pred             CCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCccc----CCCCceEecEEEecCCCChHhhhc-cccceEEeEEE
Q 012806          372 FKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRL----GNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIIL  446 (456)
Q Consensus       372 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~----~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~  446 (456)
                      .|+++++||++++++++++.++|++++++||++++||.+.    .+.|+|++||||.+++++|+++.+ +||||++|+.+
T Consensus       423 ~d~~t~~GPlis~~~~~~v~~~i~~A~~~GAkvl~GG~~~~~~~~~~G~f~~PTVL~~v~~d~~i~~eEiFGPVl~V~~~  502 (604)
T PLN02419        423 SEPDADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQA  502 (604)
T ss_pred             CCCCCCccCCCCHHHHHHHHHHHHHHHhcCCEEEeCCccccCCCCCCCeEEeeEEEeCCCCCCHHHcCCCcCCEEEEEec
Confidence            9999999999999999999999999999999999999752    146999999999999999977775 99999999999


Q ss_pred             ccccccccc
Q 012806          447 CVVTDCTSI  455 (456)
Q Consensus       447 ~~~~eai~~  455 (456)
                      ++.+|+|++
T Consensus       503 ~~~dEAI~l  511 (604)
T PLN02419        503 NSFDEAISI  511 (604)
T ss_pred             CCHHHHHHH
Confidence            999999975

>PLN02766 coniferyl-aldehyde dehydrogenase

Probab=100.00  E-value=1.4e-84  Score=679.40  Aligned_cols=402  Identities=54%  Similarity=0.905  Sum_probs=376.8

Q ss_pred             CCCccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 012806           54 QISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIE  133 (456)
Q Consensus        54 ~~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~  133 (456)
                      .+...++||||+|+.+.++++++++||.||+++++++.++.+|++.+++.|++||+.+.|+.++.++|.++|+++++.|+
T Consensus        17 ~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~   96 (501)
T PLN02766         17 EIKFTKLFINGEFVDAASGKTFETRDPRTGEVIARIAEGDKEDVDLAVKAAREAFDHGPWPRMSGFERGRIMMKFADLIE   96 (501)
T ss_pred             CcccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHH
Confidence            34455789999999776788999999999999999999999999999999999998556999999999999999999999


Q ss_pred             HhHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHH
Q 012806          134 KNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFT  213 (456)
Q Consensus       134 ~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~  213 (456)
                      +++++|++++++|+|||..+++..|+..+++.++||+..+.+..++..+...+...++.++|+|||++|+|||||+.+.+
T Consensus        97 ~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~  176 (501)
T PLN02766         97 EHIEELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKIHGETLKMSRQLQGYTLKEPIGVVGHIIPWNFPSTMFF  176 (501)
T ss_pred             HhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCCCceEEEEeccceEEEEECCCCChHHHHH
Confidence            99999999999999999998875699999999999999887776654443334457888999999999999999999999


Q ss_pred             hHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHH
Q 012806          214 WKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQEL  293 (456)
Q Consensus       214 ~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~  293 (456)
                      +++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+.+..|+.|+++|.|+||||+.+|+.|.+.
T Consensus       177 ~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~FTGS~~~G~~i~~~  256 (501)
T PLN02766        177 MKVAPALAAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQA  256 (501)
T ss_pred             HHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHhcCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999888899999999999999999999999999999


Q ss_pred             HhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCC
Q 012806          294 AAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFK  373 (456)
Q Consensus       294 ~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~  373 (456)
                      ++..+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|++
T Consensus       257 aa~~~l~~~~lElGGknp~iV~~dADl~~Aa~~i~~g~f~n~GQ~C~a~~ri~V~~si~d~f~~~l~~~~~~l~~G~p~~  336 (501)
T PLN02766        257 AATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVKKLVEKAKDWVVGDPFD  336 (501)
T ss_pred             hhhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCCC
Confidence            88448999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEcccccc
Q 012806          374 SGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDC  452 (456)
Q Consensus       374 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~ea  452 (456)
                      +++++||++++++++++.++|++++++|+++++||.....+|+|++|||+.+++++|+++.+ +||||++|+.++|.+|+
T Consensus       337 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~dea  416 (501)
T PLN02766        337 PRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVEEA  416 (501)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhCCccCceEEEEEeCCHHHH
Confidence            99999999999999999999999999999999999765457999999999999999977776 99999999999999999


Q ss_pred             ccc
Q 012806          453 TSI  455 (456)
Q Consensus       453 i~~  455 (456)
                      |++
T Consensus       417 i~~  419 (501)
T PLN02766        417 IKK  419 (501)
T ss_pred             HHH
Confidence            975

>cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like

Probab=100.00  E-value=3.8e-83  Score=666.97  Aligned_cols=400  Identities=70%  Similarity=1.163  Sum_probs=376.1

Q ss_pred             CccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 012806           56 SYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKN  135 (456)
Q Consensus        56 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~  135 (456)
                      +..++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+.+.|++++.++|.++|+++++.|+++
T Consensus         2 ~~~~~~i~g~~~~~~~~~~~~v~~P~t~~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~   81 (476)
T cd07142           2 KHTKLFINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWPRMTGYERSRILLRFADLLEKH   81 (476)
T ss_pred             CcccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcCCCchhhCCHHHHHHHHHHHHHHHHHh
Confidence            45678999999976677899999999999999999999999999999999999844699999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhH
Q 012806          136 MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWK  215 (456)
Q Consensus       136 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~  215 (456)
                      .++|++++++|+|||..+++..|+..+++.++||+.+.++..+...+..++...+..++|+|||++|+|||||+.+.+++
T Consensus        82 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~  161 (476)
T cd07142          82 ADELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIHGMTLPADGPHHVYTLHEPIGVVGQIIPWNFPLLMFAWK  161 (476)
T ss_pred             HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEeceeeEEEECCCccHHHHHHHH
Confidence            99999999999999999987569999999999999998877766554333445678899999999999999999999999


Q ss_pred             HHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHh
Q 012806          216 VAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA  295 (456)
Q Consensus       216 ~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a  295 (456)
                      +++||++||+||+|||+.+|+++..+++++.++|+|+|++++++|++.+.+..|..|+++|.|+||||+.+|+.|.+.++
T Consensus       162 i~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~G~~v~~~aa  241 (476)
T cd07142         162 VGPALACGNTIVLKPAEQTPLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLAA  241 (476)
T ss_pred             HHHHHHcCCEEEEECCCcccHHHHHHHHHHHHcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999988888999999999999999999999999999988


Q ss_pred             hCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCC
Q 012806          296 KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG  375 (456)
Q Consensus       296 ~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~  375 (456)
                      +.+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|++++.++++|+|++++
T Consensus       242 ~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~  321 (476)
T cd07142         242 KSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVGDPFRKG  321 (476)
T ss_pred             HcCCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence            54789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEcccccccc
Q 012806          376 VEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTS  454 (456)
Q Consensus       376 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~  454 (456)
                      +++||++++.+++++.++|++++++|+++++||...+..|+|++|||+.+++++|+++.+ +||||++|+.++|.+|+|+
T Consensus       322 ~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~  401 (476)
T cd07142         322 VEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDEVIK  401 (476)
T ss_pred             CcCCcCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCCCCCeeEccEEeecCCCCChhhhCCccCceEEEEeeCCHHHHHH
Confidence            999999999999999999999999999999999875567999999999999999977775 9999999999999999987


Q ss_pred             c
Q 012806          455 I  455 (456)
Q Consensus       455 ~  455 (456)
                      +
T Consensus       402 ~  402 (476)
T cd07142         402 R  402 (476)
T ss_pred             H
Confidence            5

Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde.

>cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L

Probab=100.00  E-value=8.2e-83  Score=663.69  Aligned_cols=398  Identities=42%  Similarity=0.746  Sum_probs=372.6

Q ss_pred             cCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 012806           58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME  137 (456)
Q Consensus        58 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~  137 (456)
                      .++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+.+.|+.++..+|.++|+++++.|+++++
T Consensus         6 ~~~~I~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~   85 (486)
T cd07140           6 HQLFINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMNARDRGRLMYRLADLMEEHQE   85 (486)
T ss_pred             cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCchhcCCHHHHHHHHHHHHHHHHHhHH
Confidence            36899999997667889999999999999999999999999999999999985569999999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCC----CCcceEEEeeccceEEEEccCCchHHHHH
Q 012806          138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD----GNYHIQTLHEPIGVAGQIVPWNFPLLLFT  213 (456)
Q Consensus       138 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~  213 (456)
                      +|++++++|+|||..++...|+..+++.++||+.+.++..+...+..    ++...+..++|+|||++|+|||||+...+
T Consensus        86 ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~r~P~GVv~~I~PwN~P~~~~~  165 (486)
T cd07140          86 ELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLA  165 (486)
T ss_pred             HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEeeccceEEEEcCCchHHHHHH
Confidence            99999999999999998656999999999999999887766554321    22346788999999999999999999999


Q ss_pred             hHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHH
Q 012806          214 WKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQEL  293 (456)
Q Consensus       214 ~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~  293 (456)
                      +++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+|+|++.+++..|..|++|++|+||||+.+|+.|.+.
T Consensus       166 ~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~  245 (486)
T cd07140         166 WKMAACLAAGNTVVLKPAQVTPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMKS  245 (486)
T ss_pred             HHHHHHHHhCCEEEEECCccCcHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999888889999999999999999999999999999


Q ss_pred             HhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCC
Q 012806          294 AAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFK  373 (456)
Q Consensus       294 ~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~  373 (456)
                      ++..+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|++
T Consensus       246 aa~~~l~~v~lElGGk~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~i~~~f~~~l~~~~~~l~~g~p~~  325 (486)
T cd07140         246 CAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHDEFVRRVVEEVKKMKIGDPLD  325 (486)
T ss_pred             HHhcCCCeEEEEcCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhCCccCCCC
Confidence            88547899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEc--ccc
Q 012806          374 SGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILC--VVT  450 (456)
Q Consensus       374 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~--~~~  450 (456)
                      +++++||++++++++++.++|++++++|+++++||.+.+..|+|++|||+.+++++|+++.+ +||||++|+.++  +.+
T Consensus       326 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~  405 (486)
T cd07140         326 RSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGDVD  405 (486)
T ss_pred             CCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeECCEEEeCCCCCChhhhCCCCCCeEEEEEcCCCCHH
Confidence            99999999999999999999999999999999999765557899999999999999977775 999999999998  588


Q ss_pred             ccccc
Q 012806          451 DCTSI  455 (456)
Q Consensus       451 eai~~  455 (456)
                      |+|++
T Consensus       406 eai~~  410 (486)
T cd07140         406 GVLQR  410 (486)
T ss_pred             HHHHH
Confidence            99864

10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids.

>PLN02278 succinic semialdehyde dehydrogenase

Probab=100.00  E-value=1.9e-82  Score=663.29  Aligned_cols=397  Identities=42%  Similarity=0.669  Sum_probs=374.1

Q ss_pred             CCccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 012806           55 ISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK  134 (456)
Q Consensus        55 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~  134 (456)
                      +...++||||+|+.+.++.+++++||.||+++++++.++.+|+++++++|++||+  .|+.++.++|.++|.++++.|++
T Consensus        22 ~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~   99 (498)
T PLN02278         22 LLRTQGLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFP--SWSKLTASERSKILRRWYDLIIA   99 (498)
T ss_pred             CCcccceECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHH
Confidence            4446799999998766678999999999999999999999999999999999999  89999999999999999999999


Q ss_pred             hHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCC-CCcceEEEeeccceEEEEccCCchHHHHH
Q 012806          135 NMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFT  213 (456)
Q Consensus       135 ~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~  213 (456)
                      +.++|++++++|+|||..+++ .|+..+++.++||+....+..+...+.. .+...++.++|+|||++|+|||||+.+.+
T Consensus       100 ~~~~la~~~~~e~Gk~~~~a~-~Ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~  178 (498)
T PLN02278        100 NKEDLAQLMTLEQGKPLKEAI-GEVAYGASFLEYFAEEAKRVYGDIIPSPFPDRRLLVLKQPVGVVGAITPWNFPLAMIT  178 (498)
T ss_pred             hHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEeecccEEEEECCCccHHHHHH
Confidence            999999999999999999997 5999999999999999887766544322 23456788999999999999999999999


Q ss_pred             hHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHH
Q 012806          214 WKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQEL  293 (456)
Q Consensus       214 ~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~  293 (456)
                      +++++||++||+||+|||+.+|+++..+.++|.++|+|+|++++|+|++.+.++.|+.|+++|+|+||||+.+|+.|.+.
T Consensus       179 ~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~l~eaglP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~  258 (498)
T PLN02278        179 RKVGPALAAGCTVVVKPSELTPLTALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAG  258 (498)
T ss_pred             HHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCChhhHHHHhcCCCcCEEEEECcHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999877888999999999999999999999999999


Q ss_pred             HhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCC
Q 012806          294 AAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFK  373 (456)
Q Consensus       294 ~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~  373 (456)
                      +++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++|++|+++|+++++++++|+|++
T Consensus       259 aa~-~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~  337 (498)
T PLN02278        259 AAA-TVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFAEAFSKAVQKLVVGDGFE  337 (498)
T ss_pred             Hhh-cCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHhccCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence            987 8999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEcccccc
Q 012806          374 SGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDC  452 (456)
Q Consensus       374 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~ea  452 (456)
                      +++++||++++.+++++.++|++++++|+++++||.....+|+|++|||+.+++++|+.+.+ +||||++|+.++|.+|+
T Consensus       338 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~~E~FGPVl~v~~~~~~dea  417 (498)
T PLN02278        338 EGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEA  417 (498)
T ss_pred             CCCcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCceEeeEEEecCCCCChhhhCCCcCCEEEEEeeCCHHHH
Confidence            99999999999999999999999999999999999765446899999999999999977775 99999999999999999


Q ss_pred             ccc
Q 012806          453 TSI  455 (456)
Q Consensus       453 i~~  455 (456)
                      |++
T Consensus       418 i~~  420 (498)
T PLN02278        418 IAI  420 (498)
T ss_pred             HHH
Confidence            975

>TIGR03374 ABALDH 1-pyrroline dehydrogenase

Probab=100.00  E-value=1.6e-82  Score=659.75  Aligned_cols=393  Identities=36%  Similarity=0.610  Sum_probs=368.1

Q ss_pred             cCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 012806           58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME  137 (456)
Q Consensus        58 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~  137 (456)
                      .++||||+|+.+ ++.+++++||.||+++++++.++.+|+++++++|++||+  .|+.++.++|.++|+++++.|+++++
T Consensus         2 ~~~~i~g~~~~~-~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~   78 (472)
T TIGR03374         2 HKLLINGELVSG-EGEKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFA--EWGQTTPKARAECLLKLADVIEENAQ   78 (472)
T ss_pred             CCceECCEEecC-CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence            478999999864 578899999999999999999999999999999999999  89999999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCC-CCCcceEEEeeccceEEEEccCCchHHHHHhHH
Q 012806          138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKV  216 (456)
Q Consensus       138 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~  216 (456)
                      +|++++++|+|||..++...|+..+++.++||++....+.+...+. ..+...++.++|+|||++|+|||||+.++++++
T Consensus        79 ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~  158 (472)
T TIGR03374        79 VFAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKL  158 (472)
T ss_pred             HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCccCCCceEEEEEecceEEEEECCCCchHHHHHHHH
Confidence            9999999999999998865699999999999998877665542221 123456889999999999999999999999999


Q ss_pred             HHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhh
Q 012806          217 APALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK  296 (456)
Q Consensus       217 ~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~  296 (456)
                      ++||++||+||+|||+.+|+++..+++++.++ +|+|++|+++|++.+++..|+.|+++|+|+||||+++|+.|++.++.
T Consensus       159 ~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~  237 (472)
T TIGR03374       159 APALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAP  237 (472)
T ss_pred             HHHHhcCCEEEecCCCCCCHHHHHHHHHHHHh-CCcCeEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhh
Confidence            99999999999999999999999999999985 99999999999888899999999999999999999999999999988


Q ss_pred             CCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCC
Q 012806          297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGV  376 (456)
Q Consensus       297 ~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~  376 (456)
                       ++||+++|+|||||+||++|||+|.|++.+++++|+|+||.|++++|||||++++|+|+++|+++++++++|+|+++++
T Consensus       238 -~~~~~~lElGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~  316 (472)
T TIGR03374       238 -SIKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVEKLGAAVATLKSGAPDDEST  316 (472)
T ss_pred             -cccceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCccccCCEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCCC
Confidence             8999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCHHHHHHHHHHHHHHHHcC-CeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEcccccccc
Q 012806          377 EQGPQIDPEQFQKVLRYIRSGIESN-ATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTS  454 (456)
Q Consensus       377 ~~Gpli~~~~~~~v~~~i~~a~~~G-a~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~  454 (456)
                      ++||++++.+++++.++|++++++| +++++||....+.|+|++|||+.+++++|+++.+ +||||++|+.|++.+|+|+
T Consensus       317 ~~Gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~  396 (472)
T TIGR03374       317 ELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVN  396 (472)
T ss_pred             cCCCCCCHHHHHHHHHHHHHHHHcCCeEEEeCCccCCCCCeEEeeEEEeCCCCCChhhhCCccCceEEEEEECCHHHHHH
Confidence            9999999999999999999999999 7999999765456899999999999999977775 9999999999999999997


Q ss_pred             c
Q 012806          455 I  455 (456)
Q Consensus       455 ~  455 (456)
                      +
T Consensus       397 ~  397 (472)
T TIGR03374       397 W  397 (472)
T ss_pred             H
Confidence            5

Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family.

>cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like

Probab=100.00  E-value=4.3e-82  Score=659.22  Aligned_cols=393  Identities=43%  Similarity=0.645  Sum_probs=368.6

Q ss_pred             ceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 012806           60 NLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEEL  139 (456)
Q Consensus        60 ~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l  139 (456)
                      +||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+. .|++++..+|.++|+++++.|++++++|
T Consensus         2 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~-~w~~~~~~~R~~~L~~~a~~l~~~~~el   80 (477)
T cd07113           2 HFIDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFVS-AWAKTTPAERGRILLRLADLIEQHGEEL   80 (477)
T ss_pred             CeECCEEecCCCCCeEeeeCCCCCCEEEEEcCCCHHHHHHHHHHHHHHhHh-hhccCCHHHHHHHHHHHHHHHHHCHHHH
Confidence            689999987666788999999999999999999999999999999999972 3999999999999999999999999999


Q ss_pred             HHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCC------CCCcceEEEeeccceEEEEccCCchHHHHH
Q 012806          140 AALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG------DGNYHIQTLHEPIGVAGQIVPWNFPLLLFT  213 (456)
Q Consensus       140 a~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~------~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~  213 (456)
                      ++++++|+|||..+++..|+..+++.++|+++++.+..+...+.      ..+...+..++|+|||++|+|||||+.+.+
T Consensus        81 a~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~  160 (477)
T cd07113          81 AQLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAV  160 (477)
T ss_pred             HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccCCCceEEEEEeecceEEEEcCCChHHHHHH
Confidence            99999999999999874599999999999999887766554321      112356788999999999999999999999


Q ss_pred             hHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHH
Q 012806          214 WKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQEL  293 (456)
Q Consensus       214 ~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~  293 (456)
                      +++++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+++|++. .+..|+.|+++|+|+||||+.+|+.|.+.
T Consensus       161 ~~i~~ALaaGN~VvlKPs~~tp~~~~~l~~~~~~aglP~gvv~~v~g~~~-~~~~L~~~~~v~~V~fTGS~~~G~~i~~~  239 (477)
T cd07113         161 WKIGAALATGCTIVIKPSEFTPLTLLRVAELAKEAGIPDGVLNVVNGKGA-VGAQLISHPDVAKVSFTGSVATGKKIGRQ  239 (477)
T ss_pred             HHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCcCCCcEEEEecCch-HHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999776 88999999999999999999999999999


Q ss_pred             HhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCC
Q 012806          294 AAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFK  373 (456)
Q Consensus       294 ~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~  373 (456)
                      +++ +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|
T Consensus       240 aa~-~~~~~~lElGGkn~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~  318 (477)
T cd07113         240 AAS-DLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDELVTKLKQALSSFQVGSPMD  318 (477)
T ss_pred             HHh-hcCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCcCCcEEEECHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            988 8999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEcccccc
Q 012806          374 SGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDC  452 (456)
Q Consensus       374 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~ea  452 (456)
                      +++++||++++++++++.++|++++++|+++++||.+..++|+|++|||+.+++++|+.+.+ +||||++|+.++|.+|+
T Consensus       319 ~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~dea  398 (477)
T cd07113         319 ESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEEL  398 (477)
T ss_pred             CCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeEeCEEEecCCCCChHHhCCCCCCeEEEEEeCCHHHH
Confidence            99999999999999999999999999999999999765456999999999999999977775 99999999999999999


Q ss_pred             ccc
Q 012806          453 TSI  455 (456)
Q Consensus       453 i~~  455 (456)
                      |++
T Consensus       399 i~~  401 (477)
T cd07113         399 IQL  401 (477)
T ss_pred             HHH
Confidence            875

NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate.

>PLN02315 aldehyde dehydrogenase family 7 member

Probab=100.00  E-value=6.8e-82  Score=658.35  Aligned_cols=394  Identities=25%  Similarity=0.475  Sum_probs=367.8

Q ss_pred             CCCccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 012806           54 QISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIE  133 (456)
Q Consensus        54 ~~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~  133 (456)
                      .+...++||||+|+.  ++++++++||.||+++++++.++.+|+++|+++|++||+  .|++++..+|.++|+++++.|+
T Consensus        17 ~~~~~~~~I~G~~~~--~~~~~~~~nP~t~~~i~~~~~a~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~   92 (508)
T PLN02315         17 SSRNLGCYVGGEWRA--NGPLVSSVNPANNQPIAEVVEASLEDYEEGLRACEEAAK--IWMQVPAPKRGEIVRQIGDALR   92 (508)
T ss_pred             CccccCceECCEEec--CCCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHH
Confidence            344557899999985  467899999999999999999999999999999999999  9999999999999999999999


Q ss_pred             HhHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCC-CCcceEEEeeccceEEEEccCCchHHHH
Q 012806          134 KNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLF  212 (456)
Q Consensus       134 ~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~  212 (456)
                      ++.++|++++++|+|||..+++ .|+..+++.++||++.++++.+...+.. .+...+..++|+|||++|+|||||+.++
T Consensus        93 ~~~~~la~~~~~e~GK~~~~a~-~ev~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~  171 (508)
T PLN02315         93 AKLDYLGRLVSLEMGKILAEGI-GEVQEIIDMCDFAVGLSRQLNGSIIPSERPNHMMMEVWNPLGIVGVITAFNFPCAVL  171 (508)
T ss_pred             hHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceEEEEECCCcchHHHH
Confidence            9999999999999999999997 6999999999999998877766544422 2344577899999999999999999999


Q ss_pred             HhHHHHHhhcCCEEEEecCCCchHHHHH----HHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHH
Q 012806          213 TWKVAPALTCGNTIVLKSAEQTPLTALY----VAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGK  288 (456)
Q Consensus       213 ~~~~~~ALaaGN~vvlKps~~~p~~~~~----l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~  288 (456)
                      ++++++||++||+||+|||+.+|+++..    +.++|.++|+|+|++|+++| +.+.+..|..|+++++|.||||+.+|+
T Consensus       172 ~~~~~~ALaaGN~VVlKPs~~tp~~~~~~~~l~~~~~~~aGlP~gvv~~v~g-~~~~~~~l~~~~~v~~v~fTGS~~~G~  250 (508)
T PLN02315        172 GWNACIALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCG-GAEIGEAIAKDTRIPLVSFTGSSKVGL  250 (508)
T ss_pred             HHHHhHHHHcCCEEEeeCCCcChHHHHHHHHHHHHHHHHcCCCcccEEEecC-ChHHHHHHhcCCCCCEEEEECCHHHHH
Confidence            9999999999999999999999999887    67788999999999999998 778899999999999999999999999


Q ss_pred             HHHHHHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhc
Q 012806          289 IVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIV  368 (456)
Q Consensus       289 ~i~~~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~  368 (456)
                      .|.+.++. +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++
T Consensus       251 ~v~~~aa~-~~~~~~lElgGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~v  329 (508)
T PLN02315        251 MVQQTVNA-RFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLEQLLTVYKQVKI  329 (508)
T ss_pred             HHHHHHHh-cCCCEEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhcCC
Confidence            99998887 88999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEc
Q 012806          369 GDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILC  447 (456)
Q Consensus       369 g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~  447 (456)
                      |||+++++++||+++..+++++.++|++++++|+++++||...+.+|+|++|||+ +++++|+.+.+ +||||++|+.++
T Consensus       330 G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl-~v~~~~~i~~eE~FGPVl~V~~~~  408 (508)
T PLN02315        330 GDPLEKGTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIESEGNFVQPTIV-EISPDADVVKEELFGPVLYVMKFK  408 (508)
T ss_pred             CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEecEEE-ecCCCChHHhCCCcCCEEEEEEeC
Confidence            9999999999999999999999999999999999999999865557999999999 69999977775 999999999999


Q ss_pred             cccccccc
Q 012806          448 VVTDCTSI  455 (456)
Q Consensus       448 ~~~eai~~  455 (456)
                      +.+|+|++
T Consensus       409 ~~deai~~  416 (508)
T PLN02315        409 TLEEAIEI  416 (508)
T ss_pred             CHHHHHHH
Confidence            99999875

>cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like

Probab=100.00  E-value=1.1e-81  Score=656.75  Aligned_cols=402  Identities=57%  Similarity=0.993  Sum_probs=377.2

Q ss_pred             CCCccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccC-CCCCCCHHHHHHHHHHHHHHH
Q 012806           54 QISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLI  132 (456)
Q Consensus        54 ~~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~-~w~~~~~~~R~~iL~~~a~~l  132 (456)
                      .++.+++||||+|+.+.++.+++++||.||+++++++.++.+|++++++.|++||+.+ .|+.++.++|.++|+++++.|
T Consensus         3 ~~~~~~~~I~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~W~~~~~~~R~~~L~~~a~~l   82 (481)
T cd07141           3 EIKYTKIFINNEWHDSVSGKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKLGSPWRTMDASERGRLLNKLADLI   82 (481)
T ss_pred             ccccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhccCccccCCHHHHHHHHHHHHHHH
Confidence            4556789999999977678899999999999999999999999999999999999742 699999999999999999999


Q ss_pred             HHhHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHH
Q 012806          133 EKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLF  212 (456)
Q Consensus       133 ~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~  212 (456)
                      .++.++|++++++|+|||..++...|+..+++.+++++++.++..+...+..++...+..++|+|||++|+|||||+..+
T Consensus        83 ~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~  162 (481)
T cd07141          83 ERDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGKTIPMDGDFFTYTRHEPVGVCGQIIPWNFPLLMA  162 (481)
T ss_pred             HHhHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCceEEEEEeceeEEEEEccChhHHHHH
Confidence            99999999999999999997665569999999999999998888776554444456788999999999999999999999


Q ss_pred             HhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHH
Q 012806          213 TWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE  292 (456)
Q Consensus       213 ~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~  292 (456)
                      ++++++||++||+||+|||+.+|+++..++++|+++|+|+|++++|+|++.+.+..|..|+++|.|+||||+.+|+.|.+
T Consensus       163 ~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~  242 (481)
T cd07141         163 AWKLAPALACGNTVVLKPAEQTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQQ  242 (481)
T ss_pred             HHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999987788999999999999999999999999999


Q ss_pred             HHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCC
Q 012806          293 LAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPF  372 (456)
Q Consensus       293 ~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~  372 (456)
                      .++..++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+
T Consensus       243 ~aa~~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~  322 (481)
T cd07141         243 AAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIYDEFVKRSVERAKKRVVGNPF  322 (481)
T ss_pred             HhhhhcCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCC
Confidence            88754789999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccc
Q 012806          373 KSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTD  451 (456)
Q Consensus       373 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~e  451 (456)
                      |+++++||++++.+++++.++|++++++|+++++||+..++.|+|++|||+.+++++|+.+.+ +||||++|+.|++.+|
T Consensus       323 ~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~e  402 (481)
T cd07141         323 DPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTIDE  402 (481)
T ss_pred             CCCCCCcCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhccccCCeEEEEeeCCHHH
Confidence            999999999999999999999999999999999999875557899999999999999977776 9999999999999999


Q ss_pred             cccc
Q 012806          452 CTSI  455 (456)
Q Consensus       452 ai~~  455 (456)
                      +|++
T Consensus       403 ai~~  406 (481)
T cd07141         403 VIER  406 (481)
T ss_pred             HHHH
Confidence            9975

NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism.

>PLN02467 betaine aldehyde dehydrogenase

Probab=100.00  E-value=1.7e-81  Score=655.75  Aligned_cols=397  Identities=41%  Similarity=0.697  Sum_probs=372.6

Q ss_pred             CCccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhc-----ccCCCCCCCHHHHHHHHHHHH
Q 012806           55 ISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAF-----DEGPWPKMTPYERSRIMLRAA  129 (456)
Q Consensus        55 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~-----~~~~w~~~~~~~R~~iL~~~a  129 (456)
                      ....++||||+|+.+.++.+++++||.||+++++++.++.+|+++|+++|++||     +  .|++++..+|.++|++++
T Consensus         5 ~~~~~~~I~g~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~dv~~av~~A~~a~~~~~~~--~W~~~~~~~R~~~L~~~a   82 (503)
T PLN02467          5 VPRRQLFIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKAFKRNKGK--DWARTTGAVRAKYLRAIA   82 (503)
T ss_pred             cCccCceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcccc--hhhcCCHHHHHHHHHHHH
Confidence            334578999999977677899999999999999999999999999999999999     6  899999999999999999


Q ss_pred             HHHHHhHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCccc---CCC-CCcceEEEeeccceEEEEccC
Q 012806          130 DLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTV---PGD-GNYHIQTLHEPIGVAGQIVPW  205 (456)
Q Consensus       130 ~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~P~Gvv~~i~p~  205 (456)
                      +.|++++++|++++++|+|||..+++ .|+..+++.++||+.++.++.+...   ... .+...++.++|+|||++|+||
T Consensus        83 ~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~Pw  161 (503)
T PLN02467         83 AKITERKSELAKLETLDCGKPLDEAA-WDMDDVAGCFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPW  161 (503)
T ss_pred             HHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEecCceEEEECCC
Confidence            99999999999999999999999998 5999999999999999888765432   111 234568899999999999999


Q ss_pred             CchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChh
Q 012806          206 NFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCD  285 (456)
Q Consensus       206 N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~  285 (456)
                      |||+.+.++++++||++||+||+|||+.+|+++..++++++++|+|+|++|+++|++.+.++.|..|++++.|.||||+.
T Consensus       162 N~P~~~~~~~i~~ALaaGN~Vv~Kps~~tp~~~~~l~~~~~eag~P~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~  241 (503)
T PLN02467        162 NYPLLMATWKVAPALAAGCTAVLKPSELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTA  241 (503)
T ss_pred             ChHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHcCcCcCeEEEEeCCchhHHHHHhcCCCCCEEEEECCHH
Confidence            99999999999999999999999999999999999999999999999999999998888899999999999999999999


Q ss_pred             HHHHHHHHHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhh
Q 012806          286 TGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMR  365 (456)
Q Consensus       286 ~g~~i~~~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~  365 (456)
                      +|+.|.+.++. ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++
T Consensus       242 ~g~~v~~~aa~-~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~  320 (503)
T PLN02467        242 TGRKIMTAAAQ-MVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIASEFLEKLVKWAKN  320 (503)
T ss_pred             HHHHHHHHHhc-cCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhhcCCCCCCCcEEEEcHHHHHHHHHHHHHHHHh
Confidence            99999999987 89999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccC--CCCceEecEEEecCCCChHhhhc-cccceEE
Q 012806          366 RIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG--NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFS  442 (456)
Q Consensus       366 ~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~--~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~  442 (456)
                      +++|||.|+++++||++++.+++++.++|++++.+|+++++||....  ..|+|++|||+.+++++|+.+.+ +||||++
T Consensus       321 l~~g~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~  400 (503)
T PLN02467        321 IKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLC  400 (503)
T ss_pred             cCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCeEEeeEEEeCCCCCChHhhCCCCCceEE
Confidence            99999999999999999999999999999999999999999997532  36899999999999999977775 9999999


Q ss_pred             eEEEccccccccc
Q 012806          443 FIILCVVTDCTSI  455 (456)
Q Consensus       443 vv~~~~~~eai~~  455 (456)
                      |+.+++.+|+|++
T Consensus       401 v~~~~~~~eAi~~  413 (503)
T PLN02467        401 VKTFSTEDEAIEL  413 (503)
T ss_pred             EEeeCCHHHHHHH
Confidence            9999999999975

>PRK13252 betaine aldehyde dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-81  Score=657.95  Aligned_cols=396  Identities=42%  Similarity=0.701  Sum_probs=372.4

Q ss_pred             CccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 012806           56 SYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKN  135 (456)
Q Consensus        56 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~  135 (456)
                      ...++||||+|+...++++++++||.||+++++++.++.+|+++++++|++|++  .|+.++.++|.++|+++++.|+++
T Consensus         5 ~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~   82 (488)
T PRK13252          5 PLQSLYIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQK--IWAAMTAMERSRILRRAVDILRER   82 (488)
T ss_pred             ccccccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHh
Confidence            345789999999766788999999999999999999999999999999999999  999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhH
Q 012806          136 MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWK  215 (456)
Q Consensus       136 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~  215 (456)
                      +++|++++++|+|||..+++..|+..+++.++|+++..+...+...+...+...+..++|+|||++|+|||||+.+.+++
T Consensus        83 ~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~PlGVv~~I~p~N~P~~~~~~~  162 (488)
T PRK13252         83 NDELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEGEQIPLRGGSFVYTRREPLGVCAGIGAWNYPIQIACWK  162 (488)
T ss_pred             HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCCCceEEEEEeeeeEEEEECCCchHHHHHHHH
Confidence            99999999999999999987569999999999999988776665444333445688899999999999999999999999


Q ss_pred             HHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHh
Q 012806          216 VAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA  295 (456)
Q Consensus       216 ~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a  295 (456)
                      +++||++||+||+|||+.+|+++..++++|+++|+|+|++|+|+|++. .++.|+.|+++|+|+||||+.+|+.|.+.++
T Consensus       163 ~~~ALaaGN~Vv~Kps~~~p~t~~~l~~~~~~aglP~g~v~~v~g~~~-~~~~L~~~~~vd~V~fTGS~~~g~~i~~~aa  241 (488)
T PRK13252        163 SAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDGVFNVVQGDGR-VGAWLTEHPDIAKVSFTGGVPTGKKVMAAAA  241 (488)
T ss_pred             HHHHHhcCCeEEEeCCccCcHHHHHHHHHHHHcCcCcccEEEEecCcH-HHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999999765 8899999999999999999999999999988


Q ss_pred             hCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCC
Q 012806          296 KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG  375 (456)
Q Consensus       296 ~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~  375 (456)
                      . +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.+++
T Consensus       242 ~-~l~~~~lElgG~~p~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~  320 (488)
T PRK13252        242 A-SLKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEARLLERVERIRIGDPMDPA  320 (488)
T ss_pred             h-cCCcEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence            8 799999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccC----CCCceEecEEEecCCCChHhhhc-cccceEEeEEEcccc
Q 012806          376 VEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG----NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVT  450 (456)
Q Consensus       376 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~----~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~  450 (456)
                      +++||++++++++++.++|++++++|+++++||.+..    ..|+|++|||+.+++++|+.+.+ +||||++|+.+++.+
T Consensus       321 ~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~  400 (488)
T PRK13252        321 TNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDED  400 (488)
T ss_pred             CcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCeEEccEEeccCCCCChHhhCCCCCceEEEEeeCCHH
Confidence            9999999999999999999999999999999996532    35999999999999999977775 999999999999999


Q ss_pred             ccccc
Q 012806          451 DCTSI  455 (456)
Q Consensus       451 eai~~  455 (456)
                      |+|++
T Consensus       401 eai~~  405 (488)
T PRK13252        401 EVIAR  405 (488)
T ss_pred             HHHHH
Confidence            99975

>cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like

Probab=100.00  E-value=3e-81  Score=651.21  Aligned_cols=393  Identities=40%  Similarity=0.711  Sum_probs=370.2

Q ss_pred             CceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 012806           59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEE  138 (456)
Q Consensus        59 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~  138 (456)
                      .+||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+  .|+.++.++|.++|+++++.|++++++
T Consensus         2 ~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~   79 (475)
T cd07117           2 GLFINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFK--TWRKTTVAERANILNKIADIIDENKEL   79 (475)
T ss_pred             CceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHH
Confidence            479999999776778999999999999999999999999999999999999  999999999999999999999999999


Q ss_pred             HHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHH
Q 012806          139 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAP  218 (456)
Q Consensus       139 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~  218 (456)
                      |++++++|+|||+.+++..|+..+++.++||+..+.+..+...+...+...+..++|+|||++|+|||||+.++++++++
T Consensus        80 la~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~Pl~~~~~~i~~  159 (475)
T cd07117          80 LAMVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGSANMIDEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAP  159 (475)
T ss_pred             HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCceeEEEEeecceEEEECCCccHHHHHHHHHHH
Confidence            99999999999999987569999999999999888766655443333445688999999999999999999999999999


Q ss_pred             HhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCC
Q 012806          219 ALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN  298 (456)
Q Consensus       219 ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~  298 (456)
                      ||++||+||+|||+.+|+++..++++++++ +|+|++|+|+|++.+.+..|+.|+++|.|+||||+.+|+.|.+.+++ +
T Consensus       160 AL~aGN~VvlKPs~~~p~~~~~l~~~~~~~-lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~-~  237 (475)
T cd07117         160 ALAAGNTVVIKPSSTTSLSLLELAKIIQDV-LPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAAK-K  237 (475)
T ss_pred             HHHcCCEEEEECCccCcHHHHHHHHHHHHh-CCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc-c
Confidence            999999999999999999999999999985 99999999999888889999999999999999999999999999888 8


Q ss_pred             CccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCcc
Q 012806          299 LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQ  378 (456)
Q Consensus       299 ~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~  378 (456)
                      ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+++++++
T Consensus       238 ~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~  317 (475)
T cd07117         238 LIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNPLDPDTQM  317 (475)
T ss_pred             CCcEEEeCCCCCeEEECCCCChHHHHHHHHHHHhhccCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccC----CCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccc
Q 012806          379 GPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG----NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCT  453 (456)
Q Consensus       379 Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~----~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai  453 (456)
                      ||++++++++++.++|++++++|+++++||....    ++|+|++|||+.+++++|+.+.+ +||||++|+.++|.+|+|
T Consensus       318 gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai  397 (475)
T cd07117         318 GAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDEVI  397 (475)
T ss_pred             cCcCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCeEEeeEEeecCCCCChhhhCCCcCCeEEEEEECCHHHHH
Confidence            9999999999999999999999999999997632    36899999999999999977775 999999999999999998


Q ss_pred             cc
Q 012806          454 SI  455 (456)
Q Consensus       454 ~~  455 (456)
                      ++
T Consensus       398 ~~  399 (475)
T cd07117         398 DM  399 (475)
T ss_pred             HH
Confidence            75

Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD.

>cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like

Probab=100.00  E-value=3.4e-81  Score=652.05  Aligned_cols=393  Identities=41%  Similarity=0.726  Sum_probs=372.0

Q ss_pred             CceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 012806           59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEE  138 (456)
Q Consensus        59 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~  138 (456)
                      ++||||+|+.+.++++++++||.||+++++++.++.+|++.++++|++||+  .|+.++.++|.++|+++++.|++++++
T Consensus         2 ~~~I~g~~~~~~~~~~~~v~~P~t~~~~~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~   79 (480)
T cd07559           2 DNFINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFK--TWGKTSVAERANILNKIADRIEENLEL   79 (480)
T ss_pred             CccCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence            579999999776788999999999999999999999999999999999999  999999999999999999999999999


Q ss_pred             HHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHH
Q 012806          139 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAP  218 (456)
Q Consensus       139 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~  218 (456)
                      |++++++|+|||..+++..|+..+++.++||++...+..+...+.+.+...+..++|+|||++|+|||||+.+.++++++
T Consensus        80 la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~  159 (480)
T cd07559          80 LAVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEGSLSEIDEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAP  159 (480)
T ss_pred             HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHHHHH
Confidence            99999999999999987569999999999999988776665544444556788999999999999999999999999999


Q ss_pred             HhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCC
Q 012806          219 ALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN  298 (456)
Q Consensus       219 ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~  298 (456)
                      ||++||+||+|||+.+|+++..+++++.++ +|+|++|+++|++.+.++.|+.|++++.|+||||+.+|+.|.+.+++ +
T Consensus       160 ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~-~  237 (480)
T cd07559         160 ALAAGNTVVLKPASQTPLSILVLMELIGDL-LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAAE-N  237 (480)
T ss_pred             HHHcCCEEEEECchhhhHHHHHHHHHHHHh-CCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc-c
Confidence            999999999999999999999999999996 99999999999888899999999999999999999999999999988 8


Q ss_pred             CccEEEecCCCCceEEcCCC-----CHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCC
Q 012806          299 LKPVTLELGGKSPFIIFDDA-----DVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFK  373 (456)
Q Consensus       299 ~~~v~lelgG~~~~iV~~da-----D~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~  373 (456)
                      ++|+++|+|||+|+||++||     |+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+|
T Consensus       238 ~~p~~lElGGk~p~iV~~dA~~~~~Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~  317 (480)
T cd07559         238 LIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYDEFIERAVERFEAIKVGNPLD  317 (480)
T ss_pred             CCcEEeccCCCCeEEEcCCccccccCHHHHHHHHHHHHHhhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            99999999999999999999     9999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccC----CCCceEecEEEecCCCChHhhhc-cccceEEeEEEcc
Q 012806          374 SGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG----NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCV  448 (456)
Q Consensus       374 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~----~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~  448 (456)
                      +++++||++++++++++.++|++++++||++++||.+..    ..|+|++|||+.+++++|+.+.+ +||||++|+.++|
T Consensus       318 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~  397 (480)
T cd07559         318 PETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKD  397 (480)
T ss_pred             CCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcHHhcCCcCceEEEEeeCC
Confidence            999999999999999999999999999999999997643    46999999999999999977775 9999999999999


Q ss_pred             ccccccc
Q 012806          449 VTDCTSI  455 (456)
Q Consensus       449 ~~eai~~  455 (456)
                      .+|+|++
T Consensus       398 ~~eai~~  404 (480)
T cd07559         398 EEEAIAI  404 (480)
T ss_pred             HHHHHHH
Confidence            9999875

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences.

>cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like

Probab=100.00  E-value=7.5e-81  Score=649.20  Aligned_cols=397  Identities=49%  Similarity=0.858  Sum_probs=371.7

Q ss_pred             cCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCC-CCCHHHHHHHHHHHHHHHHHhH
Q 012806           58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWP-KMTPYERSRIMLRAADLIEKNM  136 (456)
Q Consensus        58 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~-~~~~~~R~~iL~~~a~~l~~~~  136 (456)
                      .++||||+|+.+.++.+++++||.||+++++++.++.+|++.++++|++||+. .|+ .++.++|.++|+++++.|++++
T Consensus         7 ~~~~I~G~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~~-~W~~~~~~~~R~~~L~~~a~~l~~~~   85 (481)
T cd07143           7 TGLFINGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAFET-DWGLKVSGSKRGRCLSKLADLMERNL   85 (481)
T ss_pred             cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhhhh-hhcccCCHHHHHHHHHHHHHHHHHhH
Confidence            46899999997766788999999999999999999999999999999999972 499 9999999999999999999999


Q ss_pred             HHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHH
Q 012806          137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKV  216 (456)
Q Consensus       137 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~  216 (456)
                      ++|++++++|+|||..+....|+..+++.+++++.++++..+...+...+...+..++|+|||++|+|||||+.++++++
T Consensus        86 ~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~a~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~  165 (481)
T cd07143          86 DYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQVIETDIKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKI  165 (481)
T ss_pred             HHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceEEEEEecceeEEEECCCcChHHHHHHHH
Confidence            99999999999999976554699999999999999998776654433334456788999999999999999999999999


Q ss_pred             HHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhh
Q 012806          217 APALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK  296 (456)
Q Consensus       217 ~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~  296 (456)
                      ++||++||+||+|||+.+|+++..+.+++.++|+|+|++++++|++.+.++.|..|+++|.|+||||+.+|+.|.+.++.
T Consensus       166 ~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~G~~i~~~aa~  245 (481)
T cd07143         166 APALAAGNTIVLKPSELTPLSALYMTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAK  245 (481)
T ss_pred             HHHHHcCCEEEEeCCCCCcHHHHHHHHHHHhcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999877889999999999999999999999999998885


Q ss_pred             CCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCC
Q 012806          297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGV  376 (456)
Q Consensus       297 ~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~  376 (456)
                      .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++
T Consensus       246 ~~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~naGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~  325 (481)
T cd07143         246 SNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKVGDPFAEDT  325 (481)
T ss_pred             hcCCEEEeecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence            47899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          377 EQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       377 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      ++||++++.+++++.++|++++++|+++++||....+.|+|++|||+.+++++|+.+.+ +||||++|+.+++.+|+|++
T Consensus       326 ~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~  405 (481)
T cd07143         326 FQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEEAIKR  405 (481)
T ss_pred             CCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCceEEeeEEEecCCCCChhhhcCCcCCeEEEEeeCCHHHHHHH
Confidence            99999999999999999999999999999999875557899999999999999977775 99999999999999999875

NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD.

>TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase

Probab=100.00  E-value=8.7e-81  Score=650.02  Aligned_cols=392  Identities=38%  Similarity=0.609  Sum_probs=366.8

Q ss_pred             CceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCC-CCCCCHHHHHHHHHHHHHHHHHhHH
Q 012806           59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGP-WPKMTPYERSRIMLRAADLIEKNME  137 (456)
Q Consensus        59 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~-w~~~~~~~R~~iL~~~a~~l~~~~~  137 (456)
                      ++||||+|+.  ++++++++||.||+++++++.++.+|++.++++|++||+  . |+.++.++|.++|+++++.|+++.+
T Consensus         2 ~~~i~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~~w~~~~~~~R~~~L~~~a~~l~~~~~   77 (481)
T TIGR03216         2 RNFINGAFVE--SGKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAALK--GPWGKMTVAERADLLYAVADEIERRFD   77 (481)
T ss_pred             CceECCEEec--CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhH--hhHhhCCHHHHHHHHHHHHHHHHHhHH
Confidence            5799999985  678999999999999999999999999999999999998  7 9999999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCC----CCCcceEEEeeccceEEEEccCCchHHHHH
Q 012806          138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG----DGNYHIQTLHEPIGVAGQIVPWNFPLLLFT  213 (456)
Q Consensus       138 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~  213 (456)
                      +|++++++|+|||..++...|+..+++.+++|+....+..+...+.    ..+...+..++|+|||++|+|||||+.+.+
T Consensus        78 ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~Pl~~~~  157 (481)
T TIGR03216        78 DFLAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTECFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMT  157 (481)
T ss_pred             HHHHHHHHHcCCcHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEeccceEEEECCCCcHHHHHH
Confidence            9999999999999998864699999999999999887665544321    113456788999999999999999999999


Q ss_pred             hHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCch-hhHHHHhcCCCccEEEEecChhHHHHHHH
Q 012806          214 WKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGP-TAGAALASHMDVDKLSFTGHCDTGKIVQE  292 (456)
Q Consensus       214 ~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~  292 (456)
                      +++++||++||+||+|||+.+|+++..+.+++.++|+|+|++++++|++. +.++.|..|+++|.|+||||+.+|+.|.+
T Consensus       158 ~~~~~ALaaGN~vvlKPs~~tp~t~~~l~~l~~~aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~fTGS~~~G~~i~~  237 (481)
T TIGR03216       158 WKVGPALACGNTVVVKPSEETPGTATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMK  237 (481)
T ss_pred             HHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCCCcCceEEEecCChhHHHHHHhcCCCCCEEEEECCHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999998665 58899999999999999999999999999


Q ss_pred             HHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCC
Q 012806          293 LAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPF  372 (456)
Q Consensus       293 ~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~  372 (456)
                      .+++ +++|+++|+||+||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.
T Consensus       238 ~aa~-~~~~~~lElgG~n~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~  316 (481)
T TIGR03216       238 AAAD-GVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFVAALKARAESLKIGVPD  316 (481)
T ss_pred             HHhc-CCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCC
Confidence            9988 899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccC-----CCCceEecEEEecCCCChHhhhc-cccceEEeEEE
Q 012806          373 KSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG-----NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIIL  446 (456)
Q Consensus       373 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~-----~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~  446 (456)
                      ++++++||++++.+++++.++|++++++|+++++||....     .+|+|++|||+.+++++|+.+.+ +||||++|+.+
T Consensus       317 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FgPvl~V~~~  396 (481)
T TIGR03216       317 DPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPF  396 (481)
T ss_pred             CCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcccccccCCCCceEccEEEeCCCCCCHHHhCCCCCceEEEEEe
Confidence            9999999999999999999999999999999999997532     36999999999999999977775 99999999999


Q ss_pred             ccccccccc
Q 012806          447 CVVTDCTSI  455 (456)
Q Consensus       447 ~~~~eai~~  455 (456)
                      +|.+|+|++
T Consensus       397 ~~~~eai~~  405 (481)
T TIGR03216       397 DSEEEVIAL  405 (481)
T ss_pred             CCHHHHHHH
Confidence            999999875

Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation.

>cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17

Probab=100.00  E-value=2.6e-80  Score=650.24  Aligned_cols=392  Identities=28%  Similarity=0.403  Sum_probs=364.8

Q ss_pred             cCceeCCEEeeCCCCCeeeeecCCC-CceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH-h
Q 012806           58 TKNLINGQFVDAASGKTFPVYDPRT-AEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK-N  135 (456)
Q Consensus        58 ~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~-~  135 (456)
                      .++||||+|+.  ++.+++++||+| |+++++++.++.+|++++|++|++||+  .|++++..+|.++|+++++.|++ +
T Consensus        33 ~~~~i~G~~~~--~~~~~~v~~P~~tg~~l~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~  108 (522)
T cd07123          33 IPLVIGGKEVR--TGNTGKQVMPHDHAHVLATYHYADAALVEKAIEAALEARK--EWARMPFEDRAAIFLKAADLLSGKY  108 (522)
T ss_pred             cCeeECCEEcC--CCCeEEEECCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhhC
Confidence            47899999985  467899999995 999999999999999999999999999  89999999999999999999996 8


Q ss_pred             HHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCC-CCCcceEEEeecc-ceEEEEccCCchHHHHH
Q 012806          136 MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEPI-GVAGQIVPWNFPLLLFT  213 (456)
Q Consensus       136 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~-Gvv~~i~p~N~P~~~~~  213 (456)
                      +++|+.++++|+|||..++...|+..+++.++||+.++.+..+...+. ..+...++.++|+ |||++|+|||||+....
T Consensus       109 ~~ela~~~~~e~Gk~~~~a~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwNfP~~~~~  188 (522)
T cd07123         109 RYELNAATMLGQGKNVWQAEIDAACELIDFLRFNVKYAEELYAQQPLSSPAGVWNRLEYRPLEGFVYAVSPFNFTAIGGN  188 (522)
T ss_pred             HHHHHHHHHHhcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCceEEEECCcccHHHHHH
Confidence            999999999999999998865689999999999999888776544322 2244578899998 99999999999999999


Q ss_pred             hHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHH
Q 012806          214 WKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQEL  293 (456)
Q Consensus       214 ~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~  293 (456)
                      +++++|| +||+||+|||+.+|+++..++++|.++|+|+|++|+++|++.+++..|..|+++++|+||||+++|+.|.+.
T Consensus       189 ~~~~pal-aGN~VVlKPs~~tp~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FTGS~~~G~~i~~~  267 (522)
T cd07123         189 LAGAPAL-MGNVVLWKPSDTAVLSNYLVYKILEEAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSLWKQ  267 (522)
T ss_pred             HHHHHHH-hCCEEEEECCCCCCHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCcCEEEEECCHHHHHHHHHH
Confidence            9999999 699999999999999999999999999999999999999877889999999999999999999999999999


Q ss_pred             HhhCCCc------cEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhh
Q 012806          294 AAKSNLK------PVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRI  367 (456)
Q Consensus       294 ~a~~~~~------~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~  367 (456)
                      +++ +++      ++++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++
T Consensus       268 aa~-~l~~~~~~~~v~lElGGkn~~IV~~dAdl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~  346 (522)
T cd07123         268 IGE-NLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLWPEVKERLLEELKEIK  346 (522)
T ss_pred             HHh-hcccccccCCEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCc
Confidence            987 666      8999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHc-CCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEE
Q 012806          368 VGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIES-NATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFII  445 (456)
Q Consensus       368 ~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~-Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~  445 (456)
                      +|+|+|+++++||++++++++++.++|++++++ |+++++||....++|+|++||||.+++++|+++.+ +||||++|+.
T Consensus       347 ~G~p~d~~t~~Gpli~~~~~~~v~~~v~~a~~~~Ga~vl~gg~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~V~~  426 (522)
T cd07123         347 MGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHKLMTEEIFGPVLTVYV  426 (522)
T ss_pred             cCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEeCCCcCCCCCceEcCEEEeCCCCCChhhhcCCCCCeEEEEE
Confidence            999999999999999999999999999999999 99999999764456899999999999999977775 9999999999


Q ss_pred             Ecc--ccccccc
Q 012806          446 LCV--VTDCTSI  455 (456)
Q Consensus       446 ~~~--~~eai~~  455 (456)
                      +++  .+|+|++
T Consensus       427 ~~~~~~~eai~~  438 (522)
T cd07123         427 YPDSDFEETLEL  438 (522)
T ss_pred             eCCCCHHHHHHH
Confidence            996  5898864

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences.

>cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins

Probab=100.00  E-value=4e-80  Score=644.98  Aligned_cols=398  Identities=58%  Similarity=0.983  Sum_probs=373.2

Q ss_pred             cCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 012806           58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME  137 (456)
Q Consensus        58 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~  137 (456)
                      .++||||+|+.+.++.+++++||.||+++++++.++.+|++.++++|++||+...|+.++.++|.++|+++++.|.++.+
T Consensus         4 ~~~~I~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~   83 (476)
T cd07091           4 TGLFINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMDPRERGRLLNKLADLIERDRD   83 (476)
T ss_pred             ccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence            46899999987667789999999999999999999999999999999999993235599999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHH
Q 012806          138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVA  217 (456)
Q Consensus       138 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~  217 (456)
                      +|++++++|+|||..++...|+..+++.+++++++.++..+...+...+...+..++|+|||++|+|||||+..++++++
T Consensus        84 ~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~  163 (476)
T cd07091          84 ELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQGKTIPIDGNFLAYTRREPIGVCGQIIPWNFPLLMLAWKLA  163 (476)
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceEEEEEeceeEEEEECCCcCHHHHHHHHHH
Confidence            99999999999998776557999999999999998887766655444455678899999999999999999999999999


Q ss_pred             HHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhC
Q 012806          218 PALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKS  297 (456)
Q Consensus       218 ~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~  297 (456)
                      +||++||+||+|||+.+|.++..+.++|.++|+|+|++++|+|++.+.+..|..|+++|.|+||||+.+|+.|.+.++..
T Consensus       164 ~AL~aGN~VvlKps~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~g~~v~~~aa~~  243 (476)
T cd07091         164 PALAAGNTVVLKPAEQTPLSALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAAAKS  243 (476)
T ss_pred             HHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999998888899999999999999999999999999988866


Q ss_pred             CCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCc
Q 012806          298 NLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVE  377 (456)
Q Consensus       298 ~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~  377 (456)
                      +++|+++|+|||+|+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|++++++
T Consensus       244 ~~~~~~lElgG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~L~~~~~~~~~g~p~~~~~~  323 (476)
T cd07091         244 NLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVEKFKARAEKRVVGDPFDPDTF  323 (476)
T ss_pred             CCceEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCCc
Confidence            88999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          378 QGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       378 ~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      +||++++.+++++.++|++++++|+++++||....+.|+|++|||+.+++++|+.+.+ +||||++|+.++|.+|+|++
T Consensus       324 ~gpli~~~~~~~v~~~i~~a~~~ga~vl~gg~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~  402 (476)
T cd07091         324 QGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDEVIER  402 (476)
T ss_pred             CCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECcEEecCCCCCChhhhCCCCCCeEEEeecCCHHHHHHH
Confidence            9999999999999999999999999999999875567899999999999999977765 99999999999999999875

ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co

>cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2

Probab=100.00  E-value=3.7e-80  Score=645.17  Aligned_cols=392  Identities=33%  Similarity=0.521  Sum_probs=367.9

Q ss_pred             CceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 012806           59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEE  138 (456)
Q Consensus        59 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~  138 (456)
                      ++||||+|+.+.++++++++||.||+++++++.++.+|++.++++|++|++  .|+.++..+|.++|+++++.|+++.++
T Consensus         2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~e   79 (478)
T cd07085           2 KLFINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFP--AWSATPVLKRQQVMFKFRQLLEENLDE   79 (478)
T ss_pred             CceECCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence            579999999766678999999999999999999999999999999999999  899999999999999999999999999


Q ss_pred             HHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCC-CCCcceEEEeeccceEEEEccCCchHHHHHhHHH
Q 012806          139 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVA  217 (456)
Q Consensus       139 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~  217 (456)
                      |++++++|+|||..+++ .|+..+++.++|++.......++..+. ..+...+..++|+|||++|+|||||+...+++++
T Consensus        80 l~~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~  158 (478)
T cd07085          80 LARLITLEHGKTLADAR-GDVLRGLEVVEFACSIPHLLKGEYLENVARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFP  158 (478)
T ss_pred             HHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhCCeecccCCCCceeEEEEecceEEEEECCCChHHHHHHHHHH
Confidence            99999999999999998 699999999999998777666654432 2244578899999999999999999999999999


Q ss_pred             HHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhC
Q 012806          218 PALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKS  297 (456)
Q Consensus       218 ~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~  297 (456)
                      +||++||+||+|||+.+|+++..++++|.++|+|+|++++++| +.+.+..|+.|++++.|+||||+.+|+.|.+.+++ 
T Consensus       159 ~ALaaGN~VvlKps~~tp~~~~~l~~~l~~aGlP~gvv~~v~g-~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~-  236 (478)
T cd07085         159 MAIACGNTFVLKPSERVPGAAMRLAELLQEAGLPDGVLNVVHG-GKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAA-  236 (478)
T ss_pred             HHHhcCCEEEEECCCcCcHHHHHHHHHHHHhCCCCCcEEEEec-CHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhh-
Confidence            9999999999999999999999999999999999999999998 45678999999999999999999999999998887 


Q ss_pred             CCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCc
Q 012806          298 NLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVE  377 (456)
Q Consensus       298 ~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~  377 (456)
                      +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+++++
T Consensus       237 ~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~~  316 (478)
T cd07085         237 NGKRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKLVERAKKLKVGAGDDPGAD  316 (478)
T ss_pred             cCCcEEecCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCC
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccC----CCCceEecEEEecCCCChHhhhc-cccceEEeEEEcccccc
Q 012806          378 QGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG----NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDC  452 (456)
Q Consensus       378 ~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~----~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~ea  452 (456)
                      +||++++++++++.++|++++++||++++||....    ++|+|++|||+.+++++|+.+.+ +||||++|+.+++.+|+
T Consensus       317 ~gpli~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~dea  396 (478)
T cd07085         317 MGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEA  396 (478)
T ss_pred             cCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCChhhhCcCcCCeEEEEEeCCHHHH
Confidence            99999999999999999999999999999997422    36899999999999999977765 99999999999999999


Q ss_pred             ccc
Q 012806          453 TSI  455 (456)
Q Consensus       453 i~~  455 (456)
                      |++
T Consensus       397 i~~  399 (478)
T cd07085         397 IAI  399 (478)
T ss_pred             HHH
Confidence            875

Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.

>TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1

Probab=100.00  E-value=3.8e-80  Score=648.72  Aligned_cols=395  Identities=28%  Similarity=0.396  Sum_probs=366.4

Q ss_pred             CccCceeCCEEeeCCCCCeeeeecCCC-CceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH-
Q 012806           56 SYTKNLINGQFVDAASGKTFPVYDPRT-AEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIE-  133 (456)
Q Consensus        56 ~~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~-  133 (456)
                      ...++||||+|+.+ ++.+++++||.| |+++++++.++.+|++.++++|++||+  .|+.++..+|.++|+++++.|+ 
T Consensus        30 ~~~~~~i~G~~~~~-~~~~~~~~nP~t~g~~i~~~~~~~~~~v~~av~~A~~a~~--~W~~~~~~~R~~~L~k~a~~l~~  106 (533)
T TIGR01236        30 IEIPLVIGGEEVMG-SGERIDQVQPHNHQAVLAKATNATEEDAAKAVEAALDAKK--DWSALPFYDRAAIFLKAADLLSG  106 (533)
T ss_pred             eeeceeECCEEecC-CCCEEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHh
Confidence            45678999999864 567899999997 899999999999999999999999999  8999999999999999999999 


Q ss_pred             HhHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCccc-CCCCCcceEEEeecc-ceEEEEccCCchHHH
Q 012806          134 KNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTV-PGDGNYHIQTLHEPI-GVAGQIVPWNFPLLL  211 (456)
Q Consensus       134 ~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~-Gvv~~i~p~N~P~~~  211 (456)
                      +++++|++++++|+||++.+++..++..+++.++|++.++.+..+... ....+...++.++|+ |||++|+|||||+..
T Consensus       107 ~~~~~la~~~~~e~GK~~~~a~~e~v~~~i~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~~~  186 (533)
T TIGR01236       107 PYREEILAATMLGQSKNVYQAEIDAVAELIDFFRFNVKYARELYEQQPSESAPGEWNRTDYRPLEGFVYAISPFNFTAIA  186 (533)
T ss_pred             hcHHHHHHHHHHHcCCcHHHHhHhHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCCEEEEEeCCchHHHH
Confidence            599999999999999999998743499999999999998887765543 222345578889999 999999999999999


Q ss_pred             HHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHH
Q 012806          212 FTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQ  291 (456)
Q Consensus       212 ~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~  291 (456)
                      ..+++++|| +||+||+|||+.+|+++..++++|+++|+|+|++|+++|++.++++.|+.|+++++|+||||+++|+.|.
T Consensus       187 ~~~~~a~AL-aGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~FTGS~~~G~~i~  265 (533)
T TIGR01236       187 GNLPGAPAL-MGNTVIWKPSITATLSNYLTMRILEEAGLPPGVINFVPGDGFAVSDVVLADPRLAGIHFTGSTATFKHLW  265 (533)
T ss_pred             HHHHHHHHH-hCCeEEEECCCcCCHHHHHHHHHHHhcCCCCCcEEEEecCcHHHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence            999999999 7999999999999999999999999999999999999998788999999999999999999999999999


Q ss_pred             HHHhhCCCc------cEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhh
Q 012806          292 ELAAKSNLK------PVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMR  365 (456)
Q Consensus       292 ~~~a~~~~~------~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~  365 (456)
                      +.+++ +++      ++++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++
T Consensus       266 ~~aa~-~l~~~~~~~~v~lElGGknp~IV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~  344 (533)
T TIGR01236       266 KWVAS-NLDRYHNFPRIVGETGGKDFHVVHPSADIDHAVTATIRGAFEYQGQKCSAASRLYVPHSVWPRFKDELLAELAE  344 (533)
T ss_pred             HHHHh-hccccccCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCCCcCCeeEEEchhHHHHHHHHHHHHHhc
Confidence            99988 676      49999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcC--CeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEE
Q 012806          366 RIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESN--ATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFS  442 (456)
Q Consensus       366 ~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~G--a~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~  442 (456)
                      +++|+|.|+++++||++++.+++++.++|++++++|  +++++||.....+|+|++|||+.+++++|+++.+ +||||++
T Consensus       345 l~~G~p~d~~t~~Gpli~~~~~~~v~~~i~~a~~~Ga~a~vl~GG~~~~~~G~~~~PTvl~~~~~d~~i~~eE~FGPVl~  424 (533)
T TIGR01236       345 VKVGDPDDFSNFMGAVIDERSFVKNVKYIERAKGDPAELTILYGGKYDDSEGYFVEPTVILSKDPTDPLMVEEIFGPVLT  424 (533)
T ss_pred             CCcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCCceEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcccCCCCeEE
Confidence            999999999999999999999999999999999997  7999999764456899999999999999977775 9999999


Q ss_pred             eEEEccc--cccccc
Q 012806          443 FIILCVV--TDCTSI  455 (456)
Q Consensus       443 vv~~~~~--~eai~~  455 (456)
                      |+.+++.  +|+|++
T Consensus       425 v~~~~~~~~~eai~~  439 (533)
T TIGR01236       425 VYVYPDDKYKEILDV  439 (533)
T ss_pred             EEEeCCCCHHHHHHH
Confidence            9999995  898864

This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate.

>cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like

Probab=100.00  E-value=6.1e-80  Score=644.55  Aligned_cols=393  Identities=45%  Similarity=0.730  Sum_probs=370.5

Q ss_pred             eeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHH
Q 012806           61 LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELA  140 (456)
Q Consensus        61 ~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la  140 (456)
                      ||||+|+.+.++.+++++||.||+++++++.++.+|++.+++.|++||+++.|+.++..+|.++|+++++.|++++++|+
T Consensus         1 ~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la   80 (482)
T cd07119           1 YIDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQERAALLFRIADKIREDAEELA   80 (482)
T ss_pred             CCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence            69999987666789999999999999999999999999999999999975569999999999999999999999999999


Q ss_pred             HHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHh
Q 012806          141 ALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPAL  220 (456)
Q Consensus       141 ~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL  220 (456)
                      +++++|+|||..+++ .|+..+++.++|++...++..+...+...+...+..++|+|||++|+|||||+...++++++||
T Consensus        81 ~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~AL  159 (482)
T cd07119          81 RLETLNTGKTLRESE-IDIDDVANCFRYYAGLATKETGEVYDVPPHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPAL  159 (482)
T ss_pred             HHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccCCCCceEEEEEeeeeeEEEEcCCchHHHHHHHHHHHHH
Confidence            999999999999998 5999999999999998887666554444455678999999999999999999999999999999


Q ss_pred             hcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCc
Q 012806          221 TCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLK  300 (456)
Q Consensus       221 aaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~  300 (456)
                      ++||+||+|||+.+|+++..++++|.++|+|+|++++++|++.+.+..|..|+++|+|.||||+.+|+.|.+.+++ +++
T Consensus       160 aaGN~VilKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~-~~~  238 (482)
T cd07119         160 AAGNTVVIKPSEVTPLTTIALFELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAG-NVK  238 (482)
T ss_pred             hcCCEEEEECCccccHHHHHHHHHHHHcCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cCC
Confidence            9999999999999999999999999999999999999999777789999999999999999999999999999988 899


Q ss_pred             cEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCC
Q 012806          301 PVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP  380 (456)
Q Consensus       301 ~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gp  380 (456)
                      |+++|+|||||+||++|||+|.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|.++++++||
T Consensus       239 ~~~lElGGkn~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~gp  318 (482)
T cd07119         239 KVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAERAKKIKLGNGLDADTEMGP  318 (482)
T ss_pred             cEEEECCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHHHHHHHHHHHcCCeEEeCCcccC----CCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          381 QIDPEQFQKVLRYIRSGIESNATLECGGDRLG----NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       381 li~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~----~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      ++++.+++++.++|++++++|+++++||....    ..|+|++|||+.+++++|+.+.+ +||||++|+.++|.+|+|++
T Consensus       319 li~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~  398 (482)
T cd07119         319 LVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRL  398 (482)
T ss_pred             CCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceECCEEEecCCCCChHhhCCCCCceEEEeccCCHHHHHHH
Confidence            99999999999999999999999999997532    25899999999999999977775 99999999999999999875

Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde.

>cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like

Probab=100.00  E-value=4.8e-80  Score=643.56  Aligned_cols=392  Identities=39%  Similarity=0.644  Sum_probs=368.0

Q ss_pred             cCceeCCEEeeCCCCCeeeeecCC-CCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 012806           58 TKNLINGQFVDAASGKTFPVYDPR-TAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM  136 (456)
Q Consensus        58 ~~~~I~G~~~~~~~~~~~~v~~P~-tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~  136 (456)
                      +++||||+|+.+.  ..++++||. ||+++++++.++.+|+++++++|++||+  .|+.++.++|.++|+++++.|++++
T Consensus         1 ~~~~i~g~~~~~~--~~~~v~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~   76 (473)
T cd07097           1 YRNYIDGEWVAGG--DGEENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFP--AWRRTSPEARADILDKAGDELEARK   76 (473)
T ss_pred             CCceECCEEecCC--CCceeECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhH
Confidence            3679999998643  357999999 5999999999999999999999999999  9999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCC-CCCcceEEEeeccceEEEEccCCchHHHHHhH
Q 012806          137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWK  215 (456)
Q Consensus       137 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~  215 (456)
                      ++|++++++|+|||..+++ .|+..+++.++||+....+..+...+. ..+...+..++|+|||++|+|||||+.+.+++
T Consensus        77 ~ela~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~Pl~~~~~~  155 (473)
T cd07097          77 EELARLLTREEGKTLPEAR-GEVTRAGQIFRYYAGEALRLSGETLPSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWK  155 (473)
T ss_pred             HHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEEeeeeEEEEcccChHHHHHHHH
Confidence            9999999999999999998 599999999999999888776654432 23455788999999999999999999999999


Q ss_pred             HHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHh
Q 012806          216 VAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA  295 (456)
Q Consensus       216 ~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a  295 (456)
                      +++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+++|++.+++..|..|++++.|.||||+.+|+.|.+.++
T Consensus       156 i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa  235 (473)
T cd07097         156 IAPALAYGNTVVFKPAELTPASAWALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAA  235 (473)
T ss_pred             HHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCCCCcceEEeccCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999987788999999999999999999999999999998


Q ss_pred             hCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCC
Q 012806          296 KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG  375 (456)
Q Consensus       296 ~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~  375 (456)
                      + +++|+++|+|||+|+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+++
T Consensus       236 ~-~~~~~~lElGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~  314 (473)
T cd07097         236 A-RGARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALVERTKALKVGDALDEG  314 (473)
T ss_pred             c-cCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCeeEEEehhHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence            8 899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccC--CCCceEecEEEecCCCChHhhhc-cccceEEeEEEcccccc
Q 012806          376 VEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG--NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDC  452 (456)
Q Consensus       376 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~--~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~ea  452 (456)
                      +++||++++.+++++.++|++++++|+++++||....  +.|+|++|||+.+++++|+.+.+ +||||++|+.++|.+|+
T Consensus       315 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~ea  394 (473)
T cd07097         315 VDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEA  394 (473)
T ss_pred             CcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEeccCCCCChhhhCCCcCceEEEeccCCHHHH
Confidence            9999999999999999999999999999999997543  35899999999999999977765 99999999999999999


Q ss_pred             ccc
Q 012806          453 TSI  455 (456)
Q Consensus       453 i~~  455 (456)
                      |++
T Consensus       395 i~~  397 (473)
T cd07097         395 LAI  397 (473)
T ss_pred             HHH
Confidence            875

Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.

>TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase

Probab=100.00  E-value=4.1e-80  Score=646.41  Aligned_cols=392  Identities=40%  Similarity=0.679  Sum_probs=368.3

Q ss_pred             CceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 012806           59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEE  138 (456)
Q Consensus        59 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~  138 (456)
                      ++||||+|+.+.++.+++++||.||+++++++.++.+|++.++++|++|++  .|+.++.++|.++|+++++.|++++++
T Consensus         2 ~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~~   79 (488)
T TIGR02299         2 GHFIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFK--RWAELKAAERKRYLHKIADLIEQHADE   79 (488)
T ss_pred             CccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence            469999999766678999999999999999999999999999999999999  899999999999999999999999999


Q ss_pred             HHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhh-HhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHH
Q 012806          139 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWAD-KIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVA  217 (456)
Q Consensus       139 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~  217 (456)
                      |++++++|+|||..+++ .|+..+++.++|++.... ...+...+.+ ....+..++|+|||++|+|||||+.+.+++++
T Consensus        80 l~~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~  157 (488)
T TIGR02299        80 IAVLECLDCGQPLRQTR-QQVIRAAENFRFFADKCEEAMDGRTYPVD-THLNYTVRVPVGPVGLITPWNAPFMLSTWKIA  157 (488)
T ss_pred             HHHHHHHHcCCcHHHHH-HHHHHHHHHHHHHHHhHHHhcCCccccCC-CceEEEEEEecceEEEECCCccHHHHHHHHHH
Confidence            99999999999999998 699999999999998876 3344443332 34567889999999999999999999999999


Q ss_pred             HHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhC
Q 012806          218 PALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKS  297 (456)
Q Consensus       218 ~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~  297 (456)
                      +||++||+||+|||+.+|+++..+.++|.++|+|+|++++++|++.+.+..|..|+++|.|.||||+.+|+.|.+.+++ 
T Consensus       158 ~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~aa~-  236 (488)
T TIGR02299       158 PALAFGNTVVLKPAEWSPLTAARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGAD-  236 (488)
T ss_pred             HHHHcCCEEEEECchhchHHHHHHHHHHHHcCcChhheeEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHh-
Confidence            9999999999999999999999999999999999999999999887888999999999999999999999999999988 


Q ss_pred             CCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCc
Q 012806          298 NLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVE  377 (456)
Q Consensus       298 ~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~  377 (456)
                      +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+++++
T Consensus       237 ~l~~~~lElGGknp~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~~~~~  316 (488)
T TIGR02299       237 TLKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEKLVERVRAIRVGHPLDPETE  316 (488)
T ss_pred             cCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCCcCCCCCCCCC
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccC-------CCCceEecEEEecCCCChHhhhc-cccceEEeEEEccc
Q 012806          378 QGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG-------NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVV  449 (456)
Q Consensus       378 ~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~-------~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~  449 (456)
                      +||++++++++++.++|++++++|+++++||....       .+|+|++|||+.+++++|+.+.+ +||||++|+.|++.
T Consensus       317 ~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~  396 (488)
T TIGR02299       317 VGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDE  396 (488)
T ss_pred             CCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCcccccccCCCCeEEccEEEecCCCCCchhhCCCcCCeEEEEeeCCH
Confidence            99999999999999999999999999999997532       25899999999999999977775 99999999999999


Q ss_pred             cccccc
Q 012806          450 TDCTSI  455 (456)
Q Consensus       450 ~eai~~  455 (456)
                      +|+|++
T Consensus       397 ~eai~~  402 (488)
T TIGR02299       397 EEAIEK  402 (488)
T ss_pred             HHHHHH
Confidence            999875

This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring.

>PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional

Probab=100.00  E-value=6.8e-80  Score=643.09  Aligned_cols=393  Identities=40%  Similarity=0.645  Sum_probs=369.4

Q ss_pred             cCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 012806           58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME  137 (456)
Q Consensus        58 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~  137 (456)
                      .++||||+|+.. ++++++++||.||+++++++.++.+|+++++++|++||+  .|+.++.++|.++|+++++.|.++++
T Consensus         3 ~~~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~   79 (475)
T PRK13473          3 TKLLINGELVAG-EGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFP--EWSQTTPKERAEALLKLADAIEENAD   79 (475)
T ss_pred             ccceECCEEecC-CCCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHH
Confidence            468999999864 678999999999999999999999999999999999999  99999999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCC-CCCcceEEEeeccceEEEEccCCchHHHHHhHH
Q 012806          138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKV  216 (456)
Q Consensus       138 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~  216 (456)
                      +|++++++|+|||..++...|+..+++.++++++..+++.+...+. ..+...+..++|+|||++|+|||||+...++++
T Consensus        80 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~i  159 (475)
T PRK13473         80 EFARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLEGKAAGEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKL  159 (475)
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceeEEEEccCChHHHHHHHHH
Confidence            9999999999999998865699999999999998887766543221 223356788999999999999999999999999


Q ss_pred             HHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhh
Q 012806          217 APALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK  296 (456)
Q Consensus       217 ~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~  296 (456)
                      ++||++||+||+|||+.+|+++..+.+++.++ +|+|++++++|++.+.+..|..|+++|.|+||||+++|+.|.+.+++
T Consensus       160 ~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~a-lP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs~~~g~~i~~~aa~  238 (475)
T PRK13473        160 APALAAGNTVVLKPSEITPLTALKLAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAAD  238 (475)
T ss_pred             HHHHhcCCEEEEECCCCChHHHHHHHHHHHHh-CCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh
Confidence            99999999999999999999999999999999 99999999999888899999999999999999999999999999988


Q ss_pred             CCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCC
Q 012806          297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGV  376 (456)
Q Consensus       297 ~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~  376 (456)
                       +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++
T Consensus       239 -~~~~~~lElgG~~p~iV~~dADld~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~  317 (475)
T PRK13473        239 -SVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLVAKLAAAVATLKVGDPDDEDT  317 (475)
T ss_pred             -cCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCC
Confidence             8999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCHHHHHHHHHHHHHHHHcC-CeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEcccccccc
Q 012806          377 EQGPQIDPEQFQKVLRYIRSGIESN-ATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTS  454 (456)
Q Consensus       377 ~~Gpli~~~~~~~v~~~i~~a~~~G-a~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~  454 (456)
                      ++||++++.+++++.++|+++.++| +++++||....+.|+|++|||+.+++++|+.+.+ +||||++|+.++|.+|+|+
T Consensus       318 ~~gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~  397 (475)
T PRK13473        318 ELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVR  397 (475)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHcCCeEEEECCCcCCCCceeEcCEEEecCCCCChhhhCCccCCeEEEeccCCHHHHHH
Confidence            9999999999999999999999999 9999999865446899999999999999977775 9999999999999999987


Q ss_pred             c
Q 012806          455 I  455 (456)
Q Consensus       455 ~  455 (456)
                      +
T Consensus       398 ~  398 (475)
T PRK13473        398 W  398 (475)
T ss_pred             H
Confidence            5

>PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-79  Score=641.87  Aligned_cols=398  Identities=39%  Similarity=0.633  Sum_probs=372.1

Q ss_pred             CccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 012806           56 SYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKN  135 (456)
Q Consensus        56 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~  135 (456)
                      .+.++||||+|+...++++++++||.||+++++++.++.+|+++++++|++||+.+.|+.+|..+|.++|+++++.|.++
T Consensus        18 ~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~v~~~~~~dv~~av~aA~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~   97 (494)
T PRK09847         18 IENRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAH   97 (494)
T ss_pred             cccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHh
Confidence            34468999999877678899999999999999999999999999999999999755699999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhH
Q 012806          136 MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWK  215 (456)
Q Consensus       136 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~  215 (456)
                      +++|++++++|+|||..++...|+..+++.++||+...++..+...+...+...++.++|+|||++|+|||||+..++++
T Consensus        98 ~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~  177 (494)
T PRK09847         98 AEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATTSSHELAMIVREPVGVIAAIVPWNFPLLLTCWK  177 (494)
T ss_pred             HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEecceeEEEEECCCccHHHHHHHH
Confidence            99999999999999998876569999999999999998887766544333445678999999999999999999999999


Q ss_pred             HHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHh
Q 012806          216 VAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA  295 (456)
Q Consensus       216 ~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a  295 (456)
                      +++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|++.+.+..|+.|+++|.|+||||+.+|+.|.+.++
T Consensus       178 ~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~v~fTGs~~~g~~v~~~aa  257 (494)
T PRK09847        178 LGPALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAG  257 (494)
T ss_pred             HHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCcCcEEEEeCCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHhh
Confidence            99999999999999999999999999999999999999999999988888999999999999999999999999999888


Q ss_pred             hCCCccEEEecCCCCceEEcCCC-CHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCC
Q 012806          296 KSNLKPVTLELGGKSPFIIFDDA-DVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKS  374 (456)
Q Consensus       296 ~~~~~~v~lelgG~~~~iV~~da-D~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~  374 (456)
                      ..+++|+++|+||++|.||.+|+ |+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++
T Consensus       258 ~~~~~~~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~~~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~  337 (494)
T PRK09847        258 DSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGHPLDP  337 (494)
T ss_pred             hhCCCeEEEecCCCCeeEEcCCccCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence            44789999999999999999997 99999999999999999999999999999999999999999999999999999999


Q ss_pred             CCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccc
Q 012806          375 GVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCT  453 (456)
Q Consensus       375 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai  453 (456)
                      ++.+||++++.+++++.++|++++++| ++++||... ..++|++|||+.+++++|+.+.+ +||||++|+.++|.+|+|
T Consensus       338 ~~~~gpli~~~~~~~v~~~v~~a~~~G-~i~~gg~~~-~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai  415 (494)
T PRK09847        338 ATTMGTLIDCAHADSVHSFIREGESKG-QLLLDGRNA-GLAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQAL  415 (494)
T ss_pred             CCcCCCCcCHHHHHHHHHHHHHHHHCC-eEEECCccC-CCCceEeeEEEeCCCCCChHHhCcCcCceEEEEecCCHHHHH
Confidence            999999999999999999999999999 999998763 35789999999999999977765 999999999999999999


Q ss_pred             cc
Q 012806          454 SI  455 (456)
Q Consensus       454 ~~  455 (456)
                      ++
T Consensus       416 ~~  417 (494)
T PRK09847        416 QL  417 (494)
T ss_pred             HH
Confidence            75

>cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins

Probab=100.00  E-value=6.6e-80  Score=642.94  Aligned_cols=390  Identities=36%  Similarity=0.596  Sum_probs=367.1

Q ss_pred             ceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 012806           60 NLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEEL  139 (456)
Q Consensus        60 ~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l  139 (456)
                      +||||+|+.+. +.+++++||.||+++++++.++.+|++.++++|++||+  .|++++.++|.++|+++++.|++++++|
T Consensus         1 ~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el   77 (478)
T cd07086           1 GVIGGEWVGSG-GETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFK--EWRKVPAPRRGEIVRQIGEALRKKKEAL   77 (478)
T ss_pred             CcCCCEEecCC-CCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHH
Confidence            58999998754 67899999999999999999999999999999999999  8999999999999999999999999999


Q ss_pred             HHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCC-CCcceEEEeeccceEEEEccCCchHHHHHhHHHH
Q 012806          140 AALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAP  218 (456)
Q Consensus       140 a~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~  218 (456)
                      ++++++|+|||+.+++ .|+..+++.++|+++..+++.+...+.. .+...+..++|+|||++|+|||||+.++++++++
T Consensus        78 a~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~  156 (478)
T cd07086          78 GRLVSLEMGKILPEGL-GEVQEMIDICDYAVGLSRMLYGLTIPSERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAI  156 (478)
T ss_pred             HHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceeEEEECCCCcHHHHHHHHHHH
Confidence            9999999999999988 5999999999999998888766544321 2345678899999999999999999999999999


Q ss_pred             HhhcCCEEEEecCCCchHHHHHHHHHHHHc----CCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHH
Q 012806          219 ALTCGNTIVLKSAEQTPLTALYVAKLFHEA----GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA  294 (456)
Q Consensus       219 ALaaGN~vvlKps~~~p~~~~~l~~ll~~a----GlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~  294 (456)
                      ||++||+||+|||+.+|.++..++++++++    |+|+|++++++|++. .+..|..|+++|.|.||||+.+|+.|.+.+
T Consensus       157 ALaaGN~VIlKps~~~p~~~~~l~~~~~~al~~~glP~gvv~~v~g~~~-~~~~L~~~~~vd~v~fTGs~~~g~~i~~~a  235 (478)
T cd07086         157 ALVCGNTVVWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGD-GGELLVHDPRVPLVSFTGSTEVGRRVGETV  235 (478)
T ss_pred             HHHcCCeEEEECCCcchHHHHHHHHHHHHhhhccCCCccceEEEecCch-hHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence            999999999999999999999999999999    999999999999665 889999999999999999999999999999


Q ss_pred             hhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCC
Q 012806          295 AKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKS  374 (456)
Q Consensus       295 a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~  374 (456)
                      ++ +++++++|+|||+|+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++
T Consensus       236 a~-~~~~~~lElGG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~  314 (478)
T cd07086         236 AR-RFGRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEFLERLVKAYKQVRIGDPLDE  314 (478)
T ss_pred             hc-cCCcEEeecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCCCcCCeEEEEcHHHHHHHHHHHHHHHHhCCcCCCCCC
Confidence            88 89999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCC--CCceEecEEEecCCCChHhhhc-cccceEEeEEEccccc
Q 012806          375 GVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGN--RGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTD  451 (456)
Q Consensus       375 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~--~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~e  451 (456)
                      ++++||++++.+++++.++|++++++|+++++||.+...  +|+|++|||+.+++++|+.+.+ +||||++|+.++|.+|
T Consensus       315 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPVl~v~~~~~~de  394 (478)
T cd07086         315 GTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEE  394 (478)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEecCCCCCChhhcCCCcCCEEEEEEeCCHHH
Confidence            999999999999999999999999999999999976443  5899999999999999977775 9999999999999999


Q ss_pred             cccc
Q 012806          452 CTSI  455 (456)
Q Consensus       452 ai~~  455 (456)
                      +|++
T Consensus       395 ai~~  398 (478)
T cd07086         395 AIAI  398 (478)
T ss_pred             HHHH
Confidence            9875

ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105).

>TIGR01804 BADH glycine betaine aldehyde dehydrogenase

Probab=100.00  E-value=7.8e-80  Score=641.35  Aligned_cols=392  Identities=43%  Similarity=0.718  Sum_probs=369.6

Q ss_pred             eeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHH
Q 012806           61 LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELA  140 (456)
Q Consensus        61 ~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la  140 (456)
                      ||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+  .|+.++.++|.++|+++++.|.+++++|+
T Consensus         1 ~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la   78 (467)
T TIGR01804         1 FIDGEWVEASAGETREIINPANQEVIATVAEATREDVERAIAAARRAQG--EWASMTPEERGRILRRIAELIRERNEELA   78 (467)
T ss_pred             CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence            6999998766678999999999999999999999999999999999999  99999999999999999999999999999


Q ss_pred             HHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHh
Q 012806          141 ALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPAL  220 (456)
Q Consensus       141 ~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL  220 (456)
                      +++++|+|||..++...|+..+++.++|++...++..+...+.......+..++|+|||++|+|||||+...++++++||
T Consensus        79 ~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL  158 (467)
T TIGR01804        79 KLETLDTGKTLEETSVADMDDIADVFEFFAGLADKDGGEIIPLPIPSFSYTIREPLGVCVGIGAWNYPLQIASWKIAPAL  158 (467)
T ss_pred             HHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCCccccCCCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHH
Confidence            99999999999998546999999999999998887666554433334567889999999999999999999999999999


Q ss_pred             hcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCc
Q 012806          221 TCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLK  300 (456)
Q Consensus       221 aaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~  300 (456)
                      ++||+||+|||+.+|.++..++++|.++|+|+|++++++|++.+++..|..|+++|+|.||||+.+|+.|.+.+++ ++|
T Consensus       159 aaGN~VvlKps~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~-~l~  237 (467)
T TIGR01804       159 AAGNAMVFKPSEITPLTALKVAELMEEAGLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGVPTGKKIMAAAAD-HLK  237 (467)
T ss_pred             hcCCEEEeeCCccCcHHHHHHHHHHHHcCcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cCC
Confidence            9999999999999999999999999999999999999999778899999999999999999999999999999888 899


Q ss_pred             cEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCC
Q 012806          301 PVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP  380 (456)
Q Consensus       301 ~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gp  380 (456)
                      ++++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||
T Consensus       238 ~~~lElGG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gp  317 (467)
T TIGR01804       238 HVTMELGGKSPLIVFDDADLELAVDQAMNGNFFSAGQVCSNGTRVFVHNKIKEKFEARLVERTKRIKLGDGFDEATEMGP  317 (467)
T ss_pred             cEEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCCEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCccCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHHHHHHHHHHHcCCeEEeCCcccC----CCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          381 QIDPEQFQKVLRYIRSGIESNATLECGGDRLG----NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       381 li~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~----~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      ++++.+++++.++|++++++|+++++||....    ..|+|++|||+.+++++|+.+.+ +||||++|+.++|.+|+|++
T Consensus       318 li~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~  397 (467)
T TIGR01804       318 LISAEHRDKVESYIEKGKEEGATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMTIVREEIFGPVMTVLTFSSEDEVIAR  397 (467)
T ss_pred             cCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCeEEeeEEEeCCCCCChHHhCCCCCceEEEEecCCHHHHHHH
Confidence            99999999999999999999999999997532    25899999999999999977775 99999999999999999875

Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171).

>PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed

Probab=100.00  E-value=1.2e-79  Score=641.63  Aligned_cols=391  Identities=30%  Similarity=0.416  Sum_probs=363.6

Q ss_pred             CceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 012806           59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEE  138 (456)
Q Consensus        59 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~  138 (456)
                      .+||||+|+.+ ++++++++||.||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|+++.++
T Consensus         2 ~~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~a~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~e   78 (487)
T PRK09457          2 TLWINGDWIAG-QGEAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFP--AWARLSFEERQAIVERFAALLEENKEE   78 (487)
T ss_pred             CceECCEEecC-CCCEEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHhHHHH
Confidence            37999999864 467899999999999999999999999999999999999  899999999999999999999999999


Q ss_pred             HHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHH
Q 012806          139 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAP  218 (456)
Q Consensus       139 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~  218 (456)
                      |++++++|+|||..+++ .|+..+++.+++++.+..+..+.......+...+..++|+|||++|+|||||+.++++++++
T Consensus        79 la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~  157 (487)
T PRK09457         79 LAEVIARETGKPLWEAA-TEVTAMINKIAISIQAYHERTGEKRSEMADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVP  157 (487)
T ss_pred             HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCceeccCCCceeEEEEeccEEEEEECCCchHHHHHHHHHHH
Confidence            99999999999999998 59999999999998887666554433223445688899999999999999999999999999


Q ss_pred             HhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCC
Q 012806          219 ALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN  298 (456)
Q Consensus       219 ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~  298 (456)
                      ||++||+||+|||+.+|+++..++++++++|+|+|++++|+| +.+.+..|..|+++|.|+||||+.+|+.|.+.+++..
T Consensus       158 ALaaGN~VvlKPs~~tp~t~~~l~~l~~~aGlP~gvv~~v~g-~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~  236 (487)
T PRK09457        158 ALLAGNTVVFKPSELTPWVAELTVKLWQQAGLPAGVLNLVQG-GRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQP  236 (487)
T ss_pred             HHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcC
Confidence            999999999999999999999999999999999999999999 6678899999999999999999999999999877645


Q ss_pred             CccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccH-HHHHHHHHHHHhhhhcCCCC-CCCC
Q 012806          299 LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVY-DEFVEKAKARAMRRIVGDPF-KSGV  376 (456)
Q Consensus       299 ~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~-~~f~~~l~~~~~~~~~g~p~-~~~~  376 (456)
                      .+++++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++| |+|+++|+++++++++|||+ ++.+
T Consensus       237 ~~~~~lElGGk~p~IV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~vG~p~~~~~~  316 (487)
T PRK09457        237 EKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLARLVAVAKRLTVGRWDAEPQP  316 (487)
T ss_pred             CCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHhhccCCCCCCCceEEEeccccHHHHHHHHHHHHhcCcCCCCCcCCCC
Confidence            678999999999999999999999999999999999999999999999999998 99999999999999999997 7889


Q ss_pred             ccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          377 EQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       377 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      ++||+++.++++++.++|++++++|+++++||...+++|+|++|||+ +++++|+.+.+ +||||++|+.+++.+|+|++
T Consensus       317 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl-~v~~~~~i~~eE~FGPVl~V~~~~~~deai~~  395 (487)
T PRK09457        317 FMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQAGTGLLTPGII-DVTGVAELPDEEYFGPLLQVVRYDDFDEAIRL  395 (487)
T ss_pred             ccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccCCCCeeEecEEe-ccCCCChHHhCCCcCCeEEEEEeCCHHHHHHH
Confidence            99999999999999999999999999999988654456899999999 79999977765 99999999999999999975

>cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like

Probab=100.00  E-value=1.3e-79  Score=641.98  Aligned_cols=395  Identities=47%  Similarity=0.814  Sum_probs=369.9

Q ss_pred             cCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCC-CCCCCHHHHHHHHHHHHHHHHHhH
Q 012806           58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGP-WPKMTPYERSRIMLRAADLIEKNM  136 (456)
Q Consensus        58 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~-w~~~~~~~R~~iL~~~a~~l~~~~  136 (456)
                      .++||||+|+.+.++.+++++||.||+++++++.++.+|++.++++|++|++  . |+.++.++|.++|+++++.|.+++
T Consensus         8 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~ai~~A~~A~~--~~w~~~~~~~R~~iL~~~a~~l~~~~   85 (484)
T cd07144           8 TGLFINNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAFE--SWWSKVTGEERGELLDKLADLVEKNR   85 (484)
T ss_pred             cCcEECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hhHhcCCHHHHHHHHHHHHHHHHHhH
Confidence            3679999998765678899999999999999999999999999999999998  5 889999999999999999999999


Q ss_pred             HHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHH
Q 012806          137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKV  216 (456)
Q Consensus       137 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~  216 (456)
                      ++|++++++|+|||..++...|+..+++.+++++++.++..+...+...+...+..++|+|||++|+|||||+.++++++
T Consensus        86 ~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~  165 (484)
T cd07144          86 DLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGKTIPTSPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKL  165 (484)
T ss_pred             HHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCceEEEEEecceEEEEECcCCCHHHHHHHHH
Confidence            99999999999999877644699999999999999988876655443334456888999999999999999999999999


Q ss_pred             HHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhh
Q 012806          217 APALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK  296 (456)
Q Consensus       217 ~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~  296 (456)
                      ++||++||+||+|||+.+|+++..+.++|.++|+|+|++|+|+|++.+.++.|..|+++|+|.||||+.+|+.|.+.+++
T Consensus       166 ~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~a~~  245 (484)
T cd07144         166 APALAAGNTVVIKPAENTPLSLLYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAAAQ  245 (484)
T ss_pred             HHHHHcCCEEEEECCccchHHHHHHHHHHHHhCcCCCcEEEEecCCchHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999888899999999999999999999999999999888


Q ss_pred             CCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhh-hhcCCCCCCC
Q 012806          297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMR-RIVGDPFKSG  375 (456)
Q Consensus       297 ~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~-~~~g~p~~~~  375 (456)
                       +++|+++|+|||||+||++|||++.|++.+++++|+|+||.|++++|||||+++||+|+++|++++++ +++|+|++++
T Consensus       246 -~~~~~~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~G~p~~~~  324 (484)
T cd07144         246 -NLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKVGSPFDDD  324 (484)
T ss_pred             -cCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhhCCcCCCCCCC
Confidence             89999999999999999999999999999999999999999999999999999999999999999985 8999999999


Q ss_pred             CccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccC---CCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccc
Q 012806          376 VEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG---NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTD  451 (456)
Q Consensus       376 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~---~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~e  451 (456)
                      +++||++++.+++++.++|++++++|+++++||....   ..|+|++|||+.+++++|+.+.+ +||||++|+.++|.+|
T Consensus       325 ~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~e  404 (484)
T cd07144         325 TVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYEE  404 (484)
T ss_pred             CcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCcccCCCCceECCEEEeCCCCCCchhhCCCCCceEEEeccCCHHH
Confidence            9999999999999999999999999999999997643   36899999999999999977775 9999999999999999


Q ss_pred             cccc
Q 012806          452 CTSI  455 (456)
Q Consensus       452 ai~~  455 (456)
                      +|++
T Consensus       405 ai~~  408 (484)
T cd07144         405 AIKK  408 (484)
T ss_pred             HHHH
Confidence            9875

NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD.

>cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like

Probab=100.00  E-value=1.5e-79  Score=640.49  Aligned_cols=391  Identities=39%  Similarity=0.659  Sum_probs=365.0

Q ss_pred             CceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 012806           59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEE  138 (456)
Q Consensus        59 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~  138 (456)
                      ++||||+|+.+.++++++++||.||+++++++.++.+|++.++++|++||+  .|+.++..+|.++|+++++.|+++.++
T Consensus         2 ~~~i~g~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~   79 (479)
T cd07116           2 DNFIGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKE--AWGKTSVAERANILNKIADRMEANLEM   79 (479)
T ss_pred             CceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence            579999999877788999999999999999999999999999999999999  899999999999999999999999999


Q ss_pred             HHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHH
Q 012806          139 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAP  218 (456)
Q Consensus       139 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~  218 (456)
                      |+.++++|+|||..+++..|+..+++.++||++...+..+...+...+...+..++|+|||++|+|||||+.+.++++++
T Consensus        80 la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~  159 (479)
T cd07116          80 LAVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSISEIDENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAP  159 (479)
T ss_pred             HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhHHHcCCeeecCCCCceEEEEEeccceEEEECCCchHHHHHHHHHHH
Confidence            99999999999999887569999999999999988776555444334455788999999999999999999999999999


Q ss_pred             HhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCC
Q 012806          219 ALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN  298 (456)
Q Consensus       219 ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~  298 (456)
                      ||++||+||+|||+.+|+++..+++++.++ +|+|++|+++|.+.+.+..|+.|+++++|+||||+.+|+.|.+.+++ +
T Consensus       160 ALaaGN~VV~KPs~~tp~~~~~l~~l~~~a-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~-~  237 (479)
T cd07116         160 ALAAGNCVVLKPAEQTPASILVLMELIGDL-LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYASE-N  237 (479)
T ss_pred             HHHcCCEEEEECCCCChHHHHHHHHHHHHH-CCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHc-C
Confidence            999999999999999999999999999998 99999999999778889999999999999999999999999999988 8


Q ss_pred             CccEEEecCCCCceEEcCC------CCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCC
Q 012806          299 LKPVTLELGGKSPFIIFDD------ADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPF  372 (456)
Q Consensus       299 ~~~v~lelgG~~~~iV~~d------aD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~  372 (456)
                      ++|+++|+|||+|+||++|      +|+|.|++.++++. +|+||.|++++|||||+++||+|+++|+++++++++|+|+
T Consensus       238 ~~p~~lElGGk~p~iV~~da~~~~~adl~~A~~~i~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~  316 (479)
T cd07116         238 IIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFA-LNQGEVCTCPSRALIQESIYDRFMERALERVKAIKQGNPL  316 (479)
T ss_pred             CCeEEEECCCCCeEEEecCcccccccCHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCC
Confidence            9999999999999999987      79999999999865 5999999999999999999999999999999999999999


Q ss_pred             CCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccC----CCCceEecEEEecCCCChHhhhc-cccceEEeEEEc
Q 012806          373 KSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG----NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILC  447 (456)
Q Consensus       373 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~----~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~  447 (456)
                      ++++.+||++++++++++.++|++++++|+++++||....    .+|+|++|||+.+++ +|+.+.+ +||||++|+.++
T Consensus       317 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~-~~~~~~eE~FGPVl~v~~~~  395 (479)
T cd07116         317 DTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKGGN-KMRIFQEEIFGPVLAVTTFK  395 (479)
T ss_pred             CCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeeecCeEEccCC-CChhhhcCCcCceEEEEEeC
Confidence            9999999999999999999999999999999999997532    368999999999875 8867775 999999999999


Q ss_pred             cccccccc
Q 012806          448 VVTDCTSI  455 (456)
Q Consensus       448 ~~~eai~~  455 (456)
                      |.+|+|++
T Consensus       396 ~~~eai~~  403 (479)
T cd07116         396 DEEEALEI  403 (479)
T ss_pred             CHHHHHHH
Confidence            99999975

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression.

>cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA

Probab=100.00  E-value=1.9e-79  Score=643.75  Aligned_cols=393  Identities=37%  Similarity=0.558  Sum_probs=370.0

Q ss_pred             ccCceeCCEEeeCCCCCeeeeecCCC-CceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 012806           57 YTKNLINGQFVDAASGKTFPVYDPRT-AEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKN  135 (456)
Q Consensus        57 ~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~  135 (456)
                      ..++||||+|+.  ++.+++++||.| |+++++++.++.+|++.+++.|++||+  .|+.++..+|.++|+++++.|+++
T Consensus        32 ~~~~~i~g~~~~--~~~~~~v~~P~t~~~~i~~~~~a~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~  107 (512)
T cd07124          32 EYPLVIGGKEVR--TEEKIESRNPADPSEVLGTVQKATKEEAEAAVQAARAAFP--TWRRTPPEERARLLLRAAALLRRR  107 (512)
T ss_pred             ccceeECCEEec--CCCeEEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHC
Confidence            347899999986  467899999998 999999999999999999999999999  899999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhH
Q 012806          136 MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWK  215 (456)
Q Consensus       136 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~  215 (456)
                      +++|++++++|+|||..+++ .|+..+++.++||+..+.+..+...+...+...+..++|+|||++|+|||||+.+.+++
T Consensus       108 ~~~la~~~~~e~Gk~~~ea~-~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~  186 (512)
T cd07124         108 RFELAAWMVLEVGKNWAEAD-ADVAEAIDFLEYYAREMLRLRGFPVEMVPGEDNRYVYRPLGVGAVISPWNFPLAILAGM  186 (512)
T ss_pred             HHHHHHHHHHHcCcCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEEecceEEEEECCCChHHHHHHHH
Confidence            99999999999999999998 59999999999999998887655444333456789999999999999999999999999


Q ss_pred             HHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHh
Q 012806          216 VAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA  295 (456)
Q Consensus       216 ~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a  295 (456)
                      +++||++||+||+|||+.+|+++..+.+++.++|+|+|++++++|++.+++..|..|+++|.|+||||+.+|+.|.+.++
T Consensus       187 i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa  266 (512)
T cd07124         187 TTAALVTGNTVVLKPAEDTPVIAAKLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAA  266 (512)
T ss_pred             HHHHHHcCCEEEEECCccccHHHHHHHHHHHHhCcCCCceEEeccCchHHHHHHhcCCCCCEEEEeCchHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999988888999999999999999999999999999888


Q ss_pred             hC-----CCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCC
Q 012806          296 KS-----NLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGD  370 (456)
Q Consensus       296 ~~-----~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~  370 (456)
                      +.     +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+
T Consensus       267 ~~~~~~~~l~~~~lElgGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~  346 (512)
T cd07124         267 KVQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDEFLERLVERTKALKVGD  346 (512)
T ss_pred             cccccccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCccccceEEEEcHHHHHHHHHHHHHHHHhCCCCC
Confidence            64     6899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCC--CCceEecEEEecCCCChHhhhc-cccceEEeEEEc
Q 012806          371 PFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGN--RGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILC  447 (456)
Q Consensus       371 p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~--~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~  447 (456)
                      |.|+++++||++++.+++++.++|++++. |+++++||.....  +|+|++|||+.+++++|+.+.+ +||||++|+.++
T Consensus       347 p~d~~~~~Gpli~~~~~~~v~~~i~~a~~-g~~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~  425 (512)
T cd07124         347 PEDPEVYMGPVIDKGARDRIRRYIEIGKS-EGRLLLGGEVLELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAK  425 (512)
T ss_pred             CCCCCCcccCCcCHHHHHHHHHHHHHHHh-CCEEEecCccCCCCCCCceEcCEEEecCCCCChHHhCCCcCCeEEEEecC
Confidence            99999999999999999999999999988 8999999976442  6999999999999999977775 999999999999


Q ss_pred             cccccccc
Q 012806          448 VVTDCTSI  455 (456)
Q Consensus       448 ~~~eai~~  455 (456)
                      +.+|+|++
T Consensus       426 ~~~eai~~  433 (512)
T cd07124         426 DFDEALEI  433 (512)
T ss_pred             CHHHHHHH
Confidence            99999875

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.

>cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like

Probab=100.00  E-value=1.9e-79  Score=638.34  Aligned_cols=389  Identities=42%  Similarity=0.605  Sum_probs=366.5

Q ss_pred             ceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 012806           60 NLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEEL  139 (456)
Q Consensus        60 ~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l  139 (456)
                      +||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+  .|+.+|.++|.++|+++++.|.+++++|
T Consensus         1 ~~i~g~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l   78 (466)
T cd07138           1 FYIDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFP--AWSATSVEERAALLERIAEAYEARADEL   78 (466)
T ss_pred             CeECCEeecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence            58999999876678899999999999999999999999999999999999  9999999999999999999999999999


Q ss_pred             HHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHH
Q 012806          140 AALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPA  219 (456)
Q Consensus       140 a~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~A  219 (456)
                      ++++++|+|||..++...|+..+++.++++++..++......    ....+..++|+|||++|+|||||+.++++++++|
T Consensus        79 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~A  154 (466)
T cd07138          79 AQAITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFEER----RGNSLVVREPIGVCGLITPWNWPLNQIVLKVAPA  154 (466)
T ss_pred             HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccccc----CceEEEEEeecceEEEECCCccHHHHHHHHHHHH
Confidence            999999999999888656999999999999988876544322    2345778999999999999999999999999999


Q ss_pred             hhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCC
Q 012806          220 LTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL  299 (456)
Q Consensus       220 LaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~  299 (456)
                      |++||+||+|||+.+|+++..+.++|+++|+|+|++++++|++.+.+..|..|++++.|.||||+.+|+.|.+.++. ++
T Consensus       155 LaaGN~Vv~Kps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~-~~  233 (466)
T cd07138         155 LAAGCTVVLKPSEVAPLSAIILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAAD-TV  233 (466)
T ss_pred             HhcCCEEEEECCCcCcHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc-cC
Confidence            99999999999999999999999999999999999999999888899999999999999999999999999999988 79


Q ss_pred             ccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccC
Q 012806          300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQG  379 (456)
Q Consensus       300 ~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~G  379 (456)
                      +|+++|+|||+|+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||+++++++|
T Consensus       234 ~~v~lElgG~~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~g  313 (466)
T cd07138         234 KRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAYVVGDPRDPATTLG  313 (466)
T ss_pred             CeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCcCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccC---CCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          380 PQIDPEQFQKVLRYIRSGIESNATLECGGDRLG---NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       380 pli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~---~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      |++++.+++++.++|++++++|+++++||....   ..|+|++|||+.+++++|+.+.+ +||||++|+.++|.+|+|++
T Consensus       314 pli~~~~~~~~~~~v~~a~~~Ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~  393 (466)
T cd07138         314 PLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAI  393 (466)
T ss_pred             ccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCcCCCCceECCEEecCCCCCChHHhCCCCCceEEEeccCCHHHHHHH
Confidence            999999999999999999999999999996422   36899999999999999977776 99999999999999999875

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD.

>cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B

Probab=100.00  E-value=2.9e-79  Score=637.08  Aligned_cols=387  Identities=29%  Similarity=0.512  Sum_probs=359.8

Q ss_pred             eeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHH
Q 012806           61 LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELA  140 (456)
Q Consensus        61 ~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la  140 (456)
                      +|||+|+.  ++++++++||.||+++++++.++.+|+++++++|++||+  .|++++.++|.++|+++++.|++++++|+
T Consensus         2 ~i~g~~~~--~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la   77 (474)
T cd07130           2 VYDGEWGG--GGGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFK--EWRDVPAPKRGEIVRQIGDALRKKKEALG   77 (474)
T ss_pred             eECCEEec--CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            79999986  357899999999999999999999999999999999999  99999999999999999999999999999


Q ss_pred             HHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCC-CCcceEEEeeccceEEEEccCCchHHHHHhHHHHH
Q 012806          141 ALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPA  219 (456)
Q Consensus       141 ~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~A  219 (456)
                      +++++|+|||+.++. .|+..+++.++|+++..+.+.+...+.. .+...+..++|+|||++|+|||||+.++++++++|
T Consensus        78 ~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A  156 (474)
T cd07130          78 KLVSLEMGKILPEGL-GEVQEMIDICDFAVGLSRQLYGLTIPSERPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIA  156 (474)
T ss_pred             HHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHhHHHhcCccccCCCCCceEEEEEecceeEEEEccCCCHHHHHHHHhhHH
Confidence            999999999999987 6999999999999987776655443321 23456788999999999999999999999999999


Q ss_pred             hhcCCEEEEecCCCchHHHHHHHHHH----HHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHh
Q 012806          220 LTCGNTIVLKSAEQTPLTALYVAKLF----HEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA  295 (456)
Q Consensus       220 LaaGN~vvlKps~~~p~~~~~l~~ll----~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a  295 (456)
                      |++||+||+|||+.+|+++..+++++    .++|+|+|++++++|+ .+.+..|+.|+++|+|+||||+++|+.|.+.++
T Consensus       157 LaaGN~VvlKps~~~p~~~~~l~~l~~~~~~~aglP~gv~~~v~g~-~~~~~~L~~~~~vd~V~fTGs~~~g~~i~~~aa  235 (474)
T cd07130         157 LVCGNVVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCGG-ADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVA  235 (474)
T ss_pred             HHcCCeEEeeCCccCHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCC-hhHHHHHhcCCCCCEEEEECchHHHHHHHHHHH
Confidence            99999999999999999998887764    6899999999999994 457899999999999999999999999999988


Q ss_pred             hCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCC
Q 012806          296 KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG  375 (456)
Q Consensus       296 ~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~  375 (456)
                      + +++++++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||++++
T Consensus       236 ~-~~~~~~lElGGk~p~iV~~dadl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~  314 (474)
T cd07130         236 A-RFGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKKAYKQVRIGDPLDDG  314 (474)
T ss_pred             h-cCCCEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEcHhHHHHHHHHHHHHHhcCCcCCCCCCC
Confidence            8 899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEcccccccc
Q 012806          376 VEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTS  454 (456)
Q Consensus       376 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~  454 (456)
                      +++||++++.+++++.++|++++++|+++++||...+.+|+|++|||+.++++ |+.+.+ +||||++|+.+++.+|+|+
T Consensus       315 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~~~~-~~i~~eE~FGPvl~v~~~~~~~eai~  393 (474)
T cd07130         315 TLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEPTIVEGLSD-APIVKEETFAPILYVLKFDTLEEAIA  393 (474)
T ss_pred             CCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEccEEEecCCC-CHHHhCCCcCCeEEEEEeCCHHHHHH
Confidence            99999999999999999999999999999999986555689999999998877 867665 9999999999999999986


Q ss_pred             c
Q 012806          455 I  455 (456)
Q Consensus       455 ~  455 (456)
                      +
T Consensus       394 ~  394 (474)
T cd07130         394 W  394 (474)
T ss_pred             H
Confidence            5

Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer.

>cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like

Probab=100.00  E-value=8.3e-79  Score=634.56  Aligned_cols=394  Identities=41%  Similarity=0.638  Sum_probs=367.5

Q ss_pred             ceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 012806           60 NLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEEL  139 (456)
Q Consensus        60 ~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l  139 (456)
                      +||||+|+.+.++++++++||.||+++++++.++.+|++.++++|++||+.+.|+.++..+|.++|+++++.|++++++|
T Consensus         1 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~el   80 (471)
T cd07139           1 LFIGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPAERAAVLRRLADALEARADEL   80 (471)
T ss_pred             CeECCEeecCCCCCeEEeECCCCCCEeEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence            48999998766678899999999999999999999999999999999998545999999999999999999999999999


Q ss_pred             HHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcc-cCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHH
Q 012806          140 AALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLT-VPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAP  218 (456)
Q Consensus       140 a~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~  218 (456)
                      ++++++|+|||..++...|+..+++.+++|+...++..+.. .+...+...+..++|+|||++|+|||||+.+.++++++
T Consensus        81 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~i~~  160 (471)
T cd07139          81 ARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFEERRPGSGGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAP  160 (471)
T ss_pred             HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCceEEEEEEeccEEEEEcCCchHHHHHHHHHHH
Confidence            99999999999977765699999999999999887665432 22223445688999999999999999999999999999


Q ss_pred             HhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCC
Q 012806          219 ALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN  298 (456)
Q Consensus       219 ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~  298 (456)
                      ||++||+||+|||+.+|+++..+.++|.++|+|+|++++++| +.+.+..|+.|++++.|+||||+.+|+.|.+.+++ +
T Consensus       161 ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g-~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~~~~-~  238 (471)
T cd07139         161 ALAAGCTVVLKPSPETPLDAYLLAEAAEEAGLPPGVVNVVPA-DREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCGE-R  238 (471)
T ss_pred             HHhcCCEEEEECCCcCCHHHHHHHHHHHHcCCCCCcEEEEeC-CHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-c
Confidence            999999999999999999999999999999999999999998 56788999999999999999999999999999888 8


Q ss_pred             CccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCcc
Q 012806          299 LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQ  378 (456)
Q Consensus       299 ~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~  378 (456)
                      ++|+++|+||+||+||++|||+|.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|+++++++
T Consensus       239 ~~~~~lElGG~np~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~  318 (471)
T cd07139         239 LARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEALAAAVAALKVGDPLDPATQI  318 (471)
T ss_pred             CCEEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhCCcCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccC--CCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          379 GPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG--NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       379 Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~--~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      ||++++.+++++.++|++++.+|+++++||....  ..|+|++|||+.+++++|+.+.+ +||||++|+.++|.+|+|++
T Consensus       319 gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~  398 (471)
T cd07139         319 GPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRI  398 (471)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEEecCCCcchHHhCccCCCeEEEeecCCHHHHHHH
Confidence            9999999999999999999999999999997533  35899999999999999977776 99999999999999999975

The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD.

>cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like

Probab=100.00  E-value=4.2e-79  Score=636.56  Aligned_cols=391  Identities=41%  Similarity=0.688  Sum_probs=369.6

Q ss_pred             eeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHH
Q 012806           61 LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELA  140 (456)
Q Consensus        61 ~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la  140 (456)
                      ||||+|+...++++++++||.||+++++++.++.+|++.++++|++|++  .|+.++.++|.++|+++++.|+++.++|+
T Consensus         1 ~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~   78 (468)
T cd07088           1 YINGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQK--AWERLPAIERAAYLRKLADLIRENADELA   78 (468)
T ss_pred             CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence            6999998766788999999999999999999999999999999999999  89999999999999999999999999999


Q ss_pred             HHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCC-CCcceEEEeeccceEEEEccCCchHHHHHhHHHHH
Q 012806          141 ALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPA  219 (456)
Q Consensus       141 ~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~A  219 (456)
                      +++++|+|||..+++ .|+..+++.+++++.++.+..+...+.. .+...+.+++|+|||++|+|||||+...++++++|
T Consensus        79 ~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A  157 (468)
T cd07088          79 KLIVEEQGKTLSLAR-VEVEFTADYIDYMAEWARRIEGEIIPSDRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPA  157 (468)
T ss_pred             HHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhCCccccCccccceeEEEEecceeEEEEccCchHHHHHHHHHHHH
Confidence            999999999999998 6999999999999998887766544432 24456788999999999999999999999999999


Q ss_pred             hhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCC
Q 012806          220 LTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL  299 (456)
Q Consensus       220 LaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~  299 (456)
                      |++||+||+|||+.+|.++..++++|.++|+|+|++++++|++.+.+..|..|+++|+|.||||+.+|+.|.+.+++ ++
T Consensus       158 L~aGN~VVlKps~~~p~~~~~l~~~~~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~-~~  236 (468)
T cd07088         158 LVTGNTIVIKPSEETPLNALEFAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAE-NI  236 (468)
T ss_pred             HHcCCEEEEECCCcchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cC
Confidence            99999999999999999999999999999999999999999777788999999999999999999999999999888 89


Q ss_pred             ccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccC
Q 012806          300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQG  379 (456)
Q Consensus       300 ~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~G  379 (456)
                      +|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+++++++|
T Consensus       237 ~~~~lelGG~~~~iV~~dadl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~g  316 (468)
T cd07088         237 TKVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGDPFDAATDMG  316 (468)
T ss_pred             CcEEEECCCCCeEEECCCCCHHHHHHHHHHHHhcccCcCCcCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccC-CCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          380 PQIDPEQFQKVLRYIRSGIESNATLECGGDRLG-NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       380 pli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~-~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      |++++.+++++.++|++++++|+++++||.... +.|+|++|||+.+++++|+.+.+ +||||++|+.+++.+|+|++
T Consensus       317 pli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~  394 (468)
T cd07088         317 PLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIEL  394 (468)
T ss_pred             cccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceeEcCEEEecCCCCCchhhCCCcCCeEEEEecCCHHHHHHH
Confidence            999999999999999999999999999997643 46899999999999999977765 99999999999999999875

Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD.

>PRK13968 putative succinate semialdehyde dehydrogenase; Provisional

Probab=100.00  E-value=4.9e-79  Score=632.58  Aligned_cols=379  Identities=25%  Similarity=0.397  Sum_probs=354.6

Q ss_pred             CCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCh
Q 012806           72 GKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPY  151 (456)
Q Consensus        72 ~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~  151 (456)
                      .++++++||+||+++++++.++.+|+++++++|++||+  .|+.++.++|.++|+++++.|++++++|++++++|+|||.
T Consensus         6 ~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~   83 (462)
T PRK13968          6 ATHAISVNPATGEQLSVLPWAGADDIENALQLAAAGFR--DWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPI   83 (462)
T ss_pred             CCceEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCH
Confidence            45788999999999999999999999999999999999  9999999999999999999999999999999999999999


Q ss_pred             hhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecC
Q 012806          152 VQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSA  231 (456)
Q Consensus       152 ~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps  231 (456)
                      .+++ .|+..+++.++||+....+..+.......+...++.++|+|||++|+|||||+.++++++++||++||+||+|||
T Consensus        84 ~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~ALaaGN~vv~KPs  162 (462)
T PRK13968         84 NQAR-AEVAKSANLCDWYAEHGPAMLKAEPTLVENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHA  162 (462)
T ss_pred             HHHH-HHHHHHHHHHHHHHHHHHHhhCCccccCCCceEEEEEeccceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECC
Confidence            9998 699999999999998877665433222224456888999999999999999999999999999999999999999


Q ss_pred             CCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCc
Q 012806          232 EQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSP  311 (456)
Q Consensus       232 ~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~  311 (456)
                      +.+|+++..+.+++.++|+|+|++++++|++.+. ..|..|+++|.|+||||+++|+.|.+.++. +++|+++|+|||||
T Consensus       163 ~~tp~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~-~~l~~~~~v~~V~fTGs~~~G~~i~~~aa~-~l~~~~lElGGk~p  240 (462)
T PRK13968        163 PNVMGCAQLIAQVFKDAGIPQGVYGWLNADNDGV-SQMINDSRIAAVTVTGSVRAGAAIGAQAGA-ALKKCVLELGGSDP  240 (462)
T ss_pred             CcChHHHHHHHHHHHHcCcCcCcEEEEecCchhh-HHHhcCCCCCEEEEECCHHHHHHHHHHHhh-cCCcEEEecCCCCc
Confidence            9999999999999999999999999999866544 458899999999999999999999999987 89999999999999


Q ss_pred             eEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHH
Q 012806          312 FIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVL  391 (456)
Q Consensus       312 ~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~  391 (456)
                      +||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||+++..+++++.
T Consensus       241 ~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~  320 (462)
T PRK13968        241 FIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELH  320 (462)
T ss_pred             eEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEECHhHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCCCHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          392 RYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       392 ~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      ++|++++.+|+++++||......|+|++||||.+++++|+.+.+ +||||++|+.|+|.+|+|++
T Consensus       321 ~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~d~~eai~~  385 (462)
T PRK13968        321 HQVEATLAEGARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHALEL  385 (462)
T ss_pred             HHHHHHHHCCCEEEeCCCcCCCCceEECCEEEeCCCCCChHHhCCCcCCEEEEEEECCHHHHHHH
Confidence            99999999999999999764446899999999999999977765 99999999999999999875

>TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative

Probab=100.00  E-value=9e-79  Score=638.03  Aligned_cols=394  Identities=32%  Similarity=0.485  Sum_probs=367.8

Q ss_pred             CccCceeCCEEeeCCCCCeeeeecCC-CCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 012806           56 SYTKNLINGQFVDAASGKTFPVYDPR-TAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK  134 (456)
Q Consensus        56 ~~~~~~I~G~~~~~~~~~~~~v~~P~-tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~  134 (456)
                      ...++||||+|+.+  +.++.++||. ||+++++++.++.+|++.+++.|++|++  .|++++.++|.++|+++++.|++
T Consensus        31 ~~~~~~i~g~~~~~--~~~~~~~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~  106 (511)
T TIGR01237        31 KTYPLYINGEYVET--ENKIDSINPCDPSEVVGKVGKASVEQAEHALQIAKKAFE--AWKKTPVRERAGILRKAAAIMER  106 (511)
T ss_pred             cccceeECCEEecC--CCeEEeECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHH
Confidence            34478999999863  5679999999 5999999999999999999999999999  99999999999999999999999


Q ss_pred             hHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCC-CCCcceEEEeeccceEEEEccCCchHHHHH
Q 012806          135 NMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFT  213 (456)
Q Consensus       135 ~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~  213 (456)
                      ++++|++++++|+|||..++. .|+..+++.++||++.+.+..+...+. ..+...++.++|+|||++|+|||||+..++
T Consensus       107 ~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~  185 (511)
T TIGR01237       107 RRHELNALICLEVGKIIPEAD-AEVAEAIDFCEYYAREMERLAGQGVNLDIEGETNRYFYQPRGVAVVISPWNFPMAIAV  185 (511)
T ss_pred             CHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceeEEEECCCCcHHHHHH
Confidence            999999999999999999987 599999999999999988776644322 234457888999999999999999999999


Q ss_pred             hHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHH
Q 012806          214 WKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQEL  293 (456)
Q Consensus       214 ~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~  293 (456)
                      +++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+.+..|+.|++++.|.||||+.+|+.|.+.
T Consensus       186 ~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~  265 (511)
T TIGR01237       186 GMTVAPIVTGNCVVLKPAETSTVIAAKIVEILIEAGLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTGSREVGCRIYED  265 (511)
T ss_pred             HHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEccCCCchhHHHHhcCCCCCeEEEECchHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999878899999999999999999999999999998


Q ss_pred             Hhh-----CCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhc
Q 012806          294 AAK-----SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIV  368 (456)
Q Consensus       294 ~a~-----~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~  368 (456)
                      ++.     .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++
T Consensus       266 aa~~~~~~~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~  345 (511)
T TIGR01237       266 AAKVQPGQKHLKRVIAEMGGKDAIIVDESADIEQAVAGAVYSAFGFTGQKCSACSRVVVLSPVYDAVVERFVEATRSLNV  345 (511)
T ss_pred             HhcccccccccceeEeccCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccceEEEEehhHHHHHHHHHHHHHHhCCC
Confidence            873     378999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEc
Q 012806          369 GDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILC  447 (456)
Q Consensus       369 g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~  447 (456)
                      |+|.++++++||++++++++++.++|++++++| ++++||....+.|+|++|||+.+++++|+.+.+ +||||++|+.++
T Consensus       346 g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~g-~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPVl~v~~~~  424 (511)
T TIGR01237       346 GPTDDPSTQVGPVIDQKSQAKIQEYIEQGKAEG-ELAIGGCDAPSEGYFIGPTIFKDVDRHARLAQEEIFGPVVAIIRAA  424 (511)
T ss_pred             CCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCC-cEEECCccCCCCCeEEcCEEEeCCCCCChHhhCCCcCCeEEEEeeC
Confidence            999999999999999999999999999999999 788998764456899999999999999977775 999999999999


Q ss_pred             cccccccc
Q 012806          448 VVTDCTSI  455 (456)
Q Consensus       448 ~~~eai~~  455 (456)
                      +.+|+|++
T Consensus       425 ~~deai~~  432 (511)
T TIGR01237       425 DFDEALEI  432 (511)
T ss_pred             CHHHHHHH
Confidence            99999875

This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs.

>cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like

Probab=100.00  E-value=1.3e-78  Score=634.20  Aligned_cols=392  Identities=44%  Similarity=0.726  Sum_probs=368.9

Q ss_pred             ceeCCEEeeCCCCCeeeeecCCC-CceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 012806           60 NLINGQFVDAASGKTFPVYDPRT-AEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEE  138 (456)
Q Consensus        60 ~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~  138 (456)
                      +||||+|+.+.++++++++||.| ++++++++.++.+|+++++++|++|++  .|+.++.++|.++|+++++.|.+++++
T Consensus         1 ~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~l~~~a~~l~~~~~e   78 (478)
T cd07131           1 NYIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFP--EWRKVPAPRRAEYLFRAAELLKKRKEE   78 (478)
T ss_pred             CcCCCEeecCCCCCeEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence            58999999766678999999999 689999999999999999999999999  899999999999999999999999999


Q ss_pred             HHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCC-CCcceEEEeeccceEEEEccCCchHHHHHhHHH
Q 012806          139 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVA  217 (456)
Q Consensus       139 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~  217 (456)
                      |++++++|+|||..+++ .|+..+++.++|++...++..+...+.. .+...+.+++|+|||++|+|||||+.+++++++
T Consensus        79 la~~~~~e~Gk~~~~~~-~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~  157 (478)
T cd07131          79 LARLVTREMGKPLAEGR-GDVQEAIDMAQYAAGEGRRLFGETVPSELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIF  157 (478)
T ss_pred             HHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhCCcccccCCCCceEEEEeeceeEEEEECCcCcHHHHHHHHHH
Confidence            99999999999999988 5999999999999998877665544321 234578899999999999999999999999999


Q ss_pred             HHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhC
Q 012806          218 PALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKS  297 (456)
Q Consensus       218 ~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~  297 (456)
                      +||++||+||+|||+.+|+++..++++|.++|+|+|++++++|++.+.+..|..|+++|+|+||||+.+|+.|.+.+++ 
T Consensus       158 ~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~-  236 (478)
T cd07131         158 PALVCGNTVVFKPAEDTPACALKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCAR-  236 (478)
T ss_pred             HHHHcCCEEEEECCCcCcHHHHHHHHHHHhcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-
Confidence            9999999999999999999999999999999999999999999877789999999999999999999999999999988 


Q ss_pred             CCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCc
Q 012806          298 NLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVE  377 (456)
Q Consensus       298 ~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~  377 (456)
                      +++|+++|+||++|+||++|||+|.|++.+++++|+|+||.|++++|||||+++|++|+++|+++++++++|+|.+++++
T Consensus       237 ~~~~~~lelgG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~  316 (478)
T cd07131         237 PNKRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKRFVERAKRLRVGDGLDEETD  316 (478)
T ss_pred             cCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhhHHHHHHHHHHHHHhcCCCCCCCCCCc
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccC----CCCceEecEEEecCCCChHhhhc-cccceEEeEEEcccccc
Q 012806          378 QGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG----NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDC  452 (456)
Q Consensus       378 ~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~----~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~ea  452 (456)
                      +||++++.+++++.++|++++++|+++++||....    .+|+|++|||+.+++++|+.+.+ +||||++|+.++|.+|+
T Consensus       317 ~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~~ea  396 (478)
T cd07131         317 MGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEA  396 (478)
T ss_pred             CCcCCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEeCCCCCChHhhCCCcCCeEEEEEeCCHHHH
Confidence            99999999999999999999999999999997532    46899999999999999977765 99999999999999999


Q ss_pred             ccc
Q 012806          453 TSI  455 (456)
Q Consensus       453 i~~  455 (456)
                      |++
T Consensus       397 i~~  399 (478)
T cd07131         397 IEI  399 (478)
T ss_pred             HHH
Confidence            875

Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD.

>TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase

Probab=100.00  E-value=2.6e-78  Score=631.51  Aligned_cols=390  Identities=30%  Similarity=0.405  Sum_probs=361.0

Q ss_pred             ceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 012806           60 NLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEEL  139 (456)
Q Consensus        60 ~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l  139 (456)
                      +||||+|+.+ ++++++++||.||+++++++.++.+|+++++++|++||+  .|+.++.++|.++|+++++.|++++++|
T Consensus         1 ~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el   77 (484)
T TIGR03240         1 LFIDGKWRAG-QGESFSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFP--AWARLSLEERIAVVQRFAALLEERKEAL   77 (484)
T ss_pred             CeECCEEecC-CCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHhHHHH
Confidence            5899999864 578899999999999999999999999999999999999  9999999999999999999999999999


Q ss_pred             HHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHH
Q 012806          140 AALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPA  219 (456)
Q Consensus       140 a~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~A  219 (456)
                      ++++++|+|||..++. .|+..+++.+++++....+..+.......+...++.++|+|||++|+|||||+..+++++++|
T Consensus        78 a~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~A  156 (484)
T TIGR03240        78 ARVIARETGKPLWETR-TEVASMIGKVAISIKAYHERTGESENPMPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPA  156 (484)
T ss_pred             HHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEEecccEEEEECCCchHHHHHHHHHHHH
Confidence            9999999999999987 699999999999888776665544322223456788999999999999999999999999999


Q ss_pred             hhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCC
Q 012806          220 LTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL  299 (456)
Q Consensus       220 LaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~  299 (456)
                      |++||+||+|||+.+|+++..++++++++|+|+|++++|+| +.+.+..|+.|+++|+|+||||+++|+.|.+.+++...
T Consensus       157 LaaGN~VVlKPs~~tp~t~~~l~~~~~~aGlP~gvv~~v~g-~~~~~~~L~~~~~vd~V~fTGS~~~G~~i~~~aa~~~~  235 (484)
T TIGR03240       157 LLAGNTVVFKPSELTPWVAEETVKLWEKAGLPAGVLNLVQG-ARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRPE  235 (484)
T ss_pred             HHcCCEEEEECCccccHHHHHHHHHHHHhCcCcccEEEEeC-CHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhcCC
Confidence            99999999999999999999999999999999999999999 56788999999999999999999999999998876457


Q ss_pred             ccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCccccccccc-HHHHHHHHHHHHhhhhcCCC-CCCCCc
Q 012806          300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERV-YDEFVEKAKARAMRRIVGDP-FKSGVE  377 (456)
Q Consensus       300 ~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v-~~~f~~~l~~~~~~~~~g~p-~~~~~~  377 (456)
                      +++++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++ +|+|+++|++.++++++|+| .+++++
T Consensus       236 ~~~~lElGGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~~  315 (484)
T TIGR03240       236 KILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLARLVEVAERLTVGAWDAEPQPF  315 (484)
T ss_pred             CcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeccccHHHHHHHHHHHHHhcccCCCCcCCCCc
Confidence            8899999999999999999999999999999999999999999999999998 59999999999999999997 578889


Q ss_pred             cCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          378 QGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       378 ~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      +||++++++++++.++|++++++|+++++||...++.|+|++|||+ +++++|+.+.+ +||||++|+.+++.+|+|++
T Consensus       316 ~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~i~PTvl-~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~  393 (484)
T TIGR03240       316 MGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPGAALLTPGII-DVTGVAELPDEEHFGPLLQVIRYDDFDEAIAI  393 (484)
T ss_pred             ccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCEEEcCEEE-ccCCCCHHHhCCCcCCeEEEEEeCCHHHHHHH
Confidence            9999999999999999999999999999988754456899999999 79999976665 99999999999999999875

Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism.

>cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase

Probab=100.00  E-value=1.5e-78  Score=632.66  Aligned_cols=387  Identities=26%  Similarity=0.296  Sum_probs=349.5

Q ss_pred             CceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHh-cccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 012806           59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKA-FDEGPWPKMTPYERSRIMLRAADLIEKNME  137 (456)
Q Consensus        59 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a-~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~  137 (456)
                      ++||||+|+.+ ++++++++||.||+++++++.++ +|+++||++|++| |+  .|+.++..+|.++|+++++.|+++++
T Consensus         2 ~~~I~g~~~~~-~~~~~~~~nP~tg~~~~~~~~~~-~dv~~Av~~A~~A~~~--~W~~~~~~~Ra~~L~~~a~~l~~~~~   77 (513)
T cd07128           2 QSYVAGQWHAG-TGDGRTLHDAVTGEVVARVSSEG-LDFAAAVAYAREKGGP--ALRALTFHERAAMLKALAKYLMERKE   77 (513)
T ss_pred             ceeECCEEEcC-CCCEEEeECCCCCCEEEEEcCCH-HHHHHHHHHHHHhhhc--hhhcCCHHHHHHHHHHHHHHHHHHHH
Confidence            67999999865 46789999999999999999865 8999999999997 68  89999999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcC--------cccCCCC-C-cceEEEeec-cceEEEEccCC
Q 012806          138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG--------LTVPGDG-N-YHIQTLHEP-IGVAGQIVPWN  206 (456)
Q Consensus       138 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~--------~~~~~~~-~-~~~~~~~~P-~Gvv~~i~p~N  206 (456)
                      +|+++ +.|+|||+.+++ .|+..+++.++||++.+++..+        +..+... + ...++.++| +|||++|+|||
T Consensus        78 ~la~l-~~e~Gkp~~ea~-~Ev~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN  155 (513)
T cd07128          78 DLYAL-SAATGATRRDSW-IDIDGGIGTLFAYASLGRRELPNAHFLVEGDVEPLSKDGTFVGQHILTPRRGVAVHINAFN  155 (513)
T ss_pred             HHHHH-HHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHhhccccccccCCcccccCCCccccceEEEEecccEEEEECCcc
Confidence            99996 899999999998 6999999999999998877542        2222211 1 235678999 59999999999


Q ss_pred             chHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcC-CCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChh
Q 012806          207 FPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAG-LPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCD  285 (456)
Q Consensus       207 ~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aG-lP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~  285 (456)
                      ||+.++++++++||++||+||+|||+.+|+++..+++++.++| +|+|++|+|+|++.+++..|   +.+|+|.||||++
T Consensus       156 ~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaG~lP~gv~~~v~g~~~~~~~~l---~~~d~v~fTGS~~  232 (513)
T cd07128         156 FPVWGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVESGLLPEGALQLICGSVGDLLDHL---GEQDVVAFTGSAA  232 (513)
T ss_pred             cHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCCCCCCcEEEecCChHHHhccc---CCCCEEEEECCHH
Confidence            9999999999999999999999999999999999999999999 99999999998654444333   5789999999999


Q ss_pred             HHHHHHHHHh-hCCCccEEEecCCCCceEEcCCCC-----HHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHH
Q 012806          286 TGKIVQELAA-KSNLKPVTLELGGKSPFIIFDDAD-----VDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA  359 (456)
Q Consensus       286 ~g~~i~~~~a-~~~~~~v~lelgG~~~~iV~~daD-----~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l  359 (456)
                      +|+.|.+.++ ..+++|+++|+|||||+||++|||     +|.+++.+++++|.|+||.|++++|+|||+++|++|+++|
T Consensus       233 ~G~~i~~~a~~a~~~~~~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l  312 (513)
T cd07128         233 TAAKLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAFVPEARVDAVIEAL  312 (513)
T ss_pred             HHHHHHHHhhhhccCceEEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHHHhcCCcccCCceEEEehHHHHHHHHHH
Confidence            9999999853 237899999999999999999999     9999999999999999999999999999999999999999


Q ss_pred             HHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCccc-------CCCCceEecEEEecCCCC--h
Q 012806          360 KARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRL-------GNRGYFVQPTVFSDVTVS--F  430 (456)
Q Consensus       360 ~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~-------~~~g~~i~PtVl~~v~~~--~  430 (456)
                      +++++++++|||+++++++||++++.+++++.++|++++++ |++++||...       .+.|+|++||||.+++++  |
T Consensus       313 ~~~~~~l~~G~p~~~~~~lGpli~~~~~~~i~~~i~~a~~~-A~vl~GG~~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~  391 (513)
T cd07128         313 KARLAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAE-AEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDAAT  391 (513)
T ss_pred             HHHHHhcccCCCccCCCCcCCCCCHHHHHHHHHHHHHHHhC-CEEEECCCccccccCCCCCCCEEECCEEEeccCCcccc
Confidence            99999999999999999999999999999999999999988 9999999652       135899999999999874  7


Q ss_pred             Hhhhc-cccceEEeEEEccccccccc
Q 012806          431 ISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       431 ~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      +.+.+ +||||++|+.+++.+|+|++
T Consensus       392 ~i~~eE~FGPVl~V~~~~~~deai~~  417 (513)
T cd07128         392 AVHDVEAFGPVATLMPYDSLAEAIEL  417 (513)
T ss_pred             hHHhCCCcCCeEEEEeeCCHHHHHHH
Confidence            55654 99999999999999999875

The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH.

>cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like

Probab=100.00  E-value=2.4e-78  Score=633.71  Aligned_cols=394  Identities=33%  Similarity=0.524  Sum_probs=368.1

Q ss_pred             CCccCceeCCEEeeCCCCCeeeeecCC-CCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 012806           55 ISYTKNLINGQFVDAASGKTFPVYDPR-TAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIE  133 (456)
Q Consensus        55 ~~~~~~~I~G~~~~~~~~~~~~v~~P~-tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~  133 (456)
                      +...++||||+|+.  ++.+++++||. ||+++++++.++.+|+++++++|++||+  .|+.++.++|.++|+++++.|+
T Consensus        16 ~~~~~~~i~g~~~~--~~~~~~~~~P~~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~   91 (500)
T cd07083          16 GRAYPLVIGGEWVD--TKERMVSVSPFAPSEVVGTTAKADKAEAEAALEAAWAAFK--TWKDWPQEDRARLLLKAADLLR   91 (500)
T ss_pred             cccccceECCEEec--CCCceEeeCCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHH
Confidence            34557899999986  46789999998 6999999999999999999999999999  9999999999999999999999


Q ss_pred             HhHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCccc--CCCCCcceEEEeeccceEEEEccCCchHHH
Q 012806          134 KNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTV--PGDGNYHIQTLHEPIGVAGQIVPWNFPLLL  211 (456)
Q Consensus       134 ~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~  211 (456)
                      +++++|++++++|+|||..++. .|+..+++.++||++.+.+..+...  +...+...++.++|+|||++|+|||||+.+
T Consensus        92 ~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~  170 (500)
T cd07083          92 RRRRELIATLTYEVGKNWVEAI-DDVAEAIDFIRYYARAALRLRYPAVEVVPYPGEDNESFYVGLGAGVVISPWNFPVAI  170 (500)
T ss_pred             hCHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCCceEEEEEeccceEEEEcCCccHHHH
Confidence            9999999999999999999986 6999999999999999887765532  222345678889999999999999999999


Q ss_pred             HHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHH
Q 012806          212 FTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQ  291 (456)
Q Consensus       212 ~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~  291 (456)
                      .++++++||++||+||+|||+.+|+++..+++++.++|+|+|++++++|++.+.+..|+.|+++|.|+||||+.+|+.|.
T Consensus       171 ~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~v~  250 (500)
T cd07083         171 FTGMIVAPVAVGNTVIAKPAEDAVVVGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIY  250 (500)
T ss_pred             HHHHHHHHHHcCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCceEEEeCCCchhHHHHhcCCCcCEEEEECcHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999998888999999999999999999999999999


Q ss_pred             HHHhhCCC------ccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhh
Q 012806          292 ELAAKSNL------KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMR  365 (456)
Q Consensus       292 ~~~a~~~~------~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~  365 (456)
                      +.+++ ++      +|+++|+|||||+||++|+|+|.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++
T Consensus       251 ~~aa~-~~~~~~~~~~v~lElgG~~~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~  329 (500)
T cd07083         251 EAAAR-LAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAYEPVLERLLKRAER  329 (500)
T ss_pred             HHHhh-ccccccccCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHc
Confidence            99887 54      999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeE
Q 012806          366 RIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFI  444 (456)
Q Consensus       366 ~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv  444 (456)
                      +++|||.++++++||++++.+++++.++|++++.+| ++++||....+.|+|++|||+.+++++|+.+.+ +||||++|+
T Consensus       330 ~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~g-~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~  408 (500)
T cd07083         330 LSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVI  408 (500)
T ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC-EEEeCCCcCCCCCeEEccEEEeCCCCCChHhhCCCCCceEEEE
Confidence            999999999999999999999999999999999887 999999765556899999999999999977765 999999999


Q ss_pred             EEc--cccccccc
Q 012806          445 ILC--VVTDCTSI  455 (456)
Q Consensus       445 ~~~--~~~eai~~  455 (456)
                      .++  +.+|+|++
T Consensus       409 ~~~d~~~~eai~~  421 (500)
T cd07083         409 RYKDDDFAEALEV  421 (500)
T ss_pred             EeCCCCHHHHHHH
Confidence            999  88999864

ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH.

>cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like

Probab=100.00  E-value=1.8e-78  Score=630.11  Aligned_cols=386  Identities=42%  Similarity=0.725  Sum_probs=363.4

Q ss_pred             CccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 012806           56 SYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKN  135 (456)
Q Consensus        56 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~  135 (456)
                      ...++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+  .|++++.++|.++|+++++.|.++
T Consensus        20 ~~~~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~a~~~~v~~ai~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~   97 (480)
T cd07111          20 RSFGHFINGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFE--SWSALPGHVRARHLYRIARHIQKH   97 (480)
T ss_pred             ccccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHh
Confidence            345789999999766678899999999999999999999999999999999999  999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhH
Q 012806          136 MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWK  215 (456)
Q Consensus       136 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~  215 (456)
                      +++|++++++|+|||..+++..|+..+++.+++++++.+...+          .+..++|+|||++|+|||||+.+.+++
T Consensus        98 ~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~----------~~~~~~P~GVV~~I~PwN~P~~~~~~~  167 (480)
T cd07111          98 QRLFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQLLDT----------ELAGWKPVGVVGQIVPWNFPLLMLAWK  167 (480)
T ss_pred             HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC----------CcccceecceEEEECCCccHHHHHHHH
Confidence            9999999999999999998756999999999999888765432          134579999999999999999999999


Q ss_pred             HHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHh
Q 012806          216 VAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA  295 (456)
Q Consensus       216 ~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a  295 (456)
                      +++||++||+||+|||+.+|.++..++++++++|+|+|++++|+|++ +.+..|..|+++|.|+||||+.+|+.|.+.++
T Consensus       168 i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~-~~~~~l~~~~~v~~v~ftGs~~~g~~v~~~aa  246 (480)
T cd07111         168 ICPALAMGNTVVLKPAEYTPLTALLFAEICAEAGLPPGVLNIVTGNG-SFGSALANHPGVDKVAFTGSTEVGRALRRATA  246 (480)
T ss_pred             HHHHHHcCCEEEEECCCCChHHHHHHHHHHHhcCCCcccEEEEeCCc-hHHHHHhcCCCcCEEEEECCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999865 67899999999999999999999999999988


Q ss_pred             hCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCC
Q 012806          296 KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG  375 (456)
Q Consensus       296 ~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~  375 (456)
                      + +++|+++|+|||+|+||++|+|+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|++++
T Consensus       247 ~-~~~~~~lElGGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~  325 (480)
T cd07111         247 G-TGKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKLKERMSHLRVGDPLDKA  325 (480)
T ss_pred             c-cCCcEEEEcCCCceEEECCCCCHHHHHHHHHHHHHhcCCCcCcCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence            8 899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEcccccccc
Q 012806          376 VEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTS  454 (456)
Q Consensus       376 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~  454 (456)
                      +++||++++.+++++.++|++++++|+++++||....++|+|++|||+.+++++|+.+.+ +||||++|+.++|.+|+|+
T Consensus       326 ~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~  405 (480)
T cd07111         326 IDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAVA  405 (480)
T ss_pred             CccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcCCCCCCeeEeecCCCHHHHHH
Confidence            999999999999999999999999999999998754457999999999999999977775 9999999999999999987


Q ss_pred             c
Q 012806          455 I  455 (456)
Q Consensus       455 ~  455 (456)
                      +
T Consensus       406 ~  406 (480)
T cd07111         406 L  406 (480)
T ss_pred             H
Confidence            5

Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence.

>PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-78  Score=634.56  Aligned_cols=393  Identities=34%  Similarity=0.543  Sum_probs=366.0

Q ss_pred             CccCceeCCEEeeCCCCCeeeeecCC-CCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 012806           56 SYTKNLINGQFVDAASGKTFPVYDPR-TAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK  134 (456)
Q Consensus        56 ~~~~~~I~G~~~~~~~~~~~~v~~P~-tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~  134 (456)
                      ...++||||+|+.  ++.+++++||+ ||+++++++.++.+|++++++.|++||+  .|+.++.++|.++|+++++.|.+
T Consensus        35 ~~~~~~i~g~~~~--~~~~~~~~~P~~t~~~i~~~~~a~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~  110 (514)
T PRK03137         35 QDYPLIIGGERIT--TEDKIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFE--TWKKWSPEDRARILLRAAAIIRR  110 (514)
T ss_pred             cccceeECCEEec--CCCeeEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHH
Confidence            3447899999986  46789999999 6999999999999999999999999999  99999999999999999999999


Q ss_pred             hHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhc-CcccCCCCCcceEEEeeccceEEEEccCCchHHHHH
Q 012806          135 NMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH-GLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFT  213 (456)
Q Consensus       135 ~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~  213 (456)
                      +.++|++++++|+|||..+++ .|+..+++.++||++.+.+.. +.......+...++.++|+|||++|+|||||+..++
T Consensus       111 ~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~g~~~~~~~~P~GVv~~I~PwN~P~~~~~  189 (514)
T PRK03137        111 RKHEFSAWLVKEAGKPWAEAD-ADTAEAIDFLEYYARQMLKLADGKPVESRPGEHNRYFYIPLGVGVVISPWNFPFAIMA  189 (514)
T ss_pred             CHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccccCCCCceEEEEEecCcEEEEECCCccHHHHHH
Confidence            999999999999999999998 599999999999999887764 222222234467889999999999999999999999


Q ss_pred             hHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHH
Q 012806          214 WKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQEL  293 (456)
Q Consensus       214 ~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~  293 (456)
                      +++++||++||+||+|||+.+|+++..+.+++.++|+|+|++++++|++.+.++.|..|++++.|+||||+.+|+.|.+.
T Consensus       190 ~~i~~ALaaGN~VVlKPs~~tp~~a~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~  269 (514)
T PRK03137        190 GMTLAAIVAGNTVLLKPASDTPVIAAKFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYER  269 (514)
T ss_pred             HHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEeecCchHHHHHHhcCCCcCEEEEECCcHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999878889999999999999999999999999998


Q ss_pred             HhhC-----CCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhc
Q 012806          294 AAKS-----NLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIV  368 (456)
Q Consensus       294 ~a~~-----~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~  368 (456)
                      +++.     ++||+++|+|||+|+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus       270 aa~~~~~~~~l~~v~lElgGk~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~  349 (514)
T PRK03137        270 AAKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVYDEVLEKVVELTKELTV  349 (514)
T ss_pred             HhcccccccccceEEecCCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCccCeEEEEeHHHHHHHHHHHHHHHHhCCC
Confidence            8752     68999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEc
Q 012806          369 GDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILC  447 (456)
Q Consensus       369 g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~  447 (456)
                      |+|.++. ++||++++.+++++.++|++++.+ +++++||......|+|++|||+.+++++|+.+.+ +||||++|+.++
T Consensus       350 g~p~~~~-~~Gpli~~~~~~~v~~~v~~a~~~-~~vl~Gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~  427 (514)
T PRK03137        350 GNPEDNA-YMGPVINQASFDKIMSYIEIGKEE-GRLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAK  427 (514)
T ss_pred             CCCCCcc-CcCCCCCHHHHHHHHHHHHHHHhC-CEEEeCCCcCCCCceEEeeEEEeCCCCCCHHHhCCCCCceEEEEecC
Confidence            9999998 999999999999999999999887 5999999765557999999999999999977775 999999999999


Q ss_pred             cccccccc
Q 012806          448 VVTDCTSI  455 (456)
Q Consensus       448 ~~~eai~~  455 (456)
                      +.+|+|++
T Consensus       428 ~~~eai~~  435 (514)
T PRK03137        428 DFDHALEI  435 (514)
T ss_pred             CHHHHHHH
Confidence            99999875

>PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed

Probab=100.00  E-value=2e-78  Score=627.15  Aligned_cols=376  Identities=32%  Similarity=0.501  Sum_probs=353.5

Q ss_pred             eeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhh
Q 012806           75 FPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQS  154 (456)
Q Consensus        75 ~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a  154 (456)
                      ++++||.||+++++++.++.+|++.++++|++||+  .|+.++.++|.++|+++++.|++++++|++++++|+|||+.++
T Consensus         3 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a   80 (457)
T PRK09406          3 IATINPATGETVKTFTALTDDEVDAAIARAHARFR--DYRTTTFAQRARWANAAADLLEAEADQVAALMTLEMGKTLASA   80 (457)
T ss_pred             eeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHHHH
Confidence            67889999999999999999999999999999999  9999999999999999999999999999999999999999999


Q ss_pred             hhccHHHHHHHHHHHHHhhhHhcCcccCC---CCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecC
Q 012806          155 LKSEVPMVVRLLHYYAGWADKIHGLTVPG---DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSA  231 (456)
Q Consensus       155 ~~~ev~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps  231 (456)
                      . .|+..+++.++||+..+.+..+.....   .++...++.++|+|||++|+|||||+.++++++++||++||+||+|||
T Consensus        81 ~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~ALaaGN~VV~Kps  159 (457)
T PRK09406         81 K-AEALKCAKGFRYYAEHAEALLADEPADAAAVGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHA  159 (457)
T ss_pred             H-HHHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEecceeEEEECCccchHHHHHHHHHHHHHcCCEEEEECC
Confidence            7 599999999999999887766543221   123456888999999999999999999999999999999999999999


Q ss_pred             CCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCc
Q 012806          232 EQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSP  311 (456)
Q Consensus       232 ~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~  311 (456)
                      +.+|+++..+.+++.++|+|+|+++++++ +...+..|+.|+++++|+||||+.+|+.|.+.+++ ++||+++|+|||||
T Consensus       160 ~~~p~~~~~l~~l~~~aGlP~gvv~~v~~-g~~~~~~l~~~~~i~~V~fTGs~~~G~~i~~~a~~-~~~~~~lElGG~~~  237 (457)
T PRK09406        160 SNVPQTALYLADLFRRAGFPDGCFQTLLV-GSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGD-EIKKTVLELGGSDP  237 (457)
T ss_pred             CcCcHHHHHHHHHHHHhCCCcCcEEEEcC-CchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHHh-cCCceeeecCCCCe
Confidence            99999999999999999999999999986 44567889999999999999999999999999888 89999999999999


Q ss_pred             eEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHH
Q 012806          312 FIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVL  391 (456)
Q Consensus       312 ~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~  391 (456)
                      +||++|||+|.+++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.|+++++||++++.+++++.
T Consensus       238 ~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~  317 (457)
T PRK09406        238 FIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDEVE  317 (457)
T ss_pred             eEECCCCCHHHHHHHHHHHHhhCCCCcccCCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCcCHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          392 RYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       392 ~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      ++|++++++|+++++||...+..|+|++|||+.+++++|+.+.+ +||||++|+.++|.+|+|++
T Consensus       318 ~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~  382 (457)
T PRK09406        318 KQVDDAVAAGATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEI  382 (457)
T ss_pred             HHHHHHHHCCCEEEeCCCcCCCCCceEccEEeecCCCCCHHhhCCCCCceEEEEeeCCHHHHHHH
Confidence            99999999999999999875557999999999999999977765 99999999999999999875

>cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like

Probab=100.00  E-value=3.1e-78  Score=628.72  Aligned_cols=385  Identities=38%  Similarity=0.600  Sum_probs=362.9

Q ss_pred             CEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 012806           64 GQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALE  143 (456)
Q Consensus        64 G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~  143 (456)
                      |+|+.+.++.+++++||.||+++++++.++.+|+++++++|++|++  .|++++..+|.++|+++++.|++++++|++++
T Consensus         1 g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~   78 (465)
T cd07151           1 GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQK--EWAATLPQERAEILEKAAQILEERRDEIVEWL   78 (465)
T ss_pred             CCceeCCCCCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence            6788766678899999999999999999999999999999999999  89999999999999999999999999999999


Q ss_pred             HHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCC-CCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhc
Q 012806          144 TWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTC  222 (456)
Q Consensus       144 ~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaa  222 (456)
                      ++|+|||..++. .|+..+++.++|++...++..+...+.. .+...++.++|+|||++|+|||||+.+.++++++||++
T Consensus        79 ~~e~Gk~~~~a~-~Ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaa  157 (465)
T cd07151          79 IRESGSTRIKAN-IEWGAAMAITREAATFPLRMEGRILPSDVPGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPALAL  157 (465)
T ss_pred             HHHcCCCHHHHH-HHHHHHHHHHHHHHHhHHHhcCccccCCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHc
Confidence            999999999987 5999999999999988877665544322 24456788999999999999999999999999999999


Q ss_pred             CCEEEEecCCCchHHH-HHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCcc
Q 012806          223 GNTIVLKSAEQTPLTA-LYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKP  301 (456)
Q Consensus       223 GN~vvlKps~~~p~~~-~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~  301 (456)
                      ||+||+|||+.+|.++ ..+.+++.++|+|+|++++++|++.+.+..|+.|+.+++|.||||+.+|+.|.+.+++ +++|
T Consensus       158 GN~Vi~Kps~~~p~~~~~~l~~~l~~aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~-~~~~  236 (465)
T cd07151         158 GNAVVLKPASDTPITGGLLLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGR-HLKK  236 (465)
T ss_pred             CCEEEEECCCCCcHhHHHHHHHHHHHcCcCccceEEEecCchhhHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCc
Confidence            9999999999999996 7899999999999999999999878889999999999999999999999999999988 8999


Q ss_pred             EEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCC
Q 012806          302 VTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQ  381 (456)
Q Consensus       302 v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpl  381 (456)
                      +++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||+
T Consensus       237 ~~lElGGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl  316 (465)
T cd07151         237 VALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKFVERVKALPYGDPSDPDTVVGPL  316 (465)
T ss_pred             EEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          382 IDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       382 i~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      +++++++++.++|++++++|+++++||..   .|+|++|||+.+++++|+.+.+ +||||++|+.++|.+|+|++
T Consensus       317 i~~~~~~~v~~~v~~a~~~ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~  388 (465)
T cd07151         317 INESQVDGLLDKIEQAVEEGATLLVGGEA---EGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALEL  388 (465)
T ss_pred             cCHHHHHHHHHHHHHHHhCCCEEEecCCc---CCEEEccEEEeCCCCCCchhhCcCcCCeEEEEeeCCHHHHHHH
Confidence            99999999999999999999999999964   5899999999999999977775 99999999999999999875

NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD.

>TIGR01780 SSADH succinate-semialdehyde dehydrogenase

Probab=100.00  E-value=2.5e-78  Score=626.56  Aligned_cols=375  Identities=38%  Similarity=0.637  Sum_probs=355.0

Q ss_pred             eecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhh
Q 012806           77 VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLK  156 (456)
Q Consensus        77 v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~  156 (456)
                      ++||.||+++++++.++.+|++.++++|++|++  .|+.++.++|.++|+++++.|++++++|++++++|+|||..+++ 
T Consensus         1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-   77 (448)
T TIGR01780         1 VYNPATGEIIGTVPDQGVEEAEAAIRAAYEAFK--TWKNTTAKERSSLLRKWYNLMMENKDDLARLITLENGKPLKEAK-   77 (448)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-
Confidence            469999999999999999999999999999999  99999999999999999999999999999999999999999998 


Q ss_pred             ccHHHHHHHHHHHHHhhhHhcCcccCCC-CCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCch
Q 012806          157 SEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTP  235 (456)
Q Consensus       157 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p  235 (456)
                      .|+..+++.++|++....+..+...+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus        78 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p  157 (448)
T TIGR01780        78 GEILYAASFLEWFAEEAKRVYGDTIPSPQSDKRLLVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTP  157 (448)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEeeeeEEEEEcCCChHHHHHHHHHHHHHHcCCeEeeECCccch
Confidence            6999999999999988877766544322 344567788999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCCCCcEEEEeCC-chhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEE
Q 012806          236 LTALYVAKLFHEAGLPPGVLNVVSGY-GPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFII  314 (456)
Q Consensus       236 ~~~~~l~~ll~~aGlP~g~v~vv~g~-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV  314 (456)
                      +++..++++|.++|+|+|++|+++|+ +.+.++.|+.|+++++|+||||+.+|+.|.+.++. +++|+++|+|||+|+||
T Consensus       158 ~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~aa~-~~~~~~lElGGk~~~iV  236 (448)
T TIGR01780       158 LSALALARLAEQAGIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTGSTNVGKILMKQSAS-TVKKVSMELGGNAPFIV  236 (448)
T ss_pred             HHHHHHHHHHHHcCCCccceEEEeCCCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCCceEeecCCCCeeEE
Confidence            99999999999999999999999997 67889999999999999999999999999999988 89999999999999999


Q ss_pred             cCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHH
Q 012806          315 FDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYI  394 (456)
Q Consensus       315 ~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i  394 (456)
                      ++|+|+|.+++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||++++.+++++.++|
T Consensus       237 ~~dadl~~aa~~iv~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i  316 (448)
T TIGR01780       237 FDDADIDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKVEKHI  316 (448)
T ss_pred             CCCCCHHHHHHHHHHHHHHhcCCcccCCceeechHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          395 RSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       395 ~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      ++++++|+++++||......|+|++|||+.+++++|+++.+ +||||++|+.|++.+|+|++
T Consensus       317 ~~a~~~Ga~il~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~  378 (448)
T TIGR01780       317 ADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTQDMLVAKEETFGPLAPVFKFDDEEEVIAI  378 (448)
T ss_pred             HHHHHCCCEEEeCCCcCCCCCeeEcCEEEecCCCCChHhhCCCCCceEEEEEECCHHHHHHH
Confidence            99999999999999765456899999999999999977775 99999999999999999875

SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070).

>TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase

Probab=100.00  E-value=8e-78  Score=627.12  Aligned_cols=391  Identities=30%  Similarity=0.489  Sum_probs=366.5

Q ss_pred             CceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 012806           59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEE  138 (456)
Q Consensus        59 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~  138 (456)
                      ++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++|++  .|++++..+|.++|+++++.|.+++++
T Consensus         2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~ai~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~   79 (477)
T TIGR01722         2 NHWIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETFL--TWGQTSLAQRTSVLLRYQALLKEHRDE   79 (477)
T ss_pred             ceeECCEEecCCCCCeEeeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence            579999998766678999999999999999999999999999999999999  999999999999999999999999999


Q ss_pred             HHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCC-CCcceEEEeeccceEEEEccCCchHHHHHhHHH
Q 012806          139 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVA  217 (456)
Q Consensus       139 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~  217 (456)
                      |++++++|+|||+.+++ .|+..+++.++|++.......+...+.. .+...+..++|+|||++|+|||||+.+.+|+++
T Consensus        80 l~~~~~~e~Gk~~~~a~-~ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~  158 (477)
T TIGR01722        80 IAELITAEHGKTHSDAL-GDVARGLEVVEHACGVNSLLKGETSTQVATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFP  158 (477)
T ss_pred             HHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEcccceEEEEccCChHHHHHHHHHH
Confidence            99999999999999998 6999999999999988877666554321 244567889999999999999999999999999


Q ss_pred             HHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhC
Q 012806          218 PALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKS  297 (456)
Q Consensus       218 ~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~  297 (456)
                      +||++||+||+|||+.+|+++..+.++|.++|+|+|++++++| +.+.+..|+.|++++.|+||||+.+|+.|.+.++. 
T Consensus       159 ~ALaaGN~VilKps~~~p~~~~~l~~~l~~aglP~g~~~~v~g-~~~~~~~L~~~~~v~~V~ftGS~~~g~~v~~~a~~-  236 (477)
T TIGR01722       159 IAIACGNTFVLKPSEKVPSAAVKLAELFSEAGAPDGVLNVVHG-DKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSA-  236 (477)
T ss_pred             HHHhcCCEEEeeCcccChHHHHHHHHHHHHhCcCCCeEEEEeC-CHHHHHHHHcCCCcCEEEEECCHHHHHHHHHHHHh-
Confidence            9999999999999999999999999999999999999999998 45668899999999999999999999999998887 


Q ss_pred             CCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCc
Q 012806          298 NLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVE  377 (456)
Q Consensus       298 ~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~  377 (456)
                      ++||+++|+||+||+||++|||+|.|++.+++++|.|+||.|++++|||||+++ ++|+++|+++++++++|+|.+++++
T Consensus       237 ~~~~v~lElGG~n~~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~rl~v~~~~-~~f~~~l~~~~~~~~~G~~~~~~~~  315 (477)
T TIGR01722       237 HGKRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAA-DEWVPEIRERAEKIRIGPGDDPGAE  315 (477)
T ss_pred             cCCeEEEECCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeCcH-HHHHHHHHHHHhcCCCCCCCCCCCC
Confidence            889999999999999999999999999999999999999999999999999998 9999999999999999999999999


Q ss_pred             cCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCccc--C--CCCceEecEEEecCCCChHhhhc-cccceEEeEEEcccccc
Q 012806          378 QGPQIDPEQFQKVLRYIRSGIESNATLECGGDRL--G--NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDC  452 (456)
Q Consensus       378 ~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~--~--~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~ea  452 (456)
                      +||++++++++++.++|++++++|+++++||...  .  .+|+|++|||+.+++++|+.+.+ +||||++|+.+++.+|+
T Consensus       316 ~Gp~i~~~~~~~~~~~i~~a~~~Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~V~~~~~~~ea  395 (477)
T TIGR01722       316 MGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEA  395 (477)
T ss_pred             cCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCChhhhCCCCCCeEEEEEeCCHHHH
Confidence            9999999999999999999999999999999752  1  35899999999999999977765 99999999999999999


Q ss_pred             ccc
Q 012806          453 TSI  455 (456)
Q Consensus       453 i~~  455 (456)
                      |++
T Consensus       396 i~~  398 (477)
T TIGR01722       396 IAL  398 (477)
T ss_pred             HHH
Confidence            875

In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus.

>TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase

Probab=100.00  E-value=1.6e-77  Score=623.19  Aligned_cols=384  Identities=33%  Similarity=0.477  Sum_probs=358.4

Q ss_pred             cCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 012806           58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME  137 (456)
Q Consensus        58 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~  137 (456)
                      -++||||+|+.  ++++++++||.||+++++++.++.+|+++|+++|++|+.     .++..+|.++|+++++.|+++.+
T Consensus         4 ~~~~i~g~~~~--~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~-----~~~~~~R~~~l~~~a~~l~~~~~   76 (472)
T TIGR03250         4 EALRIAGEKVS--RDRVIEVRYPYNGTVVGTVPKASVDDVRRAFAIAAAYRP-----TLTRYERSAILDRAAALLAARKE   76 (472)
T ss_pred             CCceECCEEec--CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHh-----hCCHHHHHHHHHHHHHHHHHhHH
Confidence            36799999985  467899999999999999999999999999999998764     68899999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCC-----CCCcceEEEeecc-ceEEEEccCCchHHH
Q 012806          138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG-----DGNYHIQTLHEPI-GVAGQIVPWNFPLLL  211 (456)
Q Consensus       138 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~P~-Gvv~~i~p~N~P~~~  211 (456)
                      +|++++++|+|||..++. .|+..+++.++||+..+.+..+...+.     ..+...++.++|+ |||++|+|||||+.+
T Consensus        77 ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~Gvv~~I~P~N~P~~~  155 (472)
T TIGR03250        77 EISDLITLESGLSKKDSL-YEVGRVADVLTFAAAEALRDDGQIFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQ  155 (472)
T ss_pred             HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccccCCCCCCceEEEEEcCCCCEEEEEcCCcHHHHH
Confidence            999999999999999987 599999999999999887766544321     1234567889998 999999999999999


Q ss_pred             HHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHH
Q 012806          212 FTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQ  291 (456)
Q Consensus       212 ~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~  291 (456)
                      .++++++||++||+||+|||+.+|+++..++++|+++|+|+|++|+++|++.+.+..|+.|++++.|.||||+.+|+.+.
T Consensus       156 ~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~  235 (472)
T TIGR03250       156 VAHKIAPAIATNNRMVVKPSEKTPLSALYLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIA  235 (472)
T ss_pred             HHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcccEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999997778899999999999999999999999999


Q ss_pred             HHHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCC
Q 012806          292 ELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDP  371 (456)
Q Consensus       292 ~~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p  371 (456)
                      +.++   ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus       236 ~~a~---~~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p  312 (472)
T TIGR03250       236 ARAG---YRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYGDP  312 (472)
T ss_pred             HHhc---CCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhhCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCC
Confidence            8764   6899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEcccc
Q 012806          372 FKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVT  450 (456)
Q Consensus       372 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~  450 (456)
                      +++++++||++++.+++++.++|++++++|+++++||..   .|+|++|||+.+++++|+.+.+ +||||++|+.++|.+
T Consensus       313 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~---~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~  389 (472)
T TIGR03250       313 MDPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVR---DGALYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDID  389 (472)
T ss_pred             CCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCc---CCEEEcCEEEeCCCCCChHHhCCCcCCeEEEEEeCCHH
Confidence            999999999999999999999999999999999999964   4899999999999999977765 999999999999999


Q ss_pred             ccccc
Q 012806          451 DCTSI  455 (456)
Q Consensus       451 eai~~  455 (456)
                      |++++
T Consensus       390 eai~~  394 (472)
T TIGR03250       390 DAIRI  394 (472)
T ss_pred             HHHHH
Confidence            99875

It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.

>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN

Probab=100.00  E-value=2.5e-77  Score=640.05  Aligned_cols=387  Identities=25%  Similarity=0.314  Sum_probs=351.6

Q ss_pred             CceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHh-cccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 012806           59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKA-FDEGPWPKMTPYERSRIMLRAADLIEKNME  137 (456)
Q Consensus        59 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a-~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~  137 (456)
                      ++||||+|+.+ ++++++++||.||+++++++.++ .|+++||++|++| |+  .|++++..+|.++|+++++.|+++++
T Consensus         2 ~~~i~g~~~~~-~~~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~~A~~aa~~--~W~~~~~~eR~~~L~~~a~~l~~~~~   77 (663)
T TIGR02278         2 QSYLSGEWRTG-QGEGVPVRDASTGEVLARVTSEG-LDVAAAVAWAREVGGP--ALRALTFHERARMLKALAQYLSERKE   77 (663)
T ss_pred             ceeECCEEEcC-CCCeEeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhcch--hhhcCCHHHHHHHHHHHHHHHHHHHH
Confidence            57999999865 36789999999999999999999 6999999999996 88  89999999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhc--------CcccCCC--CCcceEEEeecc-ceEEEEccCC
Q 012806          138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH--------GLTVPGD--GNYHIQTLHEPI-GVAGQIVPWN  206 (456)
Q Consensus       138 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~--------~~~~~~~--~~~~~~~~~~P~-Gvv~~i~p~N  206 (456)
                      +|+++ ++|+|||+.+++ .|+..+++.++||+..+++..        +...+..  ++...++.++|+ |||++|+|||
T Consensus        78 ela~~-~~e~GK~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~Gvv~~I~pwN  155 (663)
T TIGR02278        78 ALYAL-AATTGATRRDNW-VDIDGGIGTLFTYSSLGRRELPDANLIPEDEFEPLSKDGSFQGRHILTPKGGVAVQINAFN  155 (663)
T ss_pred             HHHHH-HHHcCCCHHHHH-HHHHHHHHHHHHHHHhhhhhccccccccCCceeccCCCCccceEEEEEeCCceEEEEcCCc
Confidence            99995 999999999998 699999999999999887632        3333321  223568899998 9999999999


Q ss_pred             chHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcC-CCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChh
Q 012806          207 FPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAG-LPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCD  285 (456)
Q Consensus       207 ~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aG-lP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~  285 (456)
                      ||+.++++++++||++||+||+|||+.+|+++..+.+++.++| +|+|++|+|+|+.   +..+..++++++|+||||++
T Consensus       156 ~P~~~~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l~~~~~~aG~lP~gv~~~v~g~~---~~~~~~~~~~~~V~FTGS~~  232 (663)
T TIGR02278       156 FPVWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLLPEGSLQLICGSA---GDLLDHLDHRDVVAFTGSAA  232 (663)
T ss_pred             hHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCcEEEEeCCh---HHHHhcCCCCCEEEEECCHH
Confidence            9999999999999999999999999999999999999999999 9999999999853   23333347789999999999


Q ss_pred             HHHHHHHHHh-hCCCccEEEecCCCCceEEcCCCC-----HHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHH
Q 012806          286 TGKIVQELAA-KSNLKPVTLELGGKSPFIIFDDAD-----VDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA  359 (456)
Q Consensus       286 ~g~~i~~~~a-~~~~~~v~lelgG~~~~iV~~daD-----~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l  359 (456)
                      +|+.|.+.++ ..+++|+++|+|||||+||++|||     +|.|++.+++++|.|+||.|++++|||||++++|+|+++|
T Consensus       233 ~G~~i~~~aaaa~~~~~~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l  312 (663)
T TIGR02278       233 TADRLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLKAL  312 (663)
T ss_pred             HHHHHHHhHhHHhcCceEEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHHhcCCCCccCCceEEEeHHHHHHHHHHH
Confidence            9999998743 238999999999999999999999     9999999999999999999999999999999999999999


Q ss_pred             HHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCCh-Hhhhc-cc
Q 012806          360 KARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSF-ISLLQ-FL  437 (456)
Q Consensus       360 ~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~-~~~~~-~f  437 (456)
                      +++++++++|+|+++++++||++++.+++++.++|++++++|+++++||... ..|+|++|||+.+++++| +.+.+ +|
T Consensus       313 ~~~~~~l~vG~p~~~~t~~Gpli~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~-~~g~~~~PTvl~~~~~~~~~i~~eE~F  391 (663)
T TIGR02278       313 QARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGR-LDGAFFPPTLLLAEDPWAGAVHATEAF  391 (663)
T ss_pred             HHHHHhccCCCccccCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcC-CCCeeEccEEEeeCCcchhhHHhcccc
Confidence            9999999999999999999999999999999999999999999999999753 358999999999999886 45554 99


Q ss_pred             cceEEeEEEccccccccc
Q 012806          438 IPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       438 gPv~~vv~~~~~~eai~~  455 (456)
                      |||++|+.++|.+|+|++
T Consensus       392 GPVl~V~~~~~~~eai~~  409 (663)
T TIGR02278       392 GPVATFFPYGDRAEAARL  409 (663)
T ss_pred             CCeEEEEeeCCHHHHHHH
Confidence            999999999999999875

This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.

>cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like

Probab=100.00  E-value=3.9e-77  Score=617.22  Aligned_cols=376  Identities=35%  Similarity=0.544  Sum_probs=353.6

Q ss_pred             eecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhh
Q 012806           77 VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLK  156 (456)
Q Consensus        77 v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~  156 (456)
                      ++||.||+++++++.++.+|++.|++.|++||+.+.|+. +..+|.++|+++++.|++++++|++++++|+|||..+++ 
T Consensus         1 ~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~-~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-   78 (455)
T cd07120           1 SIDPATGEVIGTYADGGVAEAEAAIAAARRAFDETDWAH-DPRLRARVLLELADAFEANAERLARLLALENGKILGEAR-   78 (455)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-
Confidence            469999999999999999999999999999998445998 999999999999999999999999999999999999998 


Q ss_pred             ccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchH
Q 012806          157 SEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL  236 (456)
Q Consensus       157 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~  236 (456)
                      .|+..+++.++||++.+++..+...+...+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+
T Consensus        79 ~Ev~~~i~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~~~  158 (455)
T cd07120          79 FEISGAISELRYYAGLARTEAGRMIEPEPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQ  158 (455)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEecceeEEEECCCchHHHHHHHHHHHHHHcCCEEEeECCCCChH
Confidence            59999999999999988877665543333456788999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHH-cCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEEc
Q 012806          237 TALYVAKLFHE-AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIF  315 (456)
Q Consensus       237 ~~~~l~~ll~~-aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~  315 (456)
                      ++..++++|++ +|+|+|++++++|++.+++..|+.|++++.|.||||+.+|+.|.+.++. ++|++++|+||++|+||+
T Consensus       159 ~~~~l~~~~~~aag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~-~~~~~~lElGG~~~~IV~  237 (455)
T cd07120         159 INAAIIRILAEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAP-TLKRLGLELGGKTPCIVF  237 (455)
T ss_pred             HHHHHHHHHHHhcCCCccceEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCeEEEECCCCCeeEEC
Confidence            99999999999 7999999999999878889999999999999999999999999999888 899999999999999999


Q ss_pred             CCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHH
Q 012806          316 DDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIR  395 (456)
Q Consensus       316 ~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~  395 (456)
                      +|+|+|.|++.+++++|.|+||.|++++|||||++++++|+++|+++++++++|+|.++++++||++++.+++++.++|+
T Consensus       238 ~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~  317 (455)
T cd07120         238 DDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVDRVDRMVE  317 (455)
T ss_pred             CCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCCcCCccCHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCeEEeCCcccC---CCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          396 SGIESNATLECGGDRLG---NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       396 ~a~~~Ga~v~~gg~~~~---~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      +++++|+++++||....   .+|+|++|||+.+++++|+.+.+ +||||++|+.+++.+|+|++
T Consensus       318 ~a~~~ga~~~~~g~~~~~~~~~g~~~~Ptvl~~~~~d~~i~~~E~FgPvl~v~~~~~~deai~~  381 (455)
T cd07120         318 RAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVAL  381 (455)
T ss_pred             HHHHCCCEEEeCCccCcccCCCCceECCEEEecCCCCChhhhCcCcCceEEEeecCCHHHHHHH
Confidence            99999999999886433   26899999999999999977765 99999999999999999975

Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural.

>PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1

Probab=100.00  E-value=6.3e-78  Score=626.53  Aligned_cols=385  Identities=45%  Similarity=0.741  Sum_probs=363.3

Q ss_pred             EeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 012806           66 FVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETW  145 (456)
Q Consensus        66 ~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~  145 (456)
                      |+++.+ ++++++||.||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|+++.++|++++++
T Consensus         1 w~~~~~-~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~   77 (462)
T PF00171_consen    1 WVSSES-ETFDVINPATGEVIGEVPSATAEDVDRAVEAARAAFK--EWSKLPAAERARILERFADLLEERRDELAELIAL   77 (462)
T ss_dssp             EEE-TS-SEEEEEETTTECEEEEEEEBSHHHHHHHHHHHHHHHH--HHTTSSHHHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             CcCCCC-CEEcCCCCCCcCEEEEEcCCCHHHHHHHHHHHHHHHH--hhhhhhhhhHHHHHHHHHHHHhhccccccccccc
Confidence            776655 7899999999999999999999999999999999999  9999999999999999999999999999999999


Q ss_pred             hcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCE
Q 012806          146 NNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNT  225 (456)
Q Consensus       146 e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~  225 (456)
                      |+|||+.+++. |+..+++.++||+++++++.++..+.+.+...++.++|+|||++|+|||||+.+.++++++||++||+
T Consensus        78 e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~  156 (462)
T PF00171_consen   78 ETGKPIAEARG-EVDRAIDFLRYYADAARKLAGEVLPSDPGSRNYTRREPLGVVLIITPWNFPLYLAVWKIAPALAAGNT  156 (462)
T ss_dssp             HHTSSHHHHHH-HHHHHHHHHHHHHHHHHHHTEEEEEESTTEEEEEEEEE-SEEEEEE-SSSCTHHHHHHHHHHHHTT-E
T ss_pred             ccccccccccc-hhhhhhhhhhhhhhcccceehhhcccccccccccccccccceeecccccccccccccchhhhhccccc
Confidence            99999999985 99999999999999999877766555667889999999999999999999999999999999999999


Q ss_pred             EEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEe
Q 012806          226 IVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLE  305 (456)
Q Consensus       226 vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~le  305 (456)
                      ||+|||+.+|.++..++++++++|+|+|++|+++|++.+.+..|..|++++.|.||||+++|+.|.+.+++ +++|+++|
T Consensus       157 VVlkps~~~~~~~~~l~~~~~~AglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~~-~~~~v~le  235 (462)
T PF00171_consen  157 VVLKPSEQAPLTALLLAELLEEAGLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGSTATGRAIAKAAAK-NLKPVVLE  235 (462)
T ss_dssp             EEEEEBTTSHHHHHHHHHHHHHHTSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEHHHHHHHHHHHHT-TTSEEEEE
T ss_pred             ceeeeccccccccccchhhccccccccccccccccccccccceeeeccccceeeecchhhhhhhhhhhccc-cccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999887 89999999


Q ss_pred             cCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHH
Q 012806          306 LGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPE  385 (456)
Q Consensus       306 lgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~  385 (456)
                      +||+||+||++|||+|.|++.+++++|+|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++..
T Consensus       236 lgG~~p~iV~~daDld~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~~gpl~~~~  315 (462)
T PF00171_consen  236 LGGKNPVIVDPDADLDKAAEAIVRGAFFNSGQSCTAPSRVLVHESIYDEFVEALKERVAKLRVGDPLDESTDVGPLISKA  315 (462)
T ss_dssp             ECEEEEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHHTSEBSSTTSTTCSBCHCSSHH
T ss_pred             ccccceeeEecccccccccccccchhcccccccccccccccccccccchhhhhhhhccccccccCCccccccccccccch
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHcCCeEEeCC---cccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          386 QFQKVLRYIRSGIESNATLECGG---DRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       386 ~~~~v~~~i~~a~~~Ga~v~~gg---~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      +++++.++|++++++||++++||   ......|+|++|||+.+++++|+.+.+ +||||++|+.|+|.+|+|++
T Consensus       316 ~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~  389 (462)
T PF00171_consen  316 QRERVKALIEDAVAEGAKVLCGGEPQEADPENGFFIPPTVLEDVPPDMPIMQEEIFGPVLPVVPYDDLDEAIAL  389 (462)
T ss_dssp             HHHHHHHHHHHHHHTTSEEEEETSSSSBCSSSSTEEEEEEEESEHTTSHHHHSC-SSSEEEEEEESSHHHHHHH
T ss_pred             hhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccceecccccchhhhhc
Confidence            99999999999999999999999   334567999999999999999977765 99999999999999999875

2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A ....

>cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like

Probab=100.00  E-value=6.2e-77  Score=616.78  Aligned_cols=376  Identities=43%  Similarity=0.725  Sum_probs=355.0

Q ss_pred             ecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhc
Q 012806           78 YDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKS  157 (456)
Q Consensus        78 ~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~  157 (456)
                      .||.||+++++++.++.+|++++++.|++||+.+.|+++|.++|.++|+++++.|++++++|++++++|+|||+.+++ .
T Consensus         2 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~   80 (454)
T cd07118           2 RSPAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERLALIETLESGKPISQAR-G   80 (454)
T ss_pred             CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-H
Confidence            589999999999999999999999999999985569999999999999999999999999999999999999999997 6


Q ss_pred             cHHHHHHHHHHHHHhhhHhcCcccCC-CCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchH
Q 012806          158 EVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL  236 (456)
Q Consensus       158 ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~  236 (456)
                      |+..+++.++|+++..+++.+...+. ..+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.
T Consensus        81 ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~ALaaGN~Vi~Kps~~~p~  160 (454)
T cd07118          81 EIEGAADLWRYAASLARTLHGDSYNNLGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSG  160 (454)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCcccccCCCCceeeEEeecceEEEEECCCCcHHHHHHHHHHHHHhcCCEEEEECCCCCcH
Confidence            99999999999999877766554432 23445678899999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEEcC
Q 012806          237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFD  316 (456)
Q Consensus       237 ~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~~  316 (456)
                      ++..+.++|.++|+|+|++++++|++.+++..|..|++++.|.||||+++|+.|.+.++. +++++++|+|||||+||++
T Consensus       161 ~~~~l~~~~~~aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~-~~~~~~lelgG~n~~iV~~  239 (454)
T cd07118         161 TTLMLAELLIEAGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAAR-NLKKVSLELGGKNPQIVFA  239 (454)
T ss_pred             HHHHHHHHHHhcCCCccceEEEecCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cCCcEEeccCCCCceEECC
Confidence            999999999999999999999999777789999999999999999999999999999988 8999999999999999999


Q ss_pred             CCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHH
Q 012806          317 DADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRS  396 (456)
Q Consensus       317 daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~  396 (456)
                      |||+|.|++.+++++|+|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++
T Consensus       240 dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~p~~~~~~~gpli~~~~~~~~~~~i~~  319 (454)
T cd07118         240 DADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKVGAIINEAQLAKITDYVDA  319 (454)
T ss_pred             CCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCcCCCCcCHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHcCCeEEeCCcccC-CCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          397 GIESNATLECGGDRLG-NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       397 a~~~Ga~v~~gg~~~~-~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      ++++|+++++||.... ..|+|++|||+.+++++|+.+.+ +||||++|+.++|.+|+|++
T Consensus       320 a~~~ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~  380 (454)
T cd07118         320 GRAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEAIAL  380 (454)
T ss_pred             HHhCCCEEEeCCCCCCCCCCeEEeCEEEeCCCCCCHHHhCCCCCceEEEEEECCHHHHHHH
Confidence            9999999999997654 36899999999999999977775 99999999999999999975

Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase.

>PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed

Probab=100.00  E-value=6.1e-77  Score=625.47  Aligned_cols=395  Identities=35%  Similarity=0.492  Sum_probs=367.9

Q ss_pred             CCCCccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHH
Q 012806           53 VQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLI  132 (456)
Q Consensus        53 ~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l  132 (456)
                      .+.+...++|.|.|  +.++++++++||.||+++++++.++.+|++.++++|++|++  .|++++.++|.++|+++++.|
T Consensus        14 ~~~~~~~~~~~~~~--~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l   89 (524)
T PRK09407         14 LTFERLRRLTARVD--GAAGPTREVTAPFTGEPLATVPVSTAADVEAAFARARAAQR--AWAATPVRERAAVLLRFHDLV   89 (524)
T ss_pred             ccHHHHHHHHhhcC--CCCCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHH
Confidence            34445678999999  66889999999999999999999999999999999999999  999999999999999999999


Q ss_pred             HHhHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccC---CCCCcceEEEeeccceEEEEccCCchH
Q 012806          133 EKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP---GDGNYHIQTLHEPIGVAGQIVPWNFPL  209 (456)
Q Consensus       133 ~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~P~Gvv~~i~p~N~P~  209 (456)
                      .++.++|++++++|+|||..++. .|+..++..++||+..+.+..+....   .......+..++|+|||++|+|||||+
T Consensus        90 ~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~Pl  168 (524)
T PRK09407         90 LENREELLDLVQLETGKARRHAF-EEVLDVALTARYYARRAPKLLAPRRRAGALPVLTKTTELRQPKGVVGVISPWNYPL  168 (524)
T ss_pred             HHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCccccccCCCCceEEEEEecceEEEEEeCCCChH
Confidence            99999999999999999999987 69999999999999988776554321   112245788899999999999999999


Q ss_pred             HHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHH
Q 012806          210 LLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKI  289 (456)
Q Consensus       210 ~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~  289 (456)
                      ...++++++||++||+||+|||+.+|.++..++++++++|+|+|++++++|++.+.++.|+.|  ++.|.||||+++|+.
T Consensus       169 ~~~~~~~~~ALaaGN~VIlKPs~~tp~~~~~l~~ll~eaGlP~gvv~~v~g~~~~~~~~L~~~--~d~V~fTGs~~~g~~  246 (524)
T PRK09407        169 TLAVSDAIPALLAGNAVVLKPDSQTPLTALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATGRV  246 (524)
T ss_pred             HHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCcccEEEEecCCchHHHHHHhc--CCEEEEECCHHHHHH
Confidence            999999999999999999999999999999999999999999999999999888888999875  789999999999999


Q ss_pred             HHHHHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcC
Q 012806          290 VQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVG  369 (456)
Q Consensus       290 i~~~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g  369 (456)
                      |.+.+++ +++++++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus       247 v~~~aa~-~~~~v~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~sGQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G  325 (524)
T PRK09407        247 LAEQAGR-RLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVRAFVAAVRAMRLG  325 (524)
T ss_pred             HHHHHHh-cCCcEEEECCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCC
Confidence            9999988 899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccC-CCCceEecEEEecCCCChHhhhc-cccceEEeEEEc
Q 012806          370 DPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG-NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILC  447 (456)
Q Consensus       370 ~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~-~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~  447 (456)
                      +|.++++++||++++++++++.++|++++++|+++++||.... ..|+|++|||+.+++++|+++.+ +||||++|+.++
T Consensus       326 ~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~  405 (524)
T PRK09407        326 AGYDYSADMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVA  405 (524)
T ss_pred             CCCCcCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCceEeCEEEeCCCCCChHHhCCCCCCeEEEEeeC
Confidence            9999999999999999999999999999999999999997533 35799999999999999977775 999999999999


Q ss_pred             cccccccc
Q 012806          448 VVTDCTSI  455 (456)
Q Consensus       448 ~~~eai~~  455 (456)
                      |.+|+|++
T Consensus       406 ~~deai~~  413 (524)
T PRK09407        406 DVDEAVER  413 (524)
T ss_pred             CHHHHHHH
Confidence            99999875

>cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like

Probab=100.00  E-value=9.6e-77  Score=616.66  Aligned_cols=383  Identities=48%  Similarity=0.769  Sum_probs=359.4

Q ss_pred             CeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChh
Q 012806           73 KTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYV  152 (456)
Q Consensus        73 ~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~  152 (456)
                      .+++++||.||+++++++.++.+|++++++.|++||+.+.|+.++.++|.++|+++++.|++++++|++++++|+|||..
T Consensus         2 ~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~   81 (462)
T cd07112           2 ETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAHRDELALLETLDMGKPIS   81 (462)
T ss_pred             CeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH
Confidence            46889999999999999999999999999999999984469999999999999999999999999999999999999999


Q ss_pred             hhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCC
Q 012806          153 QSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAE  232 (456)
Q Consensus       153 ~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~  232 (456)
                      ++...|+..+++.++|++...++..+...+...+...+..++|+|||++|+|||||+..+++++++||++||+||+|||+
T Consensus        82 ~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~  161 (462)
T cd07112          82 DALAVDVPSAANTFRWYAEAIDKVYGEVAPTGPDALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAE  161 (462)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCeEEEEEEeeeeeEEEECCCchHHHHHHHHHHHHHHcCCeeeeeCCC
Confidence            98645999999999999999887766544333344577899999999999999999999999999999999999999999


Q ss_pred             CchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCce
Q 012806          233 QTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPF  312 (456)
Q Consensus       233 ~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~  312 (456)
                      ++|.++..++++|.++|+|+|++++++|++.+.+..|..|++++.|.||||+.+|+.|.+.++..++||+++|+||+||+
T Consensus       162 ~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~lelgG~n~~  241 (462)
T cd07112         162 QSPLTALRLAELALEAGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGGKSPN  241 (462)
T ss_pred             CCCHHHHHHHHHHHhcCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHHhcCCEEEecCCCCCeE
Confidence            99999999999999999999999999998888999999999999999999999999999988844799999999999999


Q ss_pred             EEcCCC-CHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHH
Q 012806          313 IIFDDA-DVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVL  391 (456)
Q Consensus       313 iV~~da-D~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~  391 (456)
                      ||++|+ |+|.|++.+++++|.|+||.|++++|||||++++++|+++|+++++++++|+|+++++++||++++++++++.
T Consensus       242 iV~~da~dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~  321 (462)
T cd07112         242 IVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPGDPLDPATRMGALVSEAHFDKVL  321 (462)
T ss_pred             EECCCCcCHHHHHHHHHHHHHhccCCCCCCCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHH
Confidence            999999 9999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCeEEeCCcccC--CCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          392 RYIRSGIESNATLECGGDRLG--NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       392 ~~i~~a~~~Ga~v~~gg~~~~--~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      ++|++++++|+++++||....  ..|+|++|||+.+++++|+.+.+ +||||++|+.|++.+|+|++
T Consensus       322 ~~v~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~  388 (462)
T cd07112         322 GYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVAL  388 (462)
T ss_pred             HHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEecCCCCCChHHhCCCCCceEEEEEeCCHHHHHHH
Confidence            999999999999999997532  35899999999999999977775 99999999999999999875

NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD.

>cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like

Probab=100.00  E-value=4.6e-77  Score=619.06  Aligned_cols=375  Identities=38%  Similarity=0.616  Sum_probs=354.5

Q ss_pred             eeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhh
Q 012806           75 FPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQS  154 (456)
Q Consensus        75 ~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a  154 (456)
                      ++++||.||+++++++.++.+|+++++++|++||+  .|+.++.++|.++|+++++.|++++++|++++++|+|||..++
T Consensus         1 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a   78 (456)
T cd07145           1 IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKD--VMSNLPAYKRYKILMKVAELIERRKEELAKLLTIEVGKPIKQS   78 (456)
T ss_pred             CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHH
Confidence            35789999999999999999999999999999999  9999999999999999999999999999999999999999999


Q ss_pred             hhccHHHHHHHHHHHHHhhhHhcCcccCCCC-----CcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEe
Q 012806          155 LKSEVPMVVRLLHYYAGWADKIHGLTVPGDG-----NYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLK  229 (456)
Q Consensus       155 ~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlK  229 (456)
                      + .|+..+++.++|+++....+.+...+.+.     +...+..++|+|||++|+|||||+.+.++++++||++||+||+|
T Consensus        79 ~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~K  157 (456)
T cd07145          79 R-VEVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVK  157 (456)
T ss_pred             H-HHHHHHHHHHHHHHHHHHHhcCccccCccccccCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEE
Confidence            8 59999999999999887766655433221     34567889999999999999999999999999999999999999


Q ss_pred             cCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCC
Q 012806          230 SAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGK  309 (456)
Q Consensus       230 ps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~  309 (456)
                      ||+.+|+++..+.++++++|+|+|++++++|++.+.++.|+.|++++.|.||||+.+|+.|.+.+++ +++|+++|+|||
T Consensus       158 ps~~~p~~~~~l~~~~~~ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~-~~~~v~lElgG~  236 (456)
T cd07145         158 PSSNTPLTAIELAKILEEAGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGG-TGKKVALELGGS  236 (456)
T ss_pred             CCccchHHHHHHHHHHHHcCCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhh-cCCceEEecCCC
Confidence            9999999999999999999999999999999888889999999999999999999999999999998 899999999999


Q ss_pred             CceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHH
Q 012806          310 SPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQK  389 (456)
Q Consensus       310 ~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~  389 (456)
                      ||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+++++++||++++.++++
T Consensus       237 n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~  316 (456)
T cd07145         237 DPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAVER  316 (456)
T ss_pred             CeeEECCCCCHHHHHHHHHHHHHhccCCCCccCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCcCHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          390 VLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       390 v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      +.++|++++++|+++++||..+  .|+|++|||+.+++++|+.+.+ +||||++|+.+++.+|+|++
T Consensus       317 ~~~~i~~a~~~ga~vl~gg~~~--~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~  381 (456)
T cd07145         317 MENLVNDAVEKGGKILYGGKRD--EGSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEI  381 (456)
T ss_pred             HHHHHHHHHHCCCEEEeCCCCC--CCeEECCEeecCCCCCChHhhCCCCCceEEEEEECCHHHHHHH
Confidence            9999999999999999999753  3899999999999999977765 99999999999999999875

NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD.

>PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-76  Score=619.11  Aligned_cols=388  Identities=29%  Similarity=0.433  Sum_probs=360.4

Q ss_pred             ccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 012806           57 YTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM  136 (456)
Q Consensus        57 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~  136 (456)
                      ..++||||+|+.+.++++++++||.||+++++++.++.+|++.+++.|++||+  .|+.++..+|.++|+++++.|++++
T Consensus        15 ~~~~~i~G~~~~~~~~~~~~~~~P~t~~~i~~~~~a~~~dv~~av~~A~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~~   92 (496)
T PLN00412         15 VYKYYADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAKAAQK--AWAKTPLWKRAELLHKAAAILKEHK   92 (496)
T ss_pred             ccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhH
Confidence            34789999999766778999999999999999999999999999999999999  9999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCc--cc-----CCC-CCcceEEEeeccceEEEEccCCch
Q 012806          137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL--TV-----PGD-GNYHIQTLHEPIGVAGQIVPWNFP  208 (456)
Q Consensus       137 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~--~~-----~~~-~~~~~~~~~~P~Gvv~~i~p~N~P  208 (456)
                      ++|++++++|+|||..++. .|+..+++.++|++..+.+..+.  ..     +.. .+...+..++|+|||++|+|||||
T Consensus        93 ~el~~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P  171 (496)
T PLN00412         93 APIAECLVKEIAKPAKDAV-TEVVRSGDLISYTAEEGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYP  171 (496)
T ss_pred             HHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCccCCceeEEEEecceEEEEECCCCch
Confidence            9999999999999999997 69999999999999877665432  11     111 123456789999999999999999


Q ss_pred             HHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHH
Q 012806          209 LLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGK  288 (456)
Q Consensus       209 ~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~  288 (456)
                      +..+++++++||++||+||+|||+.+|.++..+++++.++|+|+|++++++|++.+.+..|..|++++.|.|||| .+|+
T Consensus       172 ~~~~~~~i~~ALaaGN~VIlKPs~~t~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs-~~g~  250 (496)
T PLN00412        172 VNLAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGG-DTGI  250 (496)
T ss_pred             HHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHhCCCcccEEEEecCchHHHHHHhcCCCcCEEEEeCh-HHHH
Confidence            999999999999999999999999999999999999999999999999999977788999999999999999999 9999


Q ss_pred             HHHHHHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhc
Q 012806          289 IVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIV  368 (456)
Q Consensus       289 ~i~~~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~  368 (456)
                      .+.+.++   ++|+++|+|||||+||++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++
T Consensus       251 ~v~~~a~---~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~  327 (496)
T PLN00412        251 AISKKAG---MVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLTV  327 (496)
T ss_pred             HHHHHhC---CCcEEEEcCCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEcHHHHHHHHHHHHHHHHhCcc
Confidence            9988763   6899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEc
Q 012806          369 GDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILC  447 (456)
Q Consensus       369 g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~  447 (456)
                      |+|.+ ++++||++++.+++++.++|++++.+|+++++||..   .|+|++|||+.+++++|+++.+ +||||++|+.++
T Consensus       328 g~p~~-~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~~~~~---~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~  403 (496)
T PLN00412        328 GPPED-DCDITPVVSESSANFIEGLVMDAKEKGATFCQEWKR---EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIN  403 (496)
T ss_pred             CCCcc-cCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCeEEecEEEeCCCCCCHHHhCcCCCCeEEEEEeC
Confidence            99987 789999999999999999999999999999998753   5899999999999999977765 999999999999


Q ss_pred             cccccccc
Q 012806          448 VVTDCTSI  455 (456)
Q Consensus       448 ~~~eai~~  455 (456)
                      |.+|||++
T Consensus       404 ~~deai~~  411 (496)
T PLN00412        404 SVEEGIHH  411 (496)
T ss_pred             CHHHHHHH
Confidence            99999975

>PRK11903 aldehyde dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-76  Score=620.30  Aligned_cols=389  Identities=25%  Similarity=0.320  Sum_probs=348.4

Q ss_pred             cCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhc-ccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 012806           58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAF-DEGPWPKMTPYERSRIMLRAADLIEKNM  136 (456)
Q Consensus        58 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~-~~~~w~~~~~~~R~~iL~~~a~~l~~~~  136 (456)
                      .++||||+|+.. ++++++++||.||+++++++. +.+|+++|+++|++|+ +  .|++++..+|.++|+++++.|++++
T Consensus         5 ~~~~i~G~~~~~-~~~~~~~~nP~tge~l~~v~~-~~~dv~~Av~aA~~A~~~--~W~~~~~~eR~~~L~~~a~~l~~~~   80 (521)
T PRK11903          5 LANYVAGRWQAG-SGAGTPLFDPVTGEELVRVSA-TGLDLAAAFAFAREQGGA--ALRALTYAQRAALLAAIVKVLQANR   80 (521)
T ss_pred             hhhhCCCEEEcC-CCCeeeeECCCCCCEEEEecC-ChHHHHHHHHHHHHhhhh--hhhhCCHHHHHHHHHHHHHHHHHHH
Confidence            368999999864 457899999999999999997 8899999999999995 7  8999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCC---------CcceEEEeec-cceEEEEccCC
Q 012806          137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDG---------NYHIQTLHEP-IGVAGQIVPWN  206 (456)
Q Consensus       137 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~P-~Gvv~~i~p~N  206 (456)
                      ++|++++++|+|||+.+++ .|+..+++.++||+.++....+......+         ....+..++| +|||++|+|||
T Consensus        81 ~ela~~~~~e~Gkp~~~a~-~ev~~~i~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN  159 (521)
T PRK11903         81 DAYYDIATANSGTTRNDSA-VDIDGGIFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFN  159 (521)
T ss_pred             HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcccCCCccccccccccccceEEEecCcceEEEECCcc
Confidence            9999999999999999998 59999999999999988766543221111         2234667889 69999999999


Q ss_pred             chHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcC-CCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChh
Q 012806          207 FPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAG-LPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCD  285 (456)
Q Consensus       207 ~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aG-lP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~  285 (456)
                      ||+.++++++++||++||+||+|||+.+|+++..+.+++.++| +|+|++++++|++.+++..|   +++|.|+||||++
T Consensus       160 ~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~ag~lP~gv~~~v~g~~~~~~~~l---~~v~~v~fTGS~~  236 (521)
T PRK11903        160 FPAWGLWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAAGILPAGALSVVCGSSAGLLDHL---QPFDVVSFTGSAE  236 (521)
T ss_pred             hHHHHHHHHHHHHHHcCCeEEEEcCCcChHHHHHHHHHHHHhCCCCcCceEEeeCCchHHHhcc---cCCCEEEEECCHH
Confidence            9999999999999999999999999999999999999999999 99999999999766655444   7899999999999


Q ss_pred             HHHHHHHHHh-hCCCccEEEecCCCCceEEcCCCC-----HHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHH
Q 012806          286 TGKIVQELAA-KSNLKPVTLELGGKSPFIIFDDAD-----VDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA  359 (456)
Q Consensus       286 ~g~~i~~~~a-~~~~~~v~lelgG~~~~iV~~daD-----~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l  359 (456)
                      +|+.|.+.++ ..+++|+++|+|||||+||++|||     ++.+++.+++++|.|+||.|++++|+|||+++||+|+++|
T Consensus       237 ~G~~v~~~aa~~~~~~~~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~L  316 (521)
T PRK11903        237 TAAVLRSHPAVVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALYDAVAEAL  316 (521)
T ss_pred             HHHHHHhhhhhhccCceeEeeccccCceEEccCCcccchhHHHHHHHHHHHHHhccCCCccCCeEEEEehhHHHHHHHHH
Confidence            9999998643 237899999999999999999999     5999999999999999999999999999999999999999


Q ss_pred             HHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCccc------CCCCceEecEEEecCCCC--hH
Q 012806          360 KARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRL------GNRGYFVQPTVFSDVTVS--FI  431 (456)
Q Consensus       360 ~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~------~~~g~~i~PtVl~~v~~~--~~  431 (456)
                      +++++++++|+|+++++++||++++.+++++.++|+.. .+|+++++||...      .++|+|++||||.+++++  |+
T Consensus       317 ~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~~-~~ga~vl~gg~~~~~~~~~~~~g~~~~PTvl~~~~~~~~~~  395 (521)
T PRK11903        317 AARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAAL-RAQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAATA  395 (521)
T ss_pred             HHHHHhccCCCCCCCcCccCCCCCHHHHHHHHHHHHHH-hcCCEEEECCccCCCCCCCCCCCeEEcCEEEeccCCCccch
Confidence            99999999999999999999999999999999999964 5799999999652      235899999999876654  54


Q ss_pred             hhh-ccccceEEeEEEccccccccc
Q 012806          432 SLL-QFLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       432 ~~~-~~fgPv~~vv~~~~~~eai~~  455 (456)
                      ++. |+||||++|+.|++.+|+|++
T Consensus       396 i~~eE~FGPvl~V~~~~~~~eai~~  420 (521)
T PRK11903        396 VHDVEVFGPVATLLPYRDAAHALAL  420 (521)
T ss_pred             HHhCcccCCeEEEEeeCCHHHHHHH
Confidence            555 499999999999999999864

>cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like

Probab=100.00  E-value=1.5e-76  Score=614.81  Aligned_cols=374  Identities=39%  Similarity=0.651  Sum_probs=353.4

Q ss_pred             eecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhh
Q 012806           77 VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLK  156 (456)
Q Consensus        77 v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~  156 (456)
                      ++||.||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|+++.++|++++++|+|||+.++. 
T Consensus         1 ~~~p~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-   77 (456)
T cd07107           1 VINPATGQVLARVPAASAADVDRAVAAARAAFP--EWRATTPLERARMLRELATRLREHAEELALIDALDCGNPVSAML-   77 (456)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-
Confidence            479999999999999999999999999999999  99999999999999999999999999999999999999999987 


Q ss_pred             ccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchH
Q 012806          157 SEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL  236 (456)
Q Consensus       157 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~  236 (456)
                      .|+..+++.++|+++....+.+...+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+
T Consensus        78 ~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~  157 (456)
T cd07107          78 GDVMVAAALLDYFAGLVTELKGETIPVGGRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPL  157 (456)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCccccCCCCceEEEEEecceEEEEECCcccHHHHHHHHHhHHHHcCCEEEEeCCCCChH
Confidence            69999999999999888777666555444456788999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEEcC
Q 012806          237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFD  316 (456)
Q Consensus       237 ~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~~  316 (456)
                      ++..+++++.++ +|+|++|+++|++.+.+..|+.|+++++|+||||+.+|+.|.+.+++ +++|+++|+|||+|+||++
T Consensus       158 ~~~~l~~~~~~~-lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~-~~~~~~lElgG~~p~iV~~  235 (456)
T cd07107         158 SALRLAELAREV-LPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAE-GIKHVTLELGGKNALIVFP  235 (456)
T ss_pred             HHHHHHHHHHHh-CCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc-CCCeEEEECCCCCeEEECC
Confidence            999999999995 99999999999777789999999999999999999999999999888 8999999999999999999


Q ss_pred             CCCHHHHHHHHHHHh-hhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHH
Q 012806          317 DADVDQAVELAHFAL-FYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIR  395 (456)
Q Consensus       317 daD~d~aa~~i~~~~-~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~  395 (456)
                      |||+|.|++.+++++ |.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||++++.+++++.++|+
T Consensus       236 dadl~~Aa~~i~~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~  315 (456)
T cd07107         236 DADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPATTMGPLVSRQQYDRVMHYID  315 (456)
T ss_pred             CCCHHHHHHHHHHhchhhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCcccCHHHHHHHHHHHH
Confidence            999999999999995 9999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCeEEeCCcccC----CCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          396 SGIESNATLECGGDRLG----NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       396 ~a~~~Ga~v~~gg~~~~----~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      +++++|+++++||....    ..|+|++|||+.+++++|+.+.+ +||||++|+.|++.+|+|++
T Consensus       316 ~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~i~~~~~~~eai~~  380 (456)
T cd07107         316 SAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRDEAEMVAQ  380 (456)
T ss_pred             HHHHCCCEEEeCCCccccccCCCCceECCEEEECCCCCChhhhCCCCCceEEEEeeCCHHHHHHH
Confidence            99999999999996532    35899999999999999977776 99999999999999999875

Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD.

>cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins

Probab=100.00  E-value=2.1e-76  Score=613.57  Aligned_cols=376  Identities=38%  Similarity=0.539  Sum_probs=354.4

Q ss_pred             eecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCC-CCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhh
Q 012806           77 VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWP-KMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSL  155 (456)
Q Consensus        77 v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~-~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~  155 (456)
                      ++||.||+++++++.++.+|+++++++|++||+  .|+ +++..+|.++|+++++.|+++.++|++++++|+|||+.++.
T Consensus         1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~w~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~   78 (459)
T cd07089           1 VINPATEEVIGTAPDAGAADVDAAIAAARRAFD--TGDWSTDAEERARCLRQLHEALEARKEELRALLVAEVGAPVMTAR   78 (459)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH
Confidence            469999999999999999999999999999999  898 99999999999999999999999999999999999997776


Q ss_pred             hccHHHHHHHHHHHHHhhhHhcCccc-CCC----CCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEec
Q 012806          156 KSEVPMVVRLLHYYAGWADKIHGLTV-PGD----GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKS  230 (456)
Q Consensus       156 ~~ev~~~~~~l~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKp  230 (456)
                      ..|+..+++.++||++.+.+..+... +..    .+...++.++|+|||++|+|||||+...++++++||++||+||+||
T Consensus        79 ~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKp  158 (459)
T cd07089          79 AMQVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKP  158 (459)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEEC
Confidence            56999999999999998877655442 211    2456789999999999999999999999999999999999999999


Q ss_pred             CCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCC
Q 012806          231 AEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKS  310 (456)
Q Consensus       231 s~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~  310 (456)
                      |+.+|.++..+.++|+++|+|+|++++++|++.+.+..|..|++++.|.||||+.+|+.|.+.+++ ++||+++|+||||
T Consensus       159 s~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~n  237 (459)
T cd07089         159 APDTPLSALLLGEIIAETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAA-TLKRVLLELGGKS  237 (459)
T ss_pred             CCCChHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cCCcEEEECCCCC
Confidence            999999999999999999999999999999887789999999999999999999999999999988 8999999999999


Q ss_pred             ceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHH
Q 012806          311 PFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKV  390 (456)
Q Consensus       311 ~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v  390 (456)
                      |+||++|+|+|.+++.+++++|.|+||.|+++++||||++++++|+++|+++++++++|+|.++++++||++++.+++++
T Consensus       238 ~~iV~~dadl~~aa~~i~~~~~~~sGQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~i~~~~~~~v  317 (459)
T cd07089         238 ANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDRV  317 (459)
T ss_pred             eeEECCCCCHHHHHHHHHHHHHHhcCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCeEEeCCcccC--CCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          391 LRYIRSGIESNATLECGGDRLG--NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       391 ~~~i~~a~~~Ga~v~~gg~~~~--~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      .++|++++++|+++++||....  ..|+|++|||+.+++++|+.+.+ +||||++|+.++|.||+|++
T Consensus       318 ~~~i~~a~~~Ga~~l~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~  385 (459)
T cd07089         318 EGYIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRI  385 (459)
T ss_pred             HHHHHHHHHCCCEEEeCCCcCCCCCCCeEECCEEEEcCCCCCHHHhCCCcCceEEEeccCCHHHHHHH
Confidence            9999999999999999997543  36899999999999999977775 99999999999999999976

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD.

>cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like

Probab=100.00  E-value=2.1e-76  Score=614.10  Aligned_cols=375  Identities=45%  Similarity=0.748  Sum_probs=353.6

Q ss_pred             eecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhh
Q 012806           77 VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLK  156 (456)
Q Consensus        77 v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~  156 (456)
                      ++||.||+++++++.++.+|++.++++|++||+  .|+.++.++|.++|+++++.|+++.++|++++++|+|||..++. 
T Consensus         1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-   77 (456)
T cd07110           1 VINPATEATIGEIPAATAEDVDAAVRAARRAFP--RWKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPLDEAA-   77 (456)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-
Confidence            479999999999999999999999999999999  99999999999999999999999999999999999999999987 


Q ss_pred             ccHHHHHHHHHHHHHhhhHhcC---cccCCC-CCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCC
Q 012806          157 SEVPMVVRLLHYYAGWADKIHG---LTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAE  232 (456)
Q Consensus       157 ~ev~~~~~~l~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~  232 (456)
                      .|+..+++.++||++..+++..   ...+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus        78 ~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~  157 (456)
T cd07110          78 WDVDDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSE  157 (456)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhccCCccccCCCCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECcc
Confidence            5999999999999998877642   222222 245678899999999999999999999999999999999999999999


Q ss_pred             CchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCce
Q 012806          233 QTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPF  312 (456)
Q Consensus       233 ~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~  312 (456)
                      .+|+++..+++++.++|+|+|++++|+|++.+.++.|+.|++++.|.||||+.+|+.|.+.+++ +++|+++|+|||+|+
T Consensus       158 ~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~aa~-~~~~~~lElgG~~~~  236 (456)
T cd07110         158 LTSLTELELAEIAAEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQ-DIKPVSLELGGKSPI  236 (456)
T ss_pred             cchHHHHHHHHHHHHcCCCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhh-cCCeEEEEcCCCCee
Confidence            9999999999999999999999999999887889999999999999999999999999999988 899999999999999


Q ss_pred             EEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHH
Q 012806          313 IIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLR  392 (456)
Q Consensus       313 iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~  392 (456)
                      ||++|+|+|.|++.+++++|+|+||.|++++|||||++++|+|+++|+++++++++|||.++++++||++++.+++++.+
T Consensus       237 iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~  316 (456)
T cd07110         237 IVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVLS  316 (456)
T ss_pred             EECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCeEEeCCcccC--CCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          393 YIRSGIESNATLECGGDRLG--NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       393 ~i~~a~~~Ga~v~~gg~~~~--~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      ++++++.+|+++++||....  +.|+|+.|||+.+++++|+.+.+ +||||++|+.++|.+|+|++
T Consensus       317 ~v~~a~~~Ga~~~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~  382 (456)
T cd07110         317 FIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATEDEAIAL  382 (456)
T ss_pred             HHHHHHhCCCEEEeCCCcccccCCCCcCCCEEEecCCCCChHhhCCCcCCeEEEEecCCHHHHHHH
Confidence            99999999999999997643  46899999999999999977665 99999999999999999875

Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine.

>cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like

Probab=100.00  E-value=2.2e-76  Score=613.51  Aligned_cols=375  Identities=49%  Similarity=0.817  Sum_probs=356.6

Q ss_pred             ecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhc
Q 012806           78 YDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKS  157 (456)
Q Consensus        78 ~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~  157 (456)
                      +||.||+++++++.++.++++.+++.|++||+  .|+.++.++|.++|+++++.|++++++|++++++|+|||..++...
T Consensus         2 ~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~   79 (453)
T cd07115           2 LNPATGELIARVAQASAEDVDAAVAAARAAFE--AWSAMDPAERGRILWRLAELILANADELARLESLDTGKPIRAARRL   79 (453)
T ss_pred             CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHH
Confidence            59999999999999999999999999999999  9999999999999999999999999999999999999999998756


Q ss_pred             cHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHH
Q 012806          158 EVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLT  237 (456)
Q Consensus       158 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~  237 (456)
                      |+..+++.++|++.+.++..+...+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|++
T Consensus        80 ev~~~i~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~  159 (453)
T cd07115          80 DVPRAADTFRYYAGWADKIEGEVIPVRGPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLS  159 (453)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCceecCCCCceEEEEecceeEEEEEcCCCCHHHHHHHHHHHHHhcCCEEEEECCCCCcHH
Confidence            99999999999999988776655444445567899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEEcCC
Q 012806          238 ALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDD  317 (456)
Q Consensus       238 ~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~~d  317 (456)
                      +..+.+++.++|+|+|++++++|++.++++.|..|+++|.|+||||+.+|+.|.+.+++ +++|+++|+||++|+||++|
T Consensus       160 ~~~l~~~~~~aGlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~~~g~~v~~~aa~-~~~~~~lElgG~~p~iV~~d  238 (453)
T cd07115         160 ALRIAELMAEAGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAG-NLKRVSLELGGKSANIVFAD  238 (453)
T ss_pred             HHHHHHHHHhcCcCchheEEEecCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCCeEEEecCCCCceEECCC
Confidence            99999999999999999999999877889999999999999999999999999999988 89999999999999999999


Q ss_pred             CCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHHH
Q 012806          318 ADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSG  397 (456)
Q Consensus       318 aD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a  397 (456)
                      ||++.|++.+++++|.|+||.|+++++||||++++++|+++|+++++++++|+|.++++++||++++++++++.++|+++
T Consensus       239 Adl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a  318 (453)
T cd07115         239 ADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKTQMGPLVSQAQFDRVLDYVDVG  318 (453)
T ss_pred             CCHHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          398 IESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       398 ~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      +++|+++++||......|+|++|||+.+++++|+.+.+ +||||++|+.++|.+|+|++
T Consensus       319 ~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~  377 (453)
T cd07115         319 REEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRI  377 (453)
T ss_pred             HHCCCEEEeCCCCCCCCCceECCEEEecCCCCChHhhCCCcCceEEEEeeCCHHHHHHH
Confidence            99999999999765446899999999999999977775 99999999999999999975

4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD.

>TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain)

Probab=100.00  E-value=3.7e-76  Score=614.72  Aligned_cols=382  Identities=29%  Similarity=0.430  Sum_probs=353.7

Q ss_pred             CCccCceeCCEEeeCCCCCeeeeecCCCC-ceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 012806           55 ISYTKNLINGQFVDAASGKTFPVYDPRTA-EVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIE  133 (456)
Q Consensus        55 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg-e~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~  133 (456)
                      +-..++||||+|+.  ++.+++++||.|+ +++++++.++.+|++.++++|++||+  .|++++..+|.++|+++++.|+
T Consensus        35 ~~~~~~~i~g~~~~--~~~~~~~~nP~t~~e~i~~~~~~~~~dv~~av~~A~~a~~--~W~~~~~~~R~~~L~~~a~~l~  110 (500)
T TIGR01238        35 TWQAAPIIGHSYKA--DGEAQPVTNPADRRDIVGQVFHANLAHVQAAIDSAQQAFP--TWNATPAKERAAKLDRLADLLE  110 (500)
T ss_pred             ceecCceECCEEec--CCCeEEeeCCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHH
Confidence            33458999999986  6788999999995 89999999999999999999999999  9999999999999999999999


Q ss_pred             HhHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHH
Q 012806          134 KNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFT  213 (456)
Q Consensus       134 ~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~  213 (456)
                      +++++|++++++|+|||..++. .|+..+++.++||++..++..+           ...++|+|||++|+|||||+..++
T Consensus       111 ~~~~ela~~~~~e~Gk~~~~a~-~ev~~~i~~l~~~a~~~~~~~~-----------~~~~~P~GVV~~I~pwN~P~~~~~  178 (500)
T TIGR01238       111 LHMPELMALCVREAGKTIHNAI-AEVREAVDFCRYYAKQVRDVLG-----------EFSVESRGVFVCISPWNFPLAIFT  178 (500)
T ss_pred             hHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcC-----------ceeccCcceEEEECCCchHHHHHH
Confidence            9999999999999999999997 5999999999999988765432           135899999999999999999999


Q ss_pred             hHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHH
Q 012806          214 WKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQEL  293 (456)
Q Consensus       214 ~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~  293 (456)
                      +++++||++||+||+|||+.+|+++..+.+++.++|+|+|++++++|++.+.+..|+.|++++.|+||||+.+|+.|.+.
T Consensus       179 ~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~v~~~  258 (500)
T TIGR01238       179 GQISAALAAGNTVIAKPAEQTSLIAYRAVELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQT  258 (500)
T ss_pred             HHHHHHHHcCCEEEEeCCCCccHHHHHHHHHHHHcCCCCCceEEEecCcchHHHHHhcCCCcCeEEEECCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999777889999999999999999999999999999


Q ss_pred             HhhCCC---ccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCC
Q 012806          294 AAKSNL---KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGD  370 (456)
Q Consensus       294 ~a~~~~---~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~  370 (456)
                      +++ ++   +|+++|+|||||+||++|+|+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+
T Consensus       259 aa~-~~~~~~~v~lElGGknp~IV~~dAdld~Aa~~i~~~~f~nsGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~vG~  337 (500)
T TIGR01238       259 LAQ-REDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLTMIQGAMQELKVGV  337 (500)
T ss_pred             Hhh-cccCCceEEEecCCcCcEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceeEEcHhhHHHHHHHHHHHHHhCCCCC
Confidence            987 54   79999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCc---ccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEE
Q 012806          371 PFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGD---RLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIIL  446 (456)
Q Consensus       371 p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~---~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~  446 (456)
                      |.++++++||++++++++++.++|+++++.|++++.++.   +...+|+|++|||+.+  ++|..+.+ +||||++|+.|
T Consensus       338 p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~l~~~~~~~~~~~~~g~f~~PTvl~~--~~~~~~~eE~FgPvl~v~~~  415 (500)
T TIGR01238       338 PHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHGTFVAPTLFEL--DDIAELSEEVFGPVLHVVRY  415 (500)
T ss_pred             CCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeeccCCCCCCCCCeeEcCEEEcc--CCchHhhCCCcCCEEEEEEe
Confidence            999999999999999999999999999999999875432   2224699999999973  57756654 99999999999


Q ss_pred             c--cccccccc
Q 012806          447 C--VVTDCTSI  455 (456)
Q Consensus       447 ~--~~~eai~~  455 (456)
                      +  +.+|+|++
T Consensus       416 ~~~~~deai~~  426 (500)
T TIGR01238       416 KARELDQIVDQ  426 (500)
T ss_pred             CCCCHHHHHHH
Confidence            8  68898864

This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase.

>cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

Probab=100.00  E-value=4.2e-76  Score=610.77  Aligned_cols=372  Identities=30%  Similarity=0.432  Sum_probs=348.6

Q ss_pred             eeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCC-CCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhh
Q 012806           76 PVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGP-WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQS  154 (456)
Q Consensus        76 ~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~-w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a  154 (456)
                      +++||.||+++++++.++.+|++++++.|++||+  . |+.++.++|.++|+++++.|+++.++|++++++|+|||..++
T Consensus         2 ~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~--~~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a   79 (455)
T cd07148           2 EVVNPFDLKPIGEVPTVDWAAIDKALDTAHALFL--DRNNWLPAHERIAILERLADLMEERADELALLIAREGGKPLVDA   79 (455)
T ss_pred             CccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHh--hcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence            5789999999999999999999999999999998  6 567999999999999999999999999999999999999998


Q ss_pred             hhccHHHHHHHHHHHHHhhhHhcCcccCCC-----CCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEe
Q 012806          155 LKSEVPMVVRLLHYYAGWADKIHGLTVPGD-----GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLK  229 (456)
Q Consensus       155 ~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlK  229 (456)
                      . .|+..+++.++|++..+.+..+...+..     .+...+..++|+|||++|+|||||+..+++++++||++||+||+|
T Consensus        80 ~-~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlK  158 (455)
T cd07148          80 K-VEVTRAIDGVELAADELGQLGGREIPMGLTPASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVK  158 (455)
T ss_pred             H-HHHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEee
Confidence            7 5999999999999998887765543321     234568889999999999999999999999999999999999999


Q ss_pred             cCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCC
Q 012806          230 SAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGK  309 (456)
Q Consensus       230 ps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~  309 (456)
                      ||+.+|+++..++++++++|+|+|++++++|+ .+.++.|+.|+++|+|.||||+++|+.|.+.++.  .+|+++|+|||
T Consensus       159 ps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~-~~~~~~L~~~~~v~~v~fTGs~~~G~~i~~~aa~--~~~~~lElGG~  235 (455)
T cd07148         159 PALATPLSCLAFVDLLHEAGLPEGWCQAVPCE-NAVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAP--GTRCALEHGGA  235 (455)
T ss_pred             CCCcccHHHHHHHHHHHHcCCCcCcEEEEeCC-hHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhc--CCcEEEecCCC
Confidence            99999999999999999999999999999985 4678999999999999999999999999998875  48999999999


Q ss_pred             CceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHH
Q 012806          310 SPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQK  389 (456)
Q Consensus       310 ~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~  389 (456)
                      ||+||++|||+|.|++.+++++|+|+||.|++++|||||++++|+|+++|+++++++++|+|+++++++||++++.++++
T Consensus       236 ~p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~  315 (455)
T cd07148         236 APVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDR  315 (455)
T ss_pred             CceEECCCCCHHHHHHHHHHHHHhcCCCCccCCeEEEEcHhHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCcCHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          390 VLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       390 v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      +.++|++++++|+++++||...  .|+|++|||+.+++++|+.+.+ +||||++|+.++|.+|+|++
T Consensus       316 ~~~~i~~a~~~Ga~vl~gg~~~--~~~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~  380 (455)
T cd07148         316 VEEWVNEAVAAGARLLCGGKRL--SDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQ  380 (455)
T ss_pred             HHHHHHHHHhCCCEEEeCCccC--CCCeEcCEEEeCCCCCCHHHhCCCcCCeEEEEecCCHHHHHHH
Confidence            9999999999999999999764  4789999999999999977665 99999999999999999875

Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.

>cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like

Probab=100.00  E-value=3.8e-76  Score=611.88  Aligned_cols=374  Identities=43%  Similarity=0.710  Sum_probs=353.6

Q ss_pred             eecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCC-CCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhh
Q 012806           77 VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWP-KMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSL  155 (456)
Q Consensus        77 v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~-~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~  155 (456)
                      ++||.||+++++++.++.+|++.++++|++|++  .|. .++.++|.++|+++++.|.+++++|++++++|+|||..+++
T Consensus         1 ~~~P~tg~~i~~~~~~~~~dv~~av~~a~~A~~--~~~~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~   78 (454)
T cd07109           1 VFDPSTGEVFARIARGGAADVDRAVQAARRAFE--SGWLRLSPAERGRLLLRIARLIREHADELARLESLDTGKPLTQAR   78 (454)
T ss_pred             CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH
Confidence            469999999999999999999999999999998  776 99999999999999999999999999999999999999998


Q ss_pred             hccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCch
Q 012806          156 KSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTP  235 (456)
Q Consensus       156 ~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p  235 (456)
                       .|+..+++.++||++..++..+...+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus        79 -~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p  157 (454)
T cd07109          79 -ADVEAAARYFEYYGGAADKLHGETIPLGPGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAP  157 (454)
T ss_pred             -HHHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCh
Confidence             5999999999999998888776655544455678999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEEc
Q 012806          236 LTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIF  315 (456)
Q Consensus       236 ~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~  315 (456)
                      +++..+++++.++|+|+|++++++|.+.+.++.|+.|+++|.|.||||+.+|+.|.+.+++ +++|+++|+|||||+||+
T Consensus       158 ~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~-~~~p~~lElgG~~~~iV~  236 (454)
T cd07109         158 LTALRLAELAEEAGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAE-NVVPVTLELGGKSPQIVF  236 (454)
T ss_pred             HHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhh-cCCcEEEECCCCCceEEC
Confidence            9999999999999999999999999777889999999999999999999999999999887 899999999999999999


Q ss_pred             CCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHH
Q 012806          316 DDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIR  395 (456)
Q Consensus       316 ~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~  395 (456)
                      +|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+ .+++||++++++++++.++|+
T Consensus       237 ~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~G~p~~-~~~~gpli~~~~~~~~~~~i~  315 (454)
T cd07109         237 ADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPGLE-DPDLGPLISAKQLDRVEGFVA  315 (454)
T ss_pred             CCCCHHHHHHHHHHHHHhccCCCCccCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCcc-cCcCCCccCHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999986 689999999999999999999


Q ss_pred             HHHHcCCeEEeCCcccC---CCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          396 SGIESNATLECGGDRLG---NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       396 ~a~~~Ga~v~~gg~~~~---~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      +++++|+++++||....   +.|+|++|||+.+++++|+.+.+ +||||++|+.+++.+|||++
T Consensus       316 ~a~~~ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deAi~~  379 (454)
T cd07109         316 RARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEAIAL  379 (454)
T ss_pred             HHHhCCCEEEeCCCcCcccCCCCcEECcEEEecCCCCChhhhCCCCCceEEEEecCCHHHHHHH
Confidence            99999999999987533   36899999999999999977776 99999999999999999975

Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.

>cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like

Probab=100.00  E-value=4.2e-76  Score=611.51  Aligned_cols=374  Identities=40%  Similarity=0.627  Sum_probs=355.2

Q ss_pred             eeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhh
Q 012806           75 FPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQS  154 (456)
Q Consensus        75 ~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a  154 (456)
                      ++++||.||+++++++.++.+|+++++++|++|++  .|+.++..+|.++|+++++.|+++.++|++++++|+|||+.++
T Consensus         1 ~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a   78 (451)
T cd07150           1 FDDLNPADGSVYARVAVGSRQDAERAIAAAYDAFP--AWAATTPSERERILLKAAEIMERRADDLIDLLIDEGGSTYGKA   78 (451)
T ss_pred             CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHH
Confidence            35789999999999999999999999999999999  8999999999999999999999999999999999999999998


Q ss_pred             hhccHHHHHHHHHHHHHhhhHhcCcccCCC-CCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCC
Q 012806          155 LKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQ  233 (456)
Q Consensus       155 ~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~  233 (456)
                      . .|+..+++.+++++.+..+..+...+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus        79 ~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~  157 (451)
T cd07150          79 W-FETTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEE  157 (451)
T ss_pred             H-HHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecccEEEEECCCccHHHHHHHHHHHHHhcCCeEEEECCcc
Confidence            7 5999999999999999887766554433 3456788999999999999999999999999999999999999999999


Q ss_pred             chHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceE
Q 012806          234 TPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFI  313 (456)
Q Consensus       234 ~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~i  313 (456)
                      +|.++..+.++|.++|+|+|++++++|++.+.+..|..|+++|+|.||||+.+|+.|.+.+++ +++++++|+|||||+|
T Consensus       158 ~p~t~~~l~~~~~~ag~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~-~~~~~~lelGG~~~~i  236 (451)
T cd07150         158 TPVIGLKIAEIMEEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGR-HLKKITLELGGKNPLI  236 (451)
T ss_pred             CcHHHHHHHHHHHHhCCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCCceEeecCCCCeeE
Confidence            999999999999999999999999999778889999999999999999999999999999988 8999999999999999


Q ss_pred             EcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHH
Q 012806          314 IFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRY  393 (456)
Q Consensus       314 V~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~  393 (456)
                      |++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++
T Consensus       237 V~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~  316 (451)
T cd07150         237 VLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQ  316 (451)
T ss_pred             ECCCCChHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          394 IRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       394 i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      |++++.+|+++++||..   .|+|++|||+.+++++|+.+.+ +||||++|+.++|.+|+|++
T Consensus       317 i~~a~~~Ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~  376 (451)
T cd07150         317 VEDAVAKGAKLLTGGKY---DGNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALEL  376 (451)
T ss_pred             HHHHHhCCCEEEeCCcc---CCcEEcCEEEeCCCCCCHHHhCCCcCceEEEEEeCCHHHHHHH
Confidence            99999999999999864   4899999999999999977765 99999999999999999875

Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde.

>cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA

Probab=100.00  E-value=9.6e-76  Score=616.07  Aligned_cols=390  Identities=34%  Similarity=0.473  Sum_probs=362.1

Q ss_pred             cCceeCCEEeeCCCCCeeeeecCCC-CceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 012806           58 TKNLINGQFVDAASGKTFPVYDPRT-AEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM  136 (456)
Q Consensus        58 ~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~  136 (456)
                      .-.||+|+|+  .++++++++||.| |+++++++.++.+|++++++.|++|++  .|+.++.++|.++|+++++.|+++.
T Consensus        33 ~~p~i~g~~~--~~~~~~~v~~P~t~g~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~  108 (518)
T cd07125          33 AIPIINGEET--ETGEGAPVIDPADHERTIGEVSLADAEDVDAALAIAAAAFA--GWSATPVEERAEILEKAADLLEANR  108 (518)
T ss_pred             cCceECCEEe--eCCCeEEEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhH
Confidence            3458999997  3688999999999 999999999999999999999999999  9999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcc-cCCCCCcceEEEeeccceEEEEccCCchHHHHHhH
Q 012806          137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLT-VPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWK  215 (456)
Q Consensus       137 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~  215 (456)
                      ++|++++++|+|||..+++ .|+..+++.++++++.+++..+.. .+...+...+..++|+|||++|+|||||+...+++
T Consensus       109 ~~la~~~~~e~Gk~~~~a~-~ev~~~i~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~GVV~~I~p~N~P~~~~~~~  187 (518)
T cd07125         109 GELIALAAAEAGKTLADAD-AEVREAIDFCRYYAAQARELFSDPELPGPTGELNGLELHGRGVFVCISPWNFPLAIFTGQ  187 (518)
T ss_pred             HHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccccCCCCceeEEEEecccEEEEECCcchHHHHHHHH
Confidence            9999999999999999997 599999999999999888766443 33333456788899999999999999999999999


Q ss_pred             HHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHh
Q 012806          216 VAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA  295 (456)
Q Consensus       216 ~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a  295 (456)
                      +++||++||+||+|||+.+|+++..+++++.++|+|+|++++++|++.+.+..|..|+++|+|+||||+.+|+.|.+.++
T Consensus       188 i~~ALaaGN~VVlKps~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa  267 (518)
T cd07125         188 IAAALAAGNTVIAKPAEQTPLIAARAVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALA  267 (518)
T ss_pred             HHHHHHcCCEEEEeCCCcCcHHHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHhcCCCcCEEEEECCHHHHHHHHHHhh
Confidence            99999999999999999999999999999999999999999999977778899999999999999999999999999887


Q ss_pred             hC--CCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCC
Q 012806          296 KS--NLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFK  373 (456)
Q Consensus       296 ~~--~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~  373 (456)
                      ++  .++|+++|+|||+|+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||.+
T Consensus       268 ~~~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~iv~g~f~nsGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~  347 (518)
T cd07125         268 ERDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIAERFIEMLKGAMASLKVGDPWD  347 (518)
T ss_pred             hccCCCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcchhHHHHHHHHHHHHhcCCccCCCC
Confidence            52  3799999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEc--ccc
Q 012806          374 SGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILC--VVT  450 (456)
Q Consensus       374 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~--~~~  450 (456)
                      +++++||++++++++++.++|++++. ++++++||......|+|++|||+.++  +|+.+.+ +||||++|+.++  +.+
T Consensus       348 ~~~~~gpli~~~~~~~v~~~i~~a~~-~~~vl~gg~~~~~~g~~~~Ptvl~~v--~~~i~~eE~FgPVl~v~~~~~~~~d  424 (518)
T cd07125         348 LSTDVGPLIDKPAGKLLRAHTELMRG-EAWLIAPAPLDDGNGYFVAPGIIEIV--GIFDLTTEVFGPILHVIRFKAEDLD  424 (518)
T ss_pred             CCCCcCCCcCHHHHHHHHHHHHHHHh-CCEEEeCCCcCCCCCeEEccEEEeec--CChHhhCcccCCeEEEEEeCCCCHH
Confidence            99999999999999999999999987 46899998753336999999999988  7766665 999999999999  999


Q ss_pred             ccccc
Q 012806          451 DCTSI  455 (456)
Q Consensus       451 eai~~  455 (456)
                      |||++
T Consensus       425 eAi~~  429 (518)
T cd07125         425 EAIED  429 (518)
T ss_pred             HHHHH
Confidence            99875

The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.

>cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1

Probab=100.00  E-value=4.9e-76  Score=611.51  Aligned_cols=374  Identities=43%  Similarity=0.700  Sum_probs=354.2

Q ss_pred             eecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhh
Q 012806           77 VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLK  156 (456)
Q Consensus        77 v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~  156 (456)
                      ++||.||+++++++.++.+|++.+++.|++|++  .|++++.++|.++|+++++.|.++.++|++++++|+|||..+++ 
T Consensus         1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-   77 (457)
T cd07090           1 VIEPATGEVLATVHCAGAEDVDLAVKSAKAAQK--EWSATSGMERGRILRKAADLLRERNDEIARLETIDNGKPIEEAR-   77 (457)
T ss_pred             CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-
Confidence            469999999999999999999999999999999  99999999999999999999999999999999999999999987 


Q ss_pred             ccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchH
Q 012806          157 SEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL  236 (456)
Q Consensus       157 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~  236 (456)
                      .|+..+++.++||++..+++.+...+...+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.
T Consensus        78 ~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~~~  157 (457)
T cd07090          78 VDIDSSADCLEYYAGLAPTLSGEHVPLPGGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPL  157 (457)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCeeeccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCeeeecCCCcCcH
Confidence            59999999999999988877665554444566788999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEEcC
Q 012806          237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFD  316 (456)
Q Consensus       237 ~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~~  316 (456)
                      ++..+.+++.++|+|+|++++++|++ +.+..|+.|+++++|.||||+.+|+.|.+.+++ +++|+++|+|||+|+||++
T Consensus       158 ~~~~l~~~~~~aGlP~g~~~~v~g~~-~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~-~~~~~~lelgG~~p~iV~~  235 (457)
T cd07090         158 TALLLAEILTEAGLPDGVFNVVQGGG-ETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAK-GIKHVTLELGGKSPLIIFD  235 (457)
T ss_pred             HHHHHHHHHHHcCCCcccEEEEeCCh-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc-cCCceEEecCCCCceEECC
Confidence            99999999999999999999999854 588999999999999999999999999999988 8999999999999999999


Q ss_pred             CCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHH
Q 012806          317 DADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRS  396 (456)
Q Consensus       317 daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~  396 (456)
                      |||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++++++||++++++++++.++|++
T Consensus       236 dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~  315 (457)
T cd07090         236 DADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMGALISEEHLEKVLGYIES  315 (457)
T ss_pred             CCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccCHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHcCCeEEeCCcccC-----CCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          397 GIESNATLECGGDRLG-----NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       397 a~~~Ga~v~~gg~~~~-----~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      ++++|+++++||....     +.|+|++|||+.+++++|+.+.+ +||||++|+.+++.+|+|++
T Consensus       316 a~~~Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~  380 (457)
T cd07090         316 AKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRR  380 (457)
T ss_pred             HHHCCCEEEECCCcCcccccCCCCeeECCEEEecCCCCChHHhCCCCCCeEEEEEECCHHHHHHH
Confidence            9999999999997532     35899999999999999977765 99999999999999999875

NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis.

>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=4.7e-76  Score=634.05  Aligned_cols=387  Identities=25%  Similarity=0.317  Sum_probs=349.0

Q ss_pred             cCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHh-cccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 012806           58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKA-FDEGPWPKMTPYERSRIMLRAADLIEKNM  136 (456)
Q Consensus        58 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a-~~~~~w~~~~~~~R~~iL~~~a~~l~~~~  136 (456)
                      .++||||+|+.+ ++++++++||.||+++++++.++ +|+++||++|++| |+  .|++++..+|.++|+++++.|+++.
T Consensus         5 ~~~~i~G~~~~~-~~~~~~~~nP~tg~~i~~~~~~~-~dv~~Av~~A~~A~~~--~W~~~~~~eR~~~L~~~a~~l~~~~   80 (675)
T PRK11563          5 LQSYVAGRWQTG-QGEGRPLHDAVTGEPVARVSSEG-LDFAAALAYAREVGGP--ALRALTFHERAAMLKALAKYLLERK   80 (675)
T ss_pred             ccceecCEEEcC-CCCceeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhhhh--hhhcCCHHHHHHHHHHHHHHHHHhH
Confidence            478999999865 56789999999999999999987 6999999999998 68  8999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhc--------CcccCCC--CCcceEEEeecc-ceEEEEccC
Q 012806          137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH--------GLTVPGD--GNYHIQTLHEPI-GVAGQIVPW  205 (456)
Q Consensus       137 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~--------~~~~~~~--~~~~~~~~~~P~-Gvv~~i~p~  205 (456)
                      ++|+++ ++|+|||+.+++ .|+..+++.++||+..+++..        ++..+..  +....+..++|+ |||++|+||
T Consensus        81 ~ela~l-~~e~GK~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~GVv~~I~Pw  158 (675)
T PRK11563         81 EELYAL-SAQTGATRRDSW-IDIEGGIGTLFTYASKGRRELPNDTVLVEGEVEPLSKGGTFAGRHILTPLEGVAVHINAF  158 (675)
T ss_pred             HHHHHH-HHHhCCCHHHHH-HHHHHHHHHHHHHHHHHhhhccccccccCCccccccCCCcccceEEEeecCceEEEECCC
Confidence            999995 899999999998 599999999999999886643        3332221  112257888997 999999999


Q ss_pred             CchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcC-CCCCcEEEEeCCchhhHHHHhcCCCccEEEEecCh
Q 012806          206 NFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAG-LPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHC  284 (456)
Q Consensus       206 N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aG-lP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~  284 (456)
                      |||+.++++++++||++||+||+|||+.+|+++..+.+++.++| +|+|++|+++|++.   ..+..++.+++|.||||+
T Consensus       159 NfP~~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~~~eaG~~P~gv~~vv~g~~~---~~~~~~~~i~~v~FTGS~  235 (675)
T PRK11563        159 NFPVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVESGLLPEGALQLICGSAG---DLLDHLDGQDVVTFTGSA  235 (675)
T ss_pred             chHHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHcCCCCCCcEEEeeCCHH---HHhhcCCCCCEEEEECcH
Confidence            99999999999999999999999999999999999999999999 99999999998532   334444689999999999


Q ss_pred             hHHHHHHHHH--hhCCCccEEEecCCCCceEEcCCCC-----HHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHH
Q 012806          285 DTGKIVQELA--AKSNLKPVTLELGGKSPFIIFDDAD-----VDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVE  357 (456)
Q Consensus       285 ~~g~~i~~~~--a~~~~~~v~lelgG~~~~iV~~daD-----~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~  357 (456)
                      ++|+.|.+.+  +. +++|+++|+|||||+||++|||     +|.|++.+++++|.|+||.|++++|+|||+++||+|++
T Consensus       236 ~~G~~i~~~~~a~~-~~~~~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~  314 (675)
T PRK11563        236 ATAQKLRAHPNVVA-NSVPFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALVDAVIE  314 (675)
T ss_pred             HHHHHHHhhhhhhh-CCceEEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHHHhCCCccccceeEEeeHHHHHHHHH
Confidence            9999999853  35 8999999999999999999995     99999999999999999999999999999999999999


Q ss_pred             HHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCccc-------CCCCceEecEEEecCCC--
Q 012806          358 KAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRL-------GNRGYFVQPTVFSDVTV--  428 (456)
Q Consensus       358 ~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~-------~~~g~~i~PtVl~~v~~--  428 (456)
                      +|+++++++++|+|+++++++||++++.+++++.++|++++++ |++++||...       ...|+|++||||.++++  
T Consensus       315 ~l~~~~~~l~vG~p~d~~t~~GPli~~~~~~~i~~~i~~a~~~-a~vl~Gg~~~~~~~~~~~~~g~f~~PTvl~~v~~~~  393 (675)
T PRK11563        315 ALRARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAA-AEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDPLE  393 (675)
T ss_pred             HHHHHHhcCccCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhC-CEEEECCcccccccCCCCCCCeeECCEEEeccCchh
Confidence            9999999999999999999999999999999999999999998 9999999531       13599999999999998  


Q ss_pred             ChHhhhc-cccceEEeEEEccccccccc
Q 012806          429 SFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       429 ~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      +++.+.+ +||||++|+.+++.+|+|++
T Consensus       394 ~~~i~~eEiFGPVl~V~~~~~~~eai~~  421 (675)
T PRK11563        394 APAVHDVEAFGPVSTLMPYDDLDEAIEL  421 (675)
T ss_pred             hhhHhhccccCCceEEEecCCHHHHHHH
Confidence            4656664 99999999999999999875

>cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11

Probab=100.00  E-value=1.9e-75  Score=609.68  Aligned_cols=389  Identities=35%  Similarity=0.515  Sum_probs=365.7

Q ss_pred             cCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHHHHHHHHHHhH
Q 012806           58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKM-TPYERSRIMLRAADLIEKNM  136 (456)
Q Consensus        58 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~-~~~~R~~iL~~~a~~l~~~~  136 (456)
                      .++||||+|+.+. +++++++||.||+++++++.++.+|+++++++|++|++  .|+++ +.++|.++|+++++.|.+++
T Consensus         2 ~~~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~~R~~~L~~~a~~l~~~~   78 (473)
T cd07082           2 FKYLINGEWKESS-GKTIEVYSPIDGEVIGSVPALSALEILEAAETAYDAGR--GWWPTMPLEERIDCLHKFADLLKENK   78 (473)
T ss_pred             CCceECCEEecCC-CCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhcCCHHHHHHHHHHHHHHHHHHH
Confidence            4689999998754 68999999999999999999999999999999999999  99998 99999999999999999999


Q ss_pred             HHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCC-----CCcceEEEeeccceEEEEccCCchHHH
Q 012806          137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-----GNYHIQTLHEPIGVAGQIVPWNFPLLL  211 (456)
Q Consensus       137 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv~~i~p~N~P~~~  211 (456)
                      ++|++++++|+|||..++. .|+..+++.++++++...++.+...+.+     .+...+..++|+|||++|+|||||+..
T Consensus        79 ~el~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~  157 (473)
T cd07082          79 EEVANLLMWEIGKTLKDAL-KEVDRTIDYIRDTIEELKRLDGDSLPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNL  157 (473)
T ss_pred             HHHHHHHHHHcCCcHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccccccccCCCceeEEEEecceEEEEECCcCcHHHH
Confidence            9999999999999999987 5999999999999998887765543321     244568899999999999999999999


Q ss_pred             HHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHH
Q 012806          212 FTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQ  291 (456)
Q Consensus       212 ~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~  291 (456)
                      +++++++||++||+||+|||+.+|.++..+.++|+++|+|+|++++++|++.+.+..|..|+++|.|+||||+++|+.|.
T Consensus       158 ~~~~i~~AL~aGN~vilKps~~~~~~~~~l~~~l~~aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~  237 (473)
T cd07082         158 TVSKLIPALIMGNTVVFKPATQGVLLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLK  237 (473)
T ss_pred             HHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999998888899999999999999999999999999


Q ss_pred             HHHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCC
Q 012806          292 ELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDP  371 (456)
Q Consensus       292 ~~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p  371 (456)
                      +.++   ++|+++|+||+||+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|
T Consensus       238 ~~a~---~~~~~lelgg~n~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~~  314 (473)
T cd07082         238 KQHP---MKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADELVELLKEEVAKLKVGMP  314 (473)
T ss_pred             HHhC---CCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCcCCCCeEEEEcHHHHHHHHHHHHHHHhcCCCCCC
Confidence            8875   6899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEcccc
Q 012806          372 FKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVT  450 (456)
Q Consensus       372 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~  450 (456)
                      .++++++||++++++++++.+++++++.+|+++++||...  .|+|++|||+.+++++|+.+.+ +||||++|+.+++.+
T Consensus       315 ~~~~~~~gp~i~~~~~~~~~~~~~~a~~~ga~~~~gg~~~--~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~  392 (473)
T cd07082         315 WDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGRE--GGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIE  392 (473)
T ss_pred             CCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC--CCeEEeeEEEecCCCCCHHHhCcCcCceEEEEEeCCHH
Confidence            9999999999999999999999999999999999999763  3899999999999999977764 999999999999999


Q ss_pred             ccccc
Q 012806          451 DCTSI  455 (456)
Q Consensus       451 eai~~  455 (456)
                      |+|++
T Consensus       393 eai~~  397 (473)
T cd07082         393 EAIEL  397 (473)
T ss_pred             HHHHH
Confidence            99875

NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants.

>cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like

Probab=100.00  E-value=1.9e-75  Score=607.06  Aligned_cols=377  Identities=47%  Similarity=0.752  Sum_probs=354.8

Q ss_pred             eecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhh
Q 012806           77 VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLK  156 (456)
Q Consensus        77 v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~  156 (456)
                      ++||.||+++++++.++.+|++.++++|++|++++.|+.++.++|.++|+++++.|.+++++|++++++|+|||..+++ 
T Consensus         1 ~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~-   79 (457)
T cd07114           1 SINPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAEELAELETRDNGKLIRETR-   79 (457)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH-
Confidence            3699999999999999999999999999999974469999999999999999999999999999999999999999987 


Q ss_pred             ccHHHHHHHHHHHHHhhhHhcCcccCCC-CCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCch
Q 012806          157 SEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTP  235 (456)
Q Consensus       157 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p  235 (456)
                      .|+..+++.+++++...++..+...+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus        80 ~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~Vilkps~~~p  159 (457)
T cd07114          80 AQVRYLAEWYRYYAGLADKIEGAVIPVDKGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTP  159 (457)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHhcCCeEEeECCccch
Confidence            5999999999999988877655444432 345678899999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEEc
Q 012806          236 LTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIF  315 (456)
Q Consensus       236 ~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~  315 (456)
                      +++..++++|+++|+|+|++++++|++.+.+..|..|+++++|.||||+.+|+.+.+.+++ +++|+++|+||+||+||+
T Consensus       160 ~~~~~l~~~l~~aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~~~~iV~  238 (457)
T cd07114         160 ASTLELAKLAEEAGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAE-NLAPVTLELGGKSPNIVF  238 (457)
T ss_pred             HHHHHHHHHHHHcCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCeEEEecCCCCeeEEC
Confidence            9999999999999999999999999877889999999999999999999999999999988 899999999999999999


Q ss_pred             CCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHH
Q 012806          316 DDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIR  395 (456)
Q Consensus       316 ~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~  395 (456)
                      +|||++.|++.+++++|+|+||.|+++++||||++++++|+++|+++++++++|+|.++++++||++++++++++.++|+
T Consensus       239 ~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~  318 (457)
T cd07114         239 DDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDPETQMGPLATERQLEKVERYVA  318 (457)
T ss_pred             CCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCeEEeCCcccC----CCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          396 SGIESNATLECGGDRLG----NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       396 ~a~~~Ga~v~~gg~~~~----~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      +++++|+++++||....    ..|+|++|||+.+++++|+.+.+ +||||++|+.++|.+|+|++
T Consensus       319 ~a~~~ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~  383 (457)
T cd07114         319 RAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIAL  383 (457)
T ss_pred             HHHHCCCEEEeCCCccccccCCCCCEECCEEEeCCCCCChhhhcCCcCceEEEeccCCHHHHHHH
Confidence            99999999999997643    35899999999999999977775 99999999999999999875

Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD.

>cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like

Probab=100.00  E-value=1.9e-75  Score=606.35  Aligned_cols=372  Identities=34%  Similarity=0.510  Sum_probs=349.0

Q ss_pred             ecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhc
Q 012806           78 YDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKS  157 (456)
Q Consensus        78 ~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~  157 (456)
                      .||.||+++++++.++.+|+++++++|++||+  .|+.++.++|.++|+++++.|++++++|++++++|+||+..++. .
T Consensus         1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~-~   77 (454)
T cd07101           1 EAPFTGEPLGELPQSTPADVEAAFARARAAQR--AWAARPFAERAAVFLRFHDLVLERRDELLDLIQLETGKARRHAF-E   77 (454)
T ss_pred             CcCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHH-H
Confidence            38999999999999999999999999999999  99999999999999999999999999999999999999999987 6


Q ss_pred             cHHHHHHHHHHHHHhhhHhcCcccC---CCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCc
Q 012806          158 EVPMVVRLLHYYAGWADKIHGLTVP---GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQT  234 (456)
Q Consensus       158 ev~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~  234 (456)
                      |+..++..++|++..+.+..+....   .......+..++|+|||++|+|||||+...++++++||++||+||+|||+.+
T Consensus        78 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~  157 (454)
T cd07101          78 EVLDVAIVARYYARRAERLLKPRRRRGAIPVLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQT  157 (454)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEEeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccc
Confidence            9999999999999988776544321   1123456889999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEE
Q 012806          235 PLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFII  314 (456)
Q Consensus       235 p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV  314 (456)
                      |+++..+.+++.++|+|+|++++++|++.+.+..|..|  ++.|.||||+.+|+.|.+.+++ +++|+++|+||+||+||
T Consensus       158 p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~--~~~V~fTGs~~~g~~i~~~aa~-~~~~~~lElgG~~p~iV  234 (454)
T cd07101         158 ALTALWAVELLIEAGLPRDLWQVVTGPGSEVGGAIVDN--ADYVMFTGSTATGRVVAERAGR-RLIGCSLELGGKNPMIV  234 (454)
T ss_pred             hHHHHHHHHHHHHcCcCCCcEEEEeCCcHHHHHHHHhC--CCEEEEECCHHHHHHHHHHHHh-cCCcEEEECCCCceEEE
Confidence            99999999999999999999999999888889999986  6889999999999999999988 89999999999999999


Q ss_pred             cCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHH
Q 012806          315 FDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYI  394 (456)
Q Consensus       315 ~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i  394 (456)
                      ++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||++++++++++.++|
T Consensus       235 ~~dAdl~~a~~~i~~~~~~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~~~~~~~~~gpli~~~~~~~v~~~v  314 (454)
T cd07101         235 LEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHV  314 (454)
T ss_pred             CCCCCHHHHHHHHHHHHHhcCCCCcccCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHcCCeEEeCCcccC-CCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          395 RSGIESNATLECGGDRLG-NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       395 ~~a~~~Ga~v~~gg~~~~-~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      ++++++|+++++||.... ..|+|++|||+.+++++|+.+.+ +||||++|+.|+|.+|+|++
T Consensus       315 ~~a~~~Ga~vl~gg~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~  377 (454)
T cd07101         315 DDAVAKGATVLAGGRARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIEL  377 (454)
T ss_pred             HHHHHCCCEEEeCCCCCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEeeCCHHHHHHH
Confidence            999999999999997533 35799999999999999977775 99999999999999999975

Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s).

>cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like

Probab=100.00  E-value=3.9e-75  Score=602.98  Aligned_cols=371  Identities=40%  Similarity=0.618  Sum_probs=348.2

Q ss_pred             eecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhh
Q 012806           77 VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLK  156 (456)
Q Consensus        77 v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~  156 (456)
                      ++||.||+++++++.++.+|++++++.|++||+  .|+.++..+|.++|+++++.|.+++++|++++++|+|||..++. 
T Consensus         1 ~~~P~tg~~~~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-   77 (446)
T cd07106           1 VINPATGEVFASAPVASEAQLDQAVAAAKAAFP--GWSATPLEERRAALLAIADAIEANAEELARLLTLEQGKPLAEAQ-   77 (446)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-
Confidence            469999999999999999999999999999999  99999999999999999999999999999999999999999987 


Q ss_pred             ccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchH
Q 012806          157 SEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL  236 (456)
Q Consensus       157 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~  236 (456)
                      .|+..+++.++++++...  .+.......+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus        78 ~ev~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~  155 (446)
T cd07106          78 FEVGGAVAWLRYTASLDL--PDEVIEDDDTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPL  155 (446)
T ss_pred             HHHHHHHHHHHHHHhhhh--cCccccCCCCceEEEEEEcceEEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCccchH
Confidence            599999999999988763  222222223456789999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEEcC
Q 012806          237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFD  316 (456)
Q Consensus       237 ~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~~  316 (456)
                      ++..++++++++ +|+|++++++| +.+.+..|..|+++|.|+||||+.+|+.|.+.+++ +++|+++|+|||||+||++
T Consensus       156 ~~~~l~~~~~~~-lP~g~~~~v~g-~~~~~~~l~~~~~vd~V~fTGs~~~g~~v~~~aa~-~~~~~~lElGG~~p~iV~~  232 (446)
T cd07106         156 CTLKLGELAQEV-LPPGVLNVVSG-GDELGPALTSHPDIRKISFTGSTATGKKVMASAAK-TLKRVTLELGGNDAAIVLP  232 (446)
T ss_pred             HHHHHHHHHHHh-CCcCeEEEeeC-ChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCeeEEecCCCCeeEECC
Confidence            999999999995 99999999998 45688999999999999999999999999999888 8999999999999999999


Q ss_pred             CCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHH
Q 012806          317 DADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRS  396 (456)
Q Consensus       317 daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~  396 (456)
                      |||+|.|++.+++++|+|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++++++++.++|++
T Consensus       233 dADl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~i~~  312 (446)
T cd07106         233 DVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKELVED  312 (446)
T ss_pred             CCCHHHHHHHHHHHHHHhcCCCCCCCcEEEEccccHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          397 GIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       397 a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      ++.+|+++++||......|+|++|||+.+++++|+.+.+ +||||++|+.++|.+|+|++
T Consensus       313 a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v~~~~~~~eai~~  372 (446)
T cd07106         313 AKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIAR  372 (446)
T ss_pred             HHHCCCEEEeCCCcCCCCCeeEcCEEEeCCCCCCHHHhcCccCCeEEEEeeCCHHHHHHH
Confidence            999999999999865456899999999999999977765 99999999999999999975

Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD.

>cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12

Probab=100.00  E-value=9.2e-75  Score=599.62  Aligned_cols=380  Identities=22%  Similarity=0.267  Sum_probs=342.6

Q ss_pred             ceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCC--CCCCHHHH----HHHHHHHHHHHH
Q 012806           60 NLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPW--PKMTPYER----SRIMLRAADLIE  133 (456)
Q Consensus        60 ~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w--~~~~~~~R----~~iL~~~a~~l~  133 (456)
                      +||||+|+.  ++++++++||.||+++++++.++.+|+++|+++|++||+  .|  .+++..+|    .++|.++++.|+
T Consensus         1 ~~i~g~~~~--~~~~~~~~nP~t~~~i~~~~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~~~R~l~~~~il~~~a~~l~   76 (489)
T cd07126           1 NLVAGKWKG--ASNYTTLLDPLNGDKFISVPDTDEDEINEFVDSLRQCPK--SGLHNPLKNPERYLLYGDVSHRVAHELR   76 (489)
T ss_pred             CcCCCEEec--CCCcEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hccccCCCHHHHhhhHHHHHHHHHHHHH
Confidence            479999986  357899999999999999999999999999999999999  66  66889999    899999999999


Q ss_pred             Hh--HHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCccc--CC-CCCcceEEEeeccceEEEEccCCch
Q 012806          134 KN--MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTV--PG-DGNYHIQTLHEPIGVAGQIVPWNFP  208 (456)
Q Consensus       134 ~~--~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~P~Gvv~~i~p~N~P  208 (456)
                      ++  .++|++++++|+|||+.+++ .|+..+++.++||++...+..+...  +. ..+...+++++|+|||++|+|||||
T Consensus        77 ~~~~~~~la~~~~~e~GK~~~~a~-~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~v~r~P~GVV~~I~PwNfP  155 (489)
T cd07126          77 KPEVEDFFARLIQRVAPKSDAQAL-GEVVVTRKFLENFAGDQVRFLARSFNVPGDHQGQQSSGYRWPYGPVAIITPFNFP  155 (489)
T ss_pred             cCCCHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCceeccCCCCCCceeEEEEecceEEEEECCCchH
Confidence            98  59999999999999999987 6999999999999998877665543  21 1244578999999999999999999


Q ss_pred             HHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHH
Q 012806          209 LLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGK  288 (456)
Q Consensus       209 ~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~  288 (456)
                      +.+.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.+ +..+..|+++++|+||||+++|+
T Consensus       156 ~~l~~~~ia~ALaaGN~VVlKPSe~tp~~~~~l~~~~~~aGlP~gv~~vv~G~~~~-~~~l~~~~~v~~V~FTGS~~vGr  234 (489)
T cd07126         156 LEIPALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPT-MNKILLEANPRMTLFTGSSKVAE  234 (489)
T ss_pred             HHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCcCcCcEEEEeCCchh-HHHHhcCCCCCEEEEECCHHHHH
Confidence            99999999999999999999999999999999999999999999999999997665 45578889999999999999999


Q ss_pred             HHHHHHhhCCCccEEEecCCCCceEEcCCC-CHHHHHHHHHHHhhhcCCCccccCccccccccc-HHHHHHHHHHHHhhh
Q 012806          289 IVQELAAKSNLKPVTLELGGKSPFIIFDDA-DVDQAVELAHFALFYNQGQCCCAGSRTYVHERV-YDEFVEKAKARAMRR  366 (456)
Q Consensus       289 ~i~~~~a~~~~~~v~lelgG~~~~iV~~da-D~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v-~~~f~~~l~~~~~~~  366 (456)
                      .|...++    +++.+|+||++|+||++|+ |+|.+++.+++++|.|+||.|++++|+|||+++ +|+|+++|++.++++
T Consensus       235 ~i~~~~g----~k~~lElgg~~~~IV~~Da~dld~a~~~~~~g~f~naGQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~  310 (489)
T cd07126         235 RLALELH----GKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQAGILDKLKALAEQR  310 (489)
T ss_pred             HHHHHhC----CCEEeecCCCCceEECCCcccHHHHHHHHHHHHHhcCCCcCCCCceEEEeCcchHHHHHHHHHHHHHhc
Confidence            9987764    4789999999999999999 999999999999999999999999999999996 689999999999999


Q ss_pred             hcCCCCCCCCccCCCCCHHHHHHHHHHHHHHHH-cCCeEEeCCcccCC----CC-ceEecEEEec------CCCChHhhh
Q 012806          367 IVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIE-SNATLECGGDRLGN----RG-YFVQPTVFSD------VTVSFISLL  434 (456)
Q Consensus       367 ~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~-~Ga~v~~gg~~~~~----~g-~~i~PtVl~~------v~~~~~~~~  434 (456)
                      ++|+     +++||+++.. .+++.++|+++++ +|+++++||.....    .+ .|++||||..      ++++|+++.
T Consensus       311 ~~g~-----~~~Gpli~~~-~~~v~~~i~~a~~~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~~~~~~~i~~  384 (489)
T cd07126         311 KLED-----LTIGPVLTWT-TERILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVT  384 (489)
T ss_pred             ccCC-----CcCCCCcCHH-HHHHHHHHHHHHhCCCCEEEeCCcccccccccCCcceecCeEEEeccccccCCCCCHHHh
Confidence            9875     4789999998 8999999999997 99999999976432    23 3899999952      677997777


Q ss_pred             c-cccceEEeEEEcc--ccccccc
Q 012806          435 Q-FLIPIFSFIILCV--VTDCTSI  455 (456)
Q Consensus       435 ~-~fgPv~~vv~~~~--~~eai~~  455 (456)
                      + +||||++|+.|+|  .+|+|++
T Consensus       385 eEiFGPVl~V~~~~~~~~deai~~  408 (489)
T cd07126         385 TEVFGPFQVVTEYKDEQLPLVLEA  408 (489)
T ss_pred             CCCcCCEEEEEEECCCCHHHHHHH
Confidence            5 9999999999999  7788865

Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences.

>PLN02174 aldehyde dehydrogenase family 3 member H1

Probab=100.00  E-value=6.4e-75  Score=599.43  Aligned_cols=355  Identities=23%  Similarity=0.339  Sum_probs=328.4

Q ss_pred             CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHH
Q 012806           92 GDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAG  171 (456)
Q Consensus        92 ~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~  171 (456)
                      -...|+++++++|++||+  .|+.++..+|.++|+++++.|++|.++|++++++|+|||..++...|+..+++.++|+++
T Consensus         7 ~~~~~v~~av~~a~~af~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~l~~e~GKp~~~a~~~Ev~~~~~~~~~~~~   84 (484)
T PLN02174          7 FGAADASILVTELRRSFD--DGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELESSVYEVSLLRNSIKLALK   84 (484)
T ss_pred             cCHHHHHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            367899999999999999  899999999999999999999999999999999999999999875699999999999999


Q ss_pred             hhhHhcC----cccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHH
Q 012806          172 WADKIHG----LTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHE  247 (456)
Q Consensus       172 ~~~~~~~----~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~  247 (456)
                      ..++..+    .......+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.+
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l~~l~~~  164 (484)
T PLN02174         85 QLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQ  164 (484)
T ss_pred             HHHHHhcccccccccccCCcceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHH
Confidence            8877665    222222234568899999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHH
Q 012806          248 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELA  327 (456)
Q Consensus       248 aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i  327 (456)
                       |+|+|++|+|+|.+ +.+..|.. +++|+|+||||+.+|+.|++.+++ +++|+++|||||||+||++|||+|.|++.+
T Consensus       165 -~lp~gvv~vv~G~~-~~~~~l~~-~~vd~V~FTGS~~~G~~I~~~aa~-~l~~v~LELGGk~p~iV~~dADl~~Aa~~i  240 (484)
T PLN02174        165 -YLDSSAVRVVEGAV-TETTALLE-QKWDKIFYTGSSKIGRVIMAAAAK-HLTPVVLELGGKSPVVVDSDTDLKVTVRRI  240 (484)
T ss_pred             -hCCCCEEEEEECCh-HHHHHHhc-ccCCEEEEECChHHHHHHHHHHHh-cCCcEEEecCCCCeEEEcCCCCHHHHHHHH
Confidence             69999999999844 45666776 899999999999999999999998 899999999999999999999999999999


Q ss_pred             HHHhh-hcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEe
Q 012806          328 HFALF-YNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLEC  406 (456)
Q Consensus       328 ~~~~~-~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~  406 (456)
                      ++++| .|+||.|++++|+|||++++|+|+++|+++++++++|+|.+ ++++||++++.+++++.++|+++ ++|+++++
T Consensus       241 ~~g~f~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~-~~~~Gpli~~~~~~~v~~~i~~a-~~ga~~~~  318 (484)
T PLN02174        241 IAGKWGCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKNPME-SKDMSRIVNSTHFDRLSKLLDEK-EVSDKIVY  318 (484)
T ss_pred             HHHHhhCCCCCCCCcCcEEEEeHHHHHHHHHHHHHHHHhhcCCCCcc-cCCcCCCCCHHHHHHHHHHHHHH-HcCCEEEE
Confidence            99999 69999999999999999999999999999999999999987 78999999999999999999998 78999999


Q ss_pred             CCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          407 GGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       407 gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      ||... ..|+|++|||+.+++++|+++.| +||||++|+.++|.+|+|++
T Consensus       319 GG~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eai~~  367 (484)
T PLN02174        319 GGEKD-RENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDV  367 (484)
T ss_pred             CCCcC-CCCCEEEEEEEecCCCCChhhcCCcCCCeEEEecCCCHHHHHHH
Confidence            99763 46899999999999999977775 99999999999999999875

>cd07099 ALDH_DDALDH Methylomonas sp

Probab=100.00  E-value=1.4e-74  Score=600.46  Aligned_cols=372  Identities=35%  Similarity=0.532  Sum_probs=349.7

Q ss_pred             ecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhc
Q 012806           78 YDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKS  157 (456)
Q Consensus        78 ~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~  157 (456)
                      +||.||+++++++.++.+|+++++++|++||+  .|+.++.++|.++|+++++.|++++++|++++++|+|||..++. .
T Consensus         1 ~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~-~   77 (453)
T cd07099           1 RNPATGEVLGEVPVTDPAEVAAAVARARAAQR--AWAALGVEGRAQRLLRWKRALADHADELAELLHAETGKPRADAG-L   77 (453)
T ss_pred             CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-H
Confidence            48999999999999999999999999999999  89999999999999999999999999999999999999999877 6


Q ss_pred             cHHHHHHHHHHHHHhhhHhcCcc-cCC---CCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCC
Q 012806          158 EVPMVVRLLHYYAGWADKIHGLT-VPG---DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQ  233 (456)
Q Consensus       158 ev~~~~~~l~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~  233 (456)
                      |+..+++.++|+++.+.+..+.. .+.   ..+...+++++|+|||++|+|||||+..+++++++||++||+||+|||+.
T Consensus        78 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~ALaaGN~vilKps~~  157 (453)
T cd07099          78 EVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEV  157 (453)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCccccCcccCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCcc
Confidence            99999999999999887765443 221   13456788999999999999999999999999999999999999999999


Q ss_pred             chHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceE
Q 012806          234 TPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFI  313 (456)
Q Consensus       234 ~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~i  313 (456)
                      +|+++..|.++|.++|+|+|++++++|++ +.+..|++| .+|.|+||||+++|+.|.+.+++ +++|+++|+||+||+|
T Consensus       158 ~p~~~~~l~~~l~~ag~P~g~~~vv~g~~-~~~~~l~~~-~vd~V~ftGs~~~g~~i~~~aa~-~~~~~~lelgG~~p~i  234 (453)
T cd07099         158 TPLVGELLAEAWAAAGPPQGVLQVVTGDG-ATGAALIDA-GVDKVAFTGSVATGRKVMAAAAE-RLIPVVLELGGKDPMI  234 (453)
T ss_pred             chHHHHHHHHHHHHcCCCCCeEEEEeCCc-hHHHHHhcC-CCCEEEEECCHHHHHHHHHHHHh-cCCeEEEECCCCCeEE
Confidence            99999999999999999999999999966 678888887 59999999999999999999988 8999999999999999


Q ss_pred             EcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHH
Q 012806          314 IFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRY  393 (456)
Q Consensus       314 V~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~  393 (456)
                      |++|+|++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.|+++++||++++.+++++.++
T Consensus       235 V~~dadl~~a~~~i~~~~~~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~~~~~~~~~gp~i~~~~~~~~~~~  314 (453)
T cd07099         235 VLADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRH  314 (453)
T ss_pred             ECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCCcCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          394 IRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       394 i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      |++++++|+++++||.....+|+|++|||+.+++++|+.+.+ +||||++|+.+++.+|+|++
T Consensus       315 i~~a~~~ga~~~~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~  377 (453)
T cd07099         315 VDDAVAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIAL  377 (453)
T ss_pred             HHHHHhCCCEEEeCCCcCCCCCeEEecEEEecCCCCCHHHhCCCcCCeeEEEeeCCHHHHHHH
Confidence            999999999999999764346899999999999999977765 99999999999999999975

4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid.

>cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins

Probab=100.00  E-value=1.3e-74  Score=600.47  Aligned_cols=371  Identities=39%  Similarity=0.589  Sum_probs=351.9

Q ss_pred             eeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhh
Q 012806           76 PVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSL  155 (456)
Q Consensus        76 ~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~  155 (456)
                      +++||.||+++++++.++.+|++++++.|++|++  .|++++..+|.++|.++++.|.++.++|++++++|+|||..+++
T Consensus         2 ~~~~P~t~~~~~~~~~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~   79 (453)
T cd07094           2 DVHNPYDGEVIGKVPADDRADAEEALATARAGAE--NRRALPPHERMAILERAADLLKKRAEEFAKIIACEGGKPIKDAR   79 (453)
T ss_pred             CccCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH
Confidence            5789999999999999999999999999999999  99999999999999999999999999999999999999999998


Q ss_pred             hccHHHHHHHHHHHHHhhhHhcCcccCCC-----CCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEec
Q 012806          156 KSEVPMVVRLLHYYAGWADKIHGLTVPGD-----GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKS  230 (456)
Q Consensus       156 ~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKp  230 (456)
                       .|+..+++.+++++....+..+...+.+     .+...+..++|+|||++|+|||||+...++++++||++||+||+||
T Consensus        80 -~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VI~Kp  158 (453)
T cd07094          80 -VEVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKP  158 (453)
T ss_pred             -HHHHHHHHHHHHHHHHHHHhcCccccccccccCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCEEEEEC
Confidence             5999999999999998888766554433     2445678899999999999999999999999999999999999999


Q ss_pred             CCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCC
Q 012806          231 AEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKS  310 (456)
Q Consensus       231 s~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~  310 (456)
                      |+.+|+++..++++++++|+|+|++++++|++.++++.|..|++++.|.||||+.+|+.|.+.+   +++|+++|+|||+
T Consensus       159 s~~~p~~~~~l~~~l~~ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a---~~~~~~lelGGk~  235 (453)
T cd07094         159 ASKTPLSALELAKILVEAGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANA---GGKRIALELGGNA  235 (453)
T ss_pred             CCcchHHHHHHHHHHHHcCCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHc---CCCceEEecCCCC
Confidence            9999999999999999999999999999998888899999999999999999999999999887   5799999999999


Q ss_pred             ceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHH
Q 012806          311 PFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKV  390 (456)
Q Consensus       311 ~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v  390 (456)
                      |+||++|+|++.|++.+++++|.|+||.|+++++||||++++++|+++|+++++++++|+|.++++++||++++.+++++
T Consensus       236 ~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~i~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~  315 (453)
T cd07094         236 PVIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAAERV  315 (453)
T ss_pred             ceEECCCCCHHHHHHHHHHHHHHhcCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          391 LRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       391 ~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      .++|++++++|+++++||..   .|+|++|||+.+++++|+.+.+ +||||++|+.++|.+|+|++
T Consensus       316 ~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~~~~~~~i~~~E~FgPvl~v~~~~~~~eai~~  378 (453)
T cd07094         316 ERWVEEAVEAGARLLCGGER---DGALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRI  378 (453)
T ss_pred             HHHHHHHHHCCCEEEeCccC---CCeEEeCEEEeCCCCCChhhhCCCcCceEEEEEeCCHHHHHHH
Confidence            99999999999999999864   4899999999999999977765 99999999999999999975

ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences.

>cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like

Probab=100.00  E-value=1.8e-74  Score=599.56  Aligned_cols=375  Identities=42%  Similarity=0.680  Sum_probs=355.5

Q ss_pred             eecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhh
Q 012806           77 VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLK  156 (456)
Q Consensus        77 v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~  156 (456)
                      ++||.||+++++++.++.+|++++++.|++|++  .|+.++.++|.++|+++++.|.++.++|++++++|+|||..+++ 
T Consensus         1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-   77 (451)
T cd07103           1 VINPATGEVIGEVPDAGAADADAAIDAAAAAFK--TWRKTTARERAAILRRWADLIRERAEDLARLLTLEQGKPLAEAR-   77 (451)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-
Confidence            479999999999999999999999999999999  99999999999999999999999999999999999999999998 


Q ss_pred             ccHHHHHHHHHHHHHhhhHhcCcccCCC-CCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCch
Q 012806          157 SEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTP  235 (456)
Q Consensus       157 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p  235 (456)
                      .|+..+++.++|++....+..+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus        78 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~  157 (451)
T cd07103          78 GEVDYAASFLEWFAEEARRIYGRTIPSPAPGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETP  157 (451)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceEEEEeeceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCc
Confidence            5999999999999988877766554432 345678899999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEEc
Q 012806          236 LTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIF  315 (456)
Q Consensus       236 ~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~  315 (456)
                      .++..+.++|+++|+|+|+++++++++.+.++.|..|+++|+|.||||+.+|+.+.+.+++ +++|+++|+|||||+||+
T Consensus       158 ~~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~~~~iV~  236 (451)
T cd07103         158 LSALALAELAEEAGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAAD-TVKRVSLELGGNAPFIVF  236 (451)
T ss_pred             HHHHHHHHHHHHcCCCcccEEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCcEEEECCCCCeEEEC
Confidence            9999999999999999999999999777888999999999999999999999999999988 899999999999999999


Q ss_pred             CCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHH
Q 012806          316 DDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIR  395 (456)
Q Consensus       316 ~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~  395 (456)
                      +|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|+
T Consensus       237 ~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~i~  316 (451)
T cd07103         237 DDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVEALVE  316 (451)
T ss_pred             CCCCHHHHHHHHHHHHHHhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcCcCHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          396 SGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       396 ~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      +++.+|+++++||......|+|++|||+.+++++|+.+.+ +||||++|+.|++.+|+|++
T Consensus       317 ~a~~~ga~~l~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~  377 (451)
T cd07103         317 DAVAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIAR  377 (451)
T ss_pred             HHHHCCCEEEeCCCcCCCCCcEECCEEeeCCCCcCHHHhCCCCCceEEEEEECCHHHHHHH
Confidence            9999999999999765447899999999999999977775 99999999999999999875

Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.

>cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like

Probab=100.00  E-value=1.3e-74  Score=600.83  Aligned_cols=374  Identities=43%  Similarity=0.717  Sum_probs=352.0

Q ss_pred             eecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCh-hhhh
Q 012806           77 VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPY-VQSL  155 (456)
Q Consensus        77 v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~-~~a~  155 (456)
                      ++||.||+++++++.++.+|+++++++|++||+  .|+.++.++|.++|+++++.|++++++|++++++|+|||. .+++
T Consensus         1 ~~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~a~   78 (457)
T cd07108           1 VINPATGQVIGEVPRSRAADVDRAVAAAKAAFP--EWAATPARERGKLLARIADALEARSEELARLLALETGNALRTQAR   78 (457)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcHHHHH
Confidence            479999999999999999999999999999999  9999999999999999999999999999999999999997 6877


Q ss_pred             hccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCch
Q 012806          156 KSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTP  235 (456)
Q Consensus       156 ~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p  235 (456)
                       .|+..+++.++++++....+.+...+...+...+..++|+|||++|+|||||+..+++++++||++||+||+|||+.+|
T Consensus        79 -~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p  157 (457)
T cd07108          79 -PEAAVLADLFRYFGGLAGELKGETLPFGPDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAP  157 (457)
T ss_pred             -HHHHHHHHHHHHHHHHHHHhCCceeccCCCeeEEEEeecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCc
Confidence             6999999999999988877666655433444567889999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEEc
Q 012806          236 LTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIF  315 (456)
Q Consensus       236 ~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~  315 (456)
                      .++..+.++++++ +|+|++++++|++.+.+..|..|+++|.|.||||+.+|+.|.+.+++ +++|+++|+|||+|+||+
T Consensus       158 ~~~~~l~~~~~~~-lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~~~aa~-~l~~~~lelgG~~~~iV~  235 (457)
T cd07108         158 LAVLLLAEILAQV-LPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAAD-RLIPVSLELGGKSPMIVF  235 (457)
T ss_pred             HHHHHHHHHHHHh-CCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHhc-cCCeEEEECCCCCeeEEC
Confidence            9999999999996 99999999999877889999999999999999999999999999988 899999999999999999


Q ss_pred             CCCCHHHHHHHHHHH-hhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHH
Q 012806          316 DDADVDQAVELAHFA-LFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYI  394 (456)
Q Consensus       316 ~daD~d~aa~~i~~~-~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i  394 (456)
                      +|||++.|++.++++ +|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|
T Consensus       236 ~dAdl~~Aa~~iv~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i  315 (457)
T cd07108         236 PDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEATDIGAIISEKQFAKVCGYI  315 (457)
T ss_pred             CCCCHHHHHHHHHHhhHhhcCCCCCCCCeEEEEehHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHH
Confidence            999999999999999 5999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHH-cCCeEEeCCcccC----CCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          395 RSGIE-SNATLECGGDRLG----NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       395 ~~a~~-~Ga~v~~gg~~~~----~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      +++++ +|+++++||....    ..|+|++|||+.+++++|+.+.+ +||||++|+.+++.+|+|++
T Consensus       316 ~~a~~~~ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~  382 (457)
T cd07108         316 DLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDEDEVIAM  382 (457)
T ss_pred             HHHHhCCCCEEEeCCCcCccCCCCCceEECCEEEecCCCCChhhhcCCCCceEEeecCCCHHHHHHH
Confidence            99998 9999999997532    46899999999999999977775 99999999999999999975

NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD.

>cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like

Probab=100.00  E-value=1.9e-74  Score=599.00  Aligned_cols=374  Identities=44%  Similarity=0.656  Sum_probs=351.0

Q ss_pred             eecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhh
Q 012806           77 VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLK  156 (456)
Q Consensus        77 v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~  156 (456)
                      ++||.||+++++++.++.+|++++++.|++|++  .|+.++.++|.++|+++++.|.++.++|++++++|+|||..++..
T Consensus         1 ~~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~~~~l~~~~~~l~~~~~~e~Gk~~~~~~~   78 (450)
T cd07092           1 VVDPATGEEIATVPDASAADVDAAVAAAHAAFP--SWRRTTPAERSKALLKLADAIEENAEELAALESRNTGKPLHLVRD   78 (450)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHH
Confidence            469999999999999999999999999999999  999999999999999999999999999999999999999977655


Q ss_pred             ccHHHHHHHHHHHHHhhhHhcCcccCC-CCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCch
Q 012806          157 SEVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTP  235 (456)
Q Consensus       157 ~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p  235 (456)
                      .|+..+++.+++++...+.+.+...+. ..+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus        79 ~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~  158 (450)
T cd07092          79 DELPGAVDNFRFFAGAARTLEGPAAGEYLPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTP  158 (450)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCcccCccCCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccch
Confidence            699999999999998877665443221 1234567889999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEEc
Q 012806          236 LTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIF  315 (456)
Q Consensus       236 ~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~  315 (456)
                      .++..+.++|++ |+|+|++++++|++.+.++.|+.|++++.|+||||+.+|+.|.+.+++ +++|+++|+||+||+||+
T Consensus       159 ~~~~~l~~~~~~-glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~~-~~~~~~lelgG~~p~iV~  236 (450)
T cd07092         159 LTTLLLAELAAE-VLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAAD-TLKRVHLELGGKAPVIVF  236 (450)
T ss_pred             HHHHHHHHHHHh-cCCcccEEEeecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCCcEEEECCCCCeeEEC
Confidence            999999999999 999999999999777788999999999999999999999999999988 899999999999999999


Q ss_pred             CCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHH
Q 012806          316 DDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIR  395 (456)
Q Consensus       316 ~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~  395 (456)
                      +|||+|.|++.+++++|+|+||.|+++++||||++++++|+++|+++++++++|+|.++++++||++++++++++.++|+
T Consensus       237 ~dAdl~~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~i~~~i~  316 (450)
T cd07092         237 DDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFVE  316 (450)
T ss_pred             CCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEEeHHHHHHHHHHHHHHHhhCCcCCCCCCCCccCcccCHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          396 SGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       396 ~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      ++. +|+++++||......|+|++|||+.+++++|+.+.+ +||||++|+.+++.+|||++
T Consensus       317 ~a~-~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~  376 (450)
T cd07092         317 RAP-AHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIEL  376 (450)
T ss_pred             HHH-cCCEEEeCCCCCCCCccEEeeEEEEcCCCCChHHhCCCcCceEEEEEECCHHHHHHH
Confidence            998 999999999765557999999999999999977775 99999999999999999875

NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency.

>cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp

Probab=100.00  E-value=2.2e-74  Score=598.89  Aligned_cols=373  Identities=32%  Similarity=0.493  Sum_probs=352.0

Q ss_pred             ecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhc
Q 012806           78 YDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKS  157 (456)
Q Consensus        78 ~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~  157 (456)
                      +||.||+++++++.++.+|++.+++.|++|++  .|+.++..+|.++|+++++.|+++.++|++++++|+|||..+++ .
T Consensus         1 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~-~   77 (452)
T cd07102           1 ISPIDGSVIAERPLASLEAVRAALERARAAQK--GWRAVPLEERKAIVTRAVELLAANTDEIAEELTWQMGRPIAQAG-G   77 (452)
T ss_pred             CCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHH-H
Confidence            48999999999999999999999999999999  99999999999999999999999999999999999999999987 6


Q ss_pred             cHHHHHHHHHHHHHhhhHhcCcc-cCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchH
Q 012806          158 EVPMVVRLLHYYAGWADKIHGLT-VPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL  236 (456)
Q Consensus       158 ev~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~  236 (456)
                      |+..+++.++|++..+.+..+.. .+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+
T Consensus        78 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~  157 (452)
T cd07102          78 EIRGMLERARYMISIAEEALADIRVPEKDGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPL  157 (452)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCcccCCCCCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcH
Confidence            99999999999999887765543 23334555788999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEEcC
Q 012806          237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFD  316 (456)
Q Consensus       237 ~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~~  316 (456)
                      ++..+.++|+++|+|+|++++++|++ +.+..|+.|++++.|.||||+.+|+.|.+.+++ +++|+++|+|||||+||++
T Consensus       158 ~~~~l~~~l~~aGlP~g~~~~v~g~~-~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~-~~~~v~lelgG~~~~iV~~  235 (452)
T cd07102         158 CGERFAAAFAEAGLPEGVFQVLHLSH-ETSAALIADPRIDHVSFTGSVAGGRAIQRAAAG-RFIKVGLELGGKDPAYVRP  235 (452)
T ss_pred             HHHHHHHHHHhcCCCcCcEEEEeCCc-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cCCcEEEECCCCCceEEcC
Confidence            99999999999999999999999966 788999999999999999999999999998887 8999999999999999999


Q ss_pred             CCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHH
Q 012806          317 DADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRS  396 (456)
Q Consensus       317 daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~  396 (456)
                      |||+|.|++.+++++|+|+||.|++++++|||++++++|+++|+++++++++|+|.++++++||++++.+++++.++|++
T Consensus       236 dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~l~vg~p~~~~~~~gpli~~~~~~~i~~~i~~  315 (452)
T cd07102         236 DADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQIAD  315 (452)
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHcCCeEEeCCccc---CCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          397 GIESNATLECGGDRL---GNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       397 a~~~Ga~v~~gg~~~---~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      ++++|+++++||...   +..|+|++|||+.+++++|+++.+ +||||++|+.|+|.+|+|++
T Consensus       316 a~~~ga~vl~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~  378 (452)
T cd07102         316 AIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAIAL  378 (452)
T ss_pred             HHhCCCEEEeCCCCCCCCCCCCceEcCEEEecCCCCChhhhcCCcCCeEEEEEeCCHHHHHHH
Confidence            999999999999753   246899999999999999977775 99999999999999999975

PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD.

>cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like

Probab=100.00  E-value=2.5e-74  Score=598.15  Aligned_cols=371  Identities=33%  Similarity=0.501  Sum_probs=347.6

Q ss_pred             eeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhh
Q 012806           75 FPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQS  154 (456)
Q Consensus        75 ~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a  154 (456)
                      ++++||.||+++++++.++.+|+++++++|++|++  .|++++..+|.++|+++++.|.+++++|++++++|+|||..++
T Consensus         1 ~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a   78 (452)
T cd07147           1 LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFR--PMRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPIKDA   78 (452)
T ss_pred             CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH
Confidence            35789999999999999999999999999999999  8999999999999999999999999999999999999999999


Q ss_pred             hhccHHHHHHHHHHHHHhhhHhcCcccCCC-----CCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEe
Q 012806          155 LKSEVPMVVRLLHYYAGWADKIHGLTVPGD-----GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLK  229 (456)
Q Consensus       155 ~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlK  229 (456)
                      + .|+..++..+++++..+.+..++..+..     .+...++.++|+|||++|+|||||+...++++++||++||+||+|
T Consensus        79 ~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlK  157 (452)
T cd07147          79 R-GEVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLK  157 (452)
T ss_pred             H-HHHHHHHHHHHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCCCcHHHHHHHHHHHHHHcCCEEEEE
Confidence            8 5999999999999998876654433211     234567889999999999999999999999999999999999999


Q ss_pred             cCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCC
Q 012806          230 SAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGK  309 (456)
Q Consensus       230 ps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~  309 (456)
                      ||+.+|.++..++++|+++|+|+|++++++++ .+.+..|..|+++|+|.||||+.+|+.|.+.++.   +++++|+|||
T Consensus       158 ps~~~p~~~~~l~~~l~~ag~P~g~v~~v~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~v~~~a~~---~~v~lelgG~  233 (452)
T cd07147         158 PASRTPLSALILGEVLAETGLPKGAFSVLPCS-RDDADLLVTDERIKLLSFTGSPAVGWDLKARAGK---KKVVLELGGN  233 (452)
T ss_pred             CCCCCcHHHHHHHHHHHHcCCCcCcEEEEeCC-ccchhHHhcCCCCCEEEEECCHHHHHHHHHHhCc---CceEeecCCC
Confidence            99999999999999999999999999999995 4678899999999999999999999999998754   6999999999


Q ss_pred             CceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHH
Q 012806          310 SPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQK  389 (456)
Q Consensus       310 ~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~  389 (456)
                      ||+||++|||+|.|++.+++++|+|+||.|+++++||||++++|+|+++|+++++++++|||.++++++||++++.++++
T Consensus       234 ~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~  313 (452)
T cd07147         234 AAVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEAER  313 (452)
T ss_pred             CcEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEchhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          390 VLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       390 v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      +.++|++++++|+++++||..   .|+|++|||+.+++++|+.+.+ +||||++|+.+++.+|+|++
T Consensus       314 ~~~~i~~a~~~Ga~~l~gg~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~  377 (452)
T cd07147         314 VEGWVNEAVDAGAKLLTGGKR---DGALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAA  377 (452)
T ss_pred             HHHHHHHHHHCCCEEEecCCc---CCEEEcCEEEeCCCCCChHHhCcCcCCeEEEEEeCCHHHHHHH
Confidence            999999999999999999965   4899999999999999977765 99999999999999999875

Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD.

>cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like

Probab=100.00  E-value=3.8e-74  Score=595.11  Aligned_cols=365  Identities=37%  Similarity=0.590  Sum_probs=344.6

Q ss_pred             CceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhccHHHH
Q 012806           83 AEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMV  162 (456)
Q Consensus        83 ge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~  162 (456)
                      |+++++++.++.+|+++++++|++||+  .|+.++.++|.++|+++++.|++++++|++++++|+|||..++. .|+..+
T Consensus         1 ~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~   77 (443)
T cd07152           1 GAVLGEVGVADAADVDRAAARAAAAQR--AWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRPKAG-FEVGAA   77 (443)
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-HHHHHH
Confidence            689999999999999999999999999  99999999999999999999999999999999999999999987 599999


Q ss_pred             HHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHH-HHH
Q 012806          163 VRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA-LYV  241 (456)
Q Consensus       163 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~-~~l  241 (456)
                      ++.+++++....+..+...+...+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+++|.++ ..+
T Consensus        78 i~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~~l  157 (443)
T cd07152          78 IGELHEAAGLPTQPQGEILPSAPGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVI  157 (443)
T ss_pred             HHHHHHHHHhHHHhCCccccccCCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCcccchhHHHHH
Confidence            9999999987766555444433455678899999999999999999999999999999999999999999999996 789


Q ss_pred             HHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEEcCCCCHH
Q 012806          242 AKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVD  321 (456)
Q Consensus       242 ~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~~daD~d  321 (456)
                      .++|.++|+|+|++++++| +.+.+..|..|++++.|+||||+.+|+.|.+.+++ +++++++|+|||||+||++|||+|
T Consensus       158 ~~~~~~ag~P~gvv~~v~g-~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~-~~~~~~lElGGk~~~iV~~dAdl~  235 (443)
T cd07152         158 ARLFEEAGLPAGVLHVLPG-GADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGR-HLKKVSLELGGKNALIVLDDADLD  235 (443)
T ss_pred             HHHHHHhCcCcCcEEEecC-ChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCcEEEECCCCCeEEECCCCCHH
Confidence            9999999999999999998 56788999999999999999999999999999888 899999999999999999999999


Q ss_pred             HHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcC
Q 012806          322 QAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESN  401 (456)
Q Consensus       322 ~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~G  401 (456)
                      .|++.+++++|.|+||.|++++|||||+++|++|+++|+++++++++|+|.++++++||++++.+++++.++|++++++|
T Consensus       236 ~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~G  315 (443)
T cd07152         236 LAASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDDSVAAG  315 (443)
T ss_pred             HHHHHHHHHHHhhcCCCCcCCeeEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          402 ATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       402 a~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      +++++||..   .|+|++|||+.+++++|+.+.+ +||||++|+.++|.+|+|++
T Consensus       316 a~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~  367 (443)
T cd07152         316 ARLEAGGTY---DGLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVAL  367 (443)
T ss_pred             CEEEeccCc---CCEEEcCEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHH
Confidence            999999964   4899999999999999977775 99999999999999999875

NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids.

>cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like

Probab=100.00  E-value=7.2e-74  Score=593.05  Aligned_cols=368  Identities=36%  Similarity=0.524  Sum_probs=345.2

Q ss_pred             eeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhh
Q 012806           76 PVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSL  155 (456)
Q Consensus        76 ~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~  155 (456)
                      +++||+||+++++++.++.++++.++++|++     .|+.++.++|.++|+++++.|++++++|++++++|+|||..+++
T Consensus         2 ~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~-----~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~   76 (451)
T cd07146           2 EVRNPYTGEVVGTVPAGTEEALREALALAAS-----YRSTLTRYQRSAILNKAAALLEARREEFARLITLESGLCLKDTR   76 (451)
T ss_pred             CccCCCCCCEEEEEcCCCHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH
Confidence            5789999999999999999999999999976     38889999999999999999999999999999999999999997


Q ss_pred             hccHHHHHHHHHHHHHhhhHhcCcccCCC-----CCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEec
Q 012806          156 KSEVPMVVRLLHYYAGWADKIHGLTVPGD-----GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKS  230 (456)
Q Consensus       156 ~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKp  230 (456)
                       .|+..+++.++||+....+..++..+..     .+...+..++|+|||++|+|||||+...++++++||++||+||+||
T Consensus        77 -~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKp  155 (451)
T cd07146          77 -YEVGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKP  155 (451)
T ss_pred             -HHHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEeccceEEEEccCChHHHHHHHHHHHHHHcCCEEEEEC
Confidence             6999999999999988776655443321     2345678899999999999999999999999999999999999999


Q ss_pred             CCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCC
Q 012806          231 AEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKS  310 (456)
Q Consensus       231 s~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~  310 (456)
                      |+.+|+++..+.++|+++|+|+|++++++|++.+++..|+.|++++.|+||||+.+|+.|.+.++   ++++++|+|||+
T Consensus       156 s~~~p~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~~~g~~i~~~a~---~~~~~lElGG~~  232 (451)
T cd07146         156 SEKTPLSAIYLADLLYEAGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATAG---YKRQLLELGGND  232 (451)
T ss_pred             CCCchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhc---CCceeeecCCCc
Confidence            99999999999999999999999999999987888999999999999999999999999998764   589999999999


Q ss_pred             ceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHH
Q 012806          311 PFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKV  390 (456)
Q Consensus       311 ~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v  390 (456)
                      |+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.|+++++||++++.+++++
T Consensus       233 p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v  312 (451)
T cd07146         233 PLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAIQI  312 (451)
T ss_pred             eEEECCCCCHHHHHHHHHHHHHhhCCCCCCCCceEEEchHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          391 LRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       391 ~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      .++|++++++|+++++||..   .|+|++|||+.+++++|+.+.+ +||||++|+.++|.+|+|++
T Consensus       313 ~~~v~~a~~~Ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~  375 (451)
T cd07146         313 ENRVEEAIAQGARVLLGNQR---QGALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAI  375 (451)
T ss_pred             HHHHHHHHhCCCEEEeCCCc---CCEEEcCEEeecCCCCCHHHhCCCCCCeEEEEEeCCHHHHHHH
Confidence            99999999999999999964   4899999999999999977775 99999999999999999875

Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD.

>cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like

Probab=100.00  E-value=1.5e-73  Score=594.20  Aligned_cols=374  Identities=30%  Similarity=0.495  Sum_probs=346.3

Q ss_pred             ecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhc
Q 012806           78 YDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKS  157 (456)
Q Consensus        78 ~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~  157 (456)
                      +||.||+++++++.++.+|++.++++|++|++  .|++++.++|.++|+++++.|.+++++|++++++|+|||+.+++..
T Consensus         1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~   78 (465)
T cd07098           1 YDPATGQHLGSVPADTPEDVDEAIAAARAAQR--EWAKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKTMVDASLG   78 (465)
T ss_pred             CCCCCCCeeEEeeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHH
Confidence            58999999999999999999999999999999  9999999999999999999999999999999999999999998767


Q ss_pred             cHHHHHHHHHHHHHhhhHhcCc-ccCCC---CCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCC
Q 012806          158 EVPMVVRLLHYYAGWADKIHGL-TVPGD---GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQ  233 (456)
Q Consensus       158 ev~~~~~~l~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~  233 (456)
                      |+..+++.++|++....+.... ..+..   .+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.
T Consensus        79 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~  158 (465)
T cd07098          79 EILVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQ  158 (465)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCcccCCccccCCceeEEEEecceeEEEEcccCcHHHHHHHHHHHHHHcCCEEEEECCCc
Confidence            9999999999999877664332 22211   1234578899999999999999999999999999999999999999999


Q ss_pred             chHHHHHHHHHH----HHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCC
Q 012806          234 TPLTALYVAKLF----HEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGK  309 (456)
Q Consensus       234 ~p~~~~~l~~ll----~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~  309 (456)
                      +|+++..+++++    .++|+|+|++++++|++ +.+..|..|++|+.|.||||+.+|+.|.+.+++ +++|+++|+||+
T Consensus       159 ~p~~~~~~~~~~~~~l~~aGlP~gvv~~v~g~~-~~~~~L~~~~~v~~V~ftGs~~~g~~v~~~a~~-~~~~~~lelgG~  236 (465)
T cd07098         159 VAWSSGFFLSIIRECLAACGHDPDLVQLVTCLP-ETAEALTSHPVIDHITFIGSPPVGKKVMAAAAE-SLTPVVLELGGK  236 (465)
T ss_pred             CcHHHHHHHHHHHHHHHhcCCCCCeEEEEECCH-HHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCeEEEECCCC
Confidence            999999866655    68999999999999965 788999999999999999999999999999988 899999999999


Q ss_pred             CceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHH
Q 012806          310 SPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQK  389 (456)
Q Consensus       310 ~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~  389 (456)
                      ||+||++|+|++.|++.+++++|.++||.|++++|||||++++|+|+++|+++++++++|+|+++++++||++++.++++
T Consensus       237 ~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~  316 (465)
T cd07098         237 DPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDR  316 (465)
T ss_pred             CeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCeEEeCCcccC----CCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          390 VLRYIRSGIESNATLECGGDRLG----NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       390 v~~~i~~a~~~Ga~v~~gg~~~~----~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      +.++|++++++|+++++||....    .+|+|++|||+.+++++|+.+.+ +||||++|+.++|.+|+|++
T Consensus       317 ~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~  387 (465)
T cd07098         317 LEELVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEI  387 (465)
T ss_pred             HHHHHHHHHHCCCEEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCHHHhCCCcCCeEEEEEeCCHHHHHHH
Confidence            99999999999999999986532    35899999999999999977765 99999999999999999975

Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation.

>cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like

Probab=100.00  E-value=1.6e-73  Score=592.92  Aligned_cols=376  Identities=45%  Similarity=0.766  Sum_probs=354.6

Q ss_pred             eecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhh
Q 012806           77 VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLK  156 (456)
Q Consensus        77 v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~  156 (456)
                      ++||.||+++++++.++.+|++++++.|++|++  .|+.++.++|.++|+++++.|.+++++|++++++|+||+..+++.
T Consensus         1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~   78 (455)
T cd07093           1 NFNPATGEVLAKVPEGGAAEVDAAVAAAKEAFP--GWSRMSPAERARILHKVADLIEARADELALLESLDTGKPITLART   78 (455)
T ss_pred             CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence            369999999999999999999999999999999  999999999999999999999999999999999999999988865


Q ss_pred             ccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchH
Q 012806          157 SEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL  236 (456)
Q Consensus       157 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~  236 (456)
                      .|+..+++.+++|+....+..+...+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+
T Consensus        79 ~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlkps~~~p~  158 (455)
T cd07093          79 RDIPRAAANFRFFADYILQLDGESYPQDGGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPL  158 (455)
T ss_pred             HHHHHHHHHHHHHHHhHHHhCCccccCCCCceEEEEEEeeeEEEEECCCChHHHHHHHHHHHHHhcCCEEEeECCCcCcH
Confidence            79999999999999887765544444444556788899999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEEcC
Q 012806          237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFD  316 (456)
Q Consensus       237 ~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~~  316 (456)
                      ++..+.++|+++|+|+|++++++|.+.+.+..|+.|+++++|.||||+.+|+.|.+.+++ +++|+++|+||+||+||++
T Consensus       159 ~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~~~~iV~~  237 (455)
T cd07093         159 TAWLLAELANEAGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAP-NLKPVSLELGGKNPNIVFA  237 (455)
T ss_pred             HHHHHHHHHHhcCCCccceEEEecCchHHHHHHhcCCCccEEEEECCHHHHHHHHHHHhh-cccceEeecCCCCceEECC
Confidence            999999999999999999999999778889999999999999999999999999999988 8999999999999999999


Q ss_pred             CCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHH
Q 012806          317 DADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRS  396 (456)
Q Consensus       317 daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~  396 (456)
                      |||++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|.|+++++||++++.+++++.++|++
T Consensus       238 dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~  317 (455)
T cd07093         238 DADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDTEVGPLISKEHLEKVLGYVEL  317 (455)
T ss_pred             CCCHHHHHHHHHHHHHhccCCCcCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHcCCeEEeCCcccC----CCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          397 GIESNATLECGGDRLG----NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       397 a~~~Ga~v~~gg~~~~----~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      ++++|+++++||....    ..|+|++|||+.+++++|+.+.+ +||||++|+.+++.+|+|++
T Consensus       318 a~~~ga~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~  381 (455)
T cd07093         318 ARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEEAIEL  381 (455)
T ss_pred             HHHCCCEEEeCCCccccccCCCCceECCEEEecCCCCChHHhCCCCCceEEEEeeCCHHHHHHH
Confidence            9999999999997542    35899999999999999977775 99999999999999999875

In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone.

>cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like

Probab=100.00  E-value=2.4e-73  Score=586.24  Aligned_cols=353  Identities=35%  Similarity=0.510  Sum_probs=332.0

Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHh
Q 012806           97 IDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKI  176 (456)
Q Consensus        97 v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~  176 (456)
                      ++.++++|++||+  .|+.++.++|.++|.++++.|++++++|++++++|+|||..+++ .|+..+++.++||+..+++.
T Consensus         1 v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~   77 (429)
T cd07100           1 IEAALDRAHAAFL--AWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEAR-AEVEKCAWICRYYAENAEAF   77 (429)
T ss_pred             CHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHh
Confidence            4789999999999  99999999999999999999999999999999999999999998 59999999999999988877


Q ss_pred             cCc-ccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcE
Q 012806          177 HGL-TVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVL  255 (456)
Q Consensus       177 ~~~-~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v  255 (456)
                      .+. ..+.+ +...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+.++|.++|+|+|++
T Consensus        78 ~~~~~~~~~-~~~~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~l~~aglP~gvv  156 (429)
T cd07100          78 LADEPIETD-AGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVF  156 (429)
T ss_pred             cCCeeccCC-CceEEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcCcE
Confidence            543 23322 4457889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcC
Q 012806          256 NVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQ  335 (456)
Q Consensus       256 ~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~  335 (456)
                      ++++|++ +.+..|+.|++++.|.||||+.+|+.|.+.+++ ++||+++|+|||||+||++|||++.|++.+++++|.|+
T Consensus       157 ~~v~g~~-~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~-~~~~~~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~  234 (429)
T cd07100         157 QNLLIDS-DQVEAIIADPRVRGVTLTGSERAGRAVAAEAGK-NLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRLQNA  234 (429)
T ss_pred             EEEeCCc-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCcceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhcc
Confidence            9999955 467889999999999999999999999999988 89999999999999999999999999999999999999


Q ss_pred             CCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCC
Q 012806          336 GQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRG  415 (456)
Q Consensus       336 GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g  415 (456)
                      ||.|++++|||||+++||+|+++|++++.++++|+|+++++++||++++.+++++.++|++++++|+++++||...+..|
T Consensus       235 GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g  314 (429)
T cd07100         235 GQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKRPDGPG  314 (429)
T ss_pred             CCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999997654468


Q ss_pred             ceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          416 YFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       416 ~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      +|++|||+.+++++|+.+.+ +||||++|+.++|.+|+|++
T Consensus       315 ~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~  355 (429)
T cd07100         315 AFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIAL  355 (429)
T ss_pred             eEEcCEEeecCCCCCHHHhCCCCCCeEEEeeeCCHHHHHHH
Confidence            99999999999999977775 99999999999999999875

Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.

>PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=100.00  E-value=1.2e-72  Score=624.19  Aligned_cols=386  Identities=35%  Similarity=0.489  Sum_probs=356.2

Q ss_pred             cCceeCCEEeeCCCCCeeeeecCCCCc-eEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 012806           58 TKNLINGQFVDAASGKTFPVYDPRTAE-VIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM  136 (456)
Q Consensus        58 ~~~~I~G~~~~~~~~~~~~v~~P~tge-~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~  136 (456)
                      .+.+|||      ++.+++++||.|++ ++++++.++.+|++.||+.|++||+  .|+.++..+|.++|+++++.|++++
T Consensus       553 ~~~~i~g------~~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Ai~aA~~A~~--~W~~~~~~~Ra~iL~kaAdll~~~~  624 (1038)
T PRK11904        553 AGPIING------EGEARPVVSPADRRRVVGEVAFADAEQVEQALAAARAAFP--AWSRTPVEERAAILERAADLLEANR  624 (1038)
T ss_pred             ecceEcC------CCCeEEEECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhH
Confidence            3457787      46789999999987 9999999999999999999999999  9999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcc--cCCCCCcceEEEeeccceEEEEccCCchHHHHHh
Q 012806          137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLT--VPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTW  214 (456)
Q Consensus       137 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~  214 (456)
                      ++|+.++++|+||++.++. .|+..++++++||+..+.+..+..  .+...+...+..++|+|||++|+|||||+.++++
T Consensus       625 ~eL~~l~~~E~GK~~~~a~-~EV~eaid~lr~ya~~a~~~~~~~~~l~g~~ge~n~~~~~P~GVv~~IsPwNfPlai~~~  703 (1038)
T PRK11904        625 AELIALCVREAGKTLQDAI-AEVREAVDFCRYYAAQARRLFGAPEKLPGPTGESNELRLHGRGVFVCISPWNFPLAIFLG  703 (1038)
T ss_pred             HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCCcccCCCCCceeEEEEecceEEEEECCCccHHHHHHH
Confidence            9999999999999999997 699999999999999988876543  3333466778999999999999999999999999


Q ss_pred             HHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHH
Q 012806          215 KVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA  294 (456)
Q Consensus       215 ~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~  294 (456)
                      ++++||++||+||+|||+++|+++..++++|+++|+|+|++|+++|++.+++..|+.|++++.|.||||+++|+.|.+.+
T Consensus       704 ~i~aALaaGNtVIlKPse~tpl~a~~l~~ll~eAGlP~gvl~lv~G~g~~vg~~Lv~~p~v~~V~FTGS~~~g~~I~~~~  783 (1038)
T PRK11904        704 QVAAALAAGNTVIAKPAEQTPLIAAEAVKLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTL  783 (1038)
T ss_pred             HHHHHHHcCCEEEeeCCCcCHHHHHHHHHHHHHhCcCcceEEEeeCCchHHHHHHhcCCCcCeEEEECCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999998888999999999999999999999999999888


Q ss_pred             hhC--CCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCC
Q 012806          295 AKS--NLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPF  372 (456)
Q Consensus       295 a~~--~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~  372 (456)
                      +.+  ..+|+++|+|||||+||++|||+|+|++.+++++|.++||.|++.+++|||++++|+|+++|++.++++++|+|.
T Consensus       784 A~~~g~~~pvi~ElGGkNa~IV~~dAdld~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~fl~~L~~~~~~l~vGdp~  863 (1038)
T PRK11904        784 AARDGPIVPLIAETGGQNAMIVDSTALPEQVVDDVVTSAFRSAGQRCSALRVLFVQEDIADRVIEMLKGAMAELKVGDPR  863 (1038)
T ss_pred             hhccCCCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEeHHHHHHHHHHHHHHHHhccCCCcc
Confidence            863  267999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccC--CCCceEecEEEecCCCChHhhhc-cccceEEeEEEc--
Q 012806          373 KSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG--NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILC--  447 (456)
Q Consensus       373 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~--~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~--  447 (456)
                      ++++++||+|++.+++++.++|+++++ |+++++||...+  .+|+|+.|||+..  +++..+.+ +||||++|+.|+  
T Consensus       864 d~~t~~GPvI~~~a~~~l~~~I~~a~~-ga~vl~gg~~~~~~~~G~fv~PTvi~~--~~~~~~~eEiFGPVL~V~~~~~~  940 (1038)
T PRK11904        864 LLSTDVGPVIDAEAKANLDAHIERMKR-EARLLAQLPLPAGTENGHFVAPTAFEI--DSISQLEREVFGPILHVIRYKAS  940 (1038)
T ss_pred             cccCCccCCCCHHHHHHHHHHHHHHHc-CCEEEeCCCCCCCCCCceEEeeEEEcc--CCcHHhCCCCcCcEEEEEEeCCC
Confidence            999999999999999999999999876 899999997643  3599999999963  45655554 999999999998  


Q ss_pred             cccccccc
Q 012806          448 VVTDCTSI  455 (456)
Q Consensus       448 ~~~eai~~  455 (456)
                      +.+|+|++
T Consensus       941 ~ldeaI~~  948 (1038)
T PRK11904        941 DLDKVIDA  948 (1038)
T ss_pred             CHHHHHHH
Confidence            56788764

>cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like

Probab=100.00  E-value=6.7e-73  Score=582.25  Aligned_cols=355  Identities=32%  Similarity=0.434  Sum_probs=332.7

Q ss_pred             HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhH
Q 012806           96 DIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADK  175 (456)
Q Consensus        96 ~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~  175 (456)
                      |++.+|+.|++||+  .|+.++.++|.++|+++++.|+++.++|++++++|+|||..++. .|+..+++.++|++....+
T Consensus         1 ~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~~~~~~~   77 (431)
T cd07095           1 QVDAAVAAARAAFP--GWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQ-TEVAAMAGKIDISIKAYHE   77 (431)
T ss_pred             CHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence            57899999999999  99999999999999999999999999999999999999999997 6999999999999988877


Q ss_pred             hcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcE
Q 012806          176 IHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVL  255 (456)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v  255 (456)
                      ..+.......+...+..++|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++..+.++|.++|+|+|++
T Consensus        78 ~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~~~~~ag~P~g~~  157 (431)
T cd07095          78 RTGERATPMAQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVL  157 (431)
T ss_pred             hcCCcccCCCCceEEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHHHHHHhCcChhHh
Confidence            66544332334567889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcC
Q 012806          256 NVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQ  335 (456)
Q Consensus       256 ~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~  335 (456)
                      ++++| +.+.++.|+.|+++|.|.||||+.+|+.|.+.++..+++++++|+|||||+||++|||+|.|++.+++++|.|+
T Consensus       158 ~~v~g-~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~daDl~~aa~~i~~~~~~~~  236 (431)
T cd07095         158 NLVQG-GRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLTA  236 (431)
T ss_pred             eEEeC-cHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHHhC
Confidence            99998 45678999999999999999999999999998776467999999999999999999999999999999999999


Q ss_pred             CCccccCcccccccc-cHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCC
Q 012806          336 GQCCCAGSRTYVHER-VYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNR  414 (456)
Q Consensus       336 GQ~C~a~~~v~V~~~-v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~  414 (456)
                      ||.|++++|||||++ ++|+|+++|+++++++++|+|+++++++||++++.+++++.+++++++++|+++++||...+++
T Consensus       237 GQ~C~a~~rv~V~~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~~~ga~~l~gg~~~~~~  316 (431)
T cd07095         237 GQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAMERLVAG  316 (431)
T ss_pred             CCCCCCCeEEEEcCcchHHHHHHHHHHHHHhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCEEEeCCCcCCCC
Confidence            999999999999999 9999999999999999999999999999999999999999999999999999999999765557


Q ss_pred             CceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          415 GYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       415 g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      |+|++|||+ +++++|+.+.+ +||||++|+.+++.+|+|++
T Consensus       317 g~~~~Ptv~-~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~  357 (431)
T cd07095         317 TAFLSPGII-DVTDAADVPDEEIFGPLLQVYRYDDFDEAIAL  357 (431)
T ss_pred             CeEEcCEEE-ecCCCChHHhCCCcCCeEEEEeeCCHHHHHHH
Confidence            999999999 69999977765 99999999999999999864

N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.

>cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

Probab=100.00  E-value=2.6e-72  Score=583.81  Aligned_cols=372  Identities=38%  Similarity=0.599  Sum_probs=349.1

Q ss_pred             eeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhh
Q 012806           75 FPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQS  154 (456)
Q Consensus        75 ~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a  154 (456)
                      ++++||.||+++++++.++.++++.++++|++|++  .|+.++.++|.++|.++++.|.++.++|++++++|+|||..++
T Consensus         1 ~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a   78 (453)
T cd07149           1 IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAK--EMKSLPAYERAEILERAAQLLEERREEFARTIALEAGKPIKDA   78 (453)
T ss_pred             CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHH
Confidence            46789999999999999999999999999999999  9999999999999999999999999999999999999999999


Q ss_pred             hhccHHHHHHHHHHHHHhhhHhcCcccCCC-----CCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEe
Q 012806          155 LKSEVPMVVRLLHYYAGWADKIHGLTVPGD-----GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLK  229 (456)
Q Consensus       155 ~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlK  229 (456)
                      . .|+..+++.++|++..+.+..++..+.+     .+...+..++|+|||++|+|||||+..+++++++||++||+||+|
T Consensus        79 ~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VI~K  157 (453)
T cd07149          79 R-KEVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLK  157 (453)
T ss_pred             H-HHHHHHHHHHHHHHHHHHHhcCccccccccCCCCCeeEEEEeecceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEE
Confidence            8 5999999999999988776655443321     133457889999999999999999999999999999999999999


Q ss_pred             cCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCC
Q 012806          230 SAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGK  309 (456)
Q Consensus       230 ps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~  309 (456)
                      ||+.+|.++..+.++|+++|+|+|++++++|++.++++.|..|+++|+|.||||+.+|+.|.+.+   .++++++|+|||
T Consensus       158 ps~~~p~~~~~l~~~l~~ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a---~~~~~~lelGGk  234 (453)
T cd07149         158 PASQTPLSALKLAELLLEAGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKA---GLKKVTLELGSN  234 (453)
T ss_pred             CCCcchHHHHHHHHHHHHcCcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHc---CCCceeeecCCC
Confidence            99999999999999999999999999999997777799999999999999999999999998876   368999999999


Q ss_pred             CceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHH
Q 012806          310 SPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQK  389 (456)
Q Consensus       310 ~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~  389 (456)
                      +|+||++|+|++.+++.+++++|.++||.|++++++|||++++|+|+++|+++++++++|+|.++++++||++++.++++
T Consensus       235 ~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~  314 (453)
T cd07149         235 AAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPLDEDTDVGPMISEAEAER  314 (453)
T ss_pred             ceEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCceEEEcHhHHHHHHHHHHHHHHhCCcCCCCCCCCccccccCHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          390 VLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       390 v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      +.++|++++.+|+++++||..   .|+|++|||+.+++++|+.+.+ +||||++|+.++|.+|+|++
T Consensus       315 ~~~~i~~a~~~ga~v~~gg~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~  378 (453)
T cd07149         315 IEEWVEEAVEGGARLLTGGKR---DGAILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAM  378 (453)
T ss_pred             HHHHHHHHHHCCCEEEeCCCC---CCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHH
Confidence            999999999999999999864   4899999999999999976765 99999999999999999875

Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.

>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=100.00  E-value=5.6e-72  Score=623.77  Aligned_cols=377  Identities=30%  Similarity=0.470  Sum_probs=348.5

Q ss_pred             CceeCCEEeeCCCCCeeeeecCCC-CceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 012806           59 KNLINGQFVDAASGKTFPVYDPRT-AEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME  137 (456)
Q Consensus        59 ~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~  137 (456)
                      .-+|+|+   ..++.+++++||.| ++++++++.++.+|++.|+++|++||+  .|+.++..+|.++|+++++.|+++++
T Consensus       648 ~p~~~~~---~~~~~~~~v~nPa~~~~~vg~v~~a~~~dv~~Av~aA~~A~~--~W~~~p~~eRa~iL~r~Adlle~~~~  722 (1318)
T PRK11809        648 APMLEDP---VAAGEMSPVINPADPRDIVGYVREATPAEVEQALESAVNAAP--IWFATPPAERAAILERAADLMEAQMQ  722 (1318)
T ss_pred             CCcccCc---CCCCCEEEeECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHH
Confidence            3466774   33567899999998 899999999999999999999999999  99999999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHH
Q 012806          138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVA  217 (456)
Q Consensus       138 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~  217 (456)
                      +|+.++++|+|||+.++. .|+..++++++||+..+.+..           ....++|+|||++|+|||||+.+++++++
T Consensus       723 eL~~l~~~EaGKt~~~A~-~EV~eaidflryyA~~a~~~~-----------~~~~~~PlGVV~~IsPWNFPlai~~g~ia  790 (1318)
T PRK11809        723 TLMGLLVREAGKTFSNAI-AEVREAVDFLRYYAGQVRDDF-----------DNDTHRPLGPVVCISPWNFPLAIFTGQVA  790 (1318)
T ss_pred             HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc-----------CCceeecccEEEEECCCccHHHHHHHHHH
Confidence            999999999999999987 699999999999998775421           12458999999999999999999999999


Q ss_pred             HHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhC
Q 012806          218 PALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKS  297 (456)
Q Consensus       218 ~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~  297 (456)
                      +||++||+||+|||+++|+++..++++|+++|+|+|++|+++|++.+++..|..|++|+.|.||||+++|+.|.+.+++ 
T Consensus       791 aALaAGN~VV~KPseqTpl~a~~lv~ll~eAGlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt~tg~~I~~~aA~-  869 (1318)
T PRK11809        791 AALAAGNSVLAKPAEQTPLIAAQAVRILLEAGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLAG-  869 (1318)
T ss_pred             HHHHcCCeEEEeCCCCcHHHHHHHHHHHHHhCcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCHHHHHHHHHHHhh-
Confidence            9999999999999999999999999999999999999999999888899999999999999999999999999999887 


Q ss_pred             CC------ccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCC
Q 012806          298 NL------KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDP  371 (456)
Q Consensus       298 ~~------~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p  371 (456)
                      ++      +|+++|+||+|++||++|||+|++++.+++++|.++||.|++.+++|||++++|+|+++|++.++++++|||
T Consensus       870 ~l~~~g~~~pliaElGGkNa~IVdsdAdle~Av~~iv~sAF~~aGQrCsA~~rl~V~e~Iad~fl~~L~~a~~~l~vGdP  949 (1318)
T PRK11809        870 RLDPQGRPIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDDVADRTLKMLRGAMAECRMGNP  949 (1318)
T ss_pred             hcccccCceeEEEecCCccceEECCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEcHHHHHHHHHHHHHHHHhcCCCCc
Confidence            44      799999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccC---CCCceEecEEEecCCCChHhhhc-cccceEEeEEEc
Q 012806          372 FKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG---NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILC  447 (456)
Q Consensus       372 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~---~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~  447 (456)
                      .+.++++||+|++++++++.++|++++++|++++.||....   +.|+|++|||+..  +++..+.+ +||||++|++|+
T Consensus       950 ~~~~tdvGPvId~~a~~~i~~~I~~a~~~G~~v~~g~~~~~~~~~~G~fv~PTIi~~--~~~~~l~eEiFGPVL~V~~~~ 1027 (1318)
T PRK11809        950 DRLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQSGTFVPPTLIEL--DSFDELKREVFGPVLHVVRYN 1027 (1318)
T ss_pred             ccccCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCCCCCCCCeEEeeEEEec--cchhhhcCcccCceEEEEEeC
Confidence            99999999999999999999999999999999998875422   4699999999974  45655554 999999999997


Q ss_pred             --cccccccc
Q 012806          448 --VVTDCTSI  455 (456)
Q Consensus       448 --~~~eai~~  455 (456)
                        +.+|+|++
T Consensus      1028 ~~~ldeaI~~ 1037 (1318)
T PRK11809       1028 RNQLDELIEQ 1037 (1318)
T ss_pred             CCCHHHHHHH
Confidence              67888764

>cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins

Probab=100.00  E-value=4.1e-71  Score=569.02  Aligned_cols=353  Identities=29%  Similarity=0.379  Sum_probs=327.1

Q ss_pred             CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHH
Q 012806           92 GDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAG  171 (456)
Q Consensus        92 ~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~  171 (456)
                      ++.+|+++++++|++||+  .|+.++..+|.++|+++++.|++++++|++++++|+|||+.++...|+..+++.++||+.
T Consensus         2 ~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~   79 (436)
T cd07135           2 TPLDEIDSIHSRLRATFR--SGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVSGVKNDILHMLK   79 (436)
T ss_pred             CCHHHHHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHH
Confidence            578999999999999999  899999999999999999999999999999999999999998864699999999999999


Q ss_pred             hhhHhcCcccCCC-----CCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHH
Q 012806          172 WADKIHGLTVPGD-----GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFH  246 (456)
Q Consensus       172 ~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~  246 (456)
                      ...++........     .+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.++++
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~l~~  159 (436)
T cd07135          80 NLKKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVP  159 (436)
T ss_pred             HHHHhhCCcccCCcccccCCCceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHH
Confidence            8876543322211     13456889999999999999999999999999999999999999999999999999999999


Q ss_pred             HcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEEcCCCCHHHHHHH
Q 012806          247 EAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVEL  326 (456)
Q Consensus       247 ~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~  326 (456)
                      + |+|+|++++++|++.+.+ .|+.|+ +|.|.||||+.+|+.|.+.++. +++|+++|+||+||+||++|||+|.|++.
T Consensus       160 ~-~lP~g~v~vv~g~~~~~~-~l~~~~-vd~v~ftGs~~~g~~i~~~aa~-~~~~~~lelgG~~~~iV~~dADl~~aa~~  235 (436)
T cd07135         160 K-YLDPDAFQVVQGGVPETT-ALLEQK-FDKIFYTGSGRVGRIIAEAAAK-HLTPVTLELGGKSPVIVTKNADLELAAKR  235 (436)
T ss_pred             H-hCCcCEEEEEcCCchhHH-HHHhCC-CCEEEEECCcHHHHHHHHHHHh-cCCCeEEEccCCCcEEECCCCCHHHHHHH
Confidence            9 699999999999766655 588889 9999999999999999998887 89999999999999999999999999999


Q ss_pred             HHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEe
Q 012806          327 AHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLEC  406 (456)
Q Consensus       327 i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~  406 (456)
                      +++++|.++||.|++++|||||++++|+|+++|+++++++++|+| ++++++||++++++++++.++++++   |+++++
T Consensus       236 i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~i~~~v~~a---g~~v~~  311 (436)
T cd07135         236 ILWGKFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPGGA-NASPDYTRIVNPRHFNRLKSLLDTT---KGKVVI  311 (436)
T ss_pred             HHHHHhccCCceecCCCEEeccHHHHHHHHHHHHHHHHHhcCCCC-CCCCCcCCCCCHHHHHHHHHHHHhc---CCeEEE
Confidence            999999999999999999999999999999999999999999999 8999999999999999999999987   889999


Q ss_pred             CCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          407 GGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       407 gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      ||... +.|+|++|||+.+++++|+.+.+ +||||++|+.++|.+|+|++
T Consensus       312 gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~  360 (436)
T cd07135         312 GGEMD-EATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKV  360 (436)
T ss_pred             CCCcC-CCCCEEccEEEecCCCccHHHhccccCCceEEEecCCHHHHHHH
Confidence            99764 36899999999999999977765 99999999999999999875

Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD.

>PLN02203 aldehyde dehydrogenase

Probab=100.00  E-value=1.5e-70  Score=568.68  Aligned_cols=356  Identities=25%  Similarity=0.363  Sum_probs=329.3

Q ss_pred             cCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHH
Q 012806           91 EGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYA  170 (456)
Q Consensus        91 ~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~  170 (456)
                      ++..+|+++++++|++||+  .|+.++..+|.++|+++++.|++++++|++++++|+|||..++...|+..+++.++|++
T Consensus         2 ~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~~   79 (484)
T PLN02203          2 EAPGETLEGSVAELRETYE--SGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDEVGVLTKSANLAL   79 (484)
T ss_pred             CCCHHHHHHHHHHHHHHHH--hcCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence            4678999999999999999  89999999999999999999999999999999999999999986569999999999999


Q ss_pred             HhhhHhcCcc---cCC-CCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHH
Q 012806          171 GWADKIHGLT---VPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFH  246 (456)
Q Consensus       171 ~~~~~~~~~~---~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~  246 (456)
                      +...+..+..   .+. ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+.++++
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~  159 (484)
T PLN02203         80 SNLKKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAANIP  159 (484)
T ss_pred             HHHHHHhccccccCCcccCCceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHH
Confidence            8877765431   221 123467889999999999999999999999999999999999999999999999999999999


Q ss_pred             HcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEEcC---CCCHHHH
Q 012806          247 EAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFD---DADVDQA  323 (456)
Q Consensus       247 ~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~~---daD~d~a  323 (456)
                      ++ +|+|++|+++| +.++++.|..| .+|.|+||||+.+|+.|.+.+++ +++|+++|+|||||+||++   |+|+|.|
T Consensus       160 ~~-lP~gvv~vv~g-~~~~~~~l~~~-~vd~v~fTGS~~~G~~v~~~aa~-~l~~v~lElGGknp~iV~~d~~daDl~~a  235 (484)
T PLN02203        160 KY-LDSKAVKVIEG-GPAVGEQLLQH-KWDKIFFTGSPRVGRIIMTAAAK-HLTPVALELGGKCPCIVDSLSSSRDTKVA  235 (484)
T ss_pred             Hh-CCcCEEEEEeC-CHHHHHHHHhC-CCCEEEEECCHHHHHHHHHHHHh-cCCCEEEEecCCCeEEEccCCCCCCHHHH
Confidence            96 99999999999 77889999998 59999999999999999999988 8999999999999999997   6999999


Q ss_pred             HHHHHHHhhh-cCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCC
Q 012806          324 VELAHFALFY-NQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNA  402 (456)
Q Consensus       324 a~~i~~~~~~-~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga  402 (456)
                      ++.+++++|. |+||.|++++|+|||++++|+|+++|++++.++++|||.++ +++||++++++++++.++|++++.+ +
T Consensus       236 a~~i~~~~f~~~aGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~p~~~-~~~Gpli~~~~~~~v~~~i~~a~~~-~  313 (484)
T PLN02203        236 VNRIVGGKWGSCAGQACIAIDYVLVEERFAPILIELLKSTIKKFFGENPRES-KSMARILNKKHFQRLSNLLKDPRVA-A  313 (484)
T ss_pred             HHHHHHHhcccCCCCccccCCeEEEcHHHHHHHHHHHHHHHHHhcCCCCCcC-CCcCCCCCHHHHHHHHHHHHHHHhC-C
Confidence            9999999996 89999999999999999999999999999999999999986 6899999999999999999999886 7


Q ss_pred             eEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          403 TLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       403 ~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      ++++||.. +++|+|++|||+.+++++|+++.+ +||||++|+.|+|.+|+|++
T Consensus       314 ~~~~gg~~-~~~g~~i~PTvl~~v~~d~~i~~eE~FGPVl~v~~~~~~~eai~~  366 (484)
T PLN02203        314 SIVHGGSI-DEKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAF  366 (484)
T ss_pred             eEEeCCCc-CCCCCEEeeEEEecCCCCCHHHhcCccCCeEEEEeeCCHHHHHHH
Confidence            89999875 346999999999999999977765 99999999999999999975

>TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN

Probab=100.00  E-value=1.6e-70  Score=571.94  Aligned_cols=366  Identities=18%  Similarity=0.223  Sum_probs=323.9

Q ss_pred             eeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhh
Q 012806           76 PVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSL  155 (456)
Q Consensus        76 ~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~  155 (456)
                      .-+||+||+++++++.++.   ++++++|++||+  .|++++..+|.++|+++++.|+++.++|++++++|+|||+.+++
T Consensus        68 ~e~~P~t~~~~~~~~~~~~---~~av~aA~~A~~--~W~~~~~~~R~~vL~~~a~~l~~~~~elA~~~~~etGk~~~~a~  142 (551)
T TIGR02288        68 GERSPYGVELGVTYPQCDG---DALLDAAHAALP--GWRDAGARARAGVCLEILQRLNARSFEIAHAVMHTTGQAFMMAF  142 (551)
T ss_pred             cccCCCCCCEEEEEcCCCH---HHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHH
Confidence            3459999999999999985   899999999999  89999999999999999999999999999999999999998874


Q ss_pred             h-c---cHHHHHHHHHHHHHhhhHhcCccc---CCC-CC---cceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCC
Q 012806          156 K-S---EVPMVVRLLHYYAGWADKIHGLTV---PGD-GN---YHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGN  224 (456)
Q Consensus       156 ~-~---ev~~~~~~l~~~~~~~~~~~~~~~---~~~-~~---~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN  224 (456)
                      . +   ++.+.++.++|+++...++.+...   +.. .+   ...+..++|+|||++|+|||||+++.++++++||++||
T Consensus       143 e~gkp~~~~r~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vI~PwNfP~~~~~~~l~~ALaaGN  222 (551)
T TIGR02288       143 QAGGPHAQDRGLEAVAYAYREMSRIPETAVWEKPQGKNDPLKLKKRFTIVPRGIALVIGCSTFPTWNTYPGLFASLATGN  222 (551)
T ss_pred             hccChHHHHHHHHHHHHHHHHHHhccCcccccccCCCCCcccccceEEEEecCeEEEEcCcccHHHHHHHHHHHHHHcCC
Confidence            2 1   778889999999998877766543   211 11   12234789999999999999999999999999999999


Q ss_pred             EEEEecCCCchHHHH----HHHHHHHHcCCCCCcEEEEeCC-chhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCC
Q 012806          225 TIVLKSAEQTPLTAL----YVAKLFHEAGLPPGVLNVVSGY-GPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL  299 (456)
Q Consensus       225 ~vvlKps~~~p~~~~----~l~~ll~~aGlP~g~v~vv~g~-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~  299 (456)
                      +||+|||+.+|+++.    .+.++|.++|+|+|+||+++|. +.++++.|+.|++|++|.||||+++|+.|.+.++.   
T Consensus       223 ~VVlKPs~~tpl~~~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~~~~~~L~~~p~v~~I~FTGSt~~G~~I~~~aa~---  299 (551)
T TIGR02288       223 PVLVKPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNARQ---  299 (551)
T ss_pred             eEEEECCcccchhHHHHHHHHHHHHHHcCcChhHEEEecCCCcHHHHHHHHhCCCccEEEEECCHHHHHHHHHhccc---
Confidence            999999999998655    5679999999999999999985 67889999999999999999999999999988753   


Q ss_pred             ccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccc---------cHHHHHHHHHHHHhhhhcCC
Q 012806          300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHER---------VYDEFVEKAKARAMRRIVGD  370 (456)
Q Consensus       300 ~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~---------v~~~f~~~l~~~~~~~~~g~  370 (456)
                      +++++|+|||||+||++|+|+|.+++.+++++|.|+||.|++++|||||++         +||+|+++|+++++++ +||
T Consensus       300 ~~v~lElGGknp~IV~~dADld~aa~~i~~~~f~~sGQ~Cta~~ri~V~~~~i~~~~g~~i~def~~~L~~~~~~l-vGd  378 (551)
T TIGR02288       300 AQVYTEKAGVNTVIIESTDDYKAMLRNLAFSLSLYSGQMCTTTQAILVPRDGIRTDQGRKSYDEVAADLATAIDGL-LGD  378 (551)
T ss_pred             CcEEeecCCcCeEEEcCCCCHHHHHHHHHHHHHhhCCCCCCCCCEEEEeccccccccchhHHHHHHHHHHHHHHHh-cCC
Confidence            799999999999999999999999999999999999999999999999999         7999999999999999 999


Q ss_pred             CCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccC---CCC-ceEecEEEecCCCChHhhhc-cccceEEeEE
Q 012806          371 PFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG---NRG-YFVQPTVFSDVTVSFISLLQ-FLIPIFSFII  445 (456)
Q Consensus       371 p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~---~~g-~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~  445 (456)
                      |.++.+++||++++++++++    ++++++| ++++||....   ..| +|++|||+....++|+++.+ +||||++|+.
T Consensus       379 p~~~~~~~Gplis~~~~~ri----~~a~~~G-~v~~gG~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~  453 (551)
T TIGR02288       379 PARATAVLGAIQSPDTLARI----AEARALG-EVLLASTKIEHPEFPGARVRTPLLLKCDAADEAAYMQERFGPIAFVVA  453 (551)
T ss_pred             cccccccccCcCCHHHHHHH----HHHHhCC-CEEEcCccCCCCCCCCCEEeccEEEEcCCCCCHHHhCCCcCCEEEEEE
Confidence            99999999999999999995    5667788 6666665421   135 68999999533348877775 9999999999


Q ss_pred             Eccccccccc
Q 012806          446 LCVVTDCTSI  455 (456)
Q Consensus       446 ~~~~~eai~~  455 (456)
                      ++|.+|+|++
T Consensus       454 ~~d~deAi~~  463 (551)
T TIGR02288       454 VDDGAHAVEL  463 (551)
T ss_pred             ECCHHHHHHH
Confidence            9999999875

This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278.

>cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins

Probab=100.00  E-value=2.5e-70  Score=565.50  Aligned_cols=353  Identities=41%  Similarity=0.628  Sum_probs=332.7

Q ss_pred             HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhH
Q 012806           96 DIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADK  175 (456)
Q Consensus        96 ~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~  175 (456)
                      |++++++.|++|++  .|+.++..+|.++|+++++.|.+++++|++++++|+||+..++. .|+..+++.+++++....+
T Consensus         1 ~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~-~ei~~~~~~l~~~~~~~~~   77 (431)
T cd07104           1 DVDRAYAAAAAAQK--AWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAA-FEVGAAIAILREAAGLPRR   77 (431)
T ss_pred             CHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence            57899999999999  99999999999999999999999999999999999999999987 5999999999999998876


Q ss_pred             hcCcccCCC-CCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHH-HHHHHHHHHHcCCCCC
Q 012806          176 IHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLT-ALYVAKLFHEAGLPPG  253 (456)
Q Consensus       176 ~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~-~~~l~~ll~~aGlP~g  253 (456)
                      ..+...+.. .+...+.+++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.+ +..+.+++.++|+|+|
T Consensus        78 ~~~~~~~~~~~g~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~aGlP~g  157 (431)
T cd07104          78 PEGEILPSDVPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKG  157 (431)
T ss_pred             hcCccccCCCCCceeEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHHHHHHHHHHcCCCcc
Confidence            655544432 34567889999999999999999999999999999999999999999999998 5789999999999999


Q ss_pred             cEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhh
Q 012806          254 VLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFY  333 (456)
Q Consensus       254 ~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~  333 (456)
                      +++++++++.+.+..|..|++++.|.||||+.+|+.|.+.+++ +++++++|+||++|+||++|+|++.|++.+++++|.
T Consensus       158 vv~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~  236 (431)
T cd07104         158 VLNVVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGR-HLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFL  236 (431)
T ss_pred             cEEEeeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhh-cCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHh
Confidence            9999999888889999999999999999999999999999988 899999999999999999999999999999999999


Q ss_pred             cCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCC
Q 012806          334 NQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGN  413 (456)
Q Consensus       334 ~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~  413 (456)
                      |+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.+++++++.+|+++++||..   
T Consensus       237 ~~GQ~C~a~~~v~v~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~G~~~~~gg~~---  313 (431)
T cd07104         237 HQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGTY---  313 (431)
T ss_pred             cCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCC---
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999864   


Q ss_pred             CCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          414 RGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       414 ~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      .|+|++|||+.+++++|+.+.+ +||||++|+.++|.+|+|++
T Consensus       314 ~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~  356 (431)
T cd07104         314 EGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVEL  356 (431)
T ss_pred             CCceECCEEeecCCCCChhhhCcCcCCeEEEEEECCHHHHHHH
Confidence            5899999999999999977665 99999999999999999875

ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences.

>cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like

Probab=100.00  E-value=3.2e-70  Score=563.78  Aligned_cols=351  Identities=38%  Similarity=0.556  Sum_probs=326.8

Q ss_pred             HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhH
Q 012806           96 DIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADK  175 (456)
Q Consensus        96 ~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~  175 (456)
                      |+++++++|++||+  .|+.++.++|.++|+++++.|+++.++|++++++|+|||..++. .|+..+++.++|+++..++
T Consensus         1 ~v~~ai~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~-~ei~~~~~~l~~~~~~~~~   77 (432)
T cd07105           1 DADQAVEAAAAAFP--AWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAG-FNVDLAAGMLREAASLITQ   77 (432)
T ss_pred             CHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence            57899999999999  99999999999999999999999999999999999999988876 5999999999999998876


Q ss_pred             hcCcccCCC-CCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCc
Q 012806          176 IHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGV  254 (456)
Q Consensus       176 ~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~  254 (456)
                      ..+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+|+|+
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~aGlP~gv  157 (432)
T cd07105          78 IIGGSIPSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGV  157 (432)
T ss_pred             hcCeecccCCCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHHHHHHcCcCCCc
Confidence            544443322 3445688899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEeCC---chhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHh
Q 012806          255 LNVVSGY---GPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFAL  331 (456)
Q Consensus       255 v~vv~g~---~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~  331 (456)
                      +|+++|+   +.+++..|+.|++++.|+||||+.+|+.|.+.+++ +++|+++|+|||+|+||++|+|+|.|++.+++++
T Consensus       158 ~~~v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~aa~-~~~~~~lElgGk~p~iV~~dadl~~aa~~i~~~~  236 (432)
T cd07105         158 LNVVTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAK-HLKPVLLELGGKAPAIVLEDADLDAAANAALFGA  236 (432)
T ss_pred             EEEEeCCCCchHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCeEEEeCCCCCceEECCCCCHHHHHHHHHHHH
Confidence            9999985   34578999999999999999999999999999988 8999999999999999999999999999999999


Q ss_pred             hhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCccc
Q 012806          332 FYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRL  411 (456)
Q Consensus       332 ~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~  411 (456)
                      |.|+||.|++++++|||+++||+|+++|+++++++++|     ++++||++++.+++++.++|++++++|+++++||...
T Consensus       237 ~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g-----~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~  311 (432)
T cd07105         237 FLNSGQICMSTERIIVHESIADEFVEKLKAAAEKLFAG-----PVVLGSLVSAAAADRVKELVDDALSKGAKLVVGGLAD  311 (432)
T ss_pred             HhcCCCCCcCCceEEEcHHHHHHHHHHHHHHHHhhcCC-----CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcC
Confidence            99999999999999999999999999999999999988     5789999999999999999999999999999999764


Q ss_pred             C-CCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          412 G-NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       412 ~-~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      . ..|+|++|||+.+++++|+.+.+ +||||++|+.++|.+|+|++
T Consensus       312 ~~~~~~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~  357 (432)
T cd07105         312 ESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRI  357 (432)
T ss_pred             CCCCCeEEeeEEEecCCCCCHHHhCCCcCCeEEEEeeCCHHHHHHH
Confidence            3 46899999999999999977775 99999999999999999875

Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD.

>PRK10090 aldehyde dehydrogenase A; Provisional

Probab=100.00  E-value=1.9e-70  Score=558.74  Aligned_cols=329  Identities=33%  Similarity=0.566  Sum_probs=310.0

Q ss_pred             HHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCC-CCcceEEEeeccceEEEEc
Q 012806          125 MLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIV  203 (456)
Q Consensus       125 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~  203 (456)
                      |+++++.|++++++|++++++|+|||+.+++ .|+..+++.++||+.++.+..+...+.. .+...+..++|+|||++|+
T Consensus         1 L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~   79 (409)
T PRK10090          1 LRKIAAGIRERASEISALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGIL   79 (409)
T ss_pred             CHHHHHHHHHCHHHHHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccCCCCCCceeEEEEecccEEEEEC
Confidence            5789999999999999999999999999998 6999999999999999887766543322 2345788899999999999


Q ss_pred             cCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecC
Q 012806          204 PWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGH  283 (456)
Q Consensus       204 p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs  283 (456)
                      |||||+..+++++++||++||+||+|||+.+|.++..+++++.++|+|+|++++|+|++.+.+..|..|+++++|+||||
T Consensus        80 p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~~~v~~V~ftGs  159 (409)
T PRK10090         80 PWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGS  159 (409)
T ss_pred             CCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHcCCCcccEEEEeCCChhHHHHHhcCCCcCEEEEECC
Confidence            99999999999999999999999999999999999999999999999999999999988888999999999999999999


Q ss_pred             hhHHHHHHHHHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHH
Q 012806          284 CDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARA  363 (456)
Q Consensus       284 ~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~  363 (456)
                      +.+|+.|.+.+++ ++|++++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++++|+++|++++
T Consensus       160 ~~~g~~v~~~aa~-~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~  238 (409)
T PRK10090        160 VSAGEKIMAAAAK-NITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAM  238 (409)
T ss_pred             HHHHHHHHHHHHh-cCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEcHHHHHHHHHHHHHHH
Confidence            9999999999888 899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhcCCCCCC-CCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceE
Q 012806          364 MRRIVGDPFKS-GVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIF  441 (456)
Q Consensus       364 ~~~~~g~p~~~-~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~  441 (456)
                      +++++|||+++ ++++||++++.+++++.++|++++++|+++++||.+..+.|+|++|||+.+++++|+.+.+ +||||+
T Consensus       239 ~~~~~G~p~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl  318 (409)
T PRK10090        239 QAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVL  318 (409)
T ss_pred             HhcCCCCCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEecEEEeCCCCCCHHHhCCCCCceE
Confidence            99999999998 9999999999999999999999999999999999875556899999999999999977775 999999


Q ss_pred             EeEEEccccccccc
Q 012806          442 SFIILCVVTDCTSI  455 (456)
Q Consensus       442 ~vv~~~~~~eai~~  455 (456)
                      +|+.|+|.+|+|++
T Consensus       319 ~v~~~~~~~eai~~  332 (409)
T PRK10090        319 PVVAFDTLEEAIAM  332 (409)
T ss_pred             EEEEECCHHHHHHH
Confidence            99999999999875

>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=100.00  E-value=3.2e-70  Score=611.14  Aligned_cols=378  Identities=33%  Similarity=0.497  Sum_probs=348.5

Q ss_pred             CceeCCEEeeCCCCCeeeeecCCC-CceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 012806           59 KNLINGQFVDAASGKTFPVYDPRT-AEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME  137 (456)
Q Consensus        59 ~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~  137 (456)
                      +.+|+|+..   .+.+++++||.| ++++++++.++.+++++||+.|++||+  .|+.++.++|.++|+++++.|+++++
T Consensus       556 ~~~i~g~~~---~~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Av~aA~~A~~--~W~~~~~~~Ra~iL~raAdll~~~~~  630 (1208)
T PRK11905        556 APLLAGGDV---DGGTRPVLNPADHDDVVGTVTEASAEDVERALAAAQAAFP--EWSATPAAERAAILERAADLMEAHMP  630 (1208)
T ss_pred             cceeccccc---cCCeeeEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHhHH
Confidence            446677654   356789999999 999999999999999999999999999  99999999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHH
Q 012806          138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVA  217 (456)
Q Consensus       138 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~  217 (456)
                      +|+.++++|+||++.++. .|+..++++++||+..+.+..+           ...++|+|||++|+|||||+.+++++++
T Consensus       631 eL~~l~~~E~GKt~~ea~-~Ev~eaid~lr~ya~~a~~~~~-----------~~~~~P~GVv~~IsPwNfPlai~~g~i~  698 (1208)
T PRK11905        631 ELFALAVREAGKTLANAI-AEVREAVDFLRYYAAQARRLLN-----------GPGHKPLGPVVCISPWNFPLAIFTGQIA  698 (1208)
T ss_pred             HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcC-----------CceecCccEEEEEcCCcCHHHHHHHHHH
Confidence            999999999999999997 6999999999999998765432           1357899999999999999999999999


Q ss_pred             HHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhC
Q 012806          218 PALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKS  297 (456)
Q Consensus       218 ~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~  297 (456)
                      +||++||+||+|||+++|+++..++++|+++|+|+|++|+|+|++.+++..|..|++|+.|.||||+++|+.|.+.++++
T Consensus       699 aALaaGN~VV~KPse~tpl~a~~l~~ll~eAGlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt~vg~~I~~~~A~~  778 (1208)
T PRK11905        699 AALVAGNTVLAKPAEQTPLIAARAVRLLHEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKR  778 (1208)
T ss_pred             HHHHcCCEEEEeCCcccHHHHHHHHHHHHHcCCCcccEEEeeCCchHHHHHHHcCCCcCEEEEeCCHHHHHHHHHHHHhh
Confidence            99999999999999999999999999999999999999999998888999999999999999999999999999998872


Q ss_pred             --CCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCC
Q 012806          298 --NLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG  375 (456)
Q Consensus       298 --~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~  375 (456)
                        +.+|+++|+|||||+||++|||+|+|++.+++++|.++||.|++.+++|||++++|+|+++|+++++++++|||.+.+
T Consensus       779 ~~~~~pli~ElGGkN~~IV~~dAdle~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~f~e~L~~~~~~l~vGdP~d~~  858 (1208)
T PRK11905        779 SGPPVPLIAETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRCSALRVLCLQEDVADRVLTMLKGAMDELRIGDPWRLS  858 (1208)
T ss_pred             cCCCCeEEEecCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEehhHHHHHHHHHHHHHHHhcCCCchhcc
Confidence              258999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccC-CCCceEecEEEecCCCChHhhhc-cccceEEeEEEc--cccc
Q 012806          376 VEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG-NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILC--VVTD  451 (456)
Q Consensus       376 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~-~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~--~~~e  451 (456)
                      +++||+|++++++++.++|++++++|+.++.|+.... +.|+|+.|||+. + +++..+.+ +||||++|+.|+  +.+|
T Consensus       859 t~~GPvId~~a~~~i~~~I~~a~~~G~~l~~g~~~~~~~~G~fv~PTVl~-~-~~~~~~~eEiFGPVL~V~~y~~~dlde  936 (1208)
T PRK11905        859 TDVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPAETEKGTFVAPTLIE-I-DSISDLEREVFGPVLHVVRFKADELDR  936 (1208)
T ss_pred             CCccCccCHHHHHHHHHHHHHHHHCCCEEEEccCCCCCCCCeEEeeEEEe-c-CChHHhcCCccCceEEEEEeCCCCHHH
Confidence            9999999999999999999999999998887764322 469999999996 3 56756554 999999999997  5778


Q ss_pred             cccc
Q 012806          452 CTSI  455 (456)
Q Consensus       452 ai~~  455 (456)
                      +|++
T Consensus       937 aI~~  940 (1208)
T PRK11905        937 VIDD  940 (1208)
T ss_pred             HHHH
Confidence            8764

>cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like

Probab=100.00  E-value=1.1e-69  Score=558.50  Aligned_cols=344  Identities=28%  Similarity=0.410  Sum_probs=317.6

Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcC
Q 012806           99 RAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG  178 (456)
Q Consensus        99 ~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~  178 (456)
                      +.+++|++||+  .|+.++..+|.++|.++++.|+++.++|++++++|+|||+.++...|+..+++.++|++..+++..+
T Consensus         2 ~~v~~a~~a~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~   79 (449)
T cd07136           2 SLVEKQRAFFK--TGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKKWMK   79 (449)
T ss_pred             hHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            56899999999  9999999999999999999999999999999999999999998756999999999999998877654


Q ss_pred             c-ccCCC---CCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCc
Q 012806          179 L-TVPGD---GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGV  254 (456)
Q Consensus       179 ~-~~~~~---~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~  254 (456)
                      . ..+..   .+...+..++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..++++++++ +|+|+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~~~a-lP~gv  158 (449)
T cd07136          80 PKRVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKIIEET-FDEEY  158 (449)
T ss_pred             CCccCCccccCCceeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHHHHHh-CCCCE
Confidence            3 22211   2345788999999999999999999999999999999999999999999999999999999998 99999


Q ss_pred             EEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhc
Q 012806          255 LNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYN  334 (456)
Q Consensus       255 v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~  334 (456)
                      +|+++| +.+.+..|++|+ ++.|.||||+++|+.|.+.+++ +++|+++|+|||||+||++|||+|.+++.+++++|.|
T Consensus       159 ~~~v~g-~~~~~~~L~~~~-v~~V~fTGS~~~g~~i~~~aa~-~~~~v~lElgGknp~iV~~dADld~aa~~i~~~~~~~  235 (449)
T cd07136         159 VAVVEG-GVEENQELLDQK-FDYIFFTGSVRVGKIVMEAAAK-HLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLN  235 (449)
T ss_pred             EEEEeC-ChHHHHHHhcCC-CCEEEEECCHHHHHHHHHHHHh-cCCCEEEEecCCCeEEECCCCCHHHHHHHHHHHHHcc
Confidence            999999 556678888765 9999999999999999999887 8999999999999999999999999999999999999


Q ss_pred             CCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCC
Q 012806          335 QGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNR  414 (456)
Q Consensus       335 ~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~  414 (456)
                      +||.|++++|+|||+++||+|+++|+++++++++|+|.+ ++++||++++.+++++.++|+++     ++++||... ..
T Consensus       236 ~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~g~p~~-~~~~gpli~~~~~~~i~~~i~~a-----~~~~gG~~~-~~  308 (449)
T cd07136         236 AGQTCVAPDYVLVHESVKEKFIKELKEEIKKFYGEDPLE-SPDYGRIINEKHFDRLAGLLDNG-----KIVFGGNTD-RE  308 (449)
T ss_pred             cCCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCCCCC-CCCccCcCCHHHHHHHHHHHhcc-----eEEECCCcC-CC
Confidence            999999999999999999999999999999999999997 89999999999999999998764     899999753 36


Q ss_pred             CceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          415 GYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       415 g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      |+|++|||+.+++++|+.+.+ +||||++|+.+++.+|+|++
T Consensus       309 g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~~eai~~  350 (449)
T cd07136         309 TLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEI  350 (449)
T ss_pred             CCEEeeEEEecCCCcChHHhccccCCeeEEEEeCCHHHHHHH
Confidence            899999999999999977775 99999999999999999875

Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD.

>cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins

Probab=100.00  E-value=2.1e-69  Score=555.63  Aligned_cols=348  Identities=27%  Similarity=0.401  Sum_probs=320.2

Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcC
Q 012806           99 RAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG  178 (456)
Q Consensus        99 ~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~  178 (456)
                      .++++|++||+  .|+.++..+|.++|+++++.|++++++|++++++|+|||+.++...|+..+++.++||+....+..+
T Consensus         3 ~a~~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~   80 (432)
T cd07137           3 RLVRELRETFR--SGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRDEVSVLVSSCKLAIKELKKWMA   80 (432)
T ss_pred             HHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            48899999999  8999999999999999999999999999999999999999988646999999999999988766443


Q ss_pred             cc---cCC-CCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCc
Q 012806          179 LT---VPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGV  254 (456)
Q Consensus       179 ~~---~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~  254 (456)
                      ..   .+. ..+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..++++++++ +|+|+
T Consensus        81 ~~~~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~~-~P~gv  159 (432)
T cd07137          81 PEKVKTPLTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLIPEY-LDTKA  159 (432)
T ss_pred             CcccCCCcccCCceeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCe
Confidence            21   111 12234678899999999999999999999999999999999999999999999999999999995 99999


Q ss_pred             EEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhh-h
Q 012806          255 LNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALF-Y  333 (456)
Q Consensus       255 v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~-~  333 (456)
                      +|+++| +.+.+..|+.| .++.|+||||+.+|+.|.+.++. +++|+++|+|||||+||++|||+|.|++.+++++| .
T Consensus       160 v~~v~g-~~~~~~~L~~~-~i~~v~fTGs~~~g~~v~~~aa~-~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~f~~  236 (432)
T cd07137         160 IKVIEG-GVPETTALLEQ-KWDKIFFTGSPRVGRIIMAAAAK-HLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGC  236 (432)
T ss_pred             EEEEeC-CHHHHHHHHhC-CCCEEEEECChHHHHHHHHHHHh-cCCcEEEEccCCCcEEEcCCCCHHHHHHHHHHHhhhc
Confidence            999999 56678888886 69999999999999999999887 89999999999999999999999999999999999 5


Q ss_pred             cCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCC
Q 012806          334 NQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGN  413 (456)
Q Consensus       334 ~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~  413 (456)
                      |+||.|++++|+|||++++|+|+++|+++++++++||| ++++++||++++.+++++.++|++++. |+++++||... .
T Consensus       237 ~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~v~~~i~~a~~-ga~~l~gg~~~-~  313 (432)
T cd07137         237 NNGQACIAPDYVLVEESFAPTLIDALKNTLEKFFGENP-KESKDLSRIVNSHHFQRLSRLLDDPSV-ADKIVHGGERD-E  313 (432)
T ss_pred             cCCCcccCCCEEEEcHHHHHHHHHHHHHHHHHHhCCCC-CccCCcCCcCCHHHHHHHHHHHHHHHh-CCeEEeCCCcC-C
Confidence            99999999999999999999999999999999999999 468999999999999999999999988 89999999753 4


Q ss_pred             CCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          414 RGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       414 ~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      .|+|++|||+.+++++|+.+.+ +||||++|+.++|.+|+|++
T Consensus       314 ~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~  356 (432)
T cd07137         314 KNLYIEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEI  356 (432)
T ss_pred             CCCEEeeEEEecCCCcchhhhcccccCceEEEEeCCHHHHHHH
Confidence            6899999999999999977775 99999999999999999975

Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress.

>PTZ00381 aldehyde dehydrogenase family protein; Provisional

Probab=100.00  E-value=2.5e-69  Score=561.94  Aligned_cols=353  Identities=25%  Similarity=0.368  Sum_probs=325.2

Q ss_pred             CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHH
Q 012806           92 GDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAG  171 (456)
Q Consensus        92 ~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~  171 (456)
                      .+.+|++.+++.|++||+  .|+.++.++|.++|+++++.|++|+++|++++++|+|||..++...|+..++..++|++.
T Consensus         4 ~~~~~i~~av~~a~~a~~--~~~~~~~~~R~~~L~~l~~~l~~~~~~i~~a~~~d~Gk~~~ea~~~Ev~~~~~~i~~~~~   81 (493)
T PTZ00381          4 DNPEIIPPIVKKLKESFL--TGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIEHLLK   81 (493)
T ss_pred             CCHHHHHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            588999999999999999  999999999999999999999999999999999999999999876799999999999988


Q ss_pred             hhhHhcCcc-cCC---CCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHH
Q 012806          172 WADKIHGLT-VPG---DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHE  247 (456)
Q Consensus       172 ~~~~~~~~~-~~~---~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~  247 (456)
                      ..++..... ...   ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+.+++++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~~ll~~  161 (493)
T PTZ00381         82 HLDEYLKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLTK  161 (493)
T ss_pred             HHHHHhCCcccCCccccCCCceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH
Confidence            776654322 111   1234578899999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHH
Q 012806          248 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELA  327 (456)
Q Consensus       248 aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i  327 (456)
                      + +|+|++++++| +.+.+..|+.|+ +|.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+
T Consensus       162 ~-lp~~~v~vv~g-~~~~~~~l~~~~-~d~i~FTGS~~vG~~V~~~aa~-~l~pv~lElGGk~p~iV~~dAdl~~Aa~~i  237 (493)
T PTZ00381        162 Y-LDPSYVRVIEG-GVEVTTELLKEP-FDHIFFTGSPRVGKLVMQAAAE-NLTPCTLELGGKSPVIVDKSCNLKVAARRI  237 (493)
T ss_pred             h-CCcCEEEEecC-CHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHh-cCCcEEEEcCCCCceEEcCCCCHHHHHHHH
Confidence            6 99999999998 677888888876 9999999999999999999988 899999999999999999999999999999


Q ss_pred             HHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeC
Q 012806          328 HFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECG  407 (456)
Q Consensus       328 ~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~g  407 (456)
                      ++++|.|+||.|++++++|||++++|+|+++|++.++++. |++.++++++||++++++++++.++|+   ++|+++++|
T Consensus       238 ~~g~~~naGQ~C~A~~~vlV~~~i~d~f~~~l~~~~~~~~-g~~~~~~~~~gpli~~~~~~ri~~~i~---~~ga~~~~g  313 (493)
T PTZ00381        238 AWGKFLNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFF-GEDPKKSEDYSRIVNEFHTKRLAELIK---DHGGKVVYG  313 (493)
T ss_pred             HHHHHhhcCCcCCCCCEEEEeHHHHHHHHHHHHHHHHHHh-CCCCccCCCcCCCCCHHHHHHHHHHHH---hCCCcEEEC
Confidence            9999999999999999999999999999999999999986 766688999999999999999999996   368999999


Q ss_pred             CcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          408 GDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       408 g~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      |.. +..++|++|||+.+++++|+.+.+ +||||++|+.|+|.+|+|++
T Consensus       314 G~~-~~~~~~i~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~  361 (493)
T PTZ00381        314 GEV-DIENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEF  361 (493)
T ss_pred             CCc-CCCCCeEeeEEEecCCCCChHHhccccCCeEEEEeeCCHHHHHHH
Confidence            975 346889999999999999977776 99999999999999999875

>cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like

Probab=100.00  E-value=9e-69  Score=560.12  Aligned_cols=373  Identities=17%  Similarity=0.200  Sum_probs=332.3

Q ss_pred             CCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcC
Q 012806           69 AASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNG  148 (456)
Q Consensus        69 ~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~G  148 (456)
                      +.+|++.+++||+|++++++++.+   |++.+|++|++|++  .|++++..+|.++|++++++|.+++++|++++++|+|
T Consensus        61 ~~~~~~~~~~~P~~~~l~~~~~~a---dv~~ai~aA~~A~~--~W~~~~~~~R~~il~~~a~~l~~~~~ela~a~~~e~G  135 (549)
T cd07127          61 GASGWVGGEVSPYGVELGVTYPQC---DPDALLAAARAAMP--GWRDAGARARAGVCLEILQRLNARSFEMAHAVMHTTG  135 (549)
T ss_pred             CCCCCeeeeECCCCCcEEEEEchH---HHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHC
Confidence            556788999999999999999887   99999999999999  9999999999999999999999999999999999999


Q ss_pred             CChhhhhhc----cHHHHHHHHHHHHHhhhHhcCcccCC--CC-----CcceEEEeeccceEEEEccCCchHHHHHhHHH
Q 012806          149 KPYVQSLKS----EVPMVVRLLHYYAGWADKIHGLTVPG--DG-----NYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVA  217 (456)
Q Consensus       149 k~~~~a~~~----ev~~~~~~l~~~~~~~~~~~~~~~~~--~~-----~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~  217 (456)
                      |++.++...    |++.+++.++|+++...++.+.....  .+     .......++|+||+++|+|||||+++.+.+++
T Consensus       136 k~~~~a~qa~~~~evd~a~e~~~~a~~~~~~~~~~~~w~~~~~~~~~l~~~k~~~~~P~GVv~vI~p~nfP~~~~~~~i~  215 (549)
T cd07127         136 QAFMMAFQAGGPHAQDRGLEAVAYAWREMSRIPPTAEWEKPQGKHDPLAMEKTFTVVPRGVALVIGCSTFPTWNGYPGLF  215 (549)
T ss_pred             CCHHHHHhcccHHHHHHHHHHHHHHHHHHHhccccccccCCCCCcccccccceeEEecccEEEEEeCcCChHHHHHHHHH
Confidence            999877532    79999999999999887766543211  11     11123477999999999999999999999999


Q ss_pred             HHhhcCCEEEEecCCCchHHHH----HHHHHHHHcCCCCCcEEEEeCC-chhhHHHHhcCCCccEEEEecChhHHHHHHH
Q 012806          218 PALTCGNTIVLKSAEQTPLTAL----YVAKLFHEAGLPPGVLNVVSGY-GPTAGAALASHMDVDKLSFTGHCDTGKIVQE  292 (456)
Q Consensus       218 ~ALaaGN~vvlKps~~~p~~~~----~l~~ll~~aGlP~g~v~vv~g~-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~  292 (456)
                      +||++||+||+|||+.+|+++.    .+.++|.++|+|+|+||+++++ +.++++.|+.|++++.|.||||+.+|+.|.+
T Consensus       216 ~ALaaGN~VVvKPs~~a~ls~~~~~~~i~~~l~eAGlP~gvv~~v~g~~~~~~~~~L~~~p~v~~I~FTGS~~~G~~i~~  295 (549)
T cd07127         216 ASLATGNPVIVKPHPAAILPLAITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWLEA  295 (549)
T ss_pred             HHHhcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcCcccEEEEeCCCcHHHHHHHHhCCCCCEEEEECCHHHHHHHHH
Confidence            9999999999999999998764    5668999999999999999985 4678999999999999999999999999999


Q ss_pred             HHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccc---------cHHHHHHHHHHHH
Q 012806          293 LAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHER---------VYDEFVEKAKARA  363 (456)
Q Consensus       293 ~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~---------v~~~f~~~l~~~~  363 (456)
                      .++.   +++++|+|||||+||++|+|++.+++.+++++|.|+||.|++++|||||++         +||+|+++|++++
T Consensus       296 ~a~~---~~v~~ElGGkn~~IV~~dADl~~aa~~i~~~~f~~sGQ~C~a~~ri~V~~s~i~~~~g~~i~d~f~~~L~~~~  372 (549)
T cd07127         296 NARQ---AQVYTEKAGVNTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTTPQNIYVPRDGIQTDDGRKSFDEVAADLAAAI  372 (549)
T ss_pred             Hhcc---CcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHccCCCCCCCCCEEEEECCccccccchhHHHHHHHHHHHHH
Confidence            8864   799999999999999999999999999999999999999999999999999         8999999999999


Q ss_pred             hhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccC---CCC-ceEecEEEecCCCChHhhhc-ccc
Q 012806          364 MRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG---NRG-YFVQPTVFSDVTVSFISLLQ-FLI  438 (456)
Q Consensus       364 ~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~---~~g-~~i~PtVl~~v~~~~~~~~~-~fg  438 (456)
                      +++ +|||.+..+.+||++++++++++.+    +++.|+ +++||....   ..| +|++|||+.+++++|+.+.+ +||
T Consensus       373 ~~l-~Gdp~~~~~~~Gpli~~~~~~ri~~----a~~~g~-vl~gg~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FG  446 (549)
T cd07127         373 DGL-LADPARAAALLGAIQSPDTLARIAE----ARQLGE-VLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFG  446 (549)
T ss_pred             HHh-cCCccccccccCCcCCHHHHHHHHH----HHhCCC-EEEcCCcCCCcCCCCceEEeCEEEEeCCCCCHHHcCCCcC
Confidence            999 9999999999999999999999865    555665 778876532   234 46799999988899977775 999


Q ss_pred             ceEEeEEEccccccccc
Q 012806          439 PIFSFIILCVVTDCTSI  455 (456)
Q Consensus       439 Pv~~vv~~~~~~eai~~  455 (456)
                      ||++|+.++|.+|+|++
T Consensus       447 PVl~V~~~~d~~eai~~  463 (549)
T cd07127         447 PIAFVVATDSTDHSIEL  463 (549)
T ss_pred             ceEEEEEeCCHHHHHHH
Confidence            99999999999998875

Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes.

>cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like

Probab=100.00  E-value=8.8e-69  Score=552.16  Aligned_cols=349  Identities=28%  Similarity=0.343  Sum_probs=319.4

Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCC-hhhhhhccHHHHHHHHHHHHHhhhHhc
Q 012806           99 RAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKP-YVQSLKSEVPMVVRLLHYYAGWADKIH  177 (456)
Q Consensus        99 ~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~-~~~a~~~ev~~~~~~l~~~~~~~~~~~  177 (456)
                      ..+++|++||+  .|+.++..+|.++|+++++.|++++++|++++++|+||+ ..++...|+..+++.++||+....+..
T Consensus         2 ~~~~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~ea~~~ev~~~i~~~~~~~~~~~~~~   79 (434)
T cd07133           2 ALLERQKAAFL--ANPPPSLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLKKWM   79 (434)
T ss_pred             hHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            36788999999  999999999999999999999999999999999999985 566654699999999999998887655


Q ss_pred             Cccc-CCC---CCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCC
Q 012806          178 GLTV-PGD---GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPG  253 (456)
Q Consensus       178 ~~~~-~~~---~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g  253 (456)
                      +... ...   .+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..+.++++++ +|+|
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l~~~a-lP~g  158 (434)
T cd07133          80 KPSRRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAEY-FDED  158 (434)
T ss_pred             CCcccCCccccCCCceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh-CCcC
Confidence            4332 111   2345788999999999999999999999999999999999999999999999999999999997 9999


Q ss_pred             cEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhh
Q 012806          254 VLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFY  333 (456)
Q Consensus       254 ~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~  333 (456)
                      ++++++| +.+.++.|..|+ +|.|+||||+.+|+.|.+.++. +++|+++|+|||||+||++|+|++.|++.+++++|.
T Consensus       159 ~~~~v~g-~~~~~~~l~~~~-v~~V~ftGs~~~g~~v~~~aa~-~~~~~~lElgGk~~~iV~~dadl~~aa~~i~~~~~~  235 (434)
T cd07133         159 EVAVVTG-GADVAAAFSSLP-FDHLLFTGSTAVGRHVMRAAAE-NLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLL  235 (434)
T ss_pred             eEEEEeC-ChHHHHHHHhCC-CCEEEEeCchHHHHHHHHHHHh-cCceEEEEccCCCcEEEeCCCCHHHHHHHHHHHHhc
Confidence            9999999 556788888765 9999999999999999999888 899999999999999999999999999999999999


Q ss_pred             cCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccC-
Q 012806          334 NQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG-  412 (456)
Q Consensus       334 ~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~-  412 (456)
                      |+||.|++++|||||++++|+|+++|+++++++++|+  ++++++||++++++++++.++|++++++|+++++||.... 
T Consensus       236 ~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~--~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~  313 (434)
T cd07133         236 NAGQTCVAPDYVLVPEDKLEEFVAAAKAAVAKMYPTL--ADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGED  313 (434)
T ss_pred             cCCCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCC--CCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCcC
Confidence            9999999999999999999999999999999999886  4678999999999999999999999999999999987533 


Q ss_pred             -CCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          413 -NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       413 -~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                       .+|+|++|||+.+++++|+++.+ +||||++|+.+++.+|+|++
T Consensus       314 ~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~  358 (434)
T cd07133         314 FAATRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDY  358 (434)
T ss_pred             CCCCcEEeeEEEeCCCCCCcccccccCCCeeEEEEeCCHHHHHHH
Confidence             46899999999999999977765 99999999999999999975

Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD.

>cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like

Probab=100.00  E-value=5.1e-68  Score=546.33  Aligned_cols=350  Identities=29%  Similarity=0.359  Sum_probs=323.7

Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcC
Q 012806           99 RAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG  178 (456)
Q Consensus        99 ~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~  178 (456)
                      +++++|++||+  .|+.++..+|.++|.++++.|++++++|++++++|+|||..++...|+..+++.+++++....+..+
T Consensus         2 ~~~~~a~~a~~--~W~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~   79 (433)
T cd07134           2 RVFAAQQAHAL--ALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEILPVLSEINHAIKHLKKWMK   79 (433)
T ss_pred             hHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            57899999999  9999999999999999999999999999999999999999998656999999999999987655433


Q ss_pred             cc-cCCC---CCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCc
Q 012806          179 LT-VPGD---GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGV  254 (456)
Q Consensus       179 ~~-~~~~---~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~  254 (456)
                      .. .+.+   .+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+.++++++ +|+|+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~~~a-~p~g~  158 (433)
T cd07134          80 PKRVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREA-FDEDE  158 (433)
T ss_pred             CcccCCccccCCCceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCE
Confidence            21 2111   2445689999999999999999999999999999999999999999999999999999999999 99999


Q ss_pred             EEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhc
Q 012806          255 LNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYN  334 (456)
Q Consensus       255 v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~  334 (456)
                      +++++| +.+.+..|++|+ ++.|.||||+.+|+.|.+.+++ +++|+++|+||+||+||++|||++.|++.+++++|.+
T Consensus       159 v~~v~g-~~~~~~~l~~~~-v~~v~ftGs~~~g~~i~~~aa~-~~~~~~lelgG~~~~iV~~dAD~~~aa~~i~~~~~~~  235 (433)
T cd07134         159 VAVFEG-DAEVAQALLELP-FDHIFFTGSPAVGKIVMAAAAK-HLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFLN  235 (433)
T ss_pred             EEEEeC-ChhHHHHHHhCC-CCEEEEECChHHHHHHHHHHHh-cCCcEEEEccCCCcEEECCCCCHHHHHHHHHHHhhcC
Confidence            999999 556888999987 9999999999999999999887 7899999999999999999999999999999999999


Q ss_pred             CCCccccCcccccccccHHHHHHHHHHHHhhhhcCCC-CCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCC
Q 012806          335 QGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDP-FKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGN  413 (456)
Q Consensus       335 ~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p-~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~  413 (456)
                      +||.|+++++||||++++|+|+++|+++++.++.|+| .+.++++||++++.+++++.++|++++++|+++++||... .
T Consensus       236 ~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~-~  314 (433)
T cd07134         236 AGQTCIAPDYVFVHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQFD-A  314 (433)
T ss_pred             cCCcccCCcEEEECHHHHHHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHHHHhCCCEEEeCCCcC-C
Confidence            9999999999999999999999999999999988887 8889999999999999999999999999999999999753 4


Q ss_pred             CCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          414 RGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       414 ~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      .|+|++|||+.+++++|+.+.+ +||||++|+.++|.+|+|++
T Consensus       315 ~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~  357 (433)
T cd07134         315 AQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEY  357 (433)
T ss_pred             CCCEEeeEEEeCCCCccHHHhccccCceEEEEEeCCHHHHHHH
Confidence            5899999999999999977775 99999999999999999875

Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD.

>cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins

Probab=100.00  E-value=1.2e-66  Score=537.24  Aligned_cols=344  Identities=28%  Similarity=0.372  Sum_probs=314.1

Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcC
Q 012806           99 RAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG  178 (456)
Q Consensus        99 ~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~  178 (456)
                      +++++|++||+  .|+.++..+|.++|+++++.|++++++|++++++|+|||..++...|+..+++.++++++.+.+...
T Consensus         2 ~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~   79 (443)
T cd07132           2 EAVRRAREAFS--SGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEILLVKNEIKYAISNLPEWMK   79 (443)
T ss_pred             hHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            58899999999  9999999999999999999999999999999999999999998657999999999999988776643


Q ss_pred             cccCC----CCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCc
Q 012806          179 LTVPG----DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGV  254 (456)
Q Consensus       179 ~~~~~----~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~  254 (456)
                      .....    ......++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+.++++++ +|+|+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~-lp~gv  158 (443)
T cd07132          80 PEPVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPKY-LDKEC  158 (443)
T ss_pred             CccCCCccccCCCceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCe
Confidence            32211    11245788899999999999999999999999999999999999999999999999999999985 99999


Q ss_pred             EEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhc
Q 012806          255 LNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYN  334 (456)
Q Consensus       255 v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~  334 (456)
                      +++++|++.+ +..|+. +++|.|.||||+.+|+.|.+.+++ +++|+++|+|||+|+||++|||++.|++.+++++|.|
T Consensus       159 ~~vv~g~~~~-~~~l~~-~~vd~V~fTGs~~~g~~i~~~a~~-~~~~~~lElgG~~p~iV~~dADl~~aa~~i~~~~f~~  235 (443)
T cd07132         159 YPVVLGGVEE-TTELLK-QRFDYIFYTGSTSVGKIVMQAAAK-HLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFIN  235 (443)
T ss_pred             EEEEeCCHHH-HHHHHh-CCCCEEEEECChHHHHHHHHHHHh-hCCceEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhc
Confidence            9999995554 455665 589999999999999999999887 8999999999999999999999999999999999999


Q ss_pred             CCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCC
Q 012806          335 QGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNR  414 (456)
Q Consensus       335 ~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~  414 (456)
                      +||.|++++|||||++++|+|+++|++++++++.|+| ++++++||++++++++++.++|++     +++++||... ..
T Consensus       236 ~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~v~~~i~~-----a~~~~gg~~~-~~  308 (443)
T cd07132         236 AGQTCIAPDYVLCTPEVQEKFVEALKKTLKEFYGEDP-KESPDYGRIINDRHFQRLKKLLSG-----GKVAIGGQTD-EK  308 (443)
T ss_pred             CCCceeCCcEEEEcHHHHHHHHHHHHHHHHHhcCCCC-CcccccCCcCCHHHHHHHHHHHhC-----CEEEeCCccC-CC
Confidence            9999999999999999999999999999999998988 788999999999999999999873     4899999753 35


Q ss_pred             CceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          415 GYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       415 g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      |+|++|||+.+++++|+.+.+ +||||++|+.++|.+|+|++
T Consensus       309 ~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~  350 (443)
T cd07132         309 ERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEF  350 (443)
T ss_pred             CCEEeeEEEeCCCCCChHHhccccCceeEEEEeCCHHHHHHH
Confidence            899999999999999977775 99999999999999999975

NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes.

>cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins

Probab=100.00  E-value=7.1e-66  Score=530.03  Aligned_cols=344  Identities=30%  Similarity=0.408  Sum_probs=314.3

Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcC
Q 012806           99 RAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG  178 (456)
Q Consensus        99 ~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~  178 (456)
                      +++++|++||+  .|+.++..+|.++|+++++.|++++++|++++++|+|||+.++...|+..+++.+++++....+..+
T Consensus         2 ~~v~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~~~~~Ev~~~~~~~~~~~~~~~~~~~   79 (426)
T cd07087           2 ELVARLRETFL--TGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVVLGEIDHALKHLKKWMK   79 (426)
T ss_pred             hHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            48899999999  8999999999999999999999999999999999999998777656999999999999988766543


Q ss_pred             cc-cCC---CCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCc
Q 012806          179 LT-VPG---DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGV  254 (456)
Q Consensus       179 ~~-~~~---~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~  254 (456)
                      .. ...   ..+...+..++|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++..++++|++ |+|+|+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~~~-~~P~gv  158 (426)
T cd07087          80 PRRVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLIPK-YFDPEA  158 (426)
T ss_pred             CcccCCccccCCCceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH-hCCCCE
Confidence            22 111   1234578889999999999999999999999999999999999999999999999999999999 699999


Q ss_pred             EEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhc
Q 012806          255 LNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYN  334 (456)
Q Consensus       255 v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~  334 (456)
                      +++++|+ .+.+..|+.|+ ++.|.||||+++|+.|.+.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.+
T Consensus       159 ~~vv~g~-~~~~~~l~~~~-v~~V~ftGs~~~g~~i~~~a~~-~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~  235 (426)
T cd07087         159 VAVVEGG-VEVATALLAEP-FDHIFFTGSPAVGKIVMEAAAK-HLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLN  235 (426)
T ss_pred             EEEEeCC-chHHHHHHhCC-CCEEEEeCChHHHHHHHHHHHh-hCCceEEeccCCCceEecCCCCHHHHHHHHHHHHHhc
Confidence            9999984 45688899998 9999999999999999999988 8999999999999999999999999999999999999


Q ss_pred             CCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCC
Q 012806          335 QGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNR  414 (456)
Q Consensus       335 ~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~  414 (456)
                      +||.|+++++||||++++|+|+++|++++++++.|+| ++.+++||++++++++++.++++++     ++++||... ..
T Consensus       236 ~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~~~~-~~~~~~gpli~~~~~~~~~~~i~~a-----~v~~gg~~~-~~  308 (426)
T cd07087         236 AGQTCIAPDYVLVHESIKDELIEELKKAIKEFYGEDP-KESPDYGRIINERHFDRLASLLDDG-----KVVIGGQVD-KE  308 (426)
T ss_pred             cCCccccCCEEEEcHHHHHHHHHHHHHHHHHHcCCCC-ccCCCcCCCCCHHHHHHHHHHHhcc-----eEEeCCccC-CC
Confidence            9999999999999999999999999999999986666 4789999999999999999999765     789998653 36


Q ss_pred             CceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          415 GYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       415 g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      |+|++|||+.+++++|+.+.+ +||||++|+.++|.+|+|++
T Consensus       309 g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~  350 (426)
T cd07087         309 ERYIAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEF  350 (426)
T ss_pred             CCEEeeEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHH
Confidence            899999999999999977775 99999999999999999875

ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate.

>KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism]

Probab=100.00  E-value=8.1e-67  Score=505.00  Aligned_cols=371  Identities=38%  Similarity=0.716  Sum_probs=349.5

Q ss_pred             CceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 012806           59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEE  138 (456)
Q Consensus        59 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~  138 (456)
                      +.||+|+|+++..++|++.+||.||.+|++++.++..|+++|+.+|+.||..|.|.+++..+|.+.|.++++++++|.++
T Consensus       423 ~~fi~g~fv~~~~~~t~~tinp~~~~~ic~~~la~v~dvd~av~aak~afe~g~w~~~sar~rg~~~y~la~lme~h~ee  502 (881)
T KOG2452|consen  423 QLFIGGEFVDAEGAKTSETINPTDGSVICQVSLAQVTDVDKAVAAAKGAFENGRWGKISARDRGRLMYRLADLMEQHQEE  502 (881)
T ss_pred             hhccCcEeecccCCccccccCCCCCCeeEEeehhHhhhHHHHHHHHhhhhhcCcccccchhhhhhhhhhccchhhhccch
Confidence            57999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCC----CCcceEEEeeccceEEEEccCCchHHHHHh
Q 012806          139 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD----GNYHIQTLHEPIGVAGQIVPWNFPLLLFTW  214 (456)
Q Consensus       139 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~  214 (456)
                      |+.+.+++.|.-+..+...-+...++.+|||++|.+++.+.+.|..    ....+.+.++|+|||++|+|||||+.++.|
T Consensus       503 lat~e~ldagavytlalkthvgmsi~~~ryfagwcdkiqg~tipi~~arpn~nl~lt~~epigv~g~i~pwnyplmmlsw  582 (881)
T KOG2452|consen  503 LATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMMLSW  582 (881)
T ss_pred             hhhhhhccccceeeeeehhhcCceehHHHHhhhhhhhccCceeccccCCCCCcceeeecCcceeEEEeccCCchHHHHHH
Confidence            9999999999998888888899999999999999999999998854    334678899999999999999999999999


Q ss_pred             HHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHH
Q 012806          215 KVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA  294 (456)
Q Consensus       215 ~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~  294 (456)
                      +.+.+|++-                 ..++..-    .|++|+++|.|.-+++.|..||+++.|-||||+++|+.|++.|
T Consensus       583 k~aaclaa~-----------------~~k~~e~----sgvini~~gsgslvg~rls~hpdvrkigftgsteig~~im~sc  641 (881)
T KOG2452|consen  583 KTAACLAAQ-----------------VLKFAEL----TGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC  641 (881)
T ss_pred             HHHHHHHHH-----------------Hhhhhhh----cceEEEecCCcchhccccccCCccceeccccchHHHHHHHHHH
Confidence            999999631                 2222222    3899999999999999999999999999999999999999999


Q ss_pred             hhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCC
Q 012806          295 AKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKS  374 (456)
Q Consensus       295 a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~  374 (456)
                      +.+|.|++.+|+||++|+||+.|+|+++|+.+...+.|++.|..|++.-|+||.+++.|+|+.++.+.++++++|+|+|.
T Consensus       642 a~snikkvslelgg~sp~iifad~dl~kav~~~~~~vff~kgenciaagr~fi~~sihd~fv~~~vee~~~~~ig~pldr  721 (881)
T KOG2452|consen  642 AISNVKKVSLELGGESPFIIFADCDLNKAVQMGMSSVFFSKGENCIAAGRLFVEDSIHDEFVRRVVEEVRKMKVGNPLDR  721 (881)
T ss_pred             hhcchheeeeeccCCCceEEEecCcHHHHHHhhccceeecCCcchhhhcceeehhhhhHHHHHHHHHHHHhhccCCcccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEcccc
Q 012806          375 GVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVT  450 (456)
Q Consensus       375 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~  450 (456)
                      +++.||+-.-++..++.+|++.++++||++.+||++.+..|.|++|||++++++.|....| .||||+.|-++.|.|
T Consensus       722 ~t~hgpqnh~ahl~kl~ey~~~~v~~ga~~~~gg~~~~r~g~~f~pti~s~i~d~~f~a~eesfgpim~is~f~d~d  798 (881)
T KOG2452|consen  722 DTDHGPQNHHAHLVKLMEYCQHGVKEGATLVCGGNQVPRPGFFFEPTVFTDVEDHMFIAKEESFGPVMIISRFADGD  798 (881)
T ss_pred             cccCCchhHHHHHHHHHHHHHHHhccCcEEEECCccCCCCCcccCCeeecccchhhhhhhccccCceEEEEecCCCC
Confidence            9999999999999999999999999999999999999999999999999999999955555 999999999998765

>cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins

Probab=100.00  E-value=3.1e-66  Score=530.44  Aligned_cols=333  Identities=21%  Similarity=0.233  Sum_probs=291.2

Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhccHHHHHH--HHHHHHHhhh
Q 012806           97 IDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVR--LLHYYAGWAD  174 (456)
Q Consensus        97 v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~--~l~~~~~~~~  174 (456)
                      +++|+++|++||+  .|+++|..+|.++|+++++.|++|+++|++++++|+|||+.+++ .++.....  ..++++..  
T Consensus         1 ~~~Ai~~A~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~ea~-~~~~~~~~~~~~~~~~~~--   75 (439)
T cd07081           1 LDDAVAAAKVAQQ--GLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRVEDK-VIKNHFAAEYIYNVYKDE--   75 (439)
T ss_pred             CHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHH-HHHHHHHHHHHHHHHhcc--
Confidence            4789999999999  99999999999999999999999999999999999999999887 35554443  23333322  


Q ss_pred             HhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHH----HcCC
Q 012806          175 KIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFH----EAGL  250 (456)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~----~aGl  250 (456)
                       ..+...+.+.+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..++++++    ++|+
T Consensus        76 -~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~~l~~aG~  154 (439)
T cd07081          76 -KTCGVLTGDENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAGA  154 (439)
T ss_pred             -ccCceecCCCCCceEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHHHHHHHHHHcCC
Confidence             12222233223456889999999999999999999999999999999999999999999999999888885    6799


Q ss_pred             CCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHH
Q 012806          251 PPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFA  330 (456)
Q Consensus       251 P~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~  330 (456)
                      |+|++|+++|.+.+.++.|+.|++|++|.||||++    +.+.+++ ++||+++|+|||+|+||++|||+|.|++.++++
T Consensus       155 P~gvv~~v~g~~~~~g~~L~~~~~V~~V~FTGs~~----v~~~aa~-~~k~~~lElGGk~p~IV~~dADl~~Aa~~iv~~  229 (439)
T cd07081         155 PENLIGWIDNPSIELAQRLMKFPGIGLLLATGGPA----VVKAAYS-SGKPAIGVGAGNTPVVIDETADIKRAVQSIVKS  229 (439)
T ss_pred             ChhhEEEEcCCCHHHHHHHHcCCCCCEEEEECCHH----HHHHHHh-cCCCEEEEcCCCCeEEEcCCCCHHHHHHHHHHH
Confidence            99999999997778899999999999999999987    4555666 789999999999999999999999999999999


Q ss_pred             hhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCc-
Q 012806          331 LFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGD-  409 (456)
Q Consensus       331 ~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~-  409 (456)
                      +|+|+||.|++.+|+|||+++||+|+++|++++               ||+++.++++++.++|+++.++|++++.|+. 
T Consensus       230 ~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~---------------gpli~~~~~~~v~~~i~~a~~~Ga~~~gg~~~  294 (439)
T cd07081         230 KTFDNGVICASEQSVIVVDSVYDEVMRLFEGQG---------------AYKLTAEELQQVQPVILKNGDVNRDIVGQDAY  294 (439)
T ss_pred             HhcCCCCCCCCCCEEEEcHHHHHHHHHHHHHcC---------------CccCCHHHHHHHHHHHHhcCCcCCcccCCCHH
Confidence            999999999999999999999999999998863               8999999999999999999999998754432 


Q ss_pred             c-cCCCCceEecE---EEecCC--CChHhhhc-cccceEEeEEEccccccccc
Q 012806          410 R-LGNRGYFVQPT---VFSDVT--VSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       410 ~-~~~~g~~i~Pt---Vl~~v~--~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      . ....|+|++||   ++.+++  ++|+.+.+ +||||++|+++++.||||++
T Consensus       295 ~~~~~~G~~~~pt~~~i~~~~~~~~~~~i~~eE~FGPVl~v~~~~~~dEAi~~  347 (439)
T cd07081         295 KIAAAAGLKVPQETRILIGEVTSLAEHEPFAHEKLSPVLAMYRAANFADADAK  347 (439)
T ss_pred             HHHHHcCCccCCCceEEEEecCCCCCCchhhhCccCceEEEEEcCCHHHHHHH
Confidence            1 11358999998   999988  99977775 99999999999999999964

Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway.

>cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase

Probab=100.00  E-value=1.1e-64  Score=524.64  Aligned_cols=345  Identities=22%  Similarity=0.282  Sum_probs=308.6

Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHh
Q 012806           97 IDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKI  176 (456)
Q Consensus        97 v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~  176 (456)
                      +++|+++|++||+  .|++++..+|.++|+++++.|+++.++|++++++|+|||..++. .|+..+++.++|++..+.+.
T Consensus         1 v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~~~~-~ev~~~~~~l~~~a~~~~~~   77 (454)
T cd07129           1 VDAAAAAAAAAFE--SYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEARLQ-GELGRTTGQLRLFADLVREG   77 (454)
T ss_pred             ChHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHH-HHHHHHHHHHHHHHHHHHhc
Confidence            4789999999999  99999999999999999999999999999999999999999887 69999999999999876542


Q ss_pred             c--CcccCC-------CCCcceEEEeeccceEEEEccCCchHHH--HHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHH
Q 012806          177 H--GLTVPG-------DGNYHIQTLHEPIGVAGQIVPWNFPLLL--FTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLF  245 (456)
Q Consensus       177 ~--~~~~~~-------~~~~~~~~~~~P~Gvv~~i~p~N~P~~~--~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll  245 (456)
                      .  +.....       ..+...+.+++|+|||++|+|||||+.+  .++++++||++||+||+|||+.+|+++.++++++
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~t~~~l~~~~  157 (454)
T cd07129          78 SWLDARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAI  157 (454)
T ss_pred             CCccccccccccccCCCCCccceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCchHHHHHHHHH
Confidence            2  221110       1123457889999999999999999988  4589999999999999999999999999998877


Q ss_pred             H----HcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhC-CCccEEEecCCCCceEEcCCC--
Q 012806          246 H----EAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKS-NLKPVTLELGGKSPFIIFDDA--  318 (456)
Q Consensus       246 ~----~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~-~~~~v~lelgG~~~~iV~~da--  318 (456)
                      .    ++|+|+|++++|+|++.+.+..|+.|+++++|+||||+.+|+.|.+.++++ +++|+++|+|||||+||++|+  
T Consensus       158 ~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~p~~lElGG~n~~iV~~da~~  237 (454)
T cd07129         158 RAALRATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPVFILPGALA  237 (454)
T ss_pred             HHHHHHhCCChhheEEeeCCcHHHHHHHhcCCCccEEEEeCChHHHHHHHHHhhccCccceeEeecCCcCcEEEeCCcch
Confidence            5    889999999999997777899999999999999999999999999988873 589999999999999999999  


Q ss_pred             -CHHHHHHHHHHHhhhcCCCccccCcccccccc-cHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHH
Q 012806          319 -DVDQAVELAHFALFYNQGQCCCAGSRTYVHER-VYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRS  396 (456)
Q Consensus       319 -D~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~-v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~  396 (456)
                       |+|.+++.+++++|.|+||.|++++|||||++ ++|+|+++|+++++++++          ||++++.+.+++.++|++
T Consensus       238 ~dl~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~~i~d~f~~~l~~~~~~~~~----------g~~~~~~~~~~~~~~i~~  307 (454)
T cd07129         238 ERGEAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAPA----------QTMLTPGIAEAYRQGVEA  307 (454)
T ss_pred             HHHHHHHHHHHHHHhcCCCCeecCCceEEEeCcccHHHHHHHHHHHHhccCC----------CCCcChHHHHHHHHHHHH
Confidence             89999999999999999999999999999999 999999999999998875          467777778888889999


Q ss_pred             HHHc-CCeEEeCCcccCCCCceEecEEEecCC---CChHhhhc-cccceEEeEEEccccccccc
Q 012806          397 GIES-NATLECGGDRLGNRGYFVQPTVFSDVT---VSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       397 a~~~-Ga~v~~gg~~~~~~g~~i~PtVl~~v~---~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      ++++ |+++++||... .+|+|++|||+...+   ++|+++.+ +||||++|+.+++.+|+|++
T Consensus       308 a~~~~ga~~l~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~i~~~E~FGPv~~v~~~~~~~eai~~  370 (454)
T cd07129         308 LAAAPGVRVLAGGAAA-EGGNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAV  370 (454)
T ss_pred             HHhcCCcEEEeCCCcC-CCCCccCCEEEEccCCccccchhhcccCCCCeEEEEEeCCHHHHHHH
Confidence            9998 99999999754 468999999998665   67866665 99999999999999998874

Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids.

>cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like

Probab=100.00  E-value=1.5e-64  Score=521.62  Aligned_cols=341  Identities=21%  Similarity=0.199  Sum_probs=306.7

Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhc
Q 012806           98 DRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH  177 (456)
Q Consensus        98 ~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~  177 (456)
                      ++++++|++||+  .|++++.++|.++|.++++.|++++++|++++++|+|||. ++. .|+..++..++||+..+....
T Consensus         2 ~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-~~~-~ev~~~i~~~~~~~~~~~~~~   77 (442)
T cd07084           2 ERALLAADISTK--AARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGW-MFA-ENICGDQVQLRARAFVIYSYR   77 (442)
T ss_pred             hHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCch-hhh-hhhcchHHHHHHHHHHHHhcc
Confidence            679999999999  9999999999999999999999999999999999999999 655 699999999999998876531


Q ss_pred             --Cccc---CCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCC-C
Q 012806          178 --GLTV---PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGL-P  251 (456)
Q Consensus       178 --~~~~---~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGl-P  251 (456)
                        +...   +.......+.+++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..+.++++++|+ |
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~l~~ag~~P  157 (442)
T cd07084          78 IPHEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLP  157 (442)
T ss_pred             ccccccccCCCCccccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHHHHHHhCCCC
Confidence              1111   111134568899999999999999999999999999999999999999999999999999999999998 9


Q ss_pred             CCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEEcCCC-CHHHHHHHHHHH
Q 012806          252 PGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDA-DVDQAVELAHFA  330 (456)
Q Consensus       252 ~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~~da-D~d~aa~~i~~~  330 (456)
                      +|++++++|++. .+..|+.|+++++|+||||+++|+.|.+.++.   +|+++|+||+||+||++|| |+|.+++.++++
T Consensus       158 ~g~~~~v~g~~~-~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a~~---~~v~lElgG~~~~iV~~dadd~~~a~~~i~~~  233 (442)
T cd07084         158 PEDVTLINGDGK-TMQALLLHPNPKMVLFTGSSRVAEKLALDAKQ---ARIYLELAGFNWKVLGPDAQAVDYVAWQCVQD  233 (442)
T ss_pred             ccceEEeeCCcH-HHHHHHcCCCCCEEEEECCHHHHHHHHHhccC---CcEEEeccCcCcEEECCChhhHHHHHHHHHHH
Confidence            999999999776 88999999999999999999999999998764   8999999999999999999 699999999999


Q ss_pred             hhhcCCCccccCcccccccc-cHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHc-CCeEEeCC
Q 012806          331 LFYNQGQCCCAGSRTYVHER-VYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIES-NATLECGG  408 (456)
Q Consensus       331 ~~~~~GQ~C~a~~~v~V~~~-v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~-Ga~v~~gg  408 (456)
                      +|.|+||.|++++|||||++ ++++|+++|+++++++++|     ++++||++++    ++.++|+++.++ |+++++||
T Consensus       234 ~~~~~GQ~C~a~~rl~V~~~~i~~~f~~~l~~~~~~~~~g-----~~~~gpl~~~----~~~~~i~~a~~~gga~~~~gg  304 (442)
T cd07084         234 MTACSGQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLE-----DLLLGPVQTF----TTLAMIAHMENLLGSVLLFSG  304 (442)
T ss_pred             HhcccCCeecCCcEEEEeCCccHHHHHHHHHHHHHhcccC-----ccccChhhhH----HHHHHHHHHHhcCCcEEEeCC
Confidence            99999999999999999999 8999999999999999998     6789999765    456667777778 59999999


Q ss_pred             cccC------CCCceEecEEEecCCCCh---Hhhhc-cccceEEeEEEcc--ccccccc
Q 012806          409 DRLG------NRGYFVQPTVFSDVTVSF---ISLLQ-FLIPIFSFIILCV--VTDCTSI  455 (456)
Q Consensus       409 ~~~~------~~g~~i~PtVl~~v~~~~---~~~~~-~fgPv~~vv~~~~--~~eai~~  455 (456)
                      ....      ..|+|++|||+.+++++|   +++.+ +||||++|+.|+|  .+|+|++
T Consensus       305 ~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~  363 (442)
T cd07084         305 KELKNHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLEL  363 (442)
T ss_pred             cccccCCCCCcCCcccCCeEEEecCcccccchHHheeccCceEEEEEeCCccHHHHHHH
Confidence            7521      258999999999999997   66665 9999999999999  8888864

ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway.

>KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=7.6e-65  Score=481.22  Aligned_cols=383  Identities=27%  Similarity=0.450  Sum_probs=355.5

Q ss_pred             CCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcC
Q 012806           69 AASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNG  148 (456)
Q Consensus        69 ~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~G  148 (456)
                      ..+.+++.++.|.||+.+++++.-++.|+++.|..|++|++  .|.+.+...|.+.|+-+.+.|.+|.|.+++..++|+|
T Consensus        60 ~~~~~~vqCycPatg~yLG~fp~~~~tdide~v~la~kAQk--tW~~ssF~~Rr~fL~~L~~yIi~nQdliaevacrDtG  137 (583)
T KOG2454|consen   60 QQSDKKVQCYCPATGKYLGYFPALSPTDIDERVTLARKAQK--TWAQSSFKLRRQFLRILLKYIIENQDLIAEVACRDTG  137 (583)
T ss_pred             cCCCCceEEecCCCcceeeecccCChhhHHHHHHHHHHHHh--hhhhccHHHHHHHHHHHHHHHhhchhheeeeeecccC
Confidence            44567899999999999999999999999999999999999  9999999999999999999999999999999999999


Q ss_pred             CChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCC----CcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCC
Q 012806          149 KPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDG----NYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGN  224 (456)
Q Consensus       149 k~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN  224 (456)
                      |+..++..+|+..+++.+.|.....++.+..+....+    -...++.++|+||++.|.|||||+...+.+++.||.+||
T Consensus       138 KTmvDAs~GEIlvTlEKI~Wtl~~Ger~L~P~~Rpn~~~~~yKg~~v~yePLGVI~aiVsWNYPfHN~lgPiiaAlFsGN  217 (583)
T KOG2454|consen  138 KTMVDASLGEILVTLEKITWTLSEGERWLKPESRPNGRAMLYKGSRVEYEPLGVIGAIVSWNYPFHNILGPIIAALFSGN  217 (583)
T ss_pred             chhhhhhHhHHHHHHHHhhhhhhcchhhcCCcCCCchhheeeccceEEEeecceEEEeeecCCchhhhhhHHHHHHhcCC
Confidence            9999999999999999999988776655433221111    134678999999999999999999999999999999999


Q ss_pred             EEEEecCCCchHHHHHHHHHH----HHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCc
Q 012806          225 TIVLKSAEQTPLTALYVAKLF----HEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLK  300 (456)
Q Consensus       225 ~vvlKps~~~p~~~~~l~~ll----~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~  300 (456)
                      .+|+|.|+++.++.....+++    +..|-|+++|+++++- ++.+++|.+|+.++.+.|.||+.+++.|++.+++ .++
T Consensus       218 aIVvK~SE~~~WS~~fy~e~ir~~L~a~g~~p~LVq~itcl-pd~a~~ltSh~g~khitFiGSqpvak~i~~~AAk-~LT  295 (583)
T KOG2454|consen  218 AIVVKVSEHASWSGCFYFEIIRAALAAVGAPPNLVQVITCL-PDTAEALTSHSGVKHITFIGSQPVAKMIMRNAAK-TLT  295 (583)
T ss_pred             eEEEEeecceeeehhhHHHHHHHHHHHcCCCcchhheeecC-cchHhHhhcCCCcceEEEecCcHHHHHHHHhhhh-hcC
Confidence            999999999999887777654    5569999999999994 5788999999999999999999999999999999 899


Q ss_pred             cEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCC
Q 012806          301 PVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP  380 (456)
Q Consensus       301 ~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gp  380 (456)
                      |+++|||||+++||++|+|++..+..++++.|..+||.|...+|++||+++||.|+..|-++++.++.|.|...+.+||.
T Consensus       296 Pv~lELGGKDafIi~dda~l~~v~si~mRGtfQSsGQNCiGiER~iv~k~~Yd~~i~~l~~rv~s~r~G~~~~~~vDMGA  375 (583)
T KOG2454|consen  296 PVTLELGGKDAFIICDDADLSHVASIAMRGTFQSSGQNCIGIERFIVHKDIYDAFIGQLTKRVKSVRAGPPLTGRVDMGA  375 (583)
T ss_pred             cEEEeecCcccEEEeccccHHHHHHHHHhhhhhhcCCcccceeEEEEecchHHHHHHHHHHHHHHHHcCCCccCccchhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHHHHHHHHHHHcCCeEEeCCcccC----CCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          381 QIDPEQFQKVLRYIRSGIESNATLECGGDRLG----NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       381 li~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~----~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      |++..++++++++|++|+++||+++.||.+.+    ..|.|++||+|.|++++|++.+| .||||+++++.++.|++|+|
T Consensus       376 m~s~nrfdhLesLv~DAv~KGArl~~gGsrF~Hpkyp~g~YF~PTlLvdvt~eMKIaqeE~FgPI~~im~ak~~eh~i~l  455 (583)
T KOG2454|consen  376 MCSQNRFDHLESLVNDAVDKGARLAVGGSRFGHPKYPVGQYFPPTLLVDVTHEMKIAQEEAFGPIMPIMQAKTDEHVIKL  455 (583)
T ss_pred             hhhccchHHHHHHHHHHHhhcchhhhcccccCCCCCCcccccCCeEEEecCchhhhHhhhccccchhhhhcCChHHHHhh
Confidence            99999999999999999999999999998754    47999999999999999977776 99999999999999999986

>cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family

Probab=100.00  E-value=3e-63  Score=513.23  Aligned_cols=354  Identities=50%  Similarity=0.800  Sum_probs=331.6

Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhc
Q 012806           98 DRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH  177 (456)
Q Consensus        98 ~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~  177 (456)
                      +++++.|++|++  .|+.++.++|.++|.++++.|.++.++|+++++.|+||+..++. .|+..+++.+++++...++..
T Consensus         1 ~~av~~a~~a~~--~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~etG~~~~~~~-~ei~~~i~~l~~~~~~~~~~~   77 (432)
T cd07078           1 DAAVAAARAAFK--AWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEAL-GEVARAADTFRYYAGLARRLH   77 (432)
T ss_pred             CHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence            368999999999  99999999999999999999999999999999999999988876 699999999999998887765


Q ss_pred             Cccc-CCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEE
Q 012806          178 GLTV-PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLN  256 (456)
Q Consensus       178 ~~~~-~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~  256 (456)
                      +... ....+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|+++|+|+++++
T Consensus        78 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~ag~p~~~~~  157 (432)
T cd07078          78 GEVIPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLN  157 (432)
T ss_pred             CccccccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcCcEE
Confidence            5442 223456678899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCC
Q 012806          257 VVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQG  336 (456)
Q Consensus       257 vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~G  336 (456)
                      +++|++.+.+..|..|+++|.|.||||..+++.+.+.+++ +++|+++|+||++++||++|+|++.+++.+++++|.++|
T Consensus       158 ~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~~~~v~~~a~~-~~~~~~~e~gg~~~~iV~~~ad~~~aa~~i~~~~~~~~G  236 (432)
T cd07078         158 VVTGDGDEVGAALASHPRVDKISFTGSTAVGKAIMRAAAE-NLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAG  236 (432)
T ss_pred             EEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-ccCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccC
Confidence            9999776688999999999999999999999999999998 799999999999999999999999999999999999999


Q ss_pred             CccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCC-CC
Q 012806          337 QCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGN-RG  415 (456)
Q Consensus       337 Q~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~-~g  415 (456)
                      |.|+++++||||++++++|+++|+++++++++|+|+|+++++||++++++++++.++|+++.++|+++++||..... .|
T Consensus       237 q~C~a~~~i~v~~~~~~~~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~gg~~~~~~~g  316 (432)
T cd07078         237 QVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRLEGGKG  316 (432)
T ss_pred             CCccCCceEEEcHHHHHHHHHHHHHHHHccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999976433 58


Q ss_pred             ceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          416 YFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       416 ~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      +|++|||+.+++++++.+.+ +||||++|+.+++.+|+|++
T Consensus       317 ~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~  357 (432)
T cd07078         317 YFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIEL  357 (432)
T ss_pred             cEEccEEEecCCCCChhhhCCCcCceEEEEEeCCHHHHHHH
Confidence            99999999999999966665 99999999999999999975

The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer

>COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=3.2e-63  Score=489.17  Aligned_cols=375  Identities=32%  Similarity=0.492  Sum_probs=340.3

Q ss_pred             CceeCCEEeeCCCCCeeeeecCCC-CceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 012806           59 KNLINGQFVDAASGKTFPVYDPRT-AEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME  137 (456)
Q Consensus        59 ~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~  137 (456)
                      .-.++|+.+.  .|+..+++||.+ .+++++|.+++.+|+++|++.|..++.  .|...+..+|+.+|+|++++++.+..
T Consensus       115 ~p~~~~~~~~--~g~~~pV~nPad~~dvVG~V~ea~~~~v~~A~~~A~~a~p--~W~atp~~eRAaiL~raAdlme~~m~  190 (769)
T COG4230         115 APIVNGAPVA--GGEPRPVINPADPDDIVGTVTEATEADVEQALEAAVAAAP--IWSATPPAERAAILERAADLMEAQMP  190 (769)
T ss_pred             ccccCCCcCC--CCCcccccCCCCHhHCeeeeeecCHHHHHHHHHHHHhhCc--ccccCCHHHHHHHHHHHHHHHHHHHH
Confidence            3467888754  678899999998 579999999999999999999999999  99999999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHH
Q 012806          138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVA  217 (456)
Q Consensus       138 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~  217 (456)
                      +|..++++|.||+...+. .||.++++++|||+...+.-.+.           ..++|+|++.+|+|||||+.++..+++
T Consensus       191 ~L~~L~~REAGKtl~naI-AEVREAVDFlrYYA~~ar~~~g~-----------~~~~~~G~vVcISPWNFPLAIFtGqia  258 (769)
T COG4230         191 QLMGLLVREAGKTLSNAI-AEVREAVDFLRYYAGQARDTFGN-----------LTHRPLGPVVCISPWNFPLAIFTGQIA  258 (769)
T ss_pred             HHHHHHHHHhccchhhHH-HHHHHHHHHHHHHHHHHhcccCc-----------cccCCCCcEEEECCCCchHHHHHhHHH
Confidence            999999999999999987 69999999999999988652221           347899999999999999999999999


Q ss_pred             HHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhC
Q 012806          218 PALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKS  297 (456)
Q Consensus       218 ~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~  297 (456)
                      .||++||+|+-||.++||+.+..-+++|+++|+|++++++++|+|.++|..|..+++++.|.||||+++++.|.+..+++
T Consensus       259 AAL~aGN~VlAKPAEqTpLIAa~aV~ll~eAGvP~~~lqLLpG~G~tvGa~L~~darv~GV~FTGSTevA~li~~~LA~r  338 (769)
T COG4230         259 AALAAGNSVLAKPAEQTPLIAAQAVRLLHEAGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKR  338 (769)
T ss_pred             HHHHcCCccccCccccccHHHHHHHHHHHHcCCChhhHHhcCCCCcccchhhhcCcccceEEEeCcHHHHHHHHHHHhhc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999998886


Q ss_pred             CC--ccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCC
Q 012806          298 NL--KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG  375 (456)
Q Consensus       298 ~~--~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~  375 (456)
                      ++  .|.+.|.||-|.+||+.+|--++++..++.|+|..+||.|++...+++++++.|..+++|+-.+.++++|+|..-.
T Consensus       339 ~g~~~pLIAETGGqNAMIVDSsAL~EQVv~Dvl~SAFdSAGQRCSALRvLclQ~DvAd~~l~mLKGAm~el~~G~p~~l~  418 (769)
T COG4230         339 QGRPIPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQEDVADRILTMLKGAMAELRVGNPDRLT  418 (769)
T ss_pred             CCCCCceEeccCCcceEEeechhhHHHHHHHHHHHHhhcccchhhhhhhhhhhhhHHHHHHHHHHHHHHHhccCCcccee
Confidence            55  5779999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccC-CCCceEecEEEecCCCChHhhhccccceEEeEEEcccc
Q 012806          376 VEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG-NRGYFVQPTVFSDVTVSFISLLQFLIPIFSFIILCVVT  450 (456)
Q Consensus       376 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~-~~g~~i~PtVl~~v~~~~~~~~~~fgPv~~vv~~~~~~  450 (456)
                      +|+||+|+.++...+.++|+..+..|-.+..-....+ .+|.|+.||+++ ++.-.+.-.|+||||+.|++|+-.+
T Consensus       419 tDVGPVIdaEAk~~i~~Hi~~mr~~gr~v~q~~~~~~~q~GtFv~Ptl~E-l~~~~eL~rEVFGPVLHVvRy~~~~  493 (769)
T COG4230         419 TDVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTLIE-LENLDELQREVFGPVLHVVRYKRDE  493 (769)
T ss_pred             ccccccccHHHHHHHHHHHHHHHhcccchhhccCCCccCCceeeCceeEE-cCCHHHHHHHhccceeEEEEecHHH
Confidence            9999999999999999999999888744443222111 479999999995 4433323446999999999997543

>cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like

Probab=100.00  E-value=7.3e-64  Score=512.98  Aligned_cols=330  Identities=20%  Similarity=0.240  Sum_probs=290.6

Q ss_pred             HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhh
Q 012806           94 AEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWA  173 (456)
Q Consensus        94 ~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~  173 (456)
                      -+|++.++++|++||+  .|++++.++|.++|+++++.|+++.++|++++++|+|||..++.       +..++|++...
T Consensus         3 ~~~v~~av~~A~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~-------~~~~~~~~~~~   73 (429)
T cd07121           3 FATVDDAVAAAKAAQK--QYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGRVEDK-------IAKNHLAAEKT   73 (429)
T ss_pred             hhhHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-------HHHHHHHHHhc
Confidence            3789999999999999  99999999999999999999999999999999999999987653       34566665422


Q ss_pred             hHhcCcc-c-C---CCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHH--
Q 012806          174 DKIHGLT-V-P---GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFH--  246 (456)
Q Consensus       174 ~~~~~~~-~-~---~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~--  246 (456)
                      .   +.. . +   ...+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..++++++  
T Consensus        74 ~---~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~~~  150 (429)
T cd07121          74 P---GTEDLTTTAWSGDNGLTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKA  150 (429)
T ss_pred             C---cccccccccccCCCcceEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHHHH
Confidence            1   111 1 1   1112345788899999999999999999999999999999999999999999999999999884  


Q ss_pred             --HcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEEcCCCCHHHHH
Q 012806          247 --EAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAV  324 (456)
Q Consensus       247 --~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa  324 (456)
                        ++|+|+|++|+++|.+.+.+..|++|++||+|+||||+.+|+.|++.     +||+++|+|||+|+||++|||+|.|+
T Consensus       151 ~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~I~fTGs~~~g~~v~~~-----~k~~~lelGGk~p~iV~~dADld~Aa  225 (429)
T cd07121         151 IAEAGGPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVVKAALSS-----GKKAIGAGAGNPPVVVDETADIEKAA  225 (429)
T ss_pred             HHHcCCCcceEEEecCCChHHHHHHHcCCCccEEEeeCCHHHHHHHHhC-----CCceEeecCCCceEEEecCCCHHHHH
Confidence              78999999999999777789999999999999999999999999864     58999999999999999999999999


Q ss_pred             HHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHc--CC
Q 012806          325 ELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIES--NA  402 (456)
Q Consensus       325 ~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~--Ga  402 (456)
                      +.+++++|+|+||.|++++|+|||+++||+|+++|++.      +         .+++++++++++.++|+++.+.  |+
T Consensus       226 ~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~L~~~------~---------~~~i~~~~~~~v~~~i~~a~~~~~ga  290 (429)
T cd07121         226 RDIVQGASFDNNLPCIAEKEVIAVDSVADYLIAAMQRN------G---------AYVLNDEQAEQLLEVVLLTNKGATPN  290 (429)
T ss_pred             HHHHhcccccCCCCCCccceEEEeHHHHHHHHHHHHHC------C---------CEEcCHHHHHHHHHhhcccCCCcccc
Confidence            99999999999999999999999999999999999875      1         1478999999999999999864  79


Q ss_pred             eEEeCCcc---cCCCCceEe---cEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          403 TLECGGDR---LGNRGYFVQ---PTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       403 ~v~~gg~~---~~~~g~~i~---PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      ++++||..   ....|+|++   |||+.+++++|+.+.+ +||||++|+.++|.+|||++
T Consensus       291 ~~~~gg~~~~~~~~~G~~~~~~~ptil~~v~~~~~i~~eE~FgPVl~v~~~~~~~eAi~~  350 (429)
T cd07121         291 KKWVGKDASKILKAAGIEVPADIRLIIVETDKDHPFVVEEQMMPILPVVRVKNFDEAIEL  350 (429)
T ss_pred             ccccCcCHHHHHHHcCCCCCCCCeEEEEecCCCCCccccccccceEEEEEeCCHHHHHHH
Confidence            99999853   112478887   4999999999977754 99999999999999999975

Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source.

>cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like

Probab=100.00  E-value=7e-64  Score=512.16  Aligned_cols=335  Identities=21%  Similarity=0.243  Sum_probs=299.0

Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhccHHHHHH-HHHHHHHhhhH
Q 012806           97 IDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVR-LLHYYAGWADK  175 (456)
Q Consensus        97 v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~-~l~~~~~~~~~  175 (456)
                      ++.++++|++||+  .|+++|.++|.++|+++++.|+++.++|++++++|+|||+.+++..|+..+++ .++|+++.  +
T Consensus         1 ~~~av~~A~~A~~--~W~~~~~~eR~~~L~~~a~~l~~~~eela~~~~~E~Gk~~~ea~~~e~~~~~~~~~~~~~~~--~   76 (436)
T cd07122           1 VDELVERARKAQR--EFATFSQEQVDKIVEAVAWAAADAAEELAKMAVEETGMGVVEDKVIKNHFASEYVYNDIKDM--K   76 (436)
T ss_pred             ChHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhcC--c
Confidence            4789999999999  89999999999999999999999999999999999999999987447888887 78888763  2


Q ss_pred             hcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHH----HcCCC
Q 012806          176 IHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFH----EAGLP  251 (456)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~----~aGlP  251 (456)
                      ..+.. ..+.+...++.++|+|||++|+|||||+...+|++++||++||+||+|||+.+|+++..++++++    ++|+|
T Consensus        77 ~~g~~-~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~~l~eaG~P  155 (436)
T cd07122          77 TVGVI-EEDEEKGIVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAGAP  155 (436)
T ss_pred             ceeee-ccCCCCCeEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHHHHHHHHHcCCC
Confidence            22221 22224456888999999999999999999999999999999999999999999999999888865    78999


Q ss_pred             CCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHh
Q 012806          252 PGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFAL  331 (456)
Q Consensus       252 ~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~  331 (456)
                      +|++++++|.+.+.+..|.+|++|++|+||||+++++    .+++ +++|+++|+|||+|+||++|||+|.|++.+++++
T Consensus       156 ~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~v~~----~a~~-~~~~~~~elgG~~p~iV~~dADl~~A~~~i~~~~  230 (436)
T cd07122         156 EGLIQWIEEPSIELTQELMKHPDVDLILATGGPGMVK----AAYS-SGKPAIGVGPGNVPAYIDETADIKRAVKDIILSK  230 (436)
T ss_pred             chhEEEecCCChHHHHHHHcCCCcCEEEEcCCHHHHH----HHHh-cCCCEEEecCCCCeEEEcCCCCHHHHHHHHHHHh
Confidence            9999999997778899999999999999999998764    3444 7899999999999999999999999999999999


Q ss_pred             hhcCCCccccCcccccccccHHHHHHHHHHHHhhh-------hcCCC-CCCCCccCCCCCHHHHHHHHHHHHHHHHcCCe
Q 012806          332 FYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRR-------IVGDP-FKSGVEQGPQIDPEQFQKVLRYIRSGIESNAT  403 (456)
Q Consensus       332 ~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~-------~~g~p-~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~  403 (456)
                      |.|+||.|++++|||||+++||+|+++|+++...+       ++|++ .+.++.+||+++..+++++..+++.++.+|++
T Consensus       231 f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~ga~  310 (436)
T cd07122         231 TFDNGTICASEQSVIVDDEIYDEVRAELKRRGAYFLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAELAGIEVPEDTK  310 (436)
T ss_pred             hccCCCCCCCCCEEEEechhHHHHHHHHHHhcceecCHHHHHHHHHHhhcCCCCcCccccCcCHHHHHHHcCCCCCCCCe
Confidence            99999999999999999999999999999999877       89998 46788999999999999998888888888888


Q ss_pred             EEeCCcccCCCCceEecEEEecCCCChHhhhccccceEEeEEEccccccccc
Q 012806          404 LECGGDRLGNRGYFVQPTVFSDVTVSFISLLQFLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       404 v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~~fgPv~~vv~~~~~~eai~~  455 (456)
                      +++|+              +.+++++|+...|.||||++|+.++|.+|||++
T Consensus       311 vl~~~--------------~~~v~~~~~~~~E~FGPVl~v~~~~~~~eAi~~  348 (436)
T cd07122         311 VLVAE--------------ETGVGPEEPLSREKLSPVLAFYRAEDFEEALEK  348 (436)
T ss_pred             EEEEe--------------cCCCCCCCcchhcccCCeEEEEEeCCHHHHHHH
Confidence            87665              458889996555699999999999999999975

Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway.

>TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating)

Probab=100.00  E-value=1.6e-62  Score=509.75  Aligned_cols=342  Identities=18%  Similarity=0.157  Sum_probs=301.3

Q ss_pred             cCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHH
Q 012806           91 EGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYA  170 (456)
Q Consensus        91 ~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~  170 (456)
                      ..+.+|++.++++|++||+  .|+.++.++|.++|+++++.|.+++++|++++++|+||+..+.+..+.......+.+++
T Consensus         4 ~~~~~~v~~av~~A~~A~~--~w~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~~~~~~~~~~~~~~~~   81 (488)
T TIGR02518         4 LYSIQQVRNLIRSAKVAQK--KLANMTQEQIDKIVKAIVDAAYENAVKLAKMANEETGFGKWEDKVIKNVFAATIVYDSI   81 (488)
T ss_pred             ccCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHH
Confidence            3578899999999999999  99999999999999999999999999999999999999988765323344555555555


Q ss_pred             HhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHH----HHHH
Q 012806          171 GWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVA----KLFH  246 (456)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~----~ll~  246 (456)
                      ..... .+. ...+.+...+..++|+|||++|+|||||+.++.+++++||++||+||+|||+.+|.++..++    +++.
T Consensus        82 ~~~~~-~G~-~~~~~~~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~~l~~~l~  159 (488)
T TIGR02518        82 KDMKT-IGI-LSEDKEKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKAAE  159 (488)
T ss_pred             hhCcc-cce-ecCCCCcceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHHHHHHHHH
Confidence            43322 232 22233455788899999999999999999999999999999999999999999999999854    4557


Q ss_pred             HcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEEcCCCCHHHHHHH
Q 012806          247 EAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVEL  326 (456)
Q Consensus       247 ~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~  326 (456)
                      ++|+|+|++|++++.+.+.+..|+.|++||+|.||||+..++.    ++. +++|+++|+|||+|+||++|||+|.|++.
T Consensus       160 eaGlP~gvv~~v~g~~~e~~~~L~~~~~vd~V~fTGs~~v~~~----a~~-~~~pv~~e~gGn~p~iV~~dADld~Aa~~  234 (488)
T TIGR02518       160 EAGAPEGAIGCITVPTIEGTNELMKNKDTSLILATGGEAMVKA----AYS-SGTPAIGVGPGNGPAYIERTANVKKAVRD  234 (488)
T ss_pred             HcCcCcccEEEEcCCCHHHHHHHHhCCCcCEEEEeCCHHHHHH----HHH-cCCCEEEEcCCCCeEEEeCCCCHHHHHHH
Confidence            8999999999999977889999999999999999999986544    333 68999999999999999999999999999


Q ss_pred             HHHHhhhcCCCccccCcccccccccHHHHHHHHHHH-------HhhhhcCCC-CCCCCccCCCCCHHHHHHHHHHHHHHH
Q 012806          327 AHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKAR-------AMRRIVGDP-FKSGVEQGPQIDPEQFQKVLRYIRSGI  398 (456)
Q Consensus       327 i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~-------~~~~~~g~p-~~~~~~~Gpli~~~~~~~v~~~i~~a~  398 (456)
                      ++.++|+|+||.|++.+|+|||+++||+|+++|+++       .+.+++|+| +++++++||+++.++++++.++++.++
T Consensus       235 iv~sk~~~~Gq~C~a~~rllV~~~i~d~f~~~L~~~g~~~~~~~~~~~vg~~~~~~~~~~gp~i~~~~~~~i~~~i~~av  314 (488)
T TIGR02518       235 IIDSKTFDNGTICASEQSIIVEECNKDAVVEELKKQGGYFLTAEEAEKLGKFILRPNGTMNPQIVGKSPQVIANLAGLTV  314 (488)
T ss_pred             HHHHHhcCCCCCCCCCCEEEEeHHHHHHHHHHHHHhhhhhcCHHHHHhhcccccCCCCCcCcccccchHHHHHHHhcccc
Confidence            999999999999999999999999999999999998       899999996 678899999999999999999999999


Q ss_pred             HcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhccccceEEeEEEccccccccc
Q 012806          399 ESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQFLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       399 ~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~~fgPv~~vv~~~~~~eai~~  455 (456)
                      .+|+++++||..              .++++|+...|+||||++|+.+++.+|||++
T Consensus       315 ~~gakll~gg~~--------------~v~~~~~~~~E~fgPVl~v~~~~~~dEAI~~  357 (488)
T TIGR02518       315 PEDAKVLIGEQN--------------GVGNKNPYSREKLTTILAFYTEENWHEACEL  357 (488)
T ss_pred             CCCCEEEEeCCC--------------CCCCCCccccCccCceEEEEEeCCHHHHHHH
Confidence            999999999853              3677785433599999999999999999975

>PRK15398 aldehyde dehydrogenase EutE; Provisional

Probab=100.00  E-value=1.2e-62  Score=507.88  Aligned_cols=335  Identities=19%  Similarity=0.215  Sum_probs=290.5

Q ss_pred             cCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHH
Q 012806           91 EGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYA  170 (456)
Q Consensus        91 ~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~  170 (456)
                      ....+|++.+++.|++||.  .|+.++.++|.++|+++++.|+++.++|++++++|+||+..+++.       ..+++++
T Consensus        32 ~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~la~~l~~~~~ela~~~~~E~Gk~~~ea~~-------~~~~~~~  102 (465)
T PRK15398         32 MGVFASVDDAVAAAKVAQQ--RYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGRVEDKI-------AKNVAAA  102 (465)
T ss_pred             ccHHHHHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHH-------HHHHHHH
Confidence            4578999999999999999  999999999999999999999999999999999999999887652       3345554


Q ss_pred             HhhhH---hcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHH-
Q 012806          171 GWADK---IHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFH-  246 (456)
Q Consensus       171 ~~~~~---~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~-  246 (456)
                      .....   ........ .+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..++++++ 
T Consensus       103 ~~~~~~~~~~~~~~~~-~~~~~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~~ll~~  181 (465)
T PRK15398        103 EKTPGVEDLTTEALTG-DNGLTLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLNE  181 (465)
T ss_pred             HHhccccccccCcccC-CCceeEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHHHHHHH
Confidence            43311   11111111 12346788899999999999999999999999999999999999999999999999999886 


Q ss_pred             ---HcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEEcCCCCHHHH
Q 012806          247 ---EAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQA  323 (456)
Q Consensus       247 ---~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~~daD~d~a  323 (456)
                         ++|+|+|+++++++.+.+.++.|++|++||.|+||||+.+|+.|.+     .++|+++|+|||+|+||++|||+|.|
T Consensus       182 ~l~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGS~~~G~~v~~-----~~k~~~~elGGk~p~IV~~dADld~A  256 (465)
T PRK15398        182 AIVAAGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVVKAAMK-----SGKKAIGAGAGNPPVVVDETADIEKA  256 (465)
T ss_pred             HHHHcCCCCCeEEEecCCCHHHHHHHHcCCCccEEEeeCCHHHHHHHHH-----cCCceeeecCCCceEEEecCCCHHHH
Confidence               6899999999999877778899999999999999999999999987     35899999999999999999999999


Q ss_pred             HHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCe
Q 012806          324 VELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNAT  403 (456)
Q Consensus       324 a~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~  403 (456)
                      ++.+++++|.|+||.|++++|||||+++||+|+++|+++      +         +|++++++++++.++++++.+++++
T Consensus       257 a~~i~~g~~~n~GQ~C~A~~rvlV~~si~d~f~~~l~~~------~---------~~li~~~~~~~v~~~l~~~~~~~~~  321 (465)
T PRK15398        257 ARDIVKGASFDNNLPCIAEKEVIVVDSVADELMRLMEKN------G---------AVLLTAEQAEKLQKVVLKNGGTVNK  321 (465)
T ss_pred             HHHHHHhcccCCCCcCCCCceEEEeHHHHHHHHHHHHHc------C---------CccCCHHHHHHHHHHHhhcccccch
Confidence            999999999999999999999999999999999999875      1         2789999999999999965445667


Q ss_pred             EEeCCcc---cCCCCceE---ecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          404 LECGGDR---LGNRGYFV---QPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       404 v~~gg~~---~~~~g~~i---~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      ++.||..   ....|+|+   +|||+.+++++|+.+.+ +||||++|+.|+|.+|||++
T Consensus       322 ~~~g~~~~~i~~~~G~~~~~~~~tvl~~v~~d~~i~~eE~FGPVl~V~~~~d~deAi~~  380 (465)
T PRK15398        322 KWVGKDAAKILEAAGINVPKDTRLLIVETDANHPFVVTELMMPVLPVVRVKDVDEAIAL  380 (465)
T ss_pred             hhhCCCHHHHHHhCCCCCCCCCCEEEecCCCCCchhcccccCceEEEEEeCCHHHHHHH
Confidence            7777642   12246666   48999999999976665 99999999999999999975

>KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=5.9e-61  Score=459.11  Aligned_cols=347  Identities=26%  Similarity=0.360  Sum_probs=312.4

Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHh
Q 012806           97 IDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKI  176 (456)
Q Consensus        97 v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~  176 (456)
                      +++.++.+|.+|.+|  +.-+.+.|.+.|.++...+++|.+++.+++..|.+|+..++...|+...++.++|+....+..
T Consensus         4 ~~~~v~~~R~~F~sG--rtr~~efR~~QL~~L~r~i~e~e~~i~~Al~~DL~k~~~es~~~Ev~~~~~~i~~~l~~L~~w   81 (477)
T KOG2456|consen    4 ISETVRRLRLAFSSG--RTRPLEFRKQQLEALYRMIQENEKEIIEALAADLHKPELESYLNEVGYVLNEIRYALENLPEW   81 (477)
T ss_pred             HHHHHHHHHHHHhcC--CcCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhHHh
Confidence            456699999999966  788999999999999999999999999999999999999998889999999999888766554


Q ss_pred             cCcccC----CCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCC
Q 012806          177 HGLTVP----GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPP  252 (456)
Q Consensus       177 ~~~~~~----~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~  252 (456)
                      ......    ..-....+.+.+|+|||++|+|||||+.+.+.++++||+|||+||+|||+.+|.++..|++++-+. ++.
T Consensus        82 v~~~~v~~~~~t~~dk~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakllp~Y-ld~  160 (477)
T KOG2456|consen   82 VKPEPVKKSFLTFLDKAYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKLLPQY-LDQ  160 (477)
T ss_pred             ccccccCcccccccCceeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHHHHHh-cCc
Confidence            332211    112346789999999999999999999999999999999999999999999999999999999999 999


Q ss_pred             CcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhh
Q 012806          253 GVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALF  332 (456)
Q Consensus       253 g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~  332 (456)
                      +.+.||.|.-++. ..|+.| ++|.|+||||+.+|+.|+.++++ |++||++|||||+|++|++|+|++-+++.|.+++|
T Consensus       161 ~~~~VV~Ggv~ET-t~LL~~-rfD~IfyTGsp~VgkIim~aAaK-hLTPvtLELGGKsP~~vd~~~d~~ia~~RI~~gk~  237 (477)
T KOG2456|consen  161 DLIRVVNGGVPET-TELLKQ-RFDHIFYTGSPRVGKIIMAAAAK-HLTPVTLELGGKSPCYVDKNCDLKIAARRIAWGKW  237 (477)
T ss_pred             ceEEEecCCCchH-HHHHHh-hccEEEecCCchHHHHHHHHHHh-cCCcEEEEcCCCCCeeecCCcCHHHHHHHHHHHhh
Confidence            9999999955554 455554 99999999999999999999999 99999999999999999999999999999999999


Q ss_pred             hcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccC
Q 012806          333 YNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG  412 (456)
Q Consensus       333 ~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~  412 (456)
                      .|+||.|.++++|+++.+++.+++++++..+++.- |...+++.+++.+|+..+++|+.++++.-    .+++.||..+ 
T Consensus       238 ~N~GQtCvapDYiL~~k~~~~kli~alk~~l~eFY-G~n~~eS~d~sRiIn~~hf~Rl~~ll~~~----~kv~~Gg~~d-  311 (477)
T KOG2456|consen  238 MNSGQTCVAPDYILCSKSIQPKLIDALKSTLKEFY-GENPKESKDLSRIINQRHFQRLSALLDET----GKVAIGGESD-  311 (477)
T ss_pred             ccCCCeeccCCeEEecHhhhHHHHHHHHHHHHHHh-CCCccccccHHHHhhHHHHHHHHHHhcCC----CceecCCccc-
Confidence            99999999999999999999999999999999876 66667889999999999999999988642    5889999864 


Q ss_pred             CCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          413 NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       413 ~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      ....||.|||+.||+++.+.+.| +||||++|+.+++.+|+|+.
T Consensus       312 ~~d~~I~PTIL~DV~~~~p~M~eEIFGPiLPIi~v~~l~Eai~~  355 (477)
T KOG2456|consen  312 ESDRYIAPTILLDVPEDSPVMQEEIFGPILPIITVQSLDEAINF  355 (477)
T ss_pred             hhhcccCCeEEecCCCCChhhhhhhccCccceeEhhhHHHHHHH
Confidence            34679999999999999977776 99999999999999999875

>KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism]

Probab=100.00  E-value=7.2e-60  Score=453.98  Aligned_cols=391  Identities=25%  Similarity=0.351  Sum_probs=358.3

Q ss_pred             CCccCceeCCEEeeCCCCCeeeeecCCC-CceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 012806           55 ISYTKNLINGQFVDAASGKTFPVYDPRT-AEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIE  133 (456)
Q Consensus        55 ~~~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~  133 (456)
                      +..++..|||+.+...  ......+|++ +.+++++..++.++++.||++|.+|++  .|..+|..+|.+|++|+|+++.
T Consensus        57 ~~evP~vIg~~~v~t~--~~q~q~~P~~hq~~lA~~~yA~~k~ie~AIkaAl~a~~--~W~~~PiadR~aI~lkAAdlis  132 (561)
T KOG2455|consen   57 PLEVPLVIGDKEVYTN--DEQYQVCPHNHQHVLAKVYYATKKQIEKAIKAALSAQK--TWELVPIADRLAIFLKAADLIS  132 (561)
T ss_pred             ceeccEEECCeeeecC--CcccccCCchhhhhhhheeeccHHHHHHHHHHHHhhcC--ccccCcHHHHHHHHHHHHHHhc
Confidence            4556899999998743  4577889988 679999999999999999999999999  9999999999999999999997


Q ss_pred             -HhHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCC-CCCcceEEEeecc-ceEEEEccCCchHH
Q 012806          134 -KNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEPI-GVAGQIVPWNFPLL  210 (456)
Q Consensus       134 -~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~-Gvv~~i~p~N~P~~  210 (456)
                       +++-+|....+.-.||...||..+-+.+.++++|+.+..+..+....... ..+..+...++|+ |.|+.|+||||-..
T Consensus       133 tkyr~~l~aatMlgqgKt~~qAeiDa~~eLidf~R~na~ya~eL~~~qpi~~~~~t~ns~~yRpleGFVaAisPFnftAI  212 (561)
T KOG2455|consen  133 TKYRYDLLAATMLGQGKTAIQAEIDAAAELIDFFRFNAKYASELYAQQPISQTKGTWNSMEYRPLEGFVAAISPFNFTAI  212 (561)
T ss_pred             chHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHhHHHHHHhhhcCCccccCCCCcceeeccccceeEEecccceeee
Confidence             78888888889999999999876557888999999999888877655443 4456677788888 99999999999999


Q ss_pred             HHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHH
Q 012806          211 LFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIV  290 (456)
Q Consensus       211 ~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i  290 (456)
                      ......+||| |||+|++|||..+.+++..+.++|+|||||+|++|+|+++++..++.+.+++++.++-||||+.+-+.+
T Consensus       213 ~gnLa~aPaL-MGN~VLwkPS~ta~lssYii~~il~EAGlP~GvinFvPad~~~f~dtita~~hfaglnftgS~~~fk~l  291 (561)
T KOG2455|consen  213 GGNLAGAPAL-MGNVVLWKPSDTAALSSYIIYRILREAGLPPGVINFVPADGPLFGDTITASPHFAGLNFTGSVPTFKHL  291 (561)
T ss_pred             ccccccChhh-hcceeeecccchhHHHHHHHHHHHHHcCCCccceeeccCCCCeecceeccCcccceeeeecccHHHHHH
Confidence            9999999999 699999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhh-----CCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhh
Q 012806          291 QELAAK-----SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMR  365 (456)
Q Consensus       291 ~~~~a~-----~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~  365 (456)
                      .++.++     ..+.+++.|.||||..+|++.||++.++...++++|-.+||.|++.+|+||+++.++.+.++|.+..++
T Consensus       292 wk~V~~n~~~Y~~fPrlvgEcgGkNFHfVH~SA~VesvV~~TvrsAfey~GQkcsA~SRmYvp~s~wp~i~e~l~~~~~q  371 (561)
T KOG2455|consen  292 WKKVGENVDNYRTFPRLVGECGGKNFHFVHASADVESVVSSTVRSAFEYQGQKCSACSRMYVPESLWPQIREELVEEHSQ  371 (561)
T ss_pred             HHHHHhhhhhhhcchhhhccCCCcceEEeccccchHHHHHHHHHHHHhhcccccchhhhcccchhhcHHHHHHHHHHHhh
Confidence            888876     235899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcCCC-CCCCCccCCCCCHHHHHHHHHHHHHHHHc-CCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEE
Q 012806          366 RIVGDP-FKSGVEQGPQIDPEQFQKVLRYIRSGIES-NATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFS  442 (456)
Q Consensus       366 ~~~g~p-~~~~~~~Gpli~~~~~~~v~~~i~~a~~~-Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~  442 (456)
                      +++||| .|.++.+||+|+...|.|+.++|+.++.. ..++++||+.+++.|+|++|||+..-+|..+++.| +||||++
T Consensus       372 ~~igd~~~d~~~f~gavIh~~sF~rl~k~le~ak~~~~leiL~GGk~DdS~G~FV~PTiv~~kdP~~pim~ee~fGPvLs  451 (561)
T KOG2455|consen  372 LKIGDPVIDFSTFIGAVIHDKSFARLKKVLEHAKKDPELEILAGGKCDDSTGYFVEPTIVLSKDPKDPIMTEEIFGPVLS  451 (561)
T ss_pred             cccCCccccccchhhhhccHHHHHHHHHHHHhhccCccceeeecCcccCCCCeeecceEEEccCCCcchhhhhccCceeE
Confidence            999998 77899999999999999999999999764 47899999999999999999999999999977776 9999999


Q ss_pred             eEEEcccc
Q 012806          443 FIILCVVT  450 (456)
Q Consensus       443 vv~~~~~~  450 (456)
                      |.-|.|.+
T Consensus       452 VyvY~Dd~  459 (561)
T KOG2455|consen  452 VYVYEDDK  459 (561)
T ss_pred             EEEecccc
Confidence            99998865

>PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-58  Score=510.02  Aligned_cols=343  Identities=20%  Similarity=0.231  Sum_probs=295.5

Q ss_pred             EecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHH
Q 012806           89 VAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHY  168 (456)
Q Consensus        89 v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~  168 (456)
                      +...+.+|++++|++|++||+  .|++++.++|.++|+++++.|++++++|++++++|+|||..+++..++..+++.+++
T Consensus         6 ~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~EtGk~~~e~~~~~~~~~~~~~~~   83 (862)
T PRK13805          6 MAVTNVAELDALVEKAKKAQE--EFATFTQEQVDKIVRAAALAALDARIPLAKMAVEETGRGVVEDKVIKNHFASEYIYN   83 (862)
T ss_pred             cCCCCHHHHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHH
Confidence            456789999999999999999  999999999999999999999999999999999999999988764345445555544


Q ss_pred             HHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHH--
Q 012806          169 YAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFH--  246 (456)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~--  246 (456)
                      +... ++..+. ...+.....+..++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..++++++  
T Consensus        84 ~~~~-~~~~g~-~~~~~~~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~~l~~~~  161 (862)
T PRK13805         84 SYKD-EKTVGV-IEEDDEFGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAAKIVLDA  161 (862)
T ss_pred             HhcC-CCcccc-cCcCCCCCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHHHHHHHH
Confidence            4331 122221 222234457888999999999999999999999999999999999999999999999999998875  


Q ss_pred             --HcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEEcCCCCHHHHH
Q 012806          247 --EAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAV  324 (456)
Q Consensus       247 --~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa  324 (456)
                        ++|+|+|+|++++|.+.+.+..|+.|+++|+|+||||+.+++    .++. +++|+++|+|||+|+||++|||++.|+
T Consensus       162 l~~aG~p~g~v~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v~~----~a~~-~~~pv~~e~gGk~p~iV~~dADl~~Aa  236 (862)
T PRK13805        162 AVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPGMVK----AAYS-SGKPALGVGAGNVPAYIDKTADIKRAV  236 (862)
T ss_pred             HHHcCcCcccEEEecCCCHHHHHHHHcCCCccEEEecCCHHHHH----HHHh-cCCCeEEECCCCCeEEEeCCCCHHHHH
Confidence              689999999999987788899999999999999999998653    4444 789999999999999999999999999


Q ss_pred             HHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeE
Q 012806          325 ELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATL  404 (456)
Q Consensus       325 ~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v  404 (456)
                      +.+++++|+|+||.|++++|||||+++||+|+++|+++      |         +|+++.++++++.++|+++.+.|+..
T Consensus       237 ~~i~~~k~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~------g---------~~l~~~~~~~~v~~~i~~a~~~~~~~  301 (862)
T PRK13805        237 NDILLSKTFDNGMICASEQAVIVDDEIYDEVKEEFASH------G---------AYFLNKKELKKLEKFIFGKENGALNA  301 (862)
T ss_pred             HHHHHhhhccCCCccCCCceEEEehhhHHHHHHHHHHh------C---------CeeCCHHHHHHHHHHHhhccCCCcCc
Confidence            99999999999999999999999999999999998876      1         58999999999999999887666543


Q ss_pred             -EeCCccc---CCCCceEecEE------EecCCCChHhhhccccceEEeEEEccccccccc
Q 012806          405 -ECGGDRL---GNRGYFVQPTV------FSDVTVSFISLLQFLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       405 -~~gg~~~---~~~g~~i~PtV------l~~v~~~~~~~~~~fgPv~~vv~~~~~~eai~~  455 (456)
                       ++||...   ...|+|++||+      +.+++++|+...|+||||++|+.+++.+|||++
T Consensus       302 ~~~g~~~~~~~~~~G~~~~p~~~~~i~~l~~v~~~~~~~~E~fgPVl~v~~~~~~deAi~~  362 (862)
T PRK13805        302 DIVGQSAYKIAEMAGFKVPEDTKILIAEVKGVGESEPLSHEKLSPVLAMYKAKDFEDAVEK  362 (862)
T ss_pred             cccCCCHHHHHHHcCCCCCCCCeEEEEecCCCCCCCcchhcccCcEEEEEEECCHHHHHHH
Confidence             4566421   12488999997      778999997666799999999999999999975

>KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=1.4e-58  Score=431.35  Aligned_cols=387  Identities=29%  Similarity=0.509  Sum_probs=361.3

Q ss_pred             eeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHH
Q 012806           61 LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELA  140 (456)
Q Consensus        61 ~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la  140 (456)
                      ..+|+|  ..+|+.+..++|++.++|+.|..++.+|-+.+++.+++|.+  .|-..+...|.++.+++.|.|....+.|-
T Consensus        23 vy~gkw--~a~g~vv~t~~pann~pia~v~~asv~dye~~~k~a~ea~k--iw~~vpapkrgeivrqigdalr~klq~lg   98 (507)
T KOG2453|consen   23 VYHGKW--AASGQVVQTFAPANNSPIANVQNASVQDYEIAIKEAKEAYK--IWCEVPAPKRGEIVRQIGDALRTKLQNLG   98 (507)
T ss_pred             eeeeee--ccCCceeEeecCCCCChhHHHhhccHHHHHHHHHHHHHHHH--HHhcCCCCccchHHHHHHHHHHHHHHHHh
Confidence            456799  67899999999999999999999999999999999999999  99999999999999999999999999999


Q ss_pred             HHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCC-CcceEEEeeccceEEEEccCCchHHHHHhHHHHH
Q 012806          141 ALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDG-NYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPA  219 (456)
Q Consensus       141 ~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~A  219 (456)
                      +++++|+||-..+.. +|+...++.++|..+..+.+.+..+|... ++.....|.|+|+|++|+.||||....-|.-..|
T Consensus        99 ~lvslemgkilaegv-gevqeyvdicdyavglsr~l~g~i~pserpghalleqwnplg~vgvitafnfpcavygwnnaia  177 (507)
T KOG2453|consen   99 KLVSLEMGKILAEGV-GEVQEYVDICDYAVGLSRSLEGKIFPSERPGHALLEQWNPLGVVGVITAFNFPCAVYGWNNAIA  177 (507)
T ss_pred             hhhhhhhhhHhhhcc-hhHHHHHHHHHHhhhhhhhhCCcccCCCCCchhHHHhcCCcceEEEEEeccCCceeeccCchhh
Confidence            999999999998886 79999999999999999999998888654 5556778999999999999999999999999999


Q ss_pred             hhcCCEEEEecCCCchHHHHHHHHHH----HHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHh
Q 012806          220 LTCGNTIVLKSAEQTPLTALYVAKLF----HEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA  295 (456)
Q Consensus       220 LaaGN~vvlKps~~~p~~~~~l~~ll----~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a  295 (456)
                      +.+||+|++||++.+|+++..+.+++    .+--+|++......| +.+.+.++..+.+++.+.||||+.+++.+.+...
T Consensus       178 Mv~gncVvWKpApttpLtTiAvtklIaevL~qnnl~~aicsltcG-~aDigrAaakdgRvnlvsftGssQvgKsvgq~vq  256 (507)
T KOG2453|consen  178 MVCGNCVVWKPAPTTPLTTIAVTKLIAEVLEQNNLPGAICSLTCG-GADIGRAAAKDGRVNLVSFTGSSQVGKSVGQQVQ  256 (507)
T ss_pred             hhhcceeEecCCCCcceeHHHHHHHHHHHHhccCCCcceeeeccc-chhhhhhccccCceeecccccchhhhhHHHHHHH
Confidence            99999999999999998887665554    444699998998888 7789999999999999999999999999998887


Q ss_pred             hCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCC
Q 012806          296 KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG  375 (456)
Q Consensus       296 ~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~  375 (456)
                      . ++.+.++|+||+|++||.+|||+..++...++++...+||.|+..+|+++|+++||+.+++|++..+++++|+|+|++
T Consensus       257 a-rfgk~llelggnnaiiv~edadl~lvvps~lfaavgtagqrctt~rrl~~hesvyd~vlerlkkayaq~~ignpld~n  335 (507)
T KOG2453|consen  257 A-RFGKLLLELGGNNAIIVNEDADLNLVVPSTLFAAVGTAGQRCTTTRRLIVHESVYDQVLERLKKAYAQFEIGNPLDSN  335 (507)
T ss_pred             H-HhhhHHHhhcCCceEEEeccccceeeehHHHHHHhcccccchhhhhHHHhhHHHHHHHHHHHHHHHHheecCCcCCCC
Confidence            7 667889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEcccccccc
Q 012806          376 VEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTS  454 (456)
Q Consensus       376 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~  454 (456)
                      +-+||+.++++..+...-|+.++++|.++++||+..+..|+|++|||++ +.+|.+.+.+ .|+||+.|.++++.+|++.
T Consensus       336 tl~gplht~qav~~f~~~veeak~~ggki~yggkv~er~gnfveptivt-l~hda~vv~~etfapilyvlkf~~~eea~a  414 (507)
T KOG2453|consen  336 TLIGPLHTQQAVGKFKASVEEAKASGGKIEYGGKVLERDGNFVEPTIVT-LKHDAPVVLRETFAPILYVLKFSTLEEAIA  414 (507)
T ss_pred             ceeccccCHHHHHHHHHHHHHHHhcCCeEEECCEeeccCCCcccceEEE-ecCCcchhhhhhccceeeEEeccchhhhhe
Confidence            9999999999999999999999999999999999888899999999997 8888866664 9999999999999999986


Q ss_pred             c
Q 012806          455 I  455 (456)
Q Consensus       455 ~  455 (456)
                      +
T Consensus       415 i  415 (507)
T KOG2453|consen  415 I  415 (507)
T ss_pred             e
Confidence            5

>cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19

Probab=100.00  E-value=6.6e-57  Score=459.58  Aligned_cols=305  Identities=18%  Similarity=0.228  Sum_probs=262.8

Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChh----hhh-------hccHHHHHHHHH
Q 012806           99 RAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYV----QSL-------KSEVPMVVRLLH  167 (456)
Q Consensus        99 ~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~----~a~-------~~ev~~~~~~l~  167 (456)
                      ..++.|++||+  .|+.+|.++|.++|.++++.|.+++++|++++++|+||+..    ++.       ..|+..+++.++
T Consensus         2 ~~~~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~~~~   79 (406)
T cd07079           2 ELAKRAKAASR--ALATLSTEQKNAALLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLR   79 (406)
T ss_pred             hHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHHHHH
Confidence            56888999999  99999999999999999999999999999999777666643    222       148999999999


Q ss_pred             HHHHhhhHhcCcccCC---CCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHH
Q 012806          168 YYAGWADKIHGLTVPG---DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKL  244 (456)
Q Consensus       168 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l  244 (456)
                      +++...+. .+...+.   +.+...+++++|+|||++|+|| +| ...++++++||++||+||+|||+.+|+++..++++
T Consensus        80 ~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~  156 (406)
T cd07079          80 QVAALPDP-VGEVLRGWTLPNGLQIEKVRVPLGVIGIIYES-RP-NVTVDAAALCLKSGNAVILRGGSEALHSNRALVEI  156 (406)
T ss_pred             HHHhcCCC-CcccccceeccCccceeEEecceEEEEEecCC-Cc-chHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHH
Confidence            99876542 2332221   2234567889999999999996 56 67889999999999999999999999999999999


Q ss_pred             HH----HcCCCCCcEEEEeCCch-hhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEEcCCCC
Q 012806          245 FH----EAGLPPGVLNVVSGYGP-TAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDAD  319 (456)
Q Consensus       245 l~----~aGlP~g~v~vv~g~~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~~daD  319 (456)
                      ++    ++|+|+|++|+++|.+. +.+..|..|+++|+|+||||+.+|+.|.+.+    ++|+++|+|||+|+||++|||
T Consensus       157 ~~~~l~~aG~P~gvv~~v~g~~~~~~~~~l~~~~~v~~i~fTGS~~~G~~i~~~a----~~pv~lELGGk~p~IV~~dAD  232 (406)
T cd07079         157 IQEALEEAGLPEDAVQLIPDTDREAVQELLKLDDYIDLIIPRGGAGLIRFVVENA----TIPVIKHGDGNCHVYVDESAD  232 (406)
T ss_pred             HHHHHHHcCCCcccEEEecCCChHHHHHHHcCCCCccEEEeCCCHHHHHHHHHhc----CCCEEeecCCcceEEEeCCCC
Confidence            87    89999999999998554 6788899999999999999999999998765    589999999999999999999


Q ss_pred             HHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHHHHH
Q 012806          320 VDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIE  399 (456)
Q Consensus       320 ~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~  399 (456)
                      +|.|++.+++++|.|+| .|++++|||||+++||+|+++|++++++                                  
T Consensus       233 l~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~si~d~f~~~l~~~~~~----------------------------------  277 (406)
T cd07079         233 LEMAVRIVVNAKTQRPS-VCNALETLLVHRDIAEEFLPKLAEALRE----------------------------------  277 (406)
T ss_pred             HHHHHHHHHHcccCCCc-ccccceeEEEeHHHHHHHHHHHHHHHHH----------------------------------
Confidence            99999999999999999 9999999999999999999999998775                                  


Q ss_pred             cCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          400 SNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       400 ~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      .|++++ ||...   ..|++||    ++++|+++.+ +||||++|+.++|.+|||++
T Consensus       278 ~ga~~~-~g~~~---~~~~~pt----v~~d~~i~~eE~FGPVl~v~~~~~~deAi~~  326 (406)
T cd07079         278 AGVELR-GDEET---LAILPGA----KPATEEDWGTEYLDLILAVKVVDSLDEAIAH  326 (406)
T ss_pred             CCCEEe-cCHHH---HHhcccc----cCCCcchhhhhhhCceeEEEEeCCHHHHHHH
Confidence            256655 43321   1388898    8899977775 99999999999999999975

Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1).

>PRK00197 proA gamma-glutamyl phosphate reductase; Provisional

Probab=100.00  E-value=1.6e-56  Score=458.36  Aligned_cols=310  Identities=21%  Similarity=0.261  Sum_probs=265.5

Q ss_pred             HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChh----hhhh-------ccHHHH
Q 012806           94 AEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYV----QSLK-------SEVPMV  162 (456)
Q Consensus        94 ~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~----~a~~-------~ev~~~  162 (456)
                      .+|++++++.|++||+  .|+.+|..+|.++|+++++.|++|+++|++++++|+||+..    ++..       .|+..+
T Consensus         3 ~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev~~~   80 (417)
T PRK00197          3 MEYLEELGRRAKAASR--KLAQLSTAQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGI   80 (417)
T ss_pred             hhHHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHHHHH
Confidence            3689999999999999  89999999999999999999999999999999988877642    3321       488899


Q ss_pred             HHHHHHHHHhhhHhcCcccCC---CCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHH
Q 012806          163 VRLLHYYAGWADKIHGLTVPG---DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL  239 (456)
Q Consensus       163 ~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~  239 (456)
                      ++.++|++.+.+.. +...+.   +.+...++.++|+|||++|+||| | ..+++++++||++||+||+|||+.+|.++.
T Consensus        81 ~~~~~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~p-~-~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~  157 (417)
T PRK00197         81 AEGLRQVAALPDPV-GEVLDGWTLPNGLRIGRVRVPLGVIGVIYESR-P-NVTVDAAALCLKSGNAVILRGGSEAIHSNR  157 (417)
T ss_pred             HHHHHHHhhcCCCc-cccccceecCCCceEEEEecCceEEEEEcCCC-c-hHHHHHHHHHHHhCCeEEEecChhhhHHHH
Confidence            99999999876543 333322   22335788999999999999986 4 678999999999999999999999999999


Q ss_pred             HHHHHH----HHcCCCCCcEEEEeCCc-hhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEE
Q 012806          240 YVAKLF----HEAGLPPGVLNVVSGYG-PTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFII  314 (456)
Q Consensus       240 ~l~~ll----~~aGlP~g~v~vv~g~~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV  314 (456)
                      .+++++    .++|+|+|++|+++|.+ .+.+..|..|+++|+|+||||+.+|+.+.+.+    ++|+++|+|||+|+||
T Consensus       158 ~l~~l~~~~l~~aGlP~gv~~~v~g~~~~~~~~~l~~~~~v~~V~fTGS~~~g~~i~~~a----~~~~~lELGGk~p~IV  233 (417)
T PRK00197        158 ALVAVIQEALEEAGLPADAVQLVETTDRAAVGELLKLDGYVDVIIPRGGAGLIRRVVENA----TVPVIEHGDGICHIYV  233 (417)
T ss_pred             HHHHHHHHHHHHcCcChhhEEEecCCChHHHHHHhccCCCccEEEecCCHHHHHHHHHhc----CCCEEeecCCcceEEE
Confidence            998885    68899999999999644 55788899999999999999999999998753    5899999999999999


Q ss_pred             cCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHH
Q 012806          315 FDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYI  394 (456)
Q Consensus       315 ~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i  394 (456)
                      ++|||+|.|++.+++++|.|+| .|++++|+|||+++||+|+++|++.+++++++                         
T Consensus       234 ~~dAdl~~Aa~~iv~~~~~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~-------------------------  287 (417)
T PRK00197        234 DESADLDKALKIVLNAKTQRPS-VCNALETLLVHEAIAEEFLPKLAEALAEAGVE-------------------------  287 (417)
T ss_pred             eCCCCHHHHHHHHHHhccCCCc-ccccceEEEEEHHHhHHHHHHHHHHHHHCCCe-------------------------
Confidence            9999999999999999999999 99999999999999999999999999887532                         


Q ss_pred             HHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          395 RSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       395 ~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                               ++ ||...  .+ |+ |||+   +++|+++.+ +||||++|+.++|.+|||++
T Consensus       288 ---------~~-~~~~~--~~-~~-PTi~---~~~~~i~~eE~FGPVl~v~~~~~~deAi~~  332 (417)
T PRK00197        288 ---------LR-GDEAA--LA-LL-PDVV---PATEEDWDTEYLDLILAVKVVDSLDEAIAH  332 (417)
T ss_pred             ---------Ee-cCHHH--HH-hh-cccc---cCCcchhhhhhhCceEEEEEeCCHHHHHHH
Confidence                     11 11110  12 33 9998   467766665 99999999999999999975

>PLN02418 delta-1-pyrroline-5-carboxylate synthase

Probab=100.00  E-value=7e-55  Score=469.60  Aligned_cols=305  Identities=20%  Similarity=0.221  Sum_probs=268.7

Q ss_pred             HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHH------HHhcC--CChhhhh---hccHHHHH
Q 012806           95 EDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALE------TWNNG--KPYVQSL---KSEVPMVV  163 (456)
Q Consensus        95 ~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~------~~e~G--k~~~~a~---~~ev~~~~  163 (456)
                      .++++++++|++||+  .|+.+|..+|.++|+++++.|+++.++|++++      ++|+|  ||+.++.   ..|+..++
T Consensus       294 ~~~~~~~~aA~~A~~--~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~~~~~ev~~~~  371 (718)
T PLN02418        294 VGAREMAVAARESSR--KLQALSSEERKKILLDVADALEANEELIKAENELDVAAAQEAGYEKSLVSRLTLKPGKIASLA  371 (718)
T ss_pred             HHHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHhCCchhHHHHHhccHHHHHHHH
Confidence            359999999999999  89999999999999999999999999999996      77999  8877763   35999999


Q ss_pred             HHHHHHHHhhhHhcCcccC---CCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHH
Q 012806          164 RLLHYYAGWADKIHGLTVP---GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALY  240 (456)
Q Consensus       164 ~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~  240 (456)
                      ..++||++. .+..+...+   ...+...++.++|+|||++|+||| |+.+. ++++|||++||+||+|||+.+|+++..
T Consensus       372 ~~~~~~a~~-~~~~g~~~~~~~~~~~~~~~~~r~PlGVV~~I~Pwn-P~~~~-~kiapALaaGNtVVlKPse~tp~s~~~  448 (718)
T PLN02418        372 ASIRQLADM-EDPIGRVLKRTEVADGLVLEKTSCPLGVLLIIFESR-PDALV-QIASLAIRSGNGLLLKGGKEAARSNAI  448 (718)
T ss_pred             HHHHHHhcC-ccccCccccccccCCCceEEEEEEeeeEEEEEeCCC-cHHHH-HHHHHHHHhCCEEEEeCCccchHHHHH
Confidence            999999987 344444433   223344688899999999999999 99999 999999999999999999999999999


Q ss_pred             HHHHHHHcCCCCCc----EEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEEcC
Q 012806          241 VAKLFHEAGLPPGV----LNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFD  316 (456)
Q Consensus       241 l~~ll~~aGlP~g~----v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~~  316 (456)
                      |+++++++ +|+|+    +|+|+| +.+.+..|..|++|++|+||||+.   .+.+.++. ++||+++|+|||+|+||++
T Consensus       449 l~~l~~eA-lP~gv~~~v~nvv~g-~~~~g~~L~~~~~v~~V~FTGSt~---~i~~~aa~-~~k~v~lELGGk~p~iV~~  522 (718)
T PLN02418        449 LHKVITDA-IPKTVGGKLIGLVTS-RDEIPDLLKLDDVIDLVIPRGSNK---LVSQIKAS-TKIPVLGHADGICHVYVDK  522 (718)
T ss_pred             HHHHHHHH-ccccCCcceEEEeCC-cHHHHHHHhhCCCCCEEEEeCCHH---HHHHHHHh-cCCCEEEeCCCcceEEEeC
Confidence            99999999 99996    999998 668899999999999999999995   44454555 7899999999999999999


Q ss_pred             CCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHH
Q 012806          317 DADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRS  396 (456)
Q Consensus       317 daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~  396 (456)
                      |||+|.|++.+++++|.| ||.|++.+|+|||+++||+                        |         .+.++|++
T Consensus       523 DADld~A~~~i~~~~~~n-GQ~C~a~~RllVh~~i~d~------------------------G---------~~~~~i~~  568 (718)
T PLN02418        523 SADMDMAKRIVVDAKTDY-PAACNAMETLLVHKDLVQN------------------------G---------GLNDLLVA  568 (718)
T ss_pred             CCCHHHHHHHHHHHhCCC-CCccccCcEEEEecccccc------------------------c---------cHHHHHHH
Confidence            999999999999999999 9999999999999999996                        2         35899999


Q ss_pred             HHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          397 GIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       397 a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      ++++||++ +||++..  |      +|. + ++|+.+.| +|||+++|.++++.+|||++
T Consensus       569 a~~~Ga~l-~Gg~~~~--g------~l~-~-~~~~i~~eE~FgPv~~i~~~~~~dEAI~~  617 (718)
T PLN02418        569 LRSAGVTL-YGGPRAS--K------LLN-I-PEAQSFHHEYSSLACTVEIVDDVHAAIDH  617 (718)
T ss_pred             HHHCCCEE-ECCcccc--C------eeC-C-CCchhhhCCcCCeeEEEEEECCHHHHHHH
Confidence            99999999 6886532  3      343 4 77867765 99999999999999999975

>TIGR00407 proA gamma-glutamyl phosphate reductase

Probab=100.00  E-value=7.6e-55  Score=441.13  Aligned_cols=303  Identities=17%  Similarity=0.203  Sum_probs=256.8

Q ss_pred             HHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHH------HHHhcCCCh------hhhhhccHHHHHHHHHHHHH
Q 012806          104 ARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAAL------ETWNNGKPY------VQSLKSEVPMVVRLLHYYAG  171 (456)
Q Consensus       104 A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~------~~~e~Gk~~------~~a~~~ev~~~~~~l~~~~~  171 (456)
                      |++||+  .|++++..+|.++|+++++.|++++++|+++      +++|+|||.      .++. .|+..+++.++||++
T Consensus         1 a~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a~-~ev~~~~~~~~~~a~   77 (398)
T TIGR00407         1 AKQAAN--ILAQLSTAEKNDALSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLTE-GRLKGIADGVKDVIE   77 (398)
T ss_pred             ChhHHH--HHHhCCHHHHHHHHHHHHHHHHhChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCCH-HHHHHHHHHHHHHhc
Confidence            467888  8999999999999999999999999999999      999999994      2344 589999999999998


Q ss_pred             hhhHhcCcccCC---CCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHH----
Q 012806          172 WADKIHGLTVPG---DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKL----  244 (456)
Q Consensus       172 ~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l----  244 (456)
                      .++.. +...+.   ..+...++.++|+|||++|+||| | ..+++++++||++||+||+|||+.+|.++..++++    
T Consensus        78 ~a~~~-g~~~~~~~~~~~~~~~~~~~PlGVV~~I~pw~-p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~a  154 (398)
T TIGR00407        78 LADPV-GKVIDGRELDSGLTLERVRVPLGVLGVIYEAR-P-NVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDA  154 (398)
T ss_pred             CCCCC-cccccceecCCCceEEEEEeCcEEEEEEeCCC-c-hHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHH
Confidence            88653 443332   23456788999999999999997 6 67889999999999999999999999999999999    


Q ss_pred             HHHcCCCCCcEEEEeCCc-hhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEEcCCCCHHHH
Q 012806          245 FHEAGLPPGVLNVVSGYG-PTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQA  323 (456)
Q Consensus       245 l~~aGlP~g~v~vv~g~~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~~daD~d~a  323 (456)
                      |.++|+|+|++|+|+|.+ .+.++.|..|++||+|+||||+.+++.+.+.    .++|+++|+|||+|+||++|||+|.|
T Consensus       155 l~eaGlP~gvv~~v~g~~~~~~~~~l~~~~~v~~v~fTGs~~vg~~~~~~----~~~~~~~e~gGk~p~iV~~dADl~~A  230 (398)
T TIGR00407       155 LAQTGLPVGAVQLIETPSRELVSELLDLDEYIDLLIPRGGNGLVRLIKQT----STIPVLGHGDGICHIYLDESADLIKA  230 (398)
T ss_pred             HHHcCCChhHEEEecCCCHHHHHHHHhCCCCeeEEEecCCHHHHHHHHHh----CCCCEEEecCCcceEEEeCCCCHHHH
Confidence            569999999999999854 4578999999999999999999999988764    46899999999999999999999999


Q ss_pred             HHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCe
Q 012806          324 VELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNAT  403 (456)
Q Consensus       324 a~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~  403 (456)
                      ++.+++++|.+ ||.|++++|+|||+++||+|+++|++.+++.++        .+++      .+.+.+++..       
T Consensus       231 a~~iv~~~~~~-GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~--------~~~~------~~~i~~~v~~-------  288 (398)
T TIGR00407       231 IKVIVNAKTQR-PSTCNAIETLLVNKAIAREFLPVLENQLLEKGV--------TIHA------DAYALKLLEL-------  288 (398)
T ss_pred             HHHHHhhhcCC-CCcccccceEEEeHHHHHHHHHHHHHHHHhcCC--------EEec------CHHHHHHHhc-------
Confidence            99999999975 999999999999999999999999999987543        1222      1334444321       


Q ss_pred             EEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          404 LECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       404 v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                         ||           |||+ +++  |+++.+ +||||++|+.++|.+|||++
T Consensus       289 ---g~-----------~tv~-~~~--~~i~~eE~FgPvl~v~~~~~~~eAi~~  324 (398)
T TIGR00407       289 ---GP-----------ATEA-IVC--KTDFDKEFLSLDLSVKIVESLEAAIQH  324 (398)
T ss_pred             ---cC-----------cccc-ccc--cccccchhhCceeEEEEECCHHHHHHH
Confidence               11           3554 333  545555 99999999999999999975

The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif.

>cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family

Probab=100.00  E-value=9.8e-54  Score=436.34  Aligned_cols=299  Identities=19%  Similarity=0.186  Sum_probs=265.0

Q ss_pred             HHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhh----------hccHHHHHHHHHHHHH
Q 012806          102 ATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSL----------KSEVPMVVRLLHYYAG  171 (456)
Q Consensus       102 ~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~----------~~ev~~~~~~l~~~~~  171 (456)
                      ++|++||+  .|++++..+|.++|+++++.|++++++|++++++|+|||+.+..          ..|+..+++.+++++.
T Consensus         1 ~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~~~~~~~~~~~~~~~ev~~~~~~~~~~a~   78 (397)
T cd07077           1 ESAKNAQR--TLAVNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDTERGITA   78 (397)
T ss_pred             ChHHHHHH--HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHhCCcHHHHHHHHHHHHHHHH
Confidence            36889999  89999999999999999999999999999999999999865432          1388899999999987


Q ss_pred             hhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHc---
Q 012806          172 WADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEA---  248 (456)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~a---  248 (456)
                      ...+..+...+.  ....+++++|+|||++|+|||||+. +++++++||++||+||+|||+.+|+++..+++++.++   
T Consensus        79 ~~~~~~~~~~~~--~~~~~~~~~P~Gvv~~i~p~N~P~~-~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~~~  155 (397)
T cd07077          79 SVGHIQDVLLPD--NGETYVRAFPIGVTMHILPSTNPLS-GITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAADAA  155 (397)
T ss_pred             hcCcccceEecC--CCceEEEEecceEEEEEeCCCCchH-HHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHhhc
Confidence            665554433332  3357899999999999999999999 9999999999999999999999999999999999987   


Q ss_pred             CCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHH
Q 012806          249 GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAH  328 (456)
Q Consensus       249 GlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~  328 (456)
                      |+|+++++++++.+.+.+..|+.|+++|.|+||||+++++.+.+.+.   ++|+++|+||++++||++|+|++.|++.++
T Consensus       156 g~p~~~v~~v~~~~~~~~~~l~~~~~vd~v~ftGs~~~~~~v~~~~~---~~~~~~~~gg~~~~iv~~dad~~~a~~~~~  232 (397)
T cd07077         156 HGPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDAAVKHSP---HIPVIGFGAGNSPVVVDETADEERASGSVH  232 (397)
T ss_pred             CCCCceEEEecCCCHHHHHHHHcCCCCCEEEecCCHHHHHHHHHcCC---CCceEEecCCcceEEEcCCCCHHHHHHHHH
Confidence            99999999999877788999999999999999999999999987662   589999999999999999999999999999


Q ss_pred             HHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCC
Q 012806          329 FALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGG  408 (456)
Q Consensus       329 ~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg  408 (456)
                      +++|+| ||.|+++++||||+++||+|+++|+++++.                                  +|++++.||
T Consensus       233 ~~~~~~-GQ~C~a~~~v~V~~~i~d~~~~~l~~~~~~----------------------------------~G~~~~~g~  277 (397)
T cd07077         233 DSKFFD-QNACASEQNLYVVDDVLDPLYEEFKLKLVV----------------------------------EGLKVPQET  277 (397)
T ss_pred             HhhccC-CccCCCCeEEEEehhhhHHHHHHHHHHHHh----------------------------------cCcCcCCCc
Confidence            999999 999999999999999999999999998865                                  577887776


Q ss_pred             cccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEcccccccc
Q 012806          409 DRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTS  454 (456)
Q Consensus       409 ~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~  454 (456)
                      +     ++|+.||      ++|+...+ +||||+++++++|.+|+++
T Consensus       278 ~-----~~~~~pt------~~~~~~~~E~FgPvl~v~~~~~~~eai~  313 (397)
T cd07077         278 K-----PLSKETT------PSFDDEALESMTPLECQFRVLDVISAVE  313 (397)
T ss_pred             e-----eeEEecc------CCCChhhhhhhCceeEEEEEcchHHHHH
Confidence            3     5788887      56655554 9999999999999975553

The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group.

>cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily

Probab=100.00  E-value=4.8e-51  Score=413.35  Aligned_cols=289  Identities=52%  Similarity=0.797  Sum_probs=269.8

Q ss_pred             HHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccC
Q 012806          103 TARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP  182 (456)
Q Consensus       103 ~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~  182 (456)
                      +|+++++  .|+.++.++|.++|+++++.|.++.++|++++++|+|||+.++. .|+..+++.++|++...++..+...+
T Consensus         2 ~a~~a~~--~w~~~~~~~R~~~l~~l~~~l~~~~~~l~~~~~~e~Gk~~~~~~-~ev~~~~~~l~~~~~~~~~~~~~~~~   78 (367)
T cd06534           2 AARAAFK--AWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEAL-GEVARAIDTFRYAAGLADKLGGPELP   78 (367)
T ss_pred             hHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccc
Confidence            5788898  99999999999999999999999999999999999999999987 69999999999999988777653322


Q ss_pred             -CCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 012806          183 -GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGY  261 (456)
Q Consensus       183 -~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~  261 (456)
                       ...+...+.+++|+|||++|.|||||+...++.+++||++||+||+|||+.+|.++..+.++|.++|+|+|++++++++
T Consensus        79 ~~~~~~~~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~ag~p~~~v~~~~~~  158 (367)
T cd06534          79 SPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGG  158 (367)
T ss_pred             ccCCCceeEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHhcCCCcCeEEEEEcC
Confidence             3345667899999999999999999999999999999999999999999999999999999999999999999999997


Q ss_pred             chhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCcccc
Q 012806          262 GPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCA  341 (456)
Q Consensus       262 ~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a  341 (456)
                      +.+.++.|..|+++|.|.||||+++++.+.+.+++ +++|+++|+||++++||++|+|++.|++.+++++|.++||.|++
T Consensus       159 ~~~~~~~l~~~~~vd~v~~tGs~~~~~~v~~~~~~-~~~~~~~e~~g~~~~iV~~~ad~~~aa~~i~~~~~~~~gq~C~s  237 (367)
T cd06534         159 GDEVGAALLSHPRVDKISFTGSTAVGKAIMKAAAE-NLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTA  237 (367)
T ss_pred             chhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhc-CCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCC
Confidence            77788999999999999999999999999999988 78999999999999999999999999999999999999999999


Q ss_pred             CcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecE
Q 012806          342 GSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPT  421 (456)
Q Consensus       342 ~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~Pt  421 (456)
                      +++||||++++++|+++|+                                                            |
T Consensus       238 ~~~v~v~~~~~~~f~~~l~------------------------------------------------------------t  257 (367)
T cd06534         238 ASRLLVHESIYDEFVEKLV------------------------------------------------------------T  257 (367)
T ss_pred             CcEEEEcHHHHHHHHHhhc------------------------------------------------------------e
Confidence            9999999999999999998                                                            7


Q ss_pred             EEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          422 VFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       422 Vl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      |+.+++++++.+.+ +|||+++|+.+++.+|++++
T Consensus       258 l~~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~~  292 (367)
T cd06534         258 VLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIAL  292 (367)
T ss_pred             eeeCCCCCCccccCCccCceEEEEecCCHHHHHHH
Confidence            78888888866665 99999999999999999875

The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri

>TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase

Probab=100.00  E-value=2.6e-50  Score=435.00  Aligned_cols=302  Identities=18%  Similarity=0.168  Sum_probs=255.6

Q ss_pred             HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhc---------------cHH
Q 012806           96 DIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKS---------------EVP  160 (456)
Q Consensus        96 ~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~---------------ev~  160 (456)
                      +++..+++|++||.  .|+.++.++|.++|+++++.|+++.++|+    .++||++.+++..               |+.
T Consensus       287 ~~~~~~~~A~~A~~--~w~~~~~~~R~~~L~~la~~l~~~~eei~----~e~gkdl~~a~~~~~~~~~~~el~~~~~ei~  360 (715)
T TIGR01092       287 GERDMAVAARESSR--MLQALSSEQRKEILHDIADALEDNEDEIL----AENKKDVAAAQGAGYAASLVARLSMSPSKIS  360 (715)
T ss_pred             HHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHHHHHHH----HHHhhhHHHHHhcCcchhHHHHHhCCHHHHH
Confidence            48888999999999  99999999999999999999999999997    4888888776531               477


Q ss_pred             HHHHHHHHHHHhhhHhcCcccC---CCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHH
Q 012806          161 MVVRLLHYYAGWADKIHGLTVP---GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLT  237 (456)
Q Consensus       161 ~~~~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~  237 (456)
                      .+++.++++++. .+..+...+   ...+...+..++|+|||++|+||| |+.+ ++++++||++||+||+|||+.+|.+
T Consensus       361 ~~~~~l~~~a~~-~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN-P~~~-~~~~~~ALaaGN~vvlKpse~tp~t  437 (715)
T TIGR01092       361 SLAISLRQLAAM-EDPIGRVLKRTRIADNLILEKTSVPIGVLLIVFESR-PDAL-VQIASLAIRSGNGLLLKGGKEAARS  437 (715)
T ss_pred             HHHHHHHHHhcC-CCcccccccccccCCCceeEEEEeeceEEEEEeCCC-hHHH-HHHHHHHHHhCCEEEEcCcccchHH
Confidence            888888988873 333333322   122334578899999999999999 9999 6899999999999999999999999


Q ss_pred             HHHHHHHHHHcCCCCC----cEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceE
Q 012806          238 ALYVAKLFHEAGLPPG----VLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFI  313 (456)
Q Consensus       238 ~~~l~~ll~~aGlP~g----~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~i  313 (456)
                      +..++++++++ +|+|    +++++++ +.+.++.|..|+++|+|+||||+.+|+.|++.++    +|+++|+|||+|+|
T Consensus       438 ~~~l~~l~~~a-lp~g~~~~~~~~v~~-~~~~~~~l~~~~~vd~I~fTGS~~vG~~i~~~A~----~pv~lElgGk~p~i  511 (715)
T TIGR01092       438 NAILHKVITEA-IPIHVGKKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKKSTK----IPVLGHADGICHVY  511 (715)
T ss_pred             HHHHHHHHHHH-cCCCCCCcEEEEeCC-hHHHHHHHhcCCCccEEEEcCCHHHHHHHHHhCC----CCEEEEcCCcceEE
Confidence            99999999999 9987    6899985 5678899999999999999999999999998763    89999999999999


Q ss_pred             EcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHH
Q 012806          314 IFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRY  393 (456)
Q Consensus       314 V~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~  393 (456)
                      |++|||++.|++.++.++|.+ ||.|++++|||||+++||+                         |        .+.++
T Consensus       512 V~~dADl~~A~~~i~~~~~~~-GQ~C~a~~rvlV~~~i~d~-------------------------~--------~~~~~  557 (715)
T TIGR01092       512 VDKSASVDMAKRIVRDAKCDY-PAACNAMETLLVHKDLLRN-------------------------G--------LLDDL  557 (715)
T ss_pred             ECCCCCHHHHHHHHHHHhCCC-CCccccCcEEEEehhhccc-------------------------h--------hHHHH
Confidence            999999999987777776655 9999999999999999984                         1        26788


Q ss_pred             HHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          394 IRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       394 i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      ++.+.++|++++ ||.+..   .|+.     ..+++|+.+.+ +||||++|+.|++.+|||++
T Consensus       558 v~~~~~~Ga~l~-Gg~~~~---~~~~-----~~~~~~~i~~eE~FGPvl~v~~~~~~deAi~~  611 (715)
T TIGR01092       558 IDMLRTEGVTIH-GGPRFA---AYLT-----FNISETKSFRTEYSSLACTVEIVDDVYDAIDH  611 (715)
T ss_pred             HHHHHHCCCEEE-CCcchh---heec-----cCCCCchhhhccccCceEEEEEECCHHHHHHH
Confidence            888888999985 875421   2432     23568866665 99999999999999999975

This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region.

>cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC

Probab=100.00  E-value=3.5e-32  Score=278.92  Aligned_cols=269  Identities=18%  Similarity=0.168  Sum_probs=205.7

Q ss_pred             CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH----HhHHHHHHHHHHhcCCChhhhhhccHHHHHHHHH-
Q 012806           93 DAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIE----KNMEELAALETWNNGKPYVQSLKSEVPMVVRLLH-  167 (456)
Q Consensus        93 ~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~----~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~-  167 (456)
                      +..++++.++..+...+  ....++.++..+.+.++++.+.    ..+.+..+.+...+|.+..... .++......++ 
T Consensus         3 ~~~~~~~~~~~l~~~~~--~~~~~~~~~iv~~l~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~~~-~a~~~l~~~~~r   79 (422)
T cd07080           3 SAPDLDALIEELRLNRR--ALAALPVEEIVDFLDRAGKRLLDPDYPLRQQAERLLPTVTGYSEEMLR-EGLKRLMALFRR   79 (422)
T ss_pred             CHHHHHHHHHHHHhhHH--hHhcCCHHHHHHHHHHHHHHhcCCCchHHHHHHHhhhhccCCCHHHHH-HHHHHHHHHcCH
Confidence            34556666666655444  5667888888888888888773    3455566666677777644333 23333333332 


Q ss_pred             -HHHHhhhHhcCccc----CCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHH
Q 012806          168 -YYAGWADKIHGLTV----PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVA  242 (456)
Q Consensus       168 -~~~~~~~~~~~~~~----~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~  242 (456)
                       .......+-.+...    ..+.+...++.++|+|++++|+|||||+ ..++.+++||++||++|+|||+.+|.++..+.
T Consensus        80 ~~l~~~l~~el~~~~~Ld~w~~~~~~~~~~~~P~Gvv~~I~p~N~P~-l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~  158 (422)
T cd07080          80 ENLERILERELGSPGILDEWVPPGRGGYIRAQPRGLVVHIIAGNVPL-LPVWSIVRGLLVKNVNLLKMSSSDPLTATALL  158 (422)
T ss_pred             HHHHHHHHHhcCCcccccCCccCCCCCeeEEcCCceEEEEccCCccc-cHHHHHHHHHHhcCceEEECCCccchHHHHHH
Confidence             11111111111100    0111345678899999999999999999 79999999999999999999999999999999


Q ss_pred             HHHHHcCCCC----CcEEEE--eCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCC-CceEEc
Q 012806          243 KLFHEAGLPP----GVLNVV--SGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGK-SPFIIF  315 (456)
Q Consensus       243 ~ll~~aGlP~----g~v~vv--~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~-~~~iV~  315 (456)
                      ++|.++ +|+    +.++++  +|.+.++++.|..++  |.|+||||+++++.|.+.++. +  +.++|+||| +++|+.
T Consensus       159 ~~l~~~-~p~~~~~~~~~vv~~~g~~~~~~~~l~~~~--D~i~~~Gs~~~~~~i~~~a~~-~--~~~Le~Ggk~s~~vi~  232 (422)
T cd07080         159 RSLADV-DPNHPLTDSISVVYWPGGDAELEERILASA--DAVVAWGGEEAVKAIRSLLPP-G--CRLIDFGPKYSFAVID  232 (422)
T ss_pred             HHHHhc-CCCCcccceEEEEEecCCchHHHHHHHHhC--CEEEEeCCHHHHHHHHHhCCC-C--CeeeecCCceeEEEec
Confidence            999999 787    888888  465666889898876  999999999999999998875 4  568999999 555566


Q ss_pred             CCC----CHHHHHHHHHHHhhhcCCCccccCccccccccc---HHHHHHHHHHHHhhhhcCCC
Q 012806          316 DDA----DVDQAVELAHFALFYNQGQCCCAGSRTYVHERV---YDEFVEKAKARAMRRIVGDP  371 (456)
Q Consensus       316 ~da----D~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v---~~~f~~~l~~~~~~~~~g~p  371 (456)
                      +++    |++.+++.+++++|.++||.|+|+++||||+++   +++|.++|+++++++.-..|
T Consensus       233 ~~a~~~~dl~~aa~~~a~~~~~~~gQ~C~sp~~v~V~~~~~~~~~~f~~~l~~~l~~~~~~~p  295 (422)
T cd07080         233 REALESEKLAEVADALAEDICRYDQQACSSPQVVFVEKDDDEELREFAEALAAALERLPRRYP  295 (422)
T ss_pred             HHhhccccHHHHHHHHHHHHHHHhhhhccCCeEEEEECCCCchHHHHHHHHHHHHHHHHHhCC
Confidence            668    999999999999999999999999999999999   99999999999998764444

Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN.

>COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]

Probab=99.89  E-value=6.7e-22  Score=192.07  Aligned_cols=260  Identities=19%  Similarity=0.247  Sum_probs=210.3

Q ss_pred             HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHh------cCCChhhhhhccHHHHHHHHHH
Q 012806           95 EDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWN------NGKPYVQSLKSEVPMVVRLLHY  168 (456)
Q Consensus        95 ~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e------~Gk~~~~a~~~ev~~~~~~l~~  168 (456)
                      .++.+..+.|++|..  ....++..+|.+.|.++++.|+.+.+++.+....|      +|.+  ++..+-+...-..++.
T Consensus         3 ~~~~~~~~~Ak~A~~--~La~~st~~Kn~aL~a~A~~L~~~~~~IL~AN~~Dl~~are~gl~--~~m~DRL~L~~~Ri~~   78 (417)
T COG0014           3 SELEELGKRAKAASR--KLATLSTEEKNRALLAMADALEAARAEILAANAKDLAAARENGLS--EAMLDRLALTPSRIEA   78 (417)
T ss_pred             hHHHHHHHHHHHHHH--HHhhcChhhHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHcCCc--HHHHHHHcCCHHHHHH
Confidence            467788889999988  89999999999999999999999999998876654      3433  2222233333334444


Q ss_pred             HHHhhhHhcCcccC---------CCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHH
Q 012806          169 YAGWADKIHGLTVP---------GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL  239 (456)
Q Consensus       169 ~~~~~~~~~~~~~~---------~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~  239 (456)
                      ++...++.-....|         .+.+...+..+.|+||+++|  |..-....+....-||.+||+||||.+..+..+..
T Consensus        79 ma~gl~~Va~L~DPvGev~~~~~~~nGL~i~~~rvPLGVigvI--YEsRPnVtvdaaaLclKsGNAvILRGGsea~~Sn~  156 (417)
T COG0014          79 MADGLRQVAALPDPVGEVIDGWTLPNGLQIYRVRVPLGVIGVI--YESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNA  156 (417)
T ss_pred             HHHHHHHHhcCCCchHhhhccccCCCCCEEEEEEccceEEEEE--EecCCccHHHHHHHHHhcCCEEEEeCcHHHhhhHH
Confidence            44433333222222         34567788889999999999  77777888888899999999999999999999999


Q ss_pred             HHHHHHH----HcCCCCCcEEEEeCC-chhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEE
Q 012806          240 YVAKLFH----EAGLPPGVLNVVSGY-GPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFII  314 (456)
Q Consensus       240 ~l~~ll~----~aGlP~g~v~vv~g~-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV  314 (456)
                      .++++++    ++|+|.+.|++|+.. ..++.+.|..+..+|.|...||..--+.+.+.+    -.||+..+-|++.++|
T Consensus       157 ai~~~i~~aL~~~~lP~~aVqli~~~~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~~a----~vPVi~~~~G~CHiyv  232 (417)
T COG0014         157 AIVEVIQEALEKAGLPADAVQLIEDTDREEVLELLRLDGYIDLVIPRGGAGLIRRVVENA----TVPVIEHGVGNCHIYV  232 (417)
T ss_pred             HHHHHHHHHHHHcCCCHHHhhhccCCCHHHHHHHHhhcCceeEEEcCCcHHHHHHHHhCC----cCCEEecCcceEEEEe
Confidence            8888765    569999999999874 445667777788899999999887777766553    4799999999999999


Q ss_pred             cCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhh
Q 012806          315 FDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMR  365 (456)
Q Consensus       315 ~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~  365 (456)
                      +.+||+|+|.+.++.++....+ .|.+.+.++||+.+.++|+.+|.+.+..
T Consensus       233 d~~ADld~A~~ii~nAKtqrPs-~CNA~EtLLVh~~ia~~fLp~l~~~l~~  282 (417)
T COG0014         233 DESADLDKALKIIVNAKTQRPS-VCNAAETLLVHRAIAKSFLPKLANALQE  282 (417)
T ss_pred             cccCCHHHHHHHHHcccCCCCc-ccchHHHHHcCHHHHHHhHHHHHHHHHh
Confidence            9999999999999999999987 9999999999999999999999988874

>KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]

Probab=99.77  E-value=1.4e-17  Score=156.67  Aligned_cols=256  Identities=19%  Similarity=0.214  Sum_probs=193.0

Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHH------HHhcCCChhhhhh-----ccHHHHHHH
Q 012806           97 IDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALE------TWNNGKPYVQSLK-----SEVPMVVRL  165 (456)
Q Consensus        97 v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~------~~e~Gk~~~~a~~-----~ev~~~~~~  165 (456)
                      +++..+.||++..  ..+.++.++|.++|.++++.|..+..++....      +.++|.....-..     +.+.....-
T Consensus         2 ~e~~a~~aR~a~r--~LqaLs~e~R~~il~~iad~L~~~~~~I~~aN~~Dla~Ake~GL~~sll~RL~l~~~K~~sl~~g   79 (433)
T KOG4165|consen    2 VEEMAENAREAGR--ILQALSNEDRADILHHIADLLVDNEKEILAANKKDLAEAKEAGLAESLLKRLDLSPGKISSLAAG   79 (433)
T ss_pred             HHHHHHHHHHHhh--HHHhcChhhHHHHHHHHHHHHHhhHHHHHhcchhhHHHHHhcCccHHHHHHhcCChHHHHHHHHH
Confidence            4567788999988  89999999999999999999988777766543      3455532221110     122222222


Q ss_pred             HHHHHHhhhHhcCccc---CCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHH
Q 012806          166 LHYYAGWADKIHGLTV---PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVA  242 (456)
Q Consensus       166 l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~  242 (456)
                      ++..+.. ....|+..   ..+.+...+....|+||.++|  |.........-..-|++.||.+++|....+..+...|.
T Consensus        80 ~~~ia~~-edpvGRVl~~~~ladgL~L~qvt~PiGvLLVI--FESRPd~l~qiasLAi~SgN~llLKGGkEa~~Sn~~L~  156 (433)
T KOG4165|consen   80 LRQIAEL-EDPVGRVLKKTRLADGLELEQVTVPIGVLLVI--FESRPDCLPQIASLAIASGNGLLLKGGKEAAHSNAALH  156 (433)
T ss_pred             HHHHHhc-ccchhhheeeeeccCCceEEEeeccceEEEEE--eccCchHHHHHHHHHHhcCCeEeecCchhhhhhHHHHH
Confidence            3333331 11112211   134455667778899999999  77777777777788999999999999999999998888


Q ss_pred             HHHHHc----CCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEEcCCC
Q 012806          243 KLFHEA----GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDA  318 (456)
Q Consensus       243 ~ll~~a----GlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~~da  318 (456)
                      ++.+++    |.|.+.|++|.. ..++.+.|..+..||.|...||+.-.+.|.+..    ..||..+..|.|.++|+.||
T Consensus       157 ~~v~~al~~~~~~~~aV~LV~s-REev~dLl~ld~~IDLvIPRGSs~LVr~Ik~~t----kIPVLGHA~GichvYvd~da  231 (433)
T KOG4165|consen  157 KLVQEALGTHGGPGKAVQLVTS-REEVSDLLKLDDYIDLVIPRGSSDLVRSIKDTT----KIPVLGHAEGICHVYVDKDA  231 (433)
T ss_pred             HHHHHHhhhccCchhhhhheec-HHHHHHHhhhhhheeEEecCCcHHHHHHHhhcc----cCcccccccceeEEEecccc
Confidence            888776    778999999998 678888888888999999999999999887653    38999999999999999999


Q ss_pred             CHHHHHHHHHHHhhhcCCCccccCccccccccc-HHHHHHHHHHHH
Q 012806          319 DVDQAVELAHFALFYNQGQCCCAGSRTYVHERV-YDEFVEKAKARA  363 (456)
Q Consensus       319 D~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v-~~~f~~~l~~~~  363 (456)
                      |+++|.+.+..+++.+.. .|.+.+.+++|++. ...|++.|...+
T Consensus       232 d~~kA~riv~DaK~dYPA-aCNAmETLLIh~dl~~~~~~~~l~~~l  276 (433)
T KOG4165|consen  232 DLDKAKRIVRDAKCDYPA-ACNAMETLLIHKDLEQSPFFDDLINML  276 (433)
T ss_pred             CHHHHHHHHhcccCCCch-hhhhHHHHhccHhhhhcchHHHHHHHH
Confidence            999999988888887765 89999999999973 334444444333

>PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins

Probab=99.67  E-value=4e-14  Score=143.88  Aligned_cols=315  Identities=16%  Similarity=0.092  Sum_probs=201.2

Q ss_pred             CCCHHHHHHHHHHHHHHHHH--hHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHH--HHHhhhHhcCcccCCC---CCc
Q 012806          115 KMTPYERSRIMLRAADLIEK--NMEELAALETWNNGKPYVQSLKSEVPMVVRLLHY--YAGWADKIHGLTVPGD---GNY  187 (456)
Q Consensus       115 ~~~~~~R~~iL~~~a~~l~~--~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~--~~~~~~~~~~~~~~~~---~~~  187 (456)
                      .+|.++-.++|.++++.+..  +.....+.+..-+|.+....+ . +......++.  .-...+.-.+.....+   ...
T Consensus         2 ~~~~~~Ii~~l~~~~~~~~~~~~~~r~~~~l~~~~g~~~~~~~-~-l~~~~~~~~r~~L~~~l~~el~~~~~Ld~~~~~~   79 (399)
T PF05893_consen    2 DLPVEEIIDFLDRVGKRWLDPDYPRRAIELLPKITGYSPEMVE-Y-LEALMRWFRRENLERKLERELGNPESLDGWVPRG   79 (399)
T ss_pred             CCCHHHHHHHHHHHHHHhcCCCchHHHHHhhhhhcCCCHHHHH-H-HHHHHHhcCHHHHHHHHHHhcCCHhHhhcccccc
Confidence            45666666777777766643  222245555556666544332 1 2222222110  0001111111111111   112


Q ss_pred             ceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCC----CcEEEE--eCC
Q 012806          188 HIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPP----GVLNVV--SGY  261 (456)
Q Consensus       188 ~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~----g~v~vv--~g~  261 (456)
                      ..+..+.|.|++++|.|.|-|+..+. -++-+|.+||..|+|+|++.+..+..|++.|.+. .|.    ..+.++  ++.
T Consensus        80 ~~~~~~~p~g~v~Hi~agNvp~~~~~-S~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~-~~~~~l~~~i~v~~~~~~  157 (399)
T PF05893_consen   80 DGYVRAFPRGLVFHIAAGNVPLVGFY-SLVRGLLSGNANIVKLSSRDPFLAPALLRSLAEI-DPEHPLADSIAVVYWPGG  157 (399)
T ss_pred             cchhhccCCceEEEEcCCCccchHHH-HHHHHHHhCCceEEECCCCchhHHHHHHHHHHhh-CccchhhhcEEEEEecCC
Confidence            26677889999999999999996554 5677888999999999999999999999999887 554    345566  454


Q ss_pred             chhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCcccc
Q 012806          262 GPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCA  341 (456)
Q Consensus       262 ~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a  341 (456)
                      +.++.+.+.  ...|.++.+||.++.+.+.+...  ...+.+....-.+-.++..+++++.+++.+....+...+|.|.|
T Consensus       158 d~~~~~~~~--~~~D~vv~wGgd~ti~~ir~~~~--~~~~~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~~~dQ~aCsS  233 (399)
T PF05893_consen  158 DEELEEALS--QQADAVVAWGGDETIRAIRQPLP--PGARLIEFGPKYSFAVIDAEAELEEAARRLANDIFLFDQQACSS  233 (399)
T ss_pred             chHHHHHHH--HHCCEEEEeCCHHHHHHHHHHcC--CCCcEeeeCCceEEEEEcCchhHHHHHHHHHHHHHHhhCcccCC
Confidence            566777776  45799999999999999988433  34666666667888888888999999999999999999999999


Q ss_pred             Cccccccc---ccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHH-----HHHHHcCCeEEeCCcccCC
Q 012806          342 GSRTYVHE---RVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYI-----RSGIESNATLECGGDRLGN  413 (456)
Q Consensus       342 ~~~v~V~~---~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i-----~~a~~~Ga~v~~gg~~~~~  413 (456)
                      ++.|||..   .-.++|.++|.+.+.+..---|..       ..+.+....+....     ..+...+..+..+..    
T Consensus       234 p~~ifv~~g~~~~~~~f~~~L~~~L~~~~~~~p~~-------~~s~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~----  302 (399)
T PF05893_consen  234 PQVIFVETGDGDSVEEFAERLAEALERAAERYPRG-------ELSIDEAAAISSLRAEAELRYALDGEYRVWSSDD----  302 (399)
T ss_pred             CeEEEEECCCcccHHHHHHHHHHHHHHHHHhCCCc-------CCCHHHHHHHHHHHHHHHHHHHhcCCcceeecCC----
Confidence            99999993   236888888887777653222221       11222222332222     234444444542221    


Q ss_pred             CCceEecEEEecCCCChHhhhccccceEEeEEEcccccccc
Q 012806          414 RGYFVQPTVFSDVTVSFISLLQFLIPIFSFIILCVVTDCTS  454 (456)
Q Consensus       414 ~g~~i~PtVl~~v~~~~~~~~~~fgPv~~vv~~~~~~eai~  454 (456)
                          -..||+..-.+  +....+++=.+.|+.+++.+|++.
T Consensus       303 ----~~~~V~~~~~~--~~~~~pl~r~v~v~~v~~~~e~~~  337 (399)
T PF05893_consen  303 ----NSWTVIVSPEP--PLLPSPLNRTVYVVPVDSLEELVP  337 (399)
T ss_pred             ----CCEEEEECCCc--ccccCCCCCEEEEEEcCCHHHHHH
Confidence                12455544332  122345566888888888877765

The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process

>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=98.52  E-value=7.1e-07  Score=102.09  Aligned_cols=103  Identities=17%  Similarity=0.131  Sum_probs=83.7

Q ss_pred             ccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEe
Q 012806          180 TVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVS  259 (456)
Q Consensus       180 ~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~  259 (456)
                      ..|.+.|..+..+..|.|++++|+|||   ..++.++..||++||+||+||++.++.       .+  ..+|..+.+.+.
T Consensus      1063 ~LPGPTGEsN~L~l~~RG~vlcisp~~---~~~l~Qi~AALaaGn~vi~~~~~~~~~-------~~--~~Lp~~~~~~~~ 1130 (1208)
T PRK11905       1063 ELPGPTGESNLLSLHPRGRVLCVADTE---EALLRQLAAALATGNVAVVAADSGLAA-------AL--ADLPGLVAARID 1130 (1208)
T ss_pred             cCCCCCCcceeEEecCCceEEEECCcH---HHHHHHHHHHHHhCCEEEEeCCcccHH-------HH--HhCccccccccc
Confidence            456677889999999999999999999   568889999999999999999998762       22  235665555442


Q ss_pred             CCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCC
Q 012806          260 GYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL  299 (456)
Q Consensus       260 g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~  299 (456)
                           .+..+..+++++.|.|+|++++.+.+.+..+++.+
T Consensus      1131 -----~~~~~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~G 1165 (1208)
T PRK11905       1131 -----WTQDWEADDPFAGALLEGDAERARAVRQALAARPG 1165 (1208)
T ss_pred             -----cccccccCCcccEEEEeCCHHHHHHHHHHHHhCCC
Confidence                 33467777889999999999999999999888654

>KOG2449 consensus Methylmalonate semialdehyde dehydrogenase [Amino acid transport and metabolism; Carbohydrate transport and metabolism]

Probab=98.20  E-value=2.8e-06  Score=71.22  Aligned_cols=94  Identities=18%  Similarity=0.151  Sum_probs=72.8

Q ss_pred             HHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHHHHH-cCCeEEeCCcccCCCCceEecEEEecCCCChH
Q 012806          353 DEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIE-SNATLECGGDRLGNRGYFVQPTVFSDVTVSFI  431 (456)
Q Consensus       353 ~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~-~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~  431 (456)
                      ..+.+.|+++++.+++-+...+++|.     .+...++.++|+...- .|-.+..-|   -..|+|+.||+|. |+|+|.
T Consensus         9 ksW~~~lve~ak~l~v~~g~kp~tD~-----~a~~~ri~~liqS~~~~~~r~~yl~~---ya~~~f~~~tiLs-vtP~ms   79 (157)
T KOG2449|consen    9 KSWHPTLVEDAKVLKVNAGEKPQTDK-----YAPKVRIDKLIQSEDPLDGRFIYLPG---YAEGNFVGPTILS-VTPNMS   79 (157)
T ss_pred             hhhhHHHHHhhhheEeccCCCCCccc-----hhHHHHHHHHhcCcCccCCceEEeec---cccCCcccceEEE-ecCCcc
Confidence            45667788889999998888888887     5677788888876211 122222222   2579999999998 999998


Q ss_pred             hhhc-cccceEEeEEEccccccccc
Q 012806          432 SLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       432 ~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      ++.+ +||||+....-...+|+|.+
T Consensus        80 ~ykeeI~gpVlv~l~~~tldd~I~I  104 (157)
T KOG2449|consen   80 CYKEEIFGPVLVRLETETLDDAIFI  104 (157)
T ss_pred             eeHhhhhcceEEEEeecCCCceeEE
Confidence            8887 99999999999999999864

>PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster

Probab=97.68  E-value=0.00015  Score=66.63  Aligned_cols=126  Identities=17%  Similarity=0.221  Sum_probs=90.5

Q ss_pred             CceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHH
Q 012806          310 SPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQK  389 (456)
Q Consensus       310 ~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~  389 (456)
                      .-+||++|.|++.|+.-++.+.-..-|  ..+.-.|+|||+++|+|+++++.+++.      +++...     +-..+.+
T Consensus         6 ~lMIvfe~GDlnsA~~~L~~sl~~Pf~--~~~VatVlVqEsireefi~rvr~~m~p------l~~~va-----~Hpny~r   72 (215)
T PF07368_consen    6 QLMIVFEDGDLNSAMHYLLESLHNPFA--PGAVATVLVQESIREEFIERVRSRMKP------LSPQVA-----NHPNYLR   72 (215)
T ss_pred             eEEEEEeCCCHHHHHHHHHHHHhCccc--CCcEEEEEEeHHHHHHHHHHHHHhCcc------CChhhc-----cCcHHHH
Confidence            347999999999999999999865554  346667999999999999999998864      333222     2233555


Q ss_pred             HHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhccccceEEeEEEccccccccc
Q 012806          390 VLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQFLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       390 v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~~fgPv~~vv~~~~~~eai~~  455 (456)
                      -.+.|+   .-+++++.++...  .-..-.|.++.|.+.+.  +-.--.+|+++..+++..|++++
T Consensus        73 sl~~i~---~l~~~~I~~~~~~--~~~~aSPilV~d~~h~~--fg~~PTgViTlhtFRt~~Ea~~l  131 (215)
T PF07368_consen   73 SLKKIK---CLNAKTIVADFEN--VPPPASPILVCDFTHSY--FGDGPTGVITLHTFRTPKEAIEL  131 (215)
T ss_pred             HHHHHH---hcCCeEEEecccC--CCCCCCCEEEcCCCHHH--cCCCCCeEEEEEccCCHHHHHHH
Confidence            555554   4688999884321  12234699998877765  12345579999999999999875

The function of this family is unknown.

>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=96.17  E-value=0.025  Score=65.79  Aligned_cols=109  Identities=17%  Similarity=0.104  Sum_probs=79.9

Q ss_pred             ccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEe
Q 012806          180 TVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVS  259 (456)
Q Consensus       180 ~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~  259 (456)
                      ..|.+.|..+..+..|.|+|+++.+-.   ...+.++..+|++||.+|+..++..   .    .++  ++||+.+.+.+.
T Consensus      1172 ~LPGPTGE~N~l~l~pRg~vLcl~~~~---~~~~~Ql~Aala~Gn~~v~~~~~~~---~----~~~--~~Lp~~v~~~v~ 1239 (1318)
T PRK11809       1172 LLPGPTGERNTYTLLPRERVLCLADTE---QDALTQLAAVLAVGSQALWPDDALH---R----ALV--AALPAAVQARIQ 1239 (1318)
T ss_pred             cCCCCCCCcceeeccCCCcEEEeCCCH---HHHHHHHHHHHHhCCEEEEeCCchh---H----HHH--HhccHHHHhHhh
Confidence            456777889999999999999998732   3678999999999999988654432   1    122  468988877663


Q ss_pred             CCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEE
Q 012806          260 GYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTL  304 (456)
Q Consensus       260 g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~l  304 (456)
                      -.   . ........++.|.|.|..+..+.+.++.+++.+.-+.+
T Consensus      1240 ~~---~-~~~~~~~~~~avl~~G~~~~l~~~~~~LA~R~GaIv~l 1280 (1318)
T PRK11809       1240 LA---K-DWQLADQPFDAVLFHGDSDQLRALCEQVAQRDGPIVSV 1280 (1318)
T ss_pred             hc---c-ccccccCCccEEEEeCCHHHHHHHHHHHhcCCCCeEEe
Confidence            31   1 12223367999999999999999998888866544433

>PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine

Probab=88.26  E-value=33  Score=35.20  Aligned_cols=166  Identities=17%  Similarity=0.107  Sum_probs=77.2

Q ss_pred             CCcceEEEeeccceEEEEcc-CCchH-HHHHhHHHHHhhcCCEEEE--ecCCCchHHHHHHHHHHHHcCCCCCcEEEEeC
Q 012806          185 GNYHIQTLHEPIGVAGQIVP-WNFPL-LLFTWKVAPALTCGNTIVL--KSAEQTPLTALYVAKLFHEAGLPPGVLNVVSG  260 (456)
Q Consensus       185 ~~~~~~~~~~P~Gvv~~i~p-~N~P~-~~~~~~~~~ALaaGN~vvl--Kps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g  260 (456)
                      .|......+.|+--|++-.| ..+|+ .+.+..++||-.+|..=|+  -|....-.....+.-..+.+|..+    +..-
T Consensus        96 ~G~~~g~~~~Pi~rvG~YVPGG~a~~pStvlM~aiPA~vAGV~~Iv~~TPp~~~G~i~p~vL~Aa~~~Gv~e----vy~v  171 (412)
T PF00815_consen   96 PGVILGQRYRPIERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPPKDGKINPAVLAAAHLAGVDE----VYKV  171 (412)
T ss_dssp             TTEEEEEEEEE-SEEEEE---SSS--THHHHHHHHHHHHHT-SEEEEEE-SS------HHHHHHHHHTT-SE----EEE-
T ss_pred             CCcEEEEEEEEhhheEEEccCCCCCccHHHHHcccchhhcCCCeEEEEcCCCccCCCCHHHHHHHHHcCCCE----EEec
Confidence            35566778899999999999 44565 3446678899999986554  444443333444556667777642    3332


Q ss_pred             CchhhHHHHh----cCCCccEEEEecChhHHHHHHHHHhhCCCccEEEe-cCCCCceE--EcCCCCHHHHHHHHHHHhhh
Q 012806          261 YGPTAGAALA----SHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLE-LGGKSPFI--IFDDADVDQAVELAHFALFY  333 (456)
Q Consensus       261 ~~~~~~~~L~----~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~le-lgG~~~~i--V~~daD~d~aa~~i~~~~~~  333 (456)
                      .|.+.-.+|.    .-+.||+|+=.|..-+...=.. ...    .|-.+ +-|.+=++  -++++|.+.++..++.-+=.
T Consensus       172 GGaqAIAAlAyGTeti~~VDkIvGPGN~yV~~AK~~-v~g----~V~ID~~AGPSEv~ViAD~~A~p~~vAaDLLaQAEH  246 (412)
T PF00815_consen  172 GGAQAIAALAYGTETIPKVDKIVGPGNAYVTAAKRL-VFG----DVGIDMIAGPSEVLVIADETANPEFVAADLLAQAEH  246 (412)
T ss_dssp             -HHHHHHHHHH--SSS---SEEE---SHHHHHHHHH-HHH----S-EES------EEEEEE-TTS-HHHHHHHHHHHHTT
T ss_pred             ccHHHHHHHHcCCCCCCceeEEECCCcHHHHHHHHH-hcC----CcccCCCCCCCceEEEECCCCCHHHHHHHHHHHhcc
Confidence            2555444443    2488999999997654332111 111    22222 23444433  35578999988877776655


Q ss_pred             cCCCccccCcccccccc--cHHHHHHHHHHHHh
Q 012806          334 NQGQCCCAGSRTYVHER--VYDEFVEKAKARAM  364 (456)
Q Consensus       334 ~~GQ~C~a~~~v~V~~~--v~~~f~~~l~~~~~  364 (456)
                      ...-.     .++|..+  +.++..+.+.+++.
T Consensus       247 d~~a~-----~vLvt~s~~la~~V~~~v~~~l~  274 (412)
T PF00815_consen  247 DPDAQ-----AVLVTTSEELAEAVEAEVERQLE  274 (412)
T ss_dssp             -TT-E-----EEEEES-HHHHHHHHHHHHHHHT
T ss_pred             CCCCc-----eEEEECCHHHHHHHHHHHHHHHH
Confidence            54322     2455444  34454445544444

In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B.

>COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism]

Probab=87.62  E-value=18  Score=36.90  Aligned_cols=165  Identities=18%  Similarity=0.147  Sum_probs=89.9

Q ss_pred             CCcceEEEeeccceEEEEcc---CCchHHHHHhHHHHHhhcCCEEEE--ecCCCchHHHHHHHHHHHHcCCCCCcEEEEe
Q 012806          185 GNYHIQTLHEPIGVAGQIVP---WNFPLLLFTWKVAPALTCGNTIVL--KSAEQTPLTALYVAKLFHEAGLPPGVLNVVS  259 (456)
Q Consensus       185 ~~~~~~~~~~P~Gvv~~i~p---~N~P~~~~~~~~~~ALaaGN~vvl--Kps~~~p~~~~~l~~ll~~aGlP~g~v~vv~  259 (456)
                      .|......+.|+--|++-.|   .-||- +.+...+||-.+|+.=|+  -|..+.- .+..+.-..+.+|+.+    +..
T Consensus       106 ~Gv~~g~~~~Pi~~VGlYVPGG~A~ypS-tvLM~avPAkvAGv~~Iv~~tPp~~~g-v~p~iL~AA~~~Gv~e----Iy~  179 (425)
T COG0141         106 PGVVLGQRWRPIERVGLYVPGGKAAYPS-TVLMNAVPAKVAGVEEIVVVTPPPKDG-VNPEILAAARLAGVDE----VYK  179 (425)
T ss_pred             CCcEEEEEEEEhhheEEEccCCCcCChH-HHHHhhccHhhcCCceEEEECCCCCCC-CCHHHHHHHHHhCcHH----HHH
Confidence            45677888999999999999   44443 345567899999987544  4544422 2333334445555442    111


Q ss_pred             CCchhhHHHHhcC----CCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCc-eEE-cCCCCHHHHHHHHHHHhhh
Q 012806          260 GYGPTAGAALASH----MDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSP-FII-FDDADVDQAVELAHFALFY  333 (456)
Q Consensus       260 g~~~~~~~~L~~~----~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~-~iV-~~daD~d~aa~~i~~~~~~  333 (456)
                      -.|.+.-.+|.-.    +.||+|.=.|+.-+.-. .++..  +..-+=+. -|.+= +|| ++++|.+.++..++.-+=.
T Consensus       180 vGGAQAIAAlAYGTetV~~VdkIvGPGN~yVtaA-Kr~v~--g~V~ID~~-AGPSEvlViAD~ta~p~~vA~DLLsQAEH  255 (425)
T COG0141         180 VGGAQAIAALAYGTETVPKVDKIVGPGNAYVTAA-KRLVS--GVVGIDMI-AGPSEVLVIADETANPDFVAADLLSQAEH  255 (425)
T ss_pred             ccCHHHHHHHHccCCcCCccCeeeCCCcHHHHHH-HHHhh--CCcccCCC-CCCceEEEEeCCCCCHHHHHHHHHHHhhc
Confidence            1245555555543    78999998886543221 11111  11111112 23333 333 4458999988877766544


Q ss_pred             cCCCccccCcccccccc--cHHHHHHHHHHHHh
Q 012806          334 NQGQCCCAGSRTYVHER--VYDEFVEKAKARAM  364 (456)
Q Consensus       334 ~~GQ~C~a~~~v~V~~~--v~~~f~~~l~~~~~  364 (456)
                      ..    .+. .|+|..+  ..++..+.+.+++.
T Consensus       256 d~----~a~-aiLvT~s~~la~~v~~~v~~~l~  283 (425)
T COG0141         256 DP----DAQ-AILVTDSEELAEAVEAAVERQLE  283 (425)
T ss_pred             CC----Cce-EEEEeCcHHHHHHHHHHHHHHHH
Confidence            43    233 3455444  23444444444443

>COG1438 ArgR Arginine repressor [Transcription]

Probab=83.04  E-value=9.5  Score=33.33  Aligned_cols=121  Identities=20%  Similarity=0.148  Sum_probs=71.8

Q ss_pred             HHHHHHHHHHHHHH-HHhHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccc
Q 012806          119 YERSRIMLRAADLI-EKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIG  197 (456)
Q Consensus       119 ~~R~~iL~~~a~~l-~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~G  197 (456)
                      ++|.+.++++...= -.-.++|.+.+..+ |--+.|+.             .+.+..++..-..+.+.+...|....+.|
T Consensus         5 ~~R~~~Ik~iI~~~~i~TQ~Elv~~L~~~-Gi~vTQaT-------------vSRDlkelglvKv~~~~g~~~Y~l~~~~~   70 (150)
T COG1438           5 EERLELIKEIITEEKISTQEELVELLQEE-GIEVTQAT-------------VSRDLKELGLVKVRNEKGTYVYSLPAELG   70 (150)
T ss_pred             HHHHHHHHHHHHhCCCCCHHHHHHHHHHc-CCeEehHH-------------HHHHHHHcCCEEecCCCCcEEEEeCCccC
Confidence            45555555443221 12467888887654 43366653             23344444444455444444444433333


Q ss_pred             eEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 012806          198 VAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGY  261 (456)
Q Consensus       198 vv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~  261 (456)
                      +--    -..+...+...+...=-.||-+|+|..|-   .+..+++++...+.| +.+..|.|+
T Consensus        71 ~~~----~~~~~~~~~~~v~~vd~~~~~ivlkT~PG---~A~~ia~~lD~~~~~-eIlGTIaGd  126 (150)
T COG1438          71 VPP----TSKLKRYLKDLVLSIDRNGNLIVLKTSPG---AAQLIARLLDSLAKD-EILGTIAGD  126 (150)
T ss_pred             CCc----hhhHHHHHHHHheeeccCCcEEEEEeCCc---hHHHHHHHHHhcCch-hhheeeeCC
Confidence            321    12222334455666677899999999876   578899999998888 889999884

>PRK13769 histidinol dehydrogenase; Provisional

Probab=82.41  E-value=59  Score=32.86  Aligned_cols=186  Identities=17%  Similarity=0.091  Sum_probs=100.2

Q ss_pred             HHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHH
Q 012806          159 VPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA  238 (456)
Q Consensus       159 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~  238 (456)
                      +..+.+.++.|.....+.... . ...|......+.|+-.|++-.|.-|| .+.+...+||-.+|+.=|+--+|-.....
T Consensus        59 i~~a~~~I~~fh~~q~~~~~~-~-~~~Gv~~g~~~~Pi~rvG~YVPa~~p-StvLM~~iPAkvAGV~~Iv~~TPp~~i~p  135 (368)
T PRK13769         59 ALEAAKSLEALYSRLKPPEAV-D-FYGGVLRSVFWKPVRRAALYVPARYV-STLVMLAVPARAAGVEEIYVVTPPRGVTG  135 (368)
T ss_pred             HHHHHHHHHHHHHHhCCCCeE-e-cCCCeEEEEEEeeeeeeEEEeccchH-HHHHHhhccHhhcCCCeEEEeCCCCCCCH
Confidence            344445555555433221111 1 12445567788999999999995444 45567789999999876554332111222


Q ss_pred             HHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEe--cCCCCceEEcC
Q 012806          239 LYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLE--LGGKSPFIIFD  316 (456)
Q Consensus       239 ~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~le--lgG~~~~iV~~  316 (456)
                      ..|+ ..+.+|..+    +..-.|.+.-.++.-..+||+|+=.|..-+...=....   +  .|-.+  .|-.--+|+-|
T Consensus       136 ~vL~-aa~~~Gv~e----Iy~vGGAQAIAa~a~gt~VDkIvGPGN~yV~~AK~~v~---g--~V~ID~~AGPSEvlViAD  205 (368)
T PRK13769        136 ELLA-VAKELGVKG----VLAIGGPHGLAYAVFHMGVDMVAGPGGLYVQAAKYVLS---Q--YVGIDGIEGPTELVVYAE  205 (368)
T ss_pred             HHHH-HHHHcCCCe----eecccCHHHHHHHhcCCCcCEEECCCcHHHHHHHHHHh---C--CcCCCCcCCCcceEEEcC
Confidence            3333 557777552    33322555445666555899999888654432111111   1  12222  23344456667


Q ss_pred             CCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHh
Q 012806          317 DADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAM  364 (456)
Q Consensus       317 daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~  364 (456)
                      ++|.+.++..++.-+=....     .+.++|..+  +++.++..+.++
T Consensus       206 ~a~p~~vAaDLLaQAEH~~~-----a~~iLvT~s--~~la~~V~~~v~  246 (368)
T PRK13769        206 GVPPEVAVRGALAQLEHGPT-----SFAYLLSTD--AELLKAAEEIYR  246 (368)
T ss_pred             CCCHHHHHHHHHHHhhcCCC-----CcEEEEECC--HHHHHHHHHHHH
Confidence            79999887777665543322     223455444  344444444443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	456
1ag8_A	499	Aldehyde Dehydrogenase From Bovine Mitochondria Len		1e-134
2onn_A	500	Arg475gln Mutant Of Human Mitochondrial Aldehyde De		1e-134
1o05_A	500	Apo Form Of Human Mitochondrial Aldehyde Dehydrogen		1e-134
1cw3_A	494	Human Mitochondrial Aldehyde Dehydrogenase Complexe		1e-134
1zum_A	500	Human Mitochondrial Aldehyde Dehydrogenase Asian Va		1e-134
1bi9_A	499	Retinal Dehydrogenase Type Two With Nad Bound Lengt		1e-133
3n81_A	500	T244a Mutant Of Human Mitochondrial Aldehyde Dehydr		1e-133
1nzw_A	500	Cys302ser Mutant Of Human Mitochondrial Aldehyde De		1e-133
3n80_A	500	Human Mitochondrial Aldehyde Dehydrogenase, Apo For		1e-133
3inl_A	500	Human Mitochondrial Aldehyde Dehydrogenase Asian Va		1e-133
4fr8_A	500	Crystal Structure Of Human Aldehyde Dehydrogenase-2		1e-132
1bxs_A	501	Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad		1e-128
1o9j_A	501	The X-Ray Crystal Structure Of Eta-Crystallin Lengt		1e-120
2o2p_A	517	Crystal Structure Of The C-Terminal Domain Of Rat 1		1e-89
3rhm_A	517	Crystal Structure Of The E673q Mutant Of C-Terminal		4e-89
3rhj_A	517	Crystal Structure Of The E673a Mutant Of The C-Term		8e-89
3rhr_A	517	Crystal Structure Of The C707a Mutant Of The C-Term		2e-88
4gnz_A	517	Crystal Structure Of The C707s Mutant Of C-terminal		2e-88
3rhl_A	517	Crystal Structure Of The E673aC707A DOUBLE MUTANT O		1e-87
2wox_A	489	Betaine Aldehyde Dehydrogenase From Pseudomonas Aer		4e-79
2wme_A	490	Crystallographic Structure Of Betaine Aldehyde Dehy		4e-79
2xdr_A	489	Crystallographic Structure Of Betaine Aldehyde Dehy		2e-78
3zqa_A	490	Crystallographic Structure Of Betaine Aldehyde Dehy		4e-78
2wme_C	490	Crystallographic Structure Of Betaine Aldehyde Dehy		5e-78
4a0m_A	496	Crystal Structure Of Betaine Aldehyde Dehydrogenase		4e-75
2d4e_A	515	Crystal Structure Of The Hpcc From Thermus Thermoph		9e-75
1a4s_A	503	Betaine Aldehyde Dehydrogenase From Cod Liver Lengt		6e-70
3jz4_C	481	Crystal Structure Of E. Coli Nadp Dependent Enzyme		4e-69
3jz4_A	481	Crystal Structure Of E. Coli Nadp Dependent Enzyme		4e-69
3r31_A	517	Crystal Structure Of Betaine Aldehyde Dehydrogenase		1e-68
3iwj_A	503	Crystal Structure Of Aminoaldehyde Dehydrogenase 2		7e-68
3iwk_A	503	Crystal Structure Of Aminoaldehyde Dehydrogenase 1		2e-67
3ed6_A	520	1.7 Angstrom Resolution Crystal Structure Of Betain		5e-67
4i8p_A	520	Crystal Structure Of Aminoaldehyde Dehydrogenase 1a		2e-65
4i9b_A	517	Structure Of Aminoaldehyde Dehydrogenase 1 From Sol		2e-65
4i8q_A	514	Structure Of The Aminoaldehyde Dehydrogenase 1 E260		7e-65
3u4j_A	528	Crystal Structure Of Nad-Dependent Aldehyde Dehydro		8e-65
3ifg_A	484	Crystal Structure Of Succinate-Semialdehyde Dehydro		1e-60
3ek1_A	504	Crystal Structure Of Aldehyde Dehydrogenase From Br		3e-60
4dal_A	498	Crystal Structure Of Putative Aldehyde Dehydrogenas		3e-60
1wnb_A	495	Escherichia Coli Ydcw Gene Product Is A Medium-Chai		2e-59
3i44_A	497	Crystal Structure Of Aldehyde Dehydrogenase From Ba		8e-59
3ty7_A	478	Crystal Structure Of Aldehyde Dehydrogenase Family		1e-57
3b4w_A	495	Crystal Structure Of Mycobacterium Tuberculosis Ald		3e-57
2opx_A	479	Crystal Structure Of Lactaldehyde Dehydrogenase Fro		2e-53
2imp_A	479	Crystal Structure Of Lactaldehyde Dehydrogenase Fro		2e-53
2hg2_A	479	Structure Of Lactaldehyde Dehydrogenase Length = 47		2e-53
2w8n_A	487	The Crytal Structure Of The Oxidized Form Of Human		3e-53
3qan_A	538	Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy		4e-52
2w8p_A	487	The Crystal Structure Of Human C340a Ssadh Length =		5e-52
1t90_A	486	Crystal Structure Of Methylmalonate Semialdehyde De		3e-50
3k2w_A	497	Crystal Structure Of Betaine-Aldehyde Dehydrogenase		1e-48
3r64_A	508	Crystal Structure Of A Nad-Dependent Benzaldehyde D		1e-47
3rjl_A	538	Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy		2e-47
3rh9_A	506	The Crystal Structure Of Oxidoreductase From Marino		5e-46
4dng_A	485	Crystal Structure Of Putative Aldehyde Dehydrogenas		2e-45
1uzb_A	516	1-pyrroline-5-carboxylate Dehydrogenase Length = 51		2e-45
2bhp_A	516	Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd		4e-45
2bja_A	516	Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd		5e-44
2jg7_A	510	Crystal Structure Of Seabream Antiquitin And Elucid		2e-41
1euh_A	475	Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase		4e-41
2id2_A	475	Gapn T244s Mutant X-Ray Structure At 2.5 A Length =		9e-41
2esd_A	475	Crystal Structure Of Thioacylenzyme Intermediate Of		2e-40
1qi1_A	475	Ternary Complex Of An Nadp Dependent Aldehyde Dehyd		6e-40
3prl_A	505	Crystal Structure Of Nadp-Dependent Glyceraldehyde-		1e-39
3pqa_A	486	Crystal Structure Of Glyceraldehyde-3-Phosphate Deh		2e-38
2j6l_A	500	Structure Of Aminoadipate-Semialdehyde Dehydrogenas		9e-37
1uxv_A	501	Structural Basis For Allosteric Regulation And Subs		4e-36
1uxn_A	501	Structural Basis For Allosteric Regulation And Subs		8e-36
1ky8_A	501	Crystal Structure Of The Non-Phosphorylating Glycer		1e-35
3ros_A	484	Crystal Structure Of Nad-Dependent Aldehyde Dehydro		1e-32
4f9i_A	1026	Crystal Structure Of Proline Utilization A (Puta) F		2e-32
4e4g_A	521	Crystal Structure Of Putative Methylmalonate-Semial		2e-31
3haz_A	1001	Crystal Structure Of Bifunctional Proline Utilizati		1e-30
3efv_A	462	Crystal Structure Of A Putative Succinate-Semialdeh		1e-29
3ju8_A	490	Crystal Structure Of Succinylglutamic Semialdehyde		2e-29
4h7n_A	474	The Structure Of Putative Aldehyde Dehydrogenase Pu		1e-25
3lv1_A	457	Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy		5e-24
3lns_A	457	Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy		8e-23
3v9j_A	563	Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylat		1e-22
3sza_A	469	Crystal Structure Of Human Aldh3a1 - Apo Form Lengt		1e-21
3v9g_A	566	Crystal Structure Of Human 1-Pyrroline-5-Carboxylat		1e-21
3v9h_A	566	Crystal Structure Of Human 1-Pyrroline-5-Carboxylat		3e-21
1ad3_A	452	Class 3 Aldehyde Dehydrogenase Complex With Nicotin		4e-21
3v9i_A	566	Crystal Structure Of Human 1-Pyrroline-5-Carboxylat		8e-21
2y53_A	534	Crystal Structure Of E257q Mutant Of The Box Pathwa		1e-16
2vro_A	532	Crystal Structure Of Aldehyde Dehydrogenase From Bu		1e-16
2y52_A	534	Crystal Structure Of E496a Mutant Of The Box Pathwa		1e-16
2y51_A	534	Crystal Structure Of E167a Mutant Of The Box Pathwa		1e-16
2y5d_A	534	Crystal Structure Of C296a Mutant Of The Box Pathwa		2e-15
3v4c_A	528	Crystal Structure Of A Semialdehyde Dehydrogenase F		2e-10
3my7_A	452	The Crystal Structure Of The Acdh Domain Of An Alco		3e-06
1eyy_A	510	Crystal Structure Of The Nadp+ Dependent Aldehyde D		2e-04

>pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499

Iteration: 1
 Score =  476 bits (1224), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 226/374 (60%), Positives = 278/374 (74%), Gaps = 1/374 (0%)
Query: 54  QISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-P 112
           ++ Y +  IN ++ DA S KTFP  +P T +VI +VAEGD  D+DRAV  AR AF  G P
Sbjct: 15  EVLYNQIFINNEWHDAVSKKTFPTVNPSTGDVICHVAEGDKADVDRAVKAARAAFQLGSP 74
Query: 113 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGW 172
           W +M   ER R++ R ADLIE++   LAALET +NGKPY+ S   ++ MV++ L YYAGW
Sbjct: 75  WRRMDASERGRLLNRLADLIERDRTYLAALETLDNGKPYIISYLVDLDMVLKCLRYYAGW 134
Query: 173 ADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAE 232
           ADK HG T+P DG+Y   T HEP+GV GQI+PWNFPLL+  WK+ PAL  GN +V+K AE
Sbjct: 135 ADKYHGKTIPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAE 194
Query: 233 QTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE 292
           QTPLTALYVA L  EAG PPGV+NV+ G+GPTAGAA+ASH DVDK++FTG  + G ++Q 
Sbjct: 195 QTPLTALYVANLIKEAGFPPGVVNVIPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQV 254
Query: 293 LAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVY 352
            A KSNLK VTLE+GGKSP II  DAD+D AVE AHFALF+NQGQCCCAGSRT+V E +Y
Sbjct: 255 AAGKSNLKRVTLEIGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIY 314
Query: 353 DEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG 412
            EFVE++ ARA  R+VG+PF S  EQGPQ+D  QF+KVL YI+SG E    L CGG    
Sbjct: 315 AEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKVLGYIKSGKEEGLKLLCGGGAAA 374
Query: 413 NRGYFVQPTVFSDV 426
           +RGYF+QPTVF D+
Sbjct: 375 DRGYFIQPTVFGDL 388

>pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500

Iteration: 1
 Score =  475 bits (1222), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 225/367 (61%), Positives = 274/367 (74%), Gaps = 1/367 (0%)
Query: 61  LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPY 119
            IN ++ DA S KTFP  +P T EVI  VAEGD ED+D+AV  AR AF  G PW +M   
Sbjct: 23  FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDAS 82
Query: 120 ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL 179
            R R++ R ADLIE++   LAALET +NGKPYV S   ++ MV++ L YYAGWADK HG 
Sbjct: 83  HRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK 142
Query: 180 TVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239
           T+P DG++   T HEP+GV GQI+PWNFPLL+  WK+ PAL  GN +V+K AEQTPLTAL
Sbjct: 143 TIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTAL 202
Query: 240 YVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299
           YVA L  EAG PPGV+N+V G+GPTAGAA+ASH DVDK++FTG  + G+++Q  A  SNL
Sbjct: 203 YVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNL 262
Query: 300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 359
           K VTLELGGKSP II  DAD+D AVE AHFALF+NQGQCCCAGSRT+V E +YDEFVE++
Sbjct: 263 KRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERS 322
Query: 360 KARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQ 419
            ARA  R+VG+PF S  EQGPQ+D  QF+K+L YI +G +  A L CGG    +RGYF+Q
Sbjct: 323 VARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQ 382
Query: 420 PTVFSDV 426
           PTVF DV
Sbjct: 383 PTVFGDV 389

>pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500

Iteration: 1
 Score =  475 bits (1222), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 225/367 (61%), Positives = 274/367 (74%), Gaps = 1/367 (0%)
Query: 61  LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPY 119
            IN ++ DA S KTFP  +P T EVI  VAEGD ED+D+AV  AR AF  G PW +M   
Sbjct: 23  FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDAS 82
Query: 120 ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL 179
            R R++ R ADLIE++   LAALET +NGKPYV S   ++ MV++ L YYAGWADK HG 
Sbjct: 83  HRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK 142
Query: 180 TVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239
           T+P DG++   T HEP+GV GQI+PWNFPLL+  WK+ PAL  GN +V+K AEQTPLTAL
Sbjct: 143 TIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTAL 202
Query: 240 YVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299
           YVA L  EAG PPGV+N+V G+GPTAGAA+ASH DVDK++FTG  + G+++Q  A  SNL
Sbjct: 203 YVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNL 262
Query: 300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 359
           K VTLELGGKSP II  DAD+D AVE AHFALF+NQGQCCCAGSRT+V E +YDEFVE++
Sbjct: 263 KRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERS 322
Query: 360 KARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQ 419
            ARA  R+VG+PF S  EQGPQ+D  QF+K+L YI +G +  A L CGG    +RGYF+Q
Sbjct: 323 VARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQ 382
Query: 420 PTVFSDV 426
           PTVF DV
Sbjct: 383 PTVFGDV 389

>pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494

Iteration: 1
 Score =  475 bits (1222), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 225/367 (61%), Positives = 274/367 (74%), Gaps = 1/367 (0%)
Query: 61  LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPY 119
            IN ++ DA S KTFP  +P T EVI  VAEGD ED+D+AV  AR AF  G PW +M   
Sbjct: 17  FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDAS 76
Query: 120 ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL 179
            R R++ R ADLIE++   LAALET +NGKPYV S   ++ MV++ L YYAGWADK HG 
Sbjct: 77  HRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK 136
Query: 180 TVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239
           T+P DG++   T HEP+GV GQI+PWNFPLL+  WK+ PAL  GN +V+K AEQTPLTAL
Sbjct: 137 TIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTAL 196
Query: 240 YVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299
           YVA L  EAG PPGV+N+V G+GPTAGAA+ASH DVDK++FTG  + G+++Q  A  SNL
Sbjct: 197 YVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNL 256
Query: 300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 359
           K VTLELGGKSP II  DAD+D AVE AHFALF+NQGQCCCAGSRT+V E +YDEFVE++
Sbjct: 257 KRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERS 316
Query: 360 KARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQ 419
            ARA  R+VG+PF S  EQGPQ+D  QF+K+L YI +G +  A L CGG    +RGYF+Q
Sbjct: 317 VARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQ 376
Query: 420 PTVFSDV 426
           PTVF DV
Sbjct: 377 PTVFGDV 383

>pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500

Iteration: 1
 Score =  474 bits (1220), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 225/367 (61%), Positives = 274/367 (74%), Gaps = 1/367 (0%)
Query: 61  LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPY 119
            IN ++ DA S KTFP  +P T EVI  VAEGD ED+D+AV  AR AF  G PW +M   
Sbjct: 23  FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDAS 82
Query: 120 ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL 179
            R R++ R ADLIE++   LAALET +NGKPYV S   ++ MV++ L YYAGWADK HG 
Sbjct: 83  HRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK 142
Query: 180 TVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239
           T+P DG++   T HEP+GV GQI+PWNFPLL+  WK+ PAL  GN +V+K AEQTPLTAL
Sbjct: 143 TIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTAL 202
Query: 240 YVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299
           YVA L  EAG PPGV+N+V G+GPTAGAA+ASH DVDK++FTG  + G+++Q  A  SNL
Sbjct: 203 YVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNL 262
Query: 300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 359
           K VTLELGGKSP II  DAD+D AVE AHFALF+NQGQCCCAGSRT+V E +YDEFVE++
Sbjct: 263 KRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERS 322
Query: 360 KARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQ 419
            ARA  R+VG+PF S  EQGPQ+D  QF+K+L YI +G +  A L CGG    +RGYF+Q
Sbjct: 323 VARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQ 382
Query: 420 PTVFSDV 426
           PTVF DV
Sbjct: 383 PTVFGDV 389

>pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499

Iteration: 1
 Score =  473 bits (1216), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 216/378 (57%), Positives = 283/378 (74%), Gaps = 1/378 (0%)
Query: 51  PPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDE 110
           P ++I YTK  IN ++ ++ SG+ FPV +P T E +  V E D  DID+AV  AR AF  
Sbjct: 12  PNLEIKYTKIFINNEWQNSESGRVFPVCNPATGEQVCEVQEADKVDIDKAVQAARLAFSL 71
Query: 111 GP-WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYY 169
           G  W +M   ER R++ + ADL+E++   LA +E+ N GKP++Q+   ++  V++ L YY
Sbjct: 72  GSVWRRMDASERGRLLDKLADLVERDRATLATMESLNGGKPFLQAFYIDLQGVIKTLRYY 131
Query: 170 AGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLK 229
           AGWADKIHG+T+P DG+Y   T HEPIGV GQI+PWNFPLL+FTWK+APAL CGNT+V+K
Sbjct: 132 AGWADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFTWKIAPALCCGNTVVIK 191
Query: 230 SAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKI 289
            AEQTPL+ALY+  L  EAG PPGV+N++ GYGPTAGAA+ASH+ +DK++FTG  + GK+
Sbjct: 192 PAEQTPLSALYMGALIKEAGFPPGVVNILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKL 251
Query: 290 VQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHE 349
           +QE A +SNLK VTLELGGKSP IIF DAD+D AVE AH  +F+NQGQCC AGSR +V E
Sbjct: 252 IQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEE 311
Query: 350 RVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGD 409
            +Y+EFV+++  RA RRIVG PF    EQGPQID +Q+ K+L  I+SG+   A LECGG 
Sbjct: 312 SIYEEFVKRSVERAKRRIVGSPFDPTTEQGPQIDKKQYNKILELIQSGVAEGAKLECGGK 371
Query: 410 RLGNRGYFVQPTVFSDVT 427
            LG +G+F++PTVFS+VT
Sbjct: 372 GLGRKGFFIEPTVFSNVT 389

>pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500

Iteration: 1
 Score =  473 bits (1216), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 224/367 (61%), Positives = 273/367 (74%), Gaps = 1/367 (0%)
Query: 61  LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPY 119
            IN ++ DA S KTFP  +P T EVI  VAEGD ED+D+AV  AR AF  G PW +M   
Sbjct: 23  FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDAS 82
Query: 120 ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL 179
            R R++ R ADLIE++   LAALET +NGKPYV S   ++ MV++ L YYAGWADK HG 
Sbjct: 83  HRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK 142
Query: 180 TVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239
           T+P DG++   T HEP+GV GQI+PWNFPLL+  WK+ PAL  GN +V+K AEQTPLTAL
Sbjct: 143 TIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTAL 202
Query: 240 YVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299
           YVA L  EAG PPGV+N+V G+GPTAGAA+ASH DVDK++F G  + G+++Q  A  SNL
Sbjct: 203 YVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFAGSTEIGRVIQVAAGSSNL 262
Query: 300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 359
           K VTLELGGKSP II  DAD+D AVE AHFALF+NQGQCCCAGSRT+V E +YDEFVE++
Sbjct: 263 KRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERS 322
Query: 360 KARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQ 419
            ARA  R+VG+PF S  EQGPQ+D  QF+K+L YI +G +  A L CGG    +RGYF+Q
Sbjct: 323 VARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQ 382
Query: 420 PTVFSDV 426
           PTVF DV
Sbjct: 383 PTVFGDV 389

>pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500

Iteration: 1
 Score =  471 bits (1213), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 224/367 (61%), Positives = 273/367 (74%), Gaps = 1/367 (0%)
Query: 61  LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPY 119
            IN ++ DA S KTFP  +P T EVI  VAEGD ED+D+AV  AR AF  G PW +M   
Sbjct: 23  FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDAS 82
Query: 120 ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL 179
            R R++ R ADLIE++   LAALET +NGKPYV S   ++ MV++ L YYAGWADK HG 
Sbjct: 83  HRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK 142
Query: 180 TVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239
           T+P DG++   T HEP+GV GQI+PWNFPLL+  WK+ PAL  GN +V+K AEQTPLTAL
Sbjct: 143 TIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTAL 202
Query: 240 YVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299
           YVA L  EAG PPGV+N+V G+GPTAGAA+ASH DVDK++FTG  + G+++Q  A  SNL
Sbjct: 203 YVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNL 262
Query: 300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 359
           K VTLELGGKSP II  DAD+D AVE AHFALF+NQGQC CAGSRT+V E +YDEFVE++
Sbjct: 263 KRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERS 322
Query: 360 KARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQ 419
            ARA  R+VG+PF S  EQGPQ+D  QF+K+L YI +G +  A L CGG    +RGYF+Q
Sbjct: 323 VARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQ 382
Query: 420 PTVFSDV 426
           PTVF DV
Sbjct: 383 PTVFGDV 389

>pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500

Iteration: 1
 Score =  471 bits (1212), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 224/367 (61%), Positives = 273/367 (74%), Gaps = 1/367 (0%)
Query: 61  LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPY 119
            IN ++ DA S KTFP  +P T EVI  VAEGD ED+D+AV  AR AF  G PW +M   
Sbjct: 23  FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDAS 82
Query: 120 ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL 179
            R R++ R ADLIE++   LAALET +NGKPYV S   ++ MV++ L YYAGWADK HG 
Sbjct: 83  HRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK 142
Query: 180 TVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239
           T+P DG++   T HEP+GV GQI+PWNFPLL+  WK+ PAL  GN +V+K AEQTPLTAL
Sbjct: 143 TIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTAL 202
Query: 240 YVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299
           YVA L  EAG PPGV+N+V G+GPTAGAA+ASH DVDK++FTG  + G+++Q  A  SNL
Sbjct: 203 YVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNL 262
Query: 300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 359
           K VTLELGGKSP II  DAD+D AVE AHFALF+NQGQC CAGSRT+V E +YDEFVE++
Sbjct: 263 KRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCXCAGSRTFVQEDIYDEFVERS 322
Query: 360 KARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQ 419
            ARA  R+VG+PF S  EQGPQ+D  QF+K+L YI +G +  A L CGG    +RGYF+Q
Sbjct: 323 VARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQ 382
Query: 420 PTVFSDV 426
           PTVF DV
Sbjct: 383 PTVFGDV 389

>pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500

Iteration: 1
 Score =  471 bits (1211), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 224/367 (61%), Positives = 273/367 (74%), Gaps = 1/367 (0%)
Query: 61  LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPY 119
            IN ++ DA S KTFP  +P T EVI  VAEGD ED+D+AV  AR AF  G PW +M   
Sbjct: 23  FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDAS 82
Query: 120 ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL 179
            R R++ R ADLIE++   LAALET +NGKPYV S   ++ MV++ L YYAGWADK HG 
Sbjct: 83  HRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK 142
Query: 180 TVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239
           T+P DG++   T HEP+GV GQI+PWNFPLL+  WK+ PAL  GN +V+K AEQTPLTAL
Sbjct: 143 TIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTAL 202
Query: 240 YVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299
           YVA L  EAG PPGV+N+V G+GPTAGAA+ASH DVDK++FTG  + G+++Q  A  SNL
Sbjct: 203 YVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNL 262
Query: 300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 359
           K VTLELGGKSP II  DAD+D AVE AHFALF+NQGQC CAGSRT+V E +YDEFVE++
Sbjct: 263 KRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERS 322
Query: 360 KARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQ 419
            ARA  R+VG+PF S  EQGPQ+D  QF+K+L YI +G +  A L CGG    +RGYF+Q
Sbjct: 323 VARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQ 382
Query: 420 PTVFSDV 426
           PTVF DV
Sbjct: 383 PTVFGDV 389

>pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500

Iteration: 1
 Score =  467 bits (1201), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 222/367 (60%), Positives = 272/367 (74%), Gaps = 1/367 (0%)
Query: 61  LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPY 119
            IN ++ DA S KTFP  +P T EVI  VAEGD ED+D+AV  AR AF  G PW +M   
Sbjct: 23  FINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDAS 82
Query: 120 ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL 179
            R R++ R ADLIE++   LAALET +NGKPYV S   ++ MV++ L YYAGWADK HG 
Sbjct: 83  HRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK 142
Query: 180 TVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239
           T+P DG++   T HEP+GV GQI+PWNFPLL+  WK+ PAL  GN +V+K AEQTPLTAL
Sbjct: 143 TIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTAL 202
Query: 240 YVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299
           YVA L  EAG PPGV+N+V G+GPTAGAA+ASH DVDK++FTG  + G+++Q  A  SNL
Sbjct: 203 YVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNL 262
Query: 300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 359
           K VTL+LGGKSP II  DAD+D AVE AHFALF+NQGQ C AGSRT+V E +YDEFVE++
Sbjct: 263 KRVTLQLGGKSPNIIMSDADMDWAVEQAHFALFFNQGQSCSAGSRTFVQEDIYDEFVERS 322
Query: 360 KARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQ 419
            ARA  R+VG+PF S  EQGPQ+D  QF+K+L YI +G +  A L CGG    +RGYF+Q
Sbjct: 323 VARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQ 382
Query: 420 PTVFSDV 426
           PTVF DV
Sbjct: 383 PTVFGDV 389

>pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501

Iteration: 1
 Score =  456 bits (1172), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 211/376 (56%), Positives = 273/376 (72%), Gaps = 1/376 (0%)
Query: 53  VQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG- 111
           +Q  YTK  IN ++  + SGK FPV++P T E +  V EGD ED+D+AV  AR+AF  G 
Sbjct: 16  LQFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGS 75
Query: 112 PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAG 171
           PW  M   ER R++ + ADLIE++   LA +E  N GK +  +   ++   ++ L Y AG
Sbjct: 76  PWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAG 135
Query: 172 WADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSA 231
           WADKI G T+P DGN+   T  EP+GV GQI+PWNFPLL+F WK+ PAL+CGNT+V+K A
Sbjct: 136 WADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPA 195
Query: 232 EQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQ 291
           EQTPLTAL++  L  EAG PPGV+N+V GYGPTAGAA++SHMDVDK++FTG  + GK+++
Sbjct: 196 EQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIK 255
Query: 292 ELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERV 351
           E A KSNLK V+LELGGKSP I+F DAD+D AVE AH  +FY+QGQCC A SR +V E +
Sbjct: 256 EAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESI 315
Query: 352 YDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRL 411
           YDEFV ++  RA + ++G+P   GV QGPQID EQ++K+L  I SG +  A LECGG   
Sbjct: 316 YDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPW 375
Query: 412 GNRGYFVQPTVFSDVT 427
           GN+GYF+QPTVFSDVT
Sbjct: 376 GNKGYFIQPTVFSDVT 391

>pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501

Iteration: 1
 Score =  427 bits (1097), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 202/376 (53%), Positives = 265/376 (70%), Gaps = 1/376 (0%)
Query: 53  VQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG- 111
           ++I +TK  IN ++ ++ SGKTFPV++P T E I  V E D ED+D+AV  AR+AF  G 
Sbjct: 16  IKIQHTKLFINNEWHESVSGKTFPVFNPATEEKICEVEEADKEDVDKAVKAAREAFQMGS 75
Query: 112 PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAG 171
           PW  M   ER +++ + ADLIE++   LA LE+ N GK +  +   ++   ++ L Y AG
Sbjct: 76  PWRTMDASERGQLIYKLADLIERDRLLLATLESINAGKVFASAYLMDLDYCIKALRYCAG 135
Query: 172 WADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSA 231
           WADKI G T+P DG +   T HEPIGV G I PWN P++L   K+ PAL CGNT+++K A
Sbjct: 136 WADKIQGRTIPVDGEFFSYTRHEPIGVCGLIFPWNAPMILLACKIGPALCCGNTVIVKPA 195
Query: 232 EQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQ 291
           EQTPLTAL+VA L  EAG PPGV+N+V GYGPTAGAA++SHMDVDK++FTG  + GK++Q
Sbjct: 196 EQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKMIQ 255
Query: 292 ELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERV 351
           E AAKSNLK VTLELG K+P I+F DAD+D AVE AH  +F NQGQ C A S+ +V E +
Sbjct: 256 EAAAKSNLKRVTLELGAKNPCIVFADADLDSAVEFAHQGVFTNQGQSCIAASKLFVEEAI 315
Query: 352 YDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRL 411
           YDEFV+++  RA + + G+P   GV  GPQI+  Q  K++  I SG +  A LECGG   
Sbjct: 316 YDEFVQRSVERAKKYVFGNPLTPGVNHGPQINKAQHNKIMELIESGKKEGAKLECGGGPW 375
Query: 412 GNRGYFVQPTVFSDVT 427
           GN+GYF+QPTVFS+VT
Sbjct: 376 GNKGYFIQPTVFSNVT 391

>pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase Length = 517

Iteration: 1
 Score =  326 bits (836), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 153/370 (41%), Positives = 235/370 (63%), Gaps = 4/370 (1%)
Query: 61  LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYE 120
            I G+FVDA   KT+   +P    VI  V+     D+D+AVA A++AF+ G W K+   +
Sbjct: 40  FIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARD 99
Query: 121 RSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLT 180
           R R++ R AD++E++ EELA +E  + G  Y  +LK+ V M ++   Y+AGW DKI G T
Sbjct: 100 RGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGAT 159
Query: 181 VPGDG---NYHIQ-TLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
           +P +    N ++  T  EP+GV G ++PWN+PL++ +WK A  L  GNT+V+K A+ TPL
Sbjct: 160 IPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPL 219
Query: 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
           TAL  A+L  +AG+P GV+N++ G G   G  L+ H DV K+ FTG  + GK + +  A 
Sbjct: 220 TALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCAL 279
Query: 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 356
           SN+K V+LELGGKSP IIF D D+++AV++   ++F+N+G+ C A  R +V E ++++FV
Sbjct: 280 SNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFV 339
Query: 357 EKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGY 416
           +K      +  +G+P +     GPQ      +K++ Y + G++  ATL CGG+++   G+
Sbjct: 340 QKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGF 399
Query: 417 FVQPTVFSDV 426
           F QPTVF+DV
Sbjct: 400 FFQPTVFTDV 409

>pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase Length = 517

Iteration: 1
 Score =  325 bits (833), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 152/370 (41%), Positives = 235/370 (63%), Gaps = 4/370 (1%)
Query: 61  LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYE 120
            I G+FVDA   KT+   +P    VI  V+     D+D+AVA A++AF+ G W K+   +
Sbjct: 40  FIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARD 99
Query: 121 RSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLT 180
           R R++ R AD++E++ EELA +E  + G  Y  +LK+ V M ++   Y+AGW DKI G T
Sbjct: 100 RGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGAT 159
Query: 181 VPGDG---NYHIQ-TLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
           +P +    N ++  T  EP+GV G ++PWN+PL++ +WK A  L  GNT+V+K A+ TPL
Sbjct: 160 IPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPL 219
Query: 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
           TAL  A+L  +AG+P GV+N++ G G   G  L+ H DV K+ FTG  + GK + +  A 
Sbjct: 220 TALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCAL 279
Query: 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 356
           SN+K V+L+LGGKSP IIF D D+++AV++   ++F+N+G+ C A  R +V E ++++FV
Sbjct: 280 SNVKKVSLQLGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFV 339
Query: 357 EKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGY 416
           +K      +  +G+P +     GPQ      +K++ Y + G++  ATL CGG+++   G+
Sbjct: 340 QKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGF 399
Query: 417 FVQPTVFSDV 426
           F QPTVF+DV
Sbjct: 400 FFQPTVFTDV 409

>pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517

Iteration: 1
 Score =  324 bits (830), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 152/370 (41%), Positives = 234/370 (63%), Gaps = 4/370 (1%)
Query: 61  LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYE 120
            I G+FVDA   KT+   +P    VI  V+     D+D+AVA A++AF+ G W K+   +
Sbjct: 40  FIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARD 99
Query: 121 RSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLT 180
           R R++ R AD++E++ EELA +E  + G  Y  +LK+ V M ++   Y+AGW DKI G T
Sbjct: 100 RGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGAT 159
Query: 181 VPGDG---NYHIQ-TLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
           +P +    N ++  T  EP+GV G ++PWN+PL++ +WK A  L  GNT+V+K A+ TPL
Sbjct: 160 IPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPL 219
Query: 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
           TAL  A+L  +AG+P GV+N++ G G   G  L+ H DV K+ FTG  + GK + +  A 
Sbjct: 220 TALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCAL 279
Query: 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 356
           SN+K V+L LGGKSP IIF D D+++AV++   ++F+N+G+ C A  R +V E ++++FV
Sbjct: 280 SNVKKVSLALGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFV 339
Query: 357 EKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGY 416
           +K      +  +G+P +     GPQ      +K++ Y + G++  ATL CGG+++   G+
Sbjct: 340 QKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGF 399
Query: 417 FVQPTVFSDV 426
           F QPTVF+DV
Sbjct: 400 FFQPTVFTDV 409

>pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadph Length = 517

Iteration: 1
 Score =  322 bits (826), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 152/370 (41%), Positives = 234/370 (63%), Gaps = 4/370 (1%)
Query: 61  LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYE 120
            I G+FVDA   KT+   +P    VI  V+     D+D+AVA A++AF+ G W K+   +
Sbjct: 40  FIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARD 99
Query: 121 RSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLT 180
           R R++ R AD++E++ EELA +E  + G  Y  +LK+ V M ++   Y+AGW DKI G T
Sbjct: 100 RGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGAT 159
Query: 181 VPGDG---NYHIQ-TLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
           +P +    N ++  T  EP+GV G ++PWN+PL++ +WK A  L  GNT+V+K A+ TPL
Sbjct: 160 IPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPL 219
Query: 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
           TAL  A+L  +AG+P GV+N++ G G   G  L+ H DV K+ FTG  + GK + +  A 
Sbjct: 220 TALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCAL 279
Query: 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 356
           SN+K V+LELGGKSP IIF D D+++AV++   ++F+N+G+   A  R +V E ++++FV
Sbjct: 280 SNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENAIAAGRLFVEESIHNQFV 339
Query: 357 EKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGY 416
           +K      +  +G+P +     GPQ      +K++ Y + G++  ATL CGG+++   G+
Sbjct: 340 QKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGF 399
Query: 417 FVQPTVFSDV 426
           F QPTVF+DV
Sbjct: 400 FFQPTVFTDV 409

>pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadp Length = 517

Iteration: 1
 Score =  322 bits (826), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 152/370 (41%), Positives = 234/370 (63%), Gaps = 4/370 (1%)
Query: 61  LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYE 120
            I G+FVDA   KT+   +P    VI  V+     D+D+AVA A++AF+ G W K+   +
Sbjct: 40  FIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARD 99
Query: 121 RSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLT 180
           R R++ R AD++E++ EELA +E  + G  Y  +LK+ V M ++   Y+AGW DKI G T
Sbjct: 100 RGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGAT 159
Query: 181 VPGDG---NYHIQ-TLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
           +P +    N ++  T  EP+GV G ++PWN+PL++ +WK A  L  GNT+V+K A+ TPL
Sbjct: 160 IPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPL 219
Query: 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
           TAL  A+L  +AG+P GV+N++ G G   G  L+ H DV K+ FTG  + GK + +  A 
Sbjct: 220 TALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCAL 279
Query: 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 356
           SN+K V+LELGGKSP IIF D D+++AV++   ++F+N+G+   A  R +V E ++++FV
Sbjct: 280 SNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENSIAAGRLFVEESIHNQFV 339
Query: 357 EKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGY 416
           +K      +  +G+P +     GPQ      +K++ Y + G++  ATL CGG+++   G+
Sbjct: 340 QKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGF 399
Query: 417 FVQPTVFSDV 426
           F QPTVF+DV
Sbjct: 400 FFQPTVFTDV 409

>pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517

Iteration: 1
 Score =  320 bits (820), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 151/370 (40%), Positives = 233/370 (62%), Gaps = 4/370 (1%)
Query: 61  LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYE 120
            I G+FVDA   KT+   +P    VI  V+     D+D+AVA A++AF+ G W K+   +
Sbjct: 40  FIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARD 99
Query: 121 RSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLT 180
           R R++ R AD++E++ EELA +E  + G  Y  +LK+ V M ++   Y+AGW DKI G T
Sbjct: 100 RGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGAT 159
Query: 181 VPGDG---NYHIQ-TLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
           +P +    N ++  T  EP+GV G ++PWN+PL++ +WK A  L  GNT+V+K A+ TPL
Sbjct: 160 IPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPL 219
Query: 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
           TAL  A+L  +AG+P GV+N++ G G   G  L+ H DV K+ FTG  + GK + +  A 
Sbjct: 220 TALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCAL 279
Query: 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 356
           SN+K V+L LGGKSP IIF D D+++AV++   ++F+N+G+   A  R +V E ++++FV
Sbjct: 280 SNVKKVSLALGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENAIAAGRLFVEESIHNQFV 339
Query: 357 EKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGY 416
           +K      +  +G+P +     GPQ      +K++ Y + G++  ATL CGG+++   G+
Sbjct: 340 QKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGF 399
Query: 417 FVQPTVFSDV 426
           F QPTVF+DV
Sbjct: 400 FFQPTVFTDV 409

>pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489

Iteration: 1
 Score =  291 bits (746), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 157/392 (40%), Positives = 224/392 (57%), Gaps = 7/392 (1%)
Query: 59  KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
           K  I G++V+A+SG TF   +P   EV+A V     ED++RAV +A +   +  W  MT 
Sbjct: 7   KLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEG--QKVWAAMTA 64
Query: 119 YERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG 178
            +RSRI+ RA D++ +  +ELAALET + GKP  ++   ++     +L YYAG    I G
Sbjct: 65  MQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEG 124
Query: 179 LTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 238
             +P      + T  EP+GV   I  WN+P+ +  WK APAL  GN ++ K +E TPLTA
Sbjct: 125 EQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTA 184
Query: 239 LYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN 298
           L +A+++ EAG+P GV NV++G G   G  L  H  ++K+SFTG   TGK V   A+ S+
Sbjct: 185 LKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSS 244
Query: 299 LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 358
           LK VT+ELGGKSP IIF DAD+D+A ++A  A F++ GQ C  G+R ++H      F  K
Sbjct: 245 LKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAK 304
Query: 359 AKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGN----R 414
              R  R  +GDP       GP +     + VL YI SG    A L CGG+R+ +    +
Sbjct: 305 VLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGK 364
Query: 415 GYFVQPTVFSDVTVSF-ISLLQFLIPIFSFII 445
           G +V PTVF+D      I   +   P+ S ++
Sbjct: 365 GAYVAPTVFTDCRDDMTIVREEIFGPVMSILV 396

>pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490

Iteration: 1
 Score =  291 bits (746), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 157/392 (40%), Positives = 224/392 (57%), Gaps = 7/392 (1%)
Query: 59  KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
           K  I G++V+A+SG TF   +P   EV+A V     ED++RAV +A +   +  W  MT 
Sbjct: 8   KLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEG--QKVWAAMTA 65
Query: 119 YERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG 178
            +RSRI+ RA D++ +  +ELAALET + GKP  ++   ++     +L YYAG    I G
Sbjct: 66  MQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEG 125
Query: 179 LTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 238
             +P      + T  EP+GV   I  WN+P+ +  WK APAL  GN ++ K +E TPLTA
Sbjct: 126 EQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTA 185
Query: 239 LYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN 298
           L +A+++ EAG+P GV NV++G G   G  L  H  ++K+SFTG   TGK V   A+ S+
Sbjct: 186 LKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSS 245
Query: 299 LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 358
           LK VT+ELGGKSP IIF DAD+D+A ++A  A F++ GQ C  G+R ++H      F  K
Sbjct: 246 LKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAK 305
Query: 359 AKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGN----R 414
              R  R  +GDP       GP +     + VL YI SG    A L CGG+R+ +    +
Sbjct: 306 VLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGK 365
Query: 415 GYFVQPTVFSDVTVSF-ISLLQFLIPIFSFII 445
           G +V PTVF+D      I   +   P+ S ++
Sbjct: 366 GAYVAPTVFTDCRDDMTIVREEIFGPVMSILV 397

>pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489

Iteration: 1
 Score =  289 bits (740), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 156/392 (39%), Positives = 223/392 (56%), Gaps = 7/392 (1%)
Query: 59  KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
           K  I G++V+A+SG TF   +P   EV+A V     ED++RAV +A +   +  W  MT 
Sbjct: 7   KLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEG--QKVWAAMTA 64
Query: 119 YERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG 178
            +RSRI+ RA D++ +  +ELAALET + GKP  ++   ++     +L YYAG    I G
Sbjct: 65  MQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEG 124
Query: 179 LTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 238
             +P      + T  EP+GV   I  WN+P+ +  WK APAL  GN ++ K +E TPLTA
Sbjct: 125 EQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTA 184
Query: 239 LYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN 298
           L +A+++ EAG+P GV NV++G G   G  L  H  ++K+SFTG   TGK V   A+ S+
Sbjct: 185 LKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSS 244
Query: 299 LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 358
           LK VT+ LGGKSP IIF DAD+D+A ++A  A F++ GQ C  G+R ++H      F  K
Sbjct: 245 LKEVTMALGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAK 304
Query: 359 AKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGN----R 414
              R  R  +GDP       GP +     + VL YI SG    A L CGG+R+ +    +
Sbjct: 305 VLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGK 364
Query: 415 GYFVQPTVFSDVTVSF-ISLLQFLIPIFSFII 445
           G +V PTVF+D      I   +   P+ S ++
Sbjct: 365 GAYVAPTVFTDCRDDMTIVREEIFGPVMSILV 396

>pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490

Iteration: 1
 Score =  288 bits (738), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 156/392 (39%), Positives = 223/392 (56%), Gaps = 7/392 (1%)
Query: 59  KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
           K  I G++V+A+SG TF   +P   EV+A V     ED++RAV +A +   +  W  MT 
Sbjct: 8   KLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEG--QKVWAAMTA 65
Query: 119 YERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG 178
            +RSRI+ RA D++ +  +ELAALET + GKP  ++   ++     +L YYAG    I G
Sbjct: 66  MQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEG 125
Query: 179 LTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 238
             +P      + T  EP+GV   I  WN+P+ +  WK APAL  GN ++ K +E TPLTA
Sbjct: 126 EQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTA 185
Query: 239 LYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN 298
           L +A+++ EAG+P GV NV++G G   G  L  H  ++K+SFTG   TGK V   A+ S+
Sbjct: 186 LKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSS 245
Query: 299 LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 358
           LK VT+ELGGKSP IIF DAD+D+A ++A  A F++ GQ    G+R ++H      F  K
Sbjct: 246 LKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVATNGTRVFIHRSQQARFEAK 305
Query: 359 AKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGN----R 414
              R  R  +GDP       GP +     + VL YI SG    A L CGG+R+ +    +
Sbjct: 306 VLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGK 365
Query: 415 GYFVQPTVFSDVTVSF-ISLLQFLIPIFSFII 445
           G +V PTVF+D      I   +   P+ S ++
Sbjct: 366 GAYVAPTVFTDCRDDMTIVREEIFGPVMSILV 397

>pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490

Iteration: 1
 Score =  288 bits (736), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 156/392 (39%), Positives = 223/392 (56%), Gaps = 7/392 (1%)
Query: 59  KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
           K  I G++V+A+SG TF   +P   EV+A V     ED++RAV +A +   +  W  MT 
Sbjct: 8   KLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEG--QKVWAAMTA 65
Query: 119 YERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG 178
            +RSRI+ RA D++ +  +ELAALET + GKP  ++   ++     +L YYAG    I G
Sbjct: 66  MQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEG 125
Query: 179 LTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 238
             +P      + T  EP+GV   I  WN+P+ +  WK APAL  GN ++ K +E TPLTA
Sbjct: 126 EQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTA 185
Query: 239 LYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN 298
           L +A+++ EAG+P GV NV++G G   G  L  H  ++K+SFTG   TGK V   A+ S+
Sbjct: 186 LKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSS 245
Query: 299 LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 358
           LK VT+ELGGKSP IIF DAD+D+A ++A  A F++ GQ    G+R ++H      F  K
Sbjct: 246 LKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVXTNGTRVFIHRSQQARFEAK 305
Query: 359 AKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGN----R 414
              R  R  +GDP       GP +     + VL YI SG    A L CGG+R+ +    +
Sbjct: 306 VLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGK 365
Query: 415 GYFVQPTVFSDVTVSF-ISLLQFLIPIFSFII 445
           G +V PTVF+D      I   +   P+ S ++
Sbjct: 366 GAYVAPTVFTDCRDDMTIVREEIFGPVMSILV 397

>pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496

Iteration: 1
 Score =  278 bits (711), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 146/377 (38%), Positives = 220/377 (58%), Gaps = 10/377 (2%)
Query: 61  LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYE 120
            I+G++ +       PV +P T E+I ++    AED++ AV  AR+AF    W   +   
Sbjct: 11  FIDGEWREPIKKNRIPVINPSTEEIIGDIPAATAEDVEVAVVAARRAFRRNNWSATSGAH 70
Query: 121 RSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG-- 178
           R+  +   A  I +  +    LET ++GKP+ +++  ++  V     Y+AG A+ + G  
Sbjct: 71  RATYLRAIAAKITEKKDHFVKLETIDSGKPFDEAVL-DIDDVASCFEYFAGQAEALDGKQ 129
Query: 179 ---LTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTP 235
              +T+P +  +    L +P+GV G I PWN+PLL+ TWK+APAL  G T VLK +E   
Sbjct: 130 KAPVTLPME-RFKSHVLRQPLGVVGLISPWNYPLLMATWKIAPALAAGCTAVLKPSELAS 188
Query: 236 LTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA 295
           +T L   ++ +E GLPPGVLN+++G GP AGA L SH DVDK++FTG   TG  V   AA
Sbjct: 189 VTCLEFGEVCNEVGLPPGVLNILTGLGPDAGAPLVSHPDVDKIAFTGSSATGSKVMASAA 248
Query: 296 KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEF 355
           +  +KPVTLELGGKSP ++F+D D+D+ VE   F  F+  GQ C A SR  VHE +  EF
Sbjct: 249 QL-VKPVTLELGGKSPIVVFEDVDIDKVVEWTIFGCFWTNGQICSATSRLLVHESIAAEF 307
Query: 356 VEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGN-- 413
           V+K         + DPF+ G   GP I   Q+ K++++I +     AT+  GG R  +  
Sbjct: 308 VDKLVKWTKNIKISDPFEEGCRLGPVISKGQYDKIMKFISTAKSEGATILYGGSRPEHLK 367
Query: 414 RGYFVQPTVFSDVTVSF 430
           +GY+++PT+ +D++ S 
Sbjct: 368 KGYYIEPTIVTDISTSM 384

>pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515

Iteration: 1
 Score =  277 bits (709), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 157/375 (41%), Positives = 225/375 (60%), Gaps = 17/375 (4%)
Query: 60  NLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPY 119
           + I G+FV + SG+TFP  DP T EV+   A G   ++DRA   A +AF    W +    
Sbjct: 29  HFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQR--WSRTKAK 86
Query: 120 ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADK-IHG 178
           ER R +LR A+LIEK+ +ELA +E  + G+  ++ ++++V        +YA +A+  +  
Sbjct: 87  ERKRYLLRIAELIEKHADELAVMECLDAGQ-VLRIVRAQVARAAENFAFYAEYAEHAMED 145
Query: 179 LTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 238
            T P D ++   T+  P G  G I PWN PL+L TW++APAL  GNT+VLK AE +P TA
Sbjct: 146 RTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTA 205
Query: 239 LYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN 298
             +A++  EA LPPGV N+V G+G  AGAAL +H  V  L+ TG  +TGKIV   AA  +
Sbjct: 206 TKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAA-DH 264
Query: 299 LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 358
           LK ++ ELGGKSP ++F DAD+++A++   F +F   G+ C A SR  V E+++++FV K
Sbjct: 265 LKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGK 324
Query: 359 A--KARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG---- 412
              +ARA+R  VG P     E GP I PE  Q+VL Y+ +G    A L  GG+R      
Sbjct: 325 VVERARAIR--VGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFR 382
Query: 413 ----NRGYFVQPTVF 423
               +RG ++ PTVF
Sbjct: 383 GEDLSRGNYLLPTVF 397

>pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503

Iteration: 1
 Score =  261 bits (667), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 143/373 (38%), Positives = 212/373 (56%), Gaps = 12/373 (3%)
Query: 60  NLINGQFVDAASGKTF-PVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
           N   G+ + +  G T  PV++P T  V+  +    AE++D+AV +A+ A+ +  W KM  
Sbjct: 22  NYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLK--WSKMAG 79
Query: 119 YERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG 178
            ERSR+ML AA +I +  + +A LE  NNGK   ++ + ++    + + YYAG A  + G
Sbjct: 80  IERSRVMLEAARIIRERRDNIAKLEVINNGKTITEA-EYDIDAAWQCIEYYAGLAPTLSG 138
Query: 179 LTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 238
             +   G     T  EP+GV   I+ WN+P ++  WK APAL CGN +V K +  TP+T 
Sbjct: 139 QHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTG 198
Query: 239 LYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN 298
           + +A++FHEAG+P G++NVV G G   G+ L  H +V K+SFTG   TGK V E++AK+ 
Sbjct: 199 VILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKT- 256
Query: 299 LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 358
           +K VTLELGGKSP +IF D +++ AV  A  A F  QGQ C  G+R +V   +  +F+E+
Sbjct: 257 VKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEE 316
Query: 359 AKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG------ 412
              R    +VGDP  +    G  I   Q  KVL ++    +  A + CGG+ L       
Sbjct: 317 VVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKL 376
Query: 413 NRGYFVQPTVFSD 425
             GYF+ P V  +
Sbjct: 377 KNGYFMSPCVLDN 389

>pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481

Iteration: 1
 Score =  258 bits (660), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 149/388 (38%), Positives = 216/388 (55%), Gaps = 9/388 (2%)
Query: 61  LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYE 120
           LING+++DA +G+   V +P   + + +V +  A++   A+  A +A     W  +T  E
Sbjct: 13  LINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTAKE 70
Query: 121 RSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLT 180
           R+ I+    +L+ ++ ++LA L T   GKP  ++ K E+      + ++A    +I+G T
Sbjct: 71  RATILRNWFNLMMEHQDDLARLMTLEQGKPLAEA-KGEISYAASFIEWFAEEGKRIYGDT 129
Query: 181 VPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239
           +PG   +  +  + +PIGV   I PWNFP  + T K  PAL  G T+VLK A QTP +AL
Sbjct: 130 IPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSAL 189
Query: 240 YVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299
            +A+L   AG+P GV NVV+G     G  L S+  V KLSFTG  + G+ + E  AK ++
Sbjct: 190 ALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAK-DI 248
Query: 300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 359
           K V+LELGG +PFI+FDDAD+D+AVE A  + F N GQ C   +R YV + VYD F EK 
Sbjct: 249 KKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKL 308
Query: 360 KARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQ 419
           +    +  +GD   +GV  GP ID +   KV  +I   +E  A + CGG      G F Q
Sbjct: 309 QQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQ 368
Query: 420 PTVFSDV----TVSFISLLQFLIPIFSF 443
           PT+  DV     VS       L P+F F
Sbjct: 369 PTILVDVPANAKVSKEETFGPLAPLFRF 396

>pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481

Iteration: 1
 Score =  258 bits (659), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 149/388 (38%), Positives = 216/388 (55%), Gaps = 9/388 (2%)
Query: 61  LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYE 120
           LING+++DA +G+   V +P   + + +V +  A++   A+  A +A     W  +T  E
Sbjct: 13  LINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTAKE 70
Query: 121 RSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLT 180
           R+ I+    +L+ ++ ++LA L T   GKP  ++ K E+      + ++A    +I+G T
Sbjct: 71  RATILRNWFNLMMEHQDDLARLMTLEQGKPLAEA-KGEISYAASFIEWFAEEGKRIYGDT 129
Query: 181 VPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239
           +PG   +  +  + +PIGV   I PWNFP  + T K  PAL  G T+VLK A QTP +AL
Sbjct: 130 IPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSAL 189
Query: 240 YVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299
            +A+L   AG+P GV NVV+G     G  L S+  V KLSFTG  + G+ + E  AK ++
Sbjct: 190 ALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAK-DI 248
Query: 300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 359
           K V+LELGG +PFI+FDDAD+D+AVE A  + F N GQ C   +R YV + VYD F EK 
Sbjct: 249 KKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKL 308
Query: 360 KARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQ 419
           +    +  +GD   +GV  GP ID +   KV  +I   +E  A + CGG      G F Q
Sbjct: 309 QQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQ 368
Query: 420 PTVFSDV----TVSFISLLQFLIPIFSF 443
           PT+  DV     VS       L P+F F
Sbjct: 369 PTILVDVPANAKVSKEETFGPLAPLFRF 396

>pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517

Iteration: 1
 Score =  256 bits (655), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 147/372 (39%), Positives = 211/372 (56%), Gaps = 9/372 (2%)
Query: 60  NLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPY 119
           + I+G +V+  +G  F    P T E+IA +       ++RA+A+A++A  E  W  M+P 
Sbjct: 17  HFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKE--WAAMSPM 74
Query: 120 ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWA-DKIHG 178
            R RI+ RAAD++ +  + L+ LET + GKP  +++ ++         ++ G A   ++G
Sbjct: 75  ARGRILKRAADIMRERNDALSTLETLDTGKPIQETIVADPTSGADAFEFFGGIAPSALNG 134
Query: 179 LTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 238
             +P  G++   T   P+GV   I  WN+P  +  WK APAL  GN +V K +E TPL A
Sbjct: 135 DYIPLGGDFAY-TKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGA 193
Query: 239 LYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN 298
           L +A++  EAGLP G+ NV+ G   T G  L +H DV K+S TG   TG+ V   AA  +
Sbjct: 194 LKIAEILIEAGLPKGLFNVIQGDRDT-GPLLVNHPDVAKVSLTGSVPTGRKVAA-AAAGH 251
Query: 299 LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 358
           LK VT+ELGGKSP I+FDDAD++ AV  A    FY+ GQ C  G+R +V ++    F+E 
Sbjct: 252 LKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLEN 311
Query: 359 AKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGG---DRLGNRG 415
            K R    I+GDP       GP +   Q +KVL YI  G    ATL  GG   + +   G
Sbjct: 312 LKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEG 371
Query: 416 YFVQPTVFSDVT 427
            +VQPTVF+DVT
Sbjct: 372 AYVQPTVFADVT 383

>pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503

Iteration: 1
 Score =  254 bits (649), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 144/380 (37%), Positives = 215/380 (56%), Gaps = 13/380 (3%)
Query: 61  LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGP---WPKMT 117
            ING +      K  PV +P T  +I ++     ED+D AVA A+ A        W   +
Sbjct: 11  FINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATAS 70
Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
              R+R +   A  + +   ELA LE+ + GKP  ++   ++  V     YYA  A+K+ 
Sbjct: 71  GAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEA-AWDIDDVAGCFEYYADLAEKLD 129
Query: 178 G-----LTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAE 232
                 +++P D  +    L EPIGV G I PWN+P+L+ TWKVAPAL  G   +LK +E
Sbjct: 130 ARQKAPVSLPMD-TFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSE 188
Query: 233 QTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE 292
              LT L + ++  E GLPPGVLN+++G GP AGA LA+H DVDK++FTG   TG  +  
Sbjct: 189 LASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIMT 248
Query: 293 LAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVY 352
            AA+  +KPV+LELGGKSP ++F+D D+D+A E A F  F+  GQ C A SR  +HE + 
Sbjct: 249 AAAQL-VKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIA 307
Query: 353 DEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG 412
            EF+ +         + DP + G   GP +   Q++K+L+++ +     AT+  GG R  
Sbjct: 308 TEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPE 367
Query: 413 N--RGYFVQPTVFSDVTVSF 430
           +  +G+F++PT+ +DVT + 
Sbjct: 368 HLKKGFFIEPTIITDVTTNM 387

>pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503

Iteration: 1
 Score =  253 bits (646), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 150/388 (38%), Positives = 219/388 (56%), Gaps = 13/388 (3%)
Query: 53  VQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG- 111
           + +S  +  I+G++      K  P  +P T  +I ++     ED+D AV  A++A     
Sbjct: 3   ITVSSRQLFIDGEWRVPILNKRIPNINPSTENIIGDIPAATKEDVDLAVDAAKRAISRKN 62
Query: 112 --PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYY 169
              W   +   R+R +   A  I++  +EL  LE+ + GKP  ++L +++  VV    YY
Sbjct: 63  GRDWSAASGSLRARYLRAIAAKIKEKKDELGKLESIDCGKPLEEAL-ADLDDVVACFEYY 121
Query: 170 AGWADKIHG-----LTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGN 224
           AG A+++       +++P D  +    L EPIGV   I PWN+P L+ TWK+APAL  G 
Sbjct: 122 AGLAEELDSKQKAPISLPMD-TFKSYILKEPIGVVALITPWNYPFLMATWKIAPALAAGC 180
Query: 225 TIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHC 284
             +LK +E   +T L + ++  E GLP GVLN+V+G G  AGA+LASH DVDK+SFTG  
Sbjct: 181 AAILKPSELASVTCLELGEICKEVGLPRGVLNIVTGLGHEAGASLASHPDVDKISFTGSS 240
Query: 285 DTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSR 344
            TG  +   AA+  +KPV+LELGGKSP ++F+D D+D+  E   F  F+  GQ C A SR
Sbjct: 241 ATGSKIMTTAAQL-VKPVSLELGGKSPIVVFEDVDLDKVAEWTVFGCFFTNGQICSATSR 299
Query: 345 TYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATL 404
             VHE +  EFV+K    A    + DP + G   GP +   Q++KVL  I S     AT+
Sbjct: 300 LIVHESIAVEFVDKLVKWAENIKISDPLEEGCRLGPIVSEAQYKKVLNCISSAKSEGATI 359
Query: 405 ECGGDRLGN--RGYFVQPTVFSDVTVSF 430
             GG R  +  +GYFV+PT+ +DVT S 
Sbjct: 360 LTGGRRPEHLKKGYFVEPTIITDVTTSM 387

>pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520

Iteration: 1
 Score =  251 bits (642), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 214/377 (56%), Gaps = 7/377 (1%)
Query: 59  KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
           +  I+G++V++A+  T  + +P   EVI  V+EG  ED +RA+  AR+AF+ G W + T 
Sbjct: 34  RQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEWSQETA 93
Query: 119 YERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG 178
             R + +   AD I+++ E LA LET + GK   +S  +++  +  +  Y+AG ADK  G
Sbjct: 94  ETRGKKVRAIADKIKEHREALARLETLDTGKTLEESY-ADMDDIHNVFMYFAGLADKDGG 152
Query: 179 LTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLT 237
             +     +   + + EP+GV  QI PWN+PLL  +WK+APAL  G ++V+K +E TPLT
Sbjct: 153 EMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLT 212
Query: 238 ALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKS 297
            + V +L  E G P G +N++ G G   G  ++ H +VD +SFTG  +TGK + + AA +
Sbjct: 213 TIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAA-N 271
Query: 298 NLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVE 357
           N+  + LELGGK+P IIFDDAD + AV+ A    +++ GQ C AGSR  V   + D+F +
Sbjct: 272 NVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQ 331
Query: 358 KAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG----N 413
               R  +  +G+ F +  E GP I  E   K+  Y+       AT+  GG R       
Sbjct: 332 ALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLK 391
Query: 414 RGYFVQPTVFSDVTVSF 430
            G F +PTV ++   S 
Sbjct: 392 DGLFFEPTVITNCDTSM 408

>pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520

Iteration: 1
 Score =  246 bits (629), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 149/389 (38%), Positives = 221/389 (56%), Gaps = 13/389 (3%)
Query: 52  PVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG 111
           P  +   +  ++G++   A G+  PV +P T   I  +  G AED+D AVA AR A    
Sbjct: 19  PAMVPLRQLFVDGEWRPPAQGRRLPVVNPTTEAHIGEIPAGTAEDVDAAVAAARAALKRN 78
Query: 112 ---PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHY 168
               W +     R++ +   A  + +   ELA LE  + GKPY ++   ++  V     Y
Sbjct: 79  RGRDWARAPGAVRAKYLRAIAAKVIERKPELAKLEALDCGKPYDEA-AWDMDDVAGCFEY 137
Query: 169 YAGWADKIHG-----LTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCG 223
           +A  A+ +       +++P +  +      EPIGV G I PWN+PLL+ TWK+APAL  G
Sbjct: 138 FADQAEALDKRQNSPVSLPME-TFKCHLRREPIGVVGLITPWNYPLLMATWKIAPALAAG 196
Query: 224 NTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGH 283
            T VLK +E   +T L +A +  E GLP GVLN+V+G GP AGA L++H DVDK++FTG 
Sbjct: 197 CTAVLKPSELASVTCLELADICKEVGLPSGVLNIVTGLGPDAGAPLSAHPDVDKVAFTGS 256
Query: 284 CDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGS 343
            +TGK +   AA   +KPVTLELGGKSP ++FDD D+D+AVE   F  F+  GQ C A S
Sbjct: 257 FETGKKIMASAAPM-VKPVTLELGGKSPIVVFDDVDIDKAVEWTLFGCFWTNGQICSATS 315
Query: 344 RTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNAT 403
           R  +H ++  +F E+  A A    V DP + G   GP +   Q++K+ ++I +     AT
Sbjct: 316 RLLIHTKIAKKFNERMVAWAKNIKVSDPLEEGCRLGPVVSEGQYEKIKKFISNAKSQGAT 375
Query: 404 LECGGDRLGN--RGYFVQPTVFSDVTVSF 430
           +  GG R  +  +G+F++PT+ +D+T S 
Sbjct: 376 ILTGGVRPAHLEKGFFIEPTIITDITTSM 404

>pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517

Iteration: 1
 Score =  246 bits (628), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 145/392 (36%), Positives = 215/392 (54%), Gaps = 9/392 (2%)
Query: 46  EEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATAR 105
           ++P    V I   +  I G++ +       P+ +P T E+I ++    AED+D AV  AR
Sbjct: 12  QDPANRNVPIPRRQLYIGGEWREPVKKNRIPIINPATEEIIGDIPAATAEDVDIAVEAAR 71
Query: 106 KAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRL 165
           KA     W   T  +R++ +   A  + +    LA LE+ ++GK   +S  +++  V   
Sbjct: 72  KAIARDDWGSTTGAQRAKYLRAIAAKVLEKKSVLATLESLDSGKTLYES-AADMDDVAGC 130
Query: 166 LHYYAGWADKIHGLTVP----GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALT 221
             YYAG A+ +    +        +Y    L EP+GV G I PWN+PLL+  WKVAPAL 
Sbjct: 131 FEYYAGLAEALDSRRMTPVNLNSDSYKSYVLREPLGVVGLITPWNYPLLMAIWKVAPALA 190
Query: 222 CGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFT 281
            G   +LK +E   +T L + ++  E GLP G LN+++G GP AG  LASH  VDK+SFT
Sbjct: 191 AGCAAILKPSELASITCLELGEICREIGLPSGALNILTGLGPEAGGPLASHPHVDKISFT 250
Query: 282 GHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDAD-VDQAVELAHFALFYNQGQCCC 340
           G   TG  +   AA+  +KPV+LELGGKSP ++FDD D +D A E   F +F N GQ C 
Sbjct: 251 GSGPTGSKIMTAAAQL-VKPVSLELGGKSPIVVFDDIDNLDIAAEWTLFGIFANTGQVCS 309
Query: 341 AGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIES 400
           A SR  V E +   F+++         + DP +   + GP +   Q++KVL++I +    
Sbjct: 310 ATSRLIVQENIASAFMDRLLKWTKNIKISDPLEEDCKLGPVVSAGQYEKVLKFISNAKSE 369
Query: 401 NATLECGGDRLGN--RGYFVQPTVFSDVTVSF 430
            AT+ CGG+R  +  +GY+VQPT+ +DV  S 
Sbjct: 370 GATILCGGERPQHLKKGYYVQPTIITDVNTSM 401

>pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514

Iteration: 1
 Score =  244 bits (623), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 144/392 (36%), Positives = 214/392 (54%), Gaps = 9/392 (2%)
Query: 46  EEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATAR 105
           ++P    V I   +  I G++ +       P+ +P T E+I ++    AED+D AV  AR
Sbjct: 12  QDPANRNVPIPRRQLYIGGEWREPVKKNRIPIINPATEEIIGDIPAATAEDVDIAVEAAR 71
Query: 106 KAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRL 165
           KA     W   T  +R++ +   A  + +    LA LE+ ++GK   +S  +++  V   
Sbjct: 72  KAIARDDWGSTTGAQRAKYLRAIAAKVLEKKSVLATLESLDSGKTLYES-AADMDDVAGC 130
Query: 166 LHYYAGWADKIHGLTVP----GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALT 221
             YYAG A+ +    +        +Y    L EP+GV G I PWN+PLL+  WKVAPAL 
Sbjct: 131 FEYYAGLAEALDSRRMTPVNLNSDSYKSYVLREPLGVVGLITPWNYPLLMAIWKVAPALA 190
Query: 222 CGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFT 281
            G   +LK +E   +T L + ++  E GLP G LN+++G GP AG  LASH  VDK+SFT
Sbjct: 191 AGCAAILKPSELASITCLELGEICREIGLPSGALNILTGLGPEAGGPLASHPHVDKISFT 250
Query: 282 GHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDAD-VDQAVELAHFALFYNQGQCCC 340
           G   TG  +   AA+  +KPV+L LGGKSP ++FDD D +D A E   F +F N GQ C 
Sbjct: 251 GSGPTGSKIMTAAAQL-VKPVSLALGGKSPIVVFDDIDNLDIAAEWTLFGIFANTGQVCS 309
Query: 341 AGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIES 400
           A SR  V E +   F+++         + DP +   + GP +   Q++KVL++I +    
Sbjct: 310 ATSRLIVQENIASAFMDRLLKWTKNIKISDPLEEDCKLGPVVSAGQYEKVLKFISNAKSE 369
Query: 401 NATLECGGDRLGN--RGYFVQPTVFSDVTVSF 430
            AT+ CGG+R  +  +GY+VQPT+ +DV  S 
Sbjct: 370 GATILCGGERPQHLKKGYYVQPTIITDVNTSM 401

>pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528

Iteration: 1
 Score =  244 bits (622), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 157/375 (41%), Positives = 219/375 (58%), Gaps = 5/375 (1%)
Query: 56  SYTKNLINGQFVDAASGKTFPVYDPRTA-EVIANVAEGDAEDIDRAVATARKAFDEGPWP 114
           S  + L++G+ VDAASG T     P  A EV+    E  A+D+ +AVA ARKAFD GPWP
Sbjct: 21  SRYQXLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWP 80
Query: 115 KMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWAD 174
           + +  ERSR+  + ADLI    EELA +E+   GKP  Q+ + E+     L  Y AG A 
Sbjct: 81  RXSGAERSRLXFKVADLILARQEELALIESLEVGKPIAQA-RGEIGFCADLWSYAAGQAR 139
Query: 175 KIHGLTVPGDGNYHIQ-TLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQ 233
            + G T    G+  +   L EP+GV G I PWNFP ++ + +V  A+  G T+VLK +E 
Sbjct: 140 ALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEF 199
Query: 234 TPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQEL 293
           T  T++ +A+L  EAG+P GV NVV+GYG  AG  LA   +VD ++FTG    G  + E+
Sbjct: 200 TSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDXVAFTGSVRVGTKLGEI 259
Query: 294 AAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYD 353
           AA++ +K V LELGGK P I+F DAD+D A +   + +++N GQCC +GSR  V E + D
Sbjct: 260 AART-VKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRD 318
Query: 354 EFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGN 413
              E+    + +   GDP     + G  I     +KV  Y+ +GI S A L  GG+R+G 
Sbjct: 319 ALXERLLDISRKVAFGDPLNERTKIGAXISEAHAEKVHSYVTAGITSGAELLLGGERIGR 378
Query: 414 R-GYFVQPTVFSDVT 427
             G +  PTVF+ VT
Sbjct: 379 EAGLYYAPTVFAGVT 393

>pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase From Burkholderia Pseudomallei, Part 1 Of 2 Length = 484

Iteration: 1
 Score =  230 bits (587), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 148/388 (38%), Positives = 204/388 (52%), Gaps = 11/388 (2%)
Query: 62  INGQFVDAASGKTFPVYDPRTAEVIANVAE-GDAEDIDRAVATARKAFDEGPWPKMTPYE 120
           I G++  A S  TF V+DP T E +  V + G AE      A          W   T  E
Sbjct: 17  IGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAG---WRMKTAKE 73
Query: 121 RSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLT 180
           R+ I+ R  DL+  N ++LA + T   GKP  ++ K E+      + ++A    ++ G T
Sbjct: 74  RAAILRRWFDLVIANSDDLALILTTEQGKPLAEA-KGEIAYAASFIEWFAEEGKRVAGDT 132
Query: 181 VPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239
           +P  D N  I  + EPIGV   I PWNFP  +   KV PAL  G  IV+K AE TP +AL
Sbjct: 133 LPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSAL 192
Query: 240 YVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299
            +A L   AG+P GVL+VV G     G  + S+  V KLSFTG    G+++   +A + +
Sbjct: 193 AMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPT-V 251
Query: 300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 359
           K +TLELGG +PFI+FDDAD+D AVE A  + + N GQ C   +R +VHERVYD F +K 
Sbjct: 252 KKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKL 311
Query: 360 KARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQ 419
            A   +  VG   +SG   GP I+    +KV  +I   +   A+L  GG R      F +
Sbjct: 312 AAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFE 371
Query: 420 PTVFS----DVTVSFISLLQFLIPIFSF 443
           PTV +    D+ V+       L P+F F
Sbjct: 372 PTVLTGVKPDMDVAKEETFGPLAPLFRF 399

>pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504

Iteration: 1
 Score =  229 bits (583), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 142/388 (36%), Positives = 212/388 (54%), Gaps = 11/388 (2%)
Query: 61  LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYE 120
           L+NG+++DAA G T  V +P    VI  V       I  A+  + KA     W   T  E
Sbjct: 36  LVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALS--GWAAKTAKE 93
Query: 121 RSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLT 180
           R+ I+ +  DLI  N +++A + T   GKP  ++ + EV      + ++A  A +++G T
Sbjct: 94  RAGILRKWFDLIIANADDIALIMTSEQGKPLAEA-RGEVLYAASFIEWFAEEAKRVYGDT 152
Query: 181 VPGDGN-YHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239
           +P   N   +  + +P+GV   I PWNFP  + T K APAL  G T++++ A+ TPLTAL
Sbjct: 153 IPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTAL 212
Query: 240 YVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299
            +  L  +AG+P GVL +V+G     GA L S+  V KLSFTG  + G+++    A + +
Sbjct: 213 ALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPT-I 271
Query: 300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 359
           K ++LELGG +PFI+FDDAD+D AV+ A  + + N GQ C   +R YV   VYD+F EK 
Sbjct: 272 KRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKL 331
Query: 360 KARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQ 419
            A+     VG+  + GV  GP I+ +   KV  +I   +   A L  GG  LG  G F +
Sbjct: 332 AAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKELG--GLFFE 389
Query: 420 PTVFSDVTVSFISLLQF----LIPIFSF 443
           P + + VT   +   +     L P+F+F
Sbjct: 390 PGILTGVTSDMLVAKEETFGPLAPLFAF 417

>pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 498

Iteration: 1
 Score =  229 bits (583), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 143/377 (37%), Positives = 204/377 (54%), Gaps = 17/377 (4%)
Query: 58  TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
           T+ LI  +F +A +     + +PRT   I ++AE     ID AV  A +AF    W + T
Sbjct: 26  TQLLIGSRF-EAGTEAEEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFV--GWSQTT 82
Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
           P ERS  +L+ AD IEK  +E AALE  N GKP       E+P ++    ++AG    +H
Sbjct: 83  PAERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLH 142
Query: 178 GLTVPGDGNY---HIQTLH-EPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQ 233
               P  G Y   H   +  +PIG+ G I PWN+PL    WK+APA+  GNT+V K +EQ
Sbjct: 143 ---APAAGEYLPGHTSXIRRDPIGIVGSIAPWNYPLXXXAWKLAPAIGGGNTVVFKPSEQ 199
Query: 234 TPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQEL 293
           TPLTAL +A+L  +  LP GV+NV++G G T G AL +H  V  +S TG   TGK V   
Sbjct: 200 TPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGXVSITGDIATGKKVLAA 258
Query: 294 AAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYD 353
           AAK+ +K   LELGGK+P I++ DAD++  V       +YN GQ C A  R Y    +Y+
Sbjct: 259 AAKT-VKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYE 317
Query: 354 EFVEK--AKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYI-RSGIESNATLECGGDR 410
           + V    +    +R  + D  ++  E GP I   Q  +V  ++ R+  + +  +  GG  
Sbjct: 318 KLVADLTSAVSTIRYNLDDDTEN--EIGPLISRRQRDRVASFVERAADQKHIEITTGGRT 375
Query: 411 LGNRGYFVQPTVFSDVT 427
             + G+F QPTV +  T
Sbjct: 376 GSDEGFFFQPTVVAGAT 392

>pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495

Iteration: 1
 Score =  226 bits (576), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 141/371 (38%), Positives = 204/371 (54%), Gaps = 13/371 (3%)
Query: 59  KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
           K LING+ V +  G+  PVY+P T +V+  +AE  AE +D AV  A  AF E  W + TP
Sbjct: 25  KLLINGELV-SGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAE--WGQTTP 81
Query: 119 YERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG 178
             R+  +L+ AD+IE+N +  A LE+ N GKP   +   E+P +V +  ++AG A  ++G
Sbjct: 82  KVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNG 141
Query: 179 LTVPGDGNYHIQTLH-EPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLT 237
           L        H   +  +P+GV   I PWN+PL++  WK+APAL  GN +VLK +E TPLT
Sbjct: 142 LAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLT 201
Query: 238 ALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKS 297
           AL +A+L  +   P GV+N++ G G T G  L  H  V  +S TG   TG+ +    A S
Sbjct: 202 ALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTA-S 259
Query: 298 NLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVE 357
           ++K   +ELGGK+P I+FDDAD++  VE      +YN GQ C A  R Y  + +YD  VE
Sbjct: 260 SIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVE 319
Query: 358 KAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNAT----LECGGDRLGN 413
           K  A       G P     E GP       ++V + +    E+ AT    +  GG++   
Sbjct: 320 KLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVE---EAKATGHIKVITGGEKRKG 376
Query: 414 RGYFVQPTVFS 424
            GY+  PT+ +
Sbjct: 377 NGYYYAPTLLA 387

>pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497

Iteration: 1
 Score =  224 bits (571), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 136/379 (35%), Positives = 205/379 (54%), Gaps = 7/379 (1%)
Query: 51  PPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDE 110
           P   ++  K  ING + D ++     V DP T E  A ++ G   D D+A+  A+KAF  
Sbjct: 19  PGSMLNKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQ- 77
Query: 111 GPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYA 170
             W   +P+ER   + +  ++ EK   ++A   +   G P   +L ++       +  + 
Sbjct: 78  -TWKTTSPHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFI 136
Query: 171 GWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKS 230
               +        +GN      ++ IGV G I PWN+P+   T KV PAL  G T+VLK 
Sbjct: 137 KAYKEFSFQEALIEGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKP 196
Query: 231 AEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIV 290
           +E  PL+A+  A++  EA LP GV N+++G G   G+ L++H D++ +SFTG    GK +
Sbjct: 197 SEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDI 256
Query: 291 QELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHER 350
            + A+ + LK V LELGGK   IIF DAD+D A++      FYN GQ C A +R  V + 
Sbjct: 257 SKNASNT-LKRVCLELGGKGANIIFADADID-ALQRGVRHCFYNSGQSCNAPTRMLVEQA 314
Query: 351 VYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDR 410
           +YD+ ++ AK  A +  VG   ++G   GP +  EQ+ K+   I+SGI+  ATL  GG  
Sbjct: 315 IYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTG 374
Query: 411 L---GNRGYFVQPTVFSDV 426
           L     RGY+V+PTVF+DV
Sbjct: 375 LPMGMERGYYVRPTVFADV 393

>pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478

Iteration: 1
 Score =  220 bits (560), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 143/412 (34%), Positives = 213/412 (51%), Gaps = 27/412 (6%)
Query: 56  SYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPK 115
            YTK  ING++V++ S +T  V +P T EVI  VA+G+  D+D+AV  A   + E  +  
Sbjct: 6   DYTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLE--FRH 63
Query: 116 MTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADK 175
            +  ER  ++ +     E   +++    T   G P   SL   V     L H+ A   D 
Sbjct: 64  TSVKERQALLDKIVKEYENRKDDIVQAITDELGAPL--SLSERVHYQXGLNHFVAA-RDA 120
Query: 176 IHGLTVPGDGNYHIQ-------TLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVL 228
           +         NY  +        + E IGV+G I PWNFP    + K+A A   G+ +VL
Sbjct: 121 LD--------NYEFEERRGDDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVL 172
Query: 229 KSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGK 288
           K +E+TP  A+ +A++F + G+P GV N+V+G G   G  L+ H  V   SFTG   TG 
Sbjct: 173 KPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRXXSFTGSGPTGS 232
Query: 289 IVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVH 348
            + E AAK + K V+LELGGKSP+I+ DD D+ +A +     +  N GQ C AG+R  V 
Sbjct: 233 KIXEKAAK-DFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVP 291
Query: 349 ERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGG 408
            ++ D F+ + K +  +  VG+P + G + GP I  +QF +V  YI  GIE  A L  GG
Sbjct: 292 NKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGG 351
Query: 409 ----DRLGNRGYFVQPTVFSDV-TVSFISLLQFLIPIFSFIILCVVTDCTSI 455
               + L  +GYF +PT+F +V     I+  +   P+ S I    + +   I
Sbjct: 352 PGKPEGL-EKGYFARPTIFINVDNQXTIAQEEIFGPVXSVITYNDLDEAIQI 402

>pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde Dehydrogenase Complexed With Nad+ Length = 495

Iteration: 1
 Score =  219 bits (558), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 156/412 (37%), Positives = 208/412 (50%), Gaps = 25/412 (6%)
Query: 57  YTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKM 116
           Y K  I G++   ++     V  P T E +  V    A D+D AVA AR AFD GPWP  
Sbjct: 8   YDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPST 67
Query: 117 TPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLH--------- 167
            P+ER+ ++  A  ++ +  +    L     G+P         P ++  +H         
Sbjct: 68  PPHERAAVIAAAVKMLAERKDLFTKLLAAETGQP---------PTIIETMHWMGSMGAMN 118
Query: 168 YYAGWADKIHGLTVPGDGNYHIQTL-HEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTI 226
           Y+AG ADK+   T    G+Y    +  EP+GV G IV WN PL L   K+APAL  G TI
Sbjct: 119 YFAGAADKVT-WTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTI 177
Query: 227 VLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDT 286
           VLK A +TPLTA  +A++F E GLP GVL+VV G G   G AL S+ D+D  +FTG    
Sbjct: 178 VLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAV 236
Query: 287 GKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTY 346
           G+ V   AA+  LKP TLELGGKS  II +D D+  A+ +  F+   N GQ C   +R  
Sbjct: 237 GREVGRRAAEM-LKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRIL 295
Query: 347 VHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLEC 406
                YDE V           VG P     + GP I  +Q  +V  YI  GIE  A L C
Sbjct: 296 APRSRYDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVC 355
Query: 407 GGDRLG--NRGYFVQPTVFSDVTVSF-ISLLQFLIPIFSFIILCVVTDCTSI 455
           GG R    + G+F+QPTVF+DV     I+  +   P+ + I      D  +I
Sbjct: 356 GGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAI 407

>pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479

Iteration: 1
 Score =  206 bits (524), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 131/369 (35%), Positives = 193/369 (52%), Gaps = 10/369 (2%)
Query: 62  INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYER 121
           I+GQFV         V +P T  VI+ + +G AED  +A+  A +A  E  W  +   ER
Sbjct: 11  IDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPE--WEALPAIER 68
Query: 122 SRIMLRAADLIEKNMEELAALETWNNGKPYVQSL-KSEVPMVVRLLHYYAGWADKIHGLT 180
           +  + + +  I +   E++AL     GK  +Q L + EV      + Y A WA +  G  
Sbjct: 69  ASWLRKISAGIRERATEISALIVEEGGK--IQQLAEVEVAFTADYIDYMAEWARRYEGEI 126
Query: 181 VPGDG-NYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239
           +  D    +I      +GV   I+PWNFP  L   K+APAL  GNTIV+K +E TP  A+
Sbjct: 127 IQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAI 186
Query: 240 YVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299
             AK+  E GLP GV N+V G G T G  LA +  V  +S TG    G+ +   AAK N+
Sbjct: 187 AFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAK-NI 245
Query: 300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 359
             V LELGGK+P I+ DDAD++ AV+    +   N GQ C    R YV + +YD+FV + 
Sbjct: 246 TKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRL 305
Query: 360 KARAMRRI-VGDPF-KSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYF 417
              AM+ +  G+P  ++ +  GP I+    ++V + +   +E  A +  GG  +  +GY+
Sbjct: 306 -GEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYY 364
Query: 418 VQPTVFSDV 426
             PT+  DV
Sbjct: 365 YPPTLLLDV 373

>pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479

Iteration: 1
 Score =  206 bits (524), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 131/369 (35%), Positives = 193/369 (52%), Gaps = 10/369 (2%)
Query: 62  INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYER 121
           I+GQFV         V +P T  VI+ + +G AED  +A+  A +A  E  W  +   ER
Sbjct: 11  IDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPE--WEALPAIER 68
Query: 122 SRIMLRAADLIEKNMEELAALETWNNGKPYVQSL-KSEVPMVVRLLHYYAGWADKIHGLT 180
           +  + + +  I +   E++AL     GK  +Q L + EV      + Y A WA +  G  
Sbjct: 69  ASWLRKISAGIRERASEISALIVEEGGK--IQQLAEVEVAFTADYIDYMAEWARRYEGEI 126
Query: 181 VPGDG-NYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239
           +  D    +I      +GV   I+PWNFP  L   K+APAL  GNTIV+K +E TP  A+
Sbjct: 127 IQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAI 186
Query: 240 YVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299
             AK+  E GLP GV N+V G G T G  LA +  V  +S TG    G+ +   AAK N+
Sbjct: 187 AFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAK-NI 245
Query: 300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 359
             V LELGGK+P I+ DDAD++ AV+    +   N GQ C    R YV + +YD+FV + 
Sbjct: 246 TKVXLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRL 305
Query: 360 KARAMRRI-VGDPF-KSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYF 417
              AM+ +  G+P  ++ +  GP I+    ++V + +   +E  A +  GG  +  +GY+
Sbjct: 306 -GEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYY 364
Query: 418 VQPTVFSDV 426
             PT+  DV
Sbjct: 365 YPPTLLLDV 373

>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479

Iteration: 1
 Score =  206 bits (524), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 131/369 (35%), Positives = 193/369 (52%), Gaps = 10/369 (2%)
Query: 62  INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYER 121
           I+GQFV         V +P T  VI+ + +G AED  +A+  A +A  E  W  +   ER
Sbjct: 11  IDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPE--WEALPAIER 68
Query: 122 SRIMLRAADLIEKNMEELAALETWNNGKPYVQSL-KSEVPMVVRLLHYYAGWADKIHGLT 180
           +  + + +  I +   E++AL     GK  +Q L + EV      + Y A WA +  G  
Sbjct: 69  ASWLRKISAGIRERASEISALIVEEGGK--IQQLAEVEVAFTADYIDYMAEWARRYEGEI 126
Query: 181 VPGDG-NYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239
           +  D    +I      +GV   I+PWNFP  L   K+APAL  GNTIV+K +E TP  A+
Sbjct: 127 IQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAI 186
Query: 240 YVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299
             AK+  E GLP GV N+V G G T G  LA +  V  +S TG    G+ +   AAK N+
Sbjct: 187 AFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAK-NI 245
Query: 300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 359
             V LELGGK+P I+ DDAD++ AV+    +   N GQ C    R YV + +YD+FV + 
Sbjct: 246 TKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRL 305
Query: 360 KARAMRRI-VGDPF-KSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYF 417
              AM+ +  G+P  ++ +  GP I+    ++V + +   +E  A +  GG  +  +GY+
Sbjct: 306 -GEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYY 364
Query: 418 VQPTVFSDV 426
             PT+  DV
Sbjct: 365 YPPTLLLDV 373

>pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh Length = 487

Iteration: 1
 Score =  206 bits (523), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 138/377 (36%), Positives = 212/377 (56%), Gaps = 15/377 (3%)
Query: 58  TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
           T + + G+++ AA+  TFPV DP +   +  VA+    +   AV  A +AF    W +++
Sbjct: 13  TDSFVGGRWLPAAA--TFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCR--WREVS 68
Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
             ERS ++ +  +L+ +N ++LA + T  +GKP ++    E+      L +++  A +++
Sbjct: 69  AKERSSLLRKWYNLMIQNKDDLARIITAESGKP-LKEAHGEILYSAFFLEWFSEEARRVY 127
Query: 178 G--LTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTP 235
           G  +  P      +  L +PIGVA  I PWNFP  + T KV  AL  G T+V+K AE TP
Sbjct: 128 GDIIHTPAKDRRAL-VLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTP 186
Query: 236 LTALYVAKLFHEAGLPPGVLNVVSGYGPTA---GAALASHMDVDKLSFTGHCDTGKIVQE 292
            +AL +A+L  +AG+P GV NV+      A   G A+ +   V K+SFTG   TGKI+  
Sbjct: 187 FSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLH 246
Query: 293 LAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVY 352
            AA S +K V++ELGG +PFI+FD A+VDQAV  A  + F N GQ C   ++  V   ++
Sbjct: 247 HAANS-VKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIH 305
Query: 353 DEFVEKAKARAMRR--IVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDR 410
           D FV KA A AM++   VG+ F+ G  QGP I+ +  +KV + +   +   AT+  GG R
Sbjct: 306 DAFV-KAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKR 364
Query: 411 LGNRGYFVQPTVFSDVT 427
                 F +PT+  +VT
Sbjct: 365 HQLGKNFFEPTLLCNVT 381

>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538

Iteration: 1
 Score =  202 bits (513), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 127/394 (32%), Positives = 207/394 (52%), Gaps = 20/394 (5%)
Query: 61  LINGQFVDAASGKTFPVYDP-RTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPY 119
           +ING+ V   +      ++P R  +++ +V++ + +  ++A+ +A +AF    W  + P 
Sbjct: 41  IINGERV--TTEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQ--TWRNVNPE 96
Query: 120 ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG- 178
           ER+ I+++AA +I +   E +A      GKP+ ++  ++    +  L YYA    +++  
Sbjct: 97  ERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKEA-DADTAEAIDFLEYYARQMIELNRG 155
Query: 179 ---LTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTP 235
              L+ PG+ N +  T   P+GV   I PWNF L +        +  GNT+VLK A  TP
Sbjct: 156 KEILSRPGEQNRYFYT---PMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTP 212
Query: 236 LTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA 295
           + A    ++  +AGLP GV+N V G G   G  L  H     ++FTG  D G  + E AA
Sbjct: 213 VVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAA 272
Query: 296 -----KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHER 350
                +++LK V +E+GGK   ++  DAD+D A E    + F   GQ C AGSR  +H+ 
Sbjct: 273 VVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKD 332
Query: 351 VYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDR 410
           VYDE +EK  A A    VGDP       GP ID + F+K++ YI  G +    L  GG+ 
Sbjct: 333 VYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIG-KKEGRLMTGGEG 391
Query: 411 LGNRGYFVQPTVFSDVTVSFISLLQFLI-PIFSF 443
             + G+F+QPT+ +D+    + + + +  P+ +F
Sbjct: 392 DSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAF 425

>pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh Length = 487

Iteration: 1
 Score =  201 bits (512), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 137/377 (36%), Positives = 211/377 (55%), Gaps = 15/377 (3%)
Query: 58  TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
           T + + G+++ AA+  TFPV DP +   +  VA+    +   AV  A +AF    W +++
Sbjct: 13  TDSFVGGRWLPAAA--TFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCR--WREVS 68
Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
             ERS ++ +  +L+ +N ++LA + T  +GKP ++    E+      L +++  A +++
Sbjct: 69  AKERSSLLRKWYNLMIQNKDDLARIITAESGKP-LKEAHGEILYSAFFLEWFSEEARRVY 127
Query: 178 G--LTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTP 235
           G  +  P      +  L +PIGVA  I PWNFP  + T KV  AL  G T+V+K AE TP
Sbjct: 128 GDIIHTPAKDRRAL-VLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTP 186
Query: 236 LTALYVAKLFHEAGLPPGVLNVVSGYGPTA---GAALASHMDVDKLSFTGHCDTGKIVQE 292
            +AL +A+L  +AG+P GV NV+      A   G A+ +   V K+SFTG   TGKI+  
Sbjct: 187 FSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLH 246
Query: 293 LAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVY 352
            AA S +K V++ELGG +PFI+FD A+VDQAV  A  + F N GQ     ++  V   ++
Sbjct: 247 HAANS-VKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTAVCSNQFLVQRGIH 305
Query: 353 DEFVEKAKARAMRR--IVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDR 410
           D FV KA A AM++   VG+ F+ G  QGP I+ +  +KV + +   +   AT+  GG R
Sbjct: 306 DAFV-KAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKR 364
Query: 411 LGNRGYFVQPTVFSDVT 427
                 F +PT+  +VT
Sbjct: 365 HQLGKNFFEPTLLCNVT 381

>pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486

Iteration: 1
 Score =  196 bits (497), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 132/394 (33%), Positives = 201/394 (51%), Gaps = 8/394 (2%)
Query: 54  QISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPW 113
           +I   KN ING++V++ + +   V +P T EV+  V     EDID A  TA +AF    W
Sbjct: 2   EIRKLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFK--TW 59
Query: 114 PKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWA 173
            K+    R+RI+     L+ ++ EELA L T  NGK   ++L  EV   +  + + AG  
Sbjct: 60  SKVAVPRRARILFNFQQLLSQHKEELAHLITIENGKNTKEAL-GEVGRGIENVEFAAGAP 118
Query: 174 DKIHGLTVPGDG-NYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAE 232
             + G ++     +        PIGV G I P+NFP+++  W    A+  GNT +LK +E
Sbjct: 119 SLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSE 178
Query: 233 QTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE 292
           +TPL    + +LF +AGLP GV NVV G        L  H ++  +SF G    G+ V +
Sbjct: 179 RTPLLTEKLVELFEKAGLPKGVFNVVYGAHDVVNGIL-EHPEIKAISFVGSKPVGEYVYK 237
Query: 293 LAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVY 352
             ++ NLK V    G K+  I+ +DA+++  V     A F + G+ C A +   V E + 
Sbjct: 238 KGSE-NLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIA 296
Query: 353 DEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGG-DRL 411
           DEF+ K + +     +G+    GV  GP I  +  ++ L YI  G+E  A L C G + +
Sbjct: 297 DEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENV 356
Query: 412 GNRGYFVQPTVFSDVTVSF-ISLLQFLIPIFSFI 444
            + GYFV PT+F +VT    I   +   P+ S I
Sbjct: 357 SDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVI 390

>pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From Pseudoalteromonas Atlantica T6c Length = 497

Iteration: 1
 Score =  190 bits (482), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 126/372 (33%), Positives = 182/372 (48%), Gaps = 9/372 (2%)
Query: 60  NLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPY 119
           N I GQ+V +    T  +  P T +VI  +  G   D + A+  A+ A     W K+T  
Sbjct: 15  NFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKA--WAKLTAR 72
Query: 120 ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL 179
            R  ++   A+ I +N   LA +     GK  +   + EV +    + Y    A  I G 
Sbjct: 73  TRQNMLRTFANKIRENKHILAPMLVAEQGK-LLSVAEMEVDVTATFIDYGCDNALTIEGD 131
Query: 180 TVPGDGNYHIQTLHE-PIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 238
            +P D       +H+ P GV   I  WNFPL L   K+ PAL  GNT+VLK  ++TPL  
Sbjct: 132 ILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLAT 191
Query: 239 LYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN 298
             + ++  EAGLP GVLNV++G G   G  L        ++ TG    GK + + +A+  
Sbjct: 192 TELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEY- 250
Query: 299 LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 358
           + PV LELGGK+P ++ DDAD+D+A E A +  F N GQ C    R YVH  VYDEF+ K
Sbjct: 251 MTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAK 310
Query: 359 AKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGY-- 416
                    VGDP  +  + GP+ +  +   +   +   I+  AT+  GG      G+  
Sbjct: 311 FLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEG 370
Query: 417 --FVQPTVFSDV 426
             + +PTV  DV
Sbjct: 371 GCWYEPTVLVDV 382

>pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde Dehydrogenase From Corynebacterium Glutamicum Length = 508

Iteration: 1
 Score =  187 bits (474), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 141/400 (35%), Positives = 200/400 (50%), Gaps = 22/400 (5%)
Query: 55  ISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWP 114
           I  TK+LI GQ+V+  S +     +P    VIA   +    D+D A   A+KA  E  W 
Sbjct: 10  IDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQAE--WA 67
Query: 115 KMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWAD 174
                ERS I+ RAA+L+E++ EE+       +G    ++   E+ +   +    A +  
Sbjct: 68  ATPAAERSAIIYRAAELLEEHREEIVEWLIKESGSTRSKA-NLEITLAGNITKESASFPG 126
Query: 175 KIHGL----TVPGDGN--YHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVL 228
           ++HG       PG  N  Y +       GV G I PWNFPL L    VAPAL  GN +V+
Sbjct: 127 RVHGRISPSNTPGKENRVYRVAK-----GVVGVISPWNFPLNLSIRSVAPALAVGNAVVI 181
Query: 229 KSAEQTPLTALYV-AKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTG 287
           K A  TP+T   + A++F EAG+P GV++ V+G G   G    +H     +SFTG    G
Sbjct: 182 KPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVG 241
Query: 288 KIVQELAAKSN-LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTY 346
           + V ELA     +K V LELGG +PF++  DAD+D A + A    F +QGQ C + +R  
Sbjct: 242 RRVGELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVI 301
Query: 347 VHERVYDEFVEKAKARAMRRI-VGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLE 405
           V   V+DEF+EK    A++ I  GDP   G   GP I+  Q   +   I    +  AT++
Sbjct: 302 VDAAVHDEFLEKF-VEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQ 360
Query: 406 CGGDRLGNRGYFVQPTVFSDVTVSF-ISLLQFLIPIFSFI 444
             G      G  V P VFSDVT    I+  +   P+ S +
Sbjct: 361 VEGPI---EGRLVHPHVFSDVTSDMEIAREEIFGPLISVL 397

>pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538

Iteration: 1
 Score =  186 bits (472), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 113/349 (32%), Positives = 176/349 (50%), Gaps = 10/349 (2%)
Query: 84  EVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALE 143
           EV+  V++   +  ++A+  A KAF+   W    P ER+ ++ RA   + +   E +AL 
Sbjct: 63  EVVGTVSKATQDHAEKAIQAAAKAFE--TWRYTDPEERAAVLFRAVAKVRRKKHEFSALL 120
Query: 144 TWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKI-HGLTVPGDGNYHIQTLHEPIGVAGQI 202
               GKP+ ++  ++    +  + YYA    ++  G  V        Q ++ P GV   I
Sbjct: 121 VKEAGKPWNEA-DADTAEAIDFMEYYARQMIELAKGKPVNSREGERNQYVYTPTGVTVVI 179
Query: 203 VPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYG 262
            PWNF   +        +  GNT+VLK A   P+ A    ++  E+GLP GV+N V G G
Sbjct: 180 PPWNFLFAIMAGTTVAPIVTGNTVVLKPASAAPVIAAKFVEVLEESGLPKGVVNFVPGSG 239
Query: 263 PTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK-----SNLKPVTLELGGKSPFIIFDD 317
              G  L  H     ++FTG  + G  + E AAK     ++LK V  E+GGK   ++ +D
Sbjct: 240 AEVGDYLVDHPKTSIITFTGSREVGTRIFERAAKVQPGQTHLKQVIAEMGGKDTVVVDED 299
Query: 318 ADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVE 377
            D++ A +    + F   GQ C AGSR  VHE+VYDE +++       + VG+P  + V 
Sbjct: 300 CDIELAAQSIFTSAFGFAGQKCSAGSRAVVHEKVYDEVLKRVIEITESKKVGEPDSADVY 359
Query: 378 QGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDV 426
            GP ID   F K++ YI  G E    L  GG    ++GYF++PT+F+D+
Sbjct: 360 MGPVIDQASFNKIMDYIEIGKEE-GRLVSGGKGDDSKGYFIEPTIFADL 407

>pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter Aquaeolei Length = 506

Iteration: 1
 Score =  182 bits (461), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 131/370 (35%), Positives = 191/370 (51%), Gaps = 12/370 (3%)
Query: 62  INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFD-EGPWPKMTPYE 120
           I G++ D+A G TF VY+P T  VIA V     ED+  AV   + A     PWP  T   
Sbjct: 16  IGGRWKDSAGGATFDVYNPATGSVIAKVPSXPEEDVVAAVEAGQSALRLTNPWPIET--- 72
Query: 121 RSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLT 180
           R + +    D +++N EE+  +    +GKP+ ++ + EV        Y A     +   T
Sbjct: 73  RRKWLEDIRDGLKENREEIGRILCXEHGKPWKEA-QGEVDYAAGFFDYCAKHISALDSHT 131
Query: 181 VPGDGNYHIQTLH-EPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239
           +P        T+H  P+GV G IVPWNFP+     K++ AL  G   V+K A +TPLT +
Sbjct: 132 IPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGXIAKKLSAALAAGCPSVIKPASETPLTXI 191
Query: 240 YVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTG-KIVQELAAKSN 298
               +  +  LP G +N+V G     G  L  H DV  LSFTG  + G K++ + A +  
Sbjct: 192 AFFSVXDKLDLPDGXVNLVXGKASVIGKVLCEHKDVPXLSFTGSTEVGRKLIVDTAEQ-- 249
Query: 299 LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 358
           +K + LELGG +PFI+FDDAD++ A +      F   GQ C   +R +VHE+V D F +K
Sbjct: 250 VKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQK 309
Query: 359 AKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGD--RLGNRGY 416
              R  +  VGD    G++ GP I+ + F KV R+++  ++  A+L  G     LG+ G 
Sbjct: 310 LAERVNKXTVGDGXNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGD-GL 368
Query: 417 FVQPTVFSDV 426
           F  PTV   V
Sbjct: 369 FFPPTVVQGV 378

>pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485

Iteration: 1
 Score =  180 bits (456), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/393 (31%), Positives = 193/393 (49%), Gaps = 11/393 (2%)
Query: 56  SYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPK 115
           +  K+ ING++    SG+T  + +P    VI   +    + ++ A   A+KA  E  W K
Sbjct: 5   TLNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKE--WAK 62
Query: 116 MTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADK 175
            T  +R  ++ +A   + +N +++  +     G   ++S   E+   + +L     +  +
Sbjct: 63  STTEDRKAVLQKARGYLHENRDDIIMMIARETGGTIIKS-TIELEQTIAILDEAMTYTGE 121
Query: 176 IHGLT-VPGDGNYHIQTLHE-PIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQ 233
           + G+  VP D       ++  P+GV   I P+NFP+ L    +APA+  GN++V K   Q
Sbjct: 122 LGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQ 181
Query: 234 TPLTA-LYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE 292
           T ++    +AK F  AGLP GVLNV+       G  + ++     +SFTG    G+ + E
Sbjct: 182 TAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGE 241
Query: 293 LAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVY 352
           +A ++  K + LELGG +PF +  DADVD+AV+ A F  F +QGQ C   +R  VH+ VY
Sbjct: 242 IAGRA-FKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVY 300
Query: 353 DEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG 412
           DEFVEK  AR  +   GD        GP I+  Q +K L  I         L   G R+G
Sbjct: 301 DEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKRVG 360
Query: 413 NRGYFVQPTVFSDV-TVSFISLLQFLIPIFSFI 444
           N    + P VF      S I+  +   PI + I
Sbjct: 361 N---VLTPYVFVGADNNSKIAQTELFAPIATII 390

>pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase Length = 516

Iteration: 1
 Score =  179 bits (455), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 115/343 (33%), Positives = 180/343 (52%), Gaps = 20/343 (5%)
Query: 113 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGW 172
           WP+    +RSR++L+AA L+ +   EL A   +  GK +V++  ++V   +  + YYA  
Sbjct: 93  WPQE---DRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEA-SADVAEAIDFIEYYARA 148
Query: 173 ADK-----IHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIV 227
           A +     +  +  PG+ N   ++ + P+G    I PWNFP+ +FT  +   +  GNT++
Sbjct: 149 ALRYRYPAVEVVPYPGEDN---ESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVI 205
Query: 228 LKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTG 287
            K AE   +    V ++FHEAG PPGV+N + G G   GA L  H  +  ++FTG  + G
Sbjct: 206 AKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVG 265
Query: 288 KIVQELAAK-----SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAG 342
             + E A +     +  K   +E GGK+  I+ + AD D A E    + +  QGQ C A 
Sbjct: 266 LKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAA 325
Query: 343 SRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNA 402
           SR  + +  Y+  +E+   RA R  VG P +   + GP +  EQ +KVL YI  G ++  
Sbjct: 326 SRLILTQGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIG-KNEG 383
Query: 403 TLECGGDRLGNRGYFVQPTVFSDV-TVSFISLLQFLIPIFSFI 444
            L  GG RL   GYF+ PTVF++V   + I+  +   P+ S I
Sbjct: 384 QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVI 426

>pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nad. Length = 516

Iteration: 1
 Score =  179 bits (453), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 115/343 (33%), Positives = 179/343 (52%), Gaps = 20/343 (5%)
Query: 113 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGW 172
           WP+    +RSR++L+AA L+ +   EL A   +  GK +V++  ++V   +  + YYA  
Sbjct: 93  WPQE---DRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEA-SADVAEAIDFIEYYARA 148
Query: 173 ADK-----IHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIV 227
           A +     +  +  PG+ N   ++ + P+G    I PWNFP+ +FT  +   +  GNT++
Sbjct: 149 ALRYRYPAVEVVPYPGEDN---ESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVI 205
Query: 228 LKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTG 287
            K AE   +    V ++FHEAG PPGV+N + G G   GA L  H  +  ++FTG  + G
Sbjct: 206 AKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVG 265
Query: 288 KIVQELAAK-----SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAG 342
             + E A +     +  K   +E GGK   I+ + AD D A E    + +  QGQ C A 
Sbjct: 266 LKIYEAAGRLAPGQTWFKRAYVETGGKDAIIVDETADFDLAAEGVVVSAYGFQGQKCSAA 325
Query: 343 SRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNA 402
           SR  + +  Y+  +E+   RA R  VG P +   + GP +  EQ +KVL YI  G ++  
Sbjct: 326 SRLILTQGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIG-KNEG 383
Query: 403 TLECGGDRLGNRGYFVQPTVFSDV-TVSFISLLQFLIPIFSFI 444
            L  GG RL   GYF+ PTVF++V   + I+  +   P+ S I
Sbjct: 384 QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVI 426

>pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nadh Length = 516

Iteration: 1
 Score =  175 bits (443), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 114/343 (33%), Positives = 178/343 (51%), Gaps = 20/343 (5%)
Query: 113 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGW 172
           WP+    +RSR++L+AA L+ +   EL A   +  GK +V++  ++V   +  + YYA  
Sbjct: 93  WPQE---DRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEA-SADVAEAIDFIEYYARA 148
Query: 173 ADK-----IHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIV 227
           A +     +  +  PG+ N   ++ + P+G    I PWNFP+ +FT  +   +  GNT++
Sbjct: 149 ALRYRYPAVEVVPYPGEDN---ESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVI 205
Query: 228 LKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTG 287
            K AE   +    V ++FHEAG PPGV+N + G G   GA L  H  +  ++FTG  + G
Sbjct: 206 AKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVG 265
Query: 288 KIVQELAAK-----SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAG 342
             + E A +     +  K   +E GGK   I+ + AD D A E    + +  QGQ   A 
Sbjct: 266 LKIYEAAGRLAPGQTWFKRAYVETGGKDAIIVDETADFDLAAEGVVVSAYGFQGQKXSAA 325
Query: 343 SRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNA 402
           SR  + +  Y+  +E+   RA R  VG P +   + GP +  EQ +KVL YI  G ++  
Sbjct: 326 SRLILTQGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIG-KNEG 383
Query: 403 TLECGGDRLGNRGYFVQPTVFSDV-TVSFISLLQFLIPIFSFI 444
            L  GG RL   GYF+ PTVF++V   + I+  +   P+ S I
Sbjct: 384 QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVI 426

>pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation Of Its Substrate Specificity Length = 510

Iteration: 1
 Score =  166 bits (420), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 124/390 (31%), Positives = 187/390 (47%), Gaps = 24/390 (6%)
Query: 63  NGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERS 122
           NG +    SG+    Y P   E IA V +    + +  V   R+A+    W  +   +R 
Sbjct: 27  NGSW--GGSGEVITSYCPANNEPIARVTQATLAEYEETVQKTREAWKM--WADIPAPKRG 82
Query: 123 RIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP 182
            I+ +  D + K ++ L +L +   GK YV+ +  EV   V +  Y  G +  I G  +P
Sbjct: 83  EIVRQIGDALRKKIKVLGSLVSLEMGKIYVEGV-GEVQEYVDVCDYAVGLSRMIGGPVLP 141
Query: 183 GD--GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALY 240
            +  G+  I+  + P+G+ G I  +NFP+ ++ W  A ALTCGN  + K A  TPLT++ 
Sbjct: 142 SERPGHALIEQWN-PVGLVGIITAFNFPVAVYGWNNAIALTCGNVCLWKGAPTTPLTSVA 200
Query: 241 VAKLFHEA----GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
           V K+  E      LP  + ++  G G   G A+A    VD LSFTG    GK+V  +  +
Sbjct: 201 VTKIVAEVLEQNNLPGAICSMTCG-GADIGTAMAKDERVDLLSFTGSTHVGKMVA-MMVQ 258
Query: 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 356
                  LELGG +  I+F+DAD++  V  A FA     GQ C    R  +HE V+D  V
Sbjct: 259 ERFGRKLLELGGNNAIIVFEDADLNLVVPSAVFASVGTAGQRCTTTRRLMLHESVHDAVV 318
Query: 357 EK-AKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRG 415
           E+ AKA    RI GDP+      GP    +   + L  I    +   TL CGG  +   G
Sbjct: 319 ERIAKAYKQVRI-GDPWDPSTLYGPLHTKQAVDQYLAAIEQAKQQGGTLVCGGKVMDRPG 377
Query: 416 YFVQPTVFSDV--------TVSFISLLQFL 437
            +V+PT+ + +        T +F+ +L  L
Sbjct: 378 NYVEPTIITGLAHDAPIVHTETFVPILYVL 407

>pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475

Iteration: 1
 Score =  165 bits (418), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 112/379 (29%), Positives = 187/379 (49%), Gaps = 20/379 (5%)
Query: 59  KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
           KN +NG++    S     +Y+P +   + +V     E++D   A+A+KA  +  W  ++ 
Sbjct: 6   KNYVNGEW--KLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKA--QPAWRALSY 61
Query: 119 YERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG 178
            ER+  + + AD++ ++ E++ A+ +    K Y +S  SEV     +++Y A    ++ G
Sbjct: 62  IERAAYLHKVADILMRDKEKIGAILSKEVAKGY-KSAVSEVVRTAEIINYAAEEGLRMEG 120
Query: 179 LTVPGDGNYHIQT-------LHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSA 231
             + G G++   +         EP+G+   I P+N+P+ L   K+APAL  GN I  K  
Sbjct: 121 EVLEG-GSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPP 179
Query: 232 EQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQ 291
            Q  ++ L +A+ F EAGLP GV N ++G G   G  +  H  V+ ++FTG    G+ + 
Sbjct: 180 TQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIG 239
Query: 292 ELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERV 351
           ++A    ++P+ LELGGK   I+ +DAD++   +      F   GQ C A  R  V E V
Sbjct: 240 KMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESV 296
Query: 352 YDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRL 411
            DE VEK + + +   +G+P +   +  P ID +    V   I    +  AT      R 
Sbjct: 297 ADELVEKIREKVLALTIGNP-EDDADITPLIDTKSADYVEGLINDANDKGATALTEIKRE 355
Query: 412 GNRGYFVQPTVFSDVTVSF 430
           GN    + P +F  VT   
Sbjct: 356 GN---LICPILFDKVTTDM 371

>pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475

Iteration: 1
 Score =  164 bits (415), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 111/379 (29%), Positives = 187/379 (49%), Gaps = 20/379 (5%)
Query: 59  KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
           KN +NG++    S     +Y+P +   + +V     E++D   A+A+KA  +  W  ++ 
Sbjct: 6   KNYVNGEW--KLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKA--QPAWRALSY 61
Query: 119 YERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG 178
            ER+  + + AD++ ++ E++ A+ +    K Y +S  SEV     +++Y A    ++ G
Sbjct: 62  IERAAYLHKVADILMRDKEKIGAILSKEVAKGY-KSAVSEVVRTAEIINYAAEEGLRMEG 120
Query: 179 LTVPGDGNYHIQT-------LHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSA 231
             + G G++   +         EP+G+   I P+N+P+ L   K+APAL  GN I  K  
Sbjct: 121 EVLEG-GSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPP 179
Query: 232 EQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQ 291
            Q  ++ L +A+ F EAGLP GV N ++G G   G  +  H  V+ ++F+G    G+ + 
Sbjct: 180 TQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFSGSTGIGERIG 239
Query: 292 ELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERV 351
           ++A    ++P+ LELGGK   I+ +DAD++   +      F   GQ C A  R  V E V
Sbjct: 240 KMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESV 296
Query: 352 YDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRL 411
            DE VEK + + +   +G+P +   +  P ID +    V   I    +  AT      R 
Sbjct: 297 ADELVEKIREKVLALTIGNP-EDDADITPLIDTKSADYVEGLINDANDKGATALTEIKRE 355
Query: 412 GNRGYFVQPTVFSDVTVSF 430
           GN    + P +F  VT   
Sbjct: 356 GN---LICPILFDKVTTDM 371

>pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475

Iteration: 1
 Score =  163 bits (412), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/379 (29%), Positives = 186/379 (49%), Gaps = 20/379 (5%)
Query: 59  KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
           KN +NG++    S     +Y+P +   + +V     E++D   A+A+KA  +  W  ++ 
Sbjct: 6   KNYVNGEW--KLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKA--QPAWRALSY 61
Query: 119 YERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG 178
            ER+  + + AD++ ++ E++ A+ +    K Y +S  SEV     +++Y A    ++ G
Sbjct: 62  IERAAYLHKVADILMRDKEKIGAILSKEVAKGY-KSAVSEVVRTAEIINYAAEEGLRMEG 120
Query: 179 LTVPGDGNYHIQT-------LHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSA 231
             + G G++   +         EP+G+   I P+N+P+ L   K+APAL  GN I  K  
Sbjct: 121 EVLEG-GSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPP 179
Query: 232 EQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQ 291
            Q  ++ L +A+ F EAGLP GV N ++G G   G  +  H  V+ ++FTG    G+ + 
Sbjct: 180 TQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIG 239
Query: 292 ELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERV 351
           ++A    ++P+ L LGGK   I+ +DAD++   +      F   GQ C A  R  V E V
Sbjct: 240 KMAG---MRPIMLALGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESV 296
Query: 352 YDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRL 411
            DE VEK + + +   +G+P +   +  P ID +    V   I    +  AT      R 
Sbjct: 297 ADELVEKIREKVLALTIGNP-EDDADITPLIDTKSADYVEGLINDANDKGATALTEIKRE 355
Query: 412 GNRGYFVQPTVFSDVTVSF 430
           GN    + P +F  VT   
Sbjct: 356 GN---LICPILFDKVTTDM 371

>pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475

Iteration: 1
 Score =  161 bits (408), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 111/379 (29%), Positives = 186/379 (49%), Gaps = 20/379 (5%)
Query: 59  KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
           KN +NG++    S     +Y+P +   + +V     E++D   A+A+KA  +  W  ++ 
Sbjct: 6   KNYVNGEW--KLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKA--QPAWRALSY 61
Query: 119 YERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG 178
            ER+  + + AD++ ++ E++ A+ +    K Y +S  SEV     +++Y A    ++ G
Sbjct: 62  IERAAYLHKVADILMRDKEKIGAILSKEVAKGY-KSAVSEVVRTAEIINYAAEEGLRMEG 120
Query: 179 LTVPGDGNYHIQT-------LHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSA 231
             + G G++   +         EP+G+   I P+N+P+ L   K+APAL  GN I  K  
Sbjct: 121 EVLEG-GSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPP 179
Query: 232 EQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQ 291
            Q  ++ L +A+ F EAGLP GV N ++G G   G  +  H  V+ ++FTG    G+ + 
Sbjct: 180 TQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIG 239
Query: 292 ELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERV 351
           ++A    ++P+ LELGGK   I+ +DAD++   +      F   GQ   A  R  V E V
Sbjct: 240 KMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRSTAVKRVLVMESV 296
Query: 352 YDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRL 411
            DE VEK + + +   +G+P +   +  P ID +    V   I    +  AT      R 
Sbjct: 297 ADELVEKIREKVLALTIGNP-EDDADITPLIDTKSADYVEGLINDANDKGATALTEIKRE 355
Query: 412 GNRGYFVQPTVFSDVTVSF 430
           GN    + P +F  VT   
Sbjct: 356 GN---LICPILFDKVTTDM 371

>pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Halodurans C-125 Length = 505

Iteration: 1
 Score =  160 bits (405), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 118/373 (31%), Positives = 185/373 (49%), Gaps = 16/373 (4%)
Query: 61  LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYE 120
           L NG++V++ +G+   +  P +   + ++     E+++ A+  A+ A  +  W     +E
Sbjct: 15  LRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDA--QKIWKIRPIHE 72
Query: 121 RSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLT 180
           R  ++   ADL+E+  E +  L      KP  +S   EV     ++ + A  A +++G T
Sbjct: 73  RVDLLYAWADLLEERKEIIGELIMHEVAKPK-KSAIGEVSRTADIIRHTADEALRLNGET 131
Query: 181 VPGD----GNYHIQTL--HEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQT 234
           + GD    G+     L   EP+GV   I P+N+P+ L   K+APAL  GNT+V K A Q 
Sbjct: 132 LKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQG 191
Query: 235 PLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA 294
            L+ + + +   +AG P G++ VV+G G   G  L  H  +D ++FTG   TG+ + E  
Sbjct: 192 SLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISE-- 249
Query: 295 AKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDE 354
            K+ + PV LELGGK P I+ DDAD+           F   GQ C A  R +V + V D+
Sbjct: 250 -KAKMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQ 308
Query: 355 FVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNR 414
            V   K    +  VG P +   +  P ID +    +   I   +E+ ATL  G  R GN 
Sbjct: 309 LVANIKELVEQLTVGSP-EDDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKRQGN- 366
Query: 415 GYFVQPTVFSDVT 427
              + PT+  DVT
Sbjct: 367 --LLSPTLLDDVT 377

>pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486

Iteration: 1
 Score =  156 bits (394), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 171/354 (48%), Gaps = 14/354 (3%)
Query: 61  LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYE 120
            I+G++++    +   V +P + EVI  +     E+   A+ TA K  +      +   +
Sbjct: 3   FIDGKWINR---EDMDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKE--VMKNLPITK 57
Query: 121 RSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLT 180
           R  I++  A  I++  EELA +   + GKP  Q+ + EV   +      A +  +     
Sbjct: 58  RYNILMNIAKQIKEKKEELAKILAIDAGKPIKQA-RVEVERSIGTFKLAAFYVKEHRDEV 116
Query: 181 VPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALY 240
           +P D    I T  EP+G+ G I P+NFPL L   K+APA+  GN IV   + + PL  + 
Sbjct: 117 IPSDDRL-IFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIE 175
Query: 241 VAKLFHEA----GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
           +AK+   A     +P GV N+++G G   G  +  +  V+ +SFTG    G+++ +   K
Sbjct: 176 LAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITK---K 232
Query: 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 356
           +  K + LELGG +P I+  DAD+++AV       F   GQ C +     V E + D+F+
Sbjct: 233 AGFKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFI 292
Query: 357 EKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDR 410
           E    +A    VG+P     + GP I  E  + V + +   I+    L  GG R
Sbjct: 293 EMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR 346

>pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase Length = 500

Iteration: 1
 Score =  151 bits (381), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 112/399 (28%), Positives = 183/399 (45%), Gaps = 24/399 (6%)
Query: 58  TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
            + + NG +     G+    Y P   E IA V +    D +  V  AR+A+    W  + 
Sbjct: 24  NEGVYNGSW--GGRGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWK--IWADIP 79
Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
             +R  I+ +  D + + ++ L +L +   GK  V+ +  EV   V +  Y  G +  I 
Sbjct: 80  APKRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEGV-GEVQEYVDICDYAVGLSRMIG 138
Query: 178 GLTVPGDGNYH-IQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
           G  +P + + H +     P+G+ G I  +NFP+ ++ W  A A+ CGN  + K A  T L
Sbjct: 139 GPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSL 198
Query: 237 TALYV----AKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGK---- 288
            ++ V    AK+  +  LP  + ++  G G   G A+A    V+ LSFTG    GK    
Sbjct: 199 ISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGKQVGL 257
Query: 289 IVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVH 348
           +VQE   +S      LELGG +  I F+DAD+   V  A FA     GQ C    R ++H
Sbjct: 258 MVQERFGRS-----LLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIH 312
Query: 349 ERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGG 408
           E ++DE V + K    +  VG+P+   V  GP    +     L  +    +   T+  GG
Sbjct: 313 ESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGG 372
Query: 409 DRLGNRGYFVQPTVFS----DVTVSFISLLQFLIPIFSF 443
             +   G +V+PT+ +    D +++       ++ +F F
Sbjct: 373 KVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKF 411

>pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501

Iteration: 1
 Score =  149 bits (375), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 115/387 (29%), Positives = 175/387 (45%), Gaps = 17/387 (4%)
Query: 69  AASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWP--KMTPYERSRIML 126
             SG+   V  P     IA V     E+++R   T    F  G W    M   ER  ++ 
Sbjct: 28  GGSGQEIEVKSPIDLATIAKVISPSREEVER---TLDVLFKRGRWSARDMPGTERLAVLR 84
Query: 127 RAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGN 186
           +AAD+IE+N++  A +   N GKP   ++  EV   V  L        KI G  +PGD  
Sbjct: 85  KAADIIERNLDVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGGDYIPGDWT 143
Query: 187 YH-IQT----LHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYV 241
           Y  ++T      EP+GV   I P+N+PL     K+  +   GN +V+K +   PL A   
Sbjct: 144 YDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMA 203
Query: 242 AKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKP 301
            K   +AG PP  + +++  G  A   +A    V  +SFTG  + G+ V ++     +K 
Sbjct: 204 VKALLDAGFPPDAIALLNLPGKEAEKIVADDR-VAAVSFTGSTEVGERVVKVG---GVKQ 259
Query: 302 VTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKA 361
             +ELGG  P I+ +DAD+D A +     ++   GQ C A         VY + VE+   
Sbjct: 260 YVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAK 319
Query: 362 RAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPT 421
           R     VGDP    V+ GP I P    +++  I   +E    +  GG RLG    +VQPT
Sbjct: 320 RLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPT--YVQPT 377
Query: 422 VFSDVTVSFISLLQFLIPIFSFIILCV 448
           +          ++ +   +F+ + L V
Sbjct: 378 LVEAPADRVKDMVLYKREVFAPVALAV 404

>pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501

Iteration: 1
 Score =  148 bits (373), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 115/387 (29%), Positives = 174/387 (44%), Gaps = 17/387 (4%)
Query: 69  AASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWP--KMTPYERSRIML 126
             SG+   V  P     IA V     E+++R   T    F  G W    M   ER  ++ 
Sbjct: 28  GGSGQEIEVKSPIDLATIAKVISPSREEVER---TLDVLFKRGRWSARDMPGTERLAVLR 84
Query: 127 RAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGN 186
           +AAD+IE+N++  A +   N GKP   ++  EV   V  L        KI G  +PGD  
Sbjct: 85  KAADIIERNLDVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGGDYIPGDWT 143
Query: 187 YH-IQT----LHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYV 241
           Y  ++T      EP+GV   I P+N+PL     K+  +   GN +V+K +   PL A   
Sbjct: 144 YDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMA 203
Query: 242 AKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKP 301
            K   +AG PP  + +++  G  A   +A    V  +SFTG  + G+ V ++     +K 
Sbjct: 204 VKALLDAGFPPDAIALLNLPGKEAEKIVADDR-VAAVSFTGSTEVGERVVKVG---GVKQ 259
Query: 302 VTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKA 361
             +ELGG  P I+ +DAD+D A +     ++   GQ C A         VY + VE+   
Sbjct: 260 YVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAK 319
Query: 362 RAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPT 421
           R     VGDP    V+ GP I P    +++  I   +E    +  GG RLG    +VQPT
Sbjct: 320 RLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPT--YVQPT 377
Query: 422 VFSDVTVSFISLLQFLIPIFSFIILCV 448
                      ++ +   +F+ + L V
Sbjct: 378 FVEAPADRVKDMVLYKREVFAPVALAV 404

>pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating Glyceraldehyde-3- Phosphate Dehydrogenase Length = 501

Iteration: 1
 Score =  147 bits (372), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/361 (31%), Positives = 166/361 (45%), Gaps = 17/361 (4%)
Query: 69  AASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWP--KMTPYERSRIML 126
             SG+   V  P     IA V     E+++R   T    F  G W    M   ER  ++ 
Sbjct: 28  GGSGQEIEVKSPIDLATIAKVISPSREEVER---TLDVLFKRGRWSARDMPGTERLAVLR 84
Query: 127 RAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGN 186
           +AAD+IE+N++  A +   N GKP   ++  EV   V  L        KI G  +PGD  
Sbjct: 85  KAADIIERNLDVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGGDYIPGDWT 143
Query: 187 YH-IQT----LHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYV 241
           Y  ++T      EP+GV   I P+N+PL     K+  +   GN +V+K +   PL A   
Sbjct: 144 YDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMA 203
Query: 242 AKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKP 301
            K   +AG PP  + +++  G  A   +A    V  +SFTG  + G+ V ++     +K 
Sbjct: 204 VKALLDAGFPPDAIALLNLPGKEAEKIVADDR-VAAVSFTGSTEVGERVVKVG---GVKQ 259
Query: 302 VTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKA 361
             +ELGG  P I+ +DAD+D A +     ++   GQ C A         VY + VE+   
Sbjct: 260 YVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAK 319
Query: 362 RAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPT 421
           R     VGDP    V+ GP I P    +++  I   +E    +  GG RLG    +VQPT
Sbjct: 320 RLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPT--YVQPT 377
Query: 422 V 422
           +
Sbjct: 378 L 378

>pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Lactobacillus Acidophilus Length = 484

Iteration: 1
 Score =  137 bits (346), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/351 (29%), Positives = 161/351 (45%), Gaps = 11/351 (3%)
Query: 79  DPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEE 138
           +P T E  A+     ++ ID A+  A   + +  W    P  R+ I+   A+ ++++ +E
Sbjct: 10  NPYTNEAFASYDNPTSKQIDEAINLAHALYKK--WRHEEPASRAEILHDIANALKEHEDE 67
Query: 139 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWA-DKIHGLTVPGD-GNYHIQTLHEPI 196
           LA   T   GK   +S K EV + V + +YYA    + +    +  D GN +   L +  
Sbjct: 68  LAKXXTLEXGKLLSES-KEEVELCVSICNYYADHGPEXLKPTKLNSDLGNAYY--LKQST 124
Query: 197 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVL- 255
           GV     PWNFPL       AP    GN I+LK A   P +A   AK+   AG P G L 
Sbjct: 125 GVIXACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEGSLI 184
Query: 256 NVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIF 315
           N+   Y   A   + +   +  ++ TG    G  V E A K NLK  T ELGG   FI+ 
Sbjct: 185 NLYPSYDQLAD--IIADPRIQGVALTGSERGGSAVAEAAGK-NLKKSTXELGGNDAFIVL 241
Query: 316 DDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG 375
           DDAD      + + A  YN GQ C +  R  V +  YDE + + K        GDP ++ 
Sbjct: 242 DDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEAD 301
Query: 376 VEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDV 426
               P    +  +K+   ++  I++ A +      + ++G F +PT+ +D+
Sbjct: 302 TTLPPXNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDI 352

>pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From Geobacter Sulfurreducens Pca Length = 1026

Iteration: 1
 Score =  137 bits (344), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/325 (33%), Positives = 158/325 (48%), Gaps = 18/325 (5%)
Query: 113 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYA-- 170
           W    P  R+  +L+AA    K + EL+A +    GK + Q+  ++V   +  L YYA  
Sbjct: 584 WRDTDPRTRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQAY-ADVTEAIDFLEYYARE 642
Query: 171 ----GWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTI 226
               G   ++     PG+ N++    +EP GVA  I PWNFPL +     + A+  GN +
Sbjct: 643 MIRLGQPQRVG--HAPGELNHY---FYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCV 697
Query: 227 VLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDT 286
           V K +  T +   ++ +LF EAGLP GV N   G G   G  L  H D+  ++FTG  +T
Sbjct: 698 VFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMET 757
Query: 287 GKIVQELAAK-----SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCA 341
           G  + E AAK     +N+K +  E+GGK+  II DDAD+D+AV    ++ F  QGQ C A
Sbjct: 758 GLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSA 817
Query: 342 GSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESN 401
            SR  V + VYD+F+E+  + A    VG         G   D +  + +  Y   G    
Sbjct: 818 CSRVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREG 877
Query: 402 ATLECGGDRLGNRGYFVQPTVFSDV 426
             L       G  GYFV  T+   +
Sbjct: 878 HVLYESPVPAGE-GYFVPMTIIGGI 901

>pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 521

Iteration: 1
 Score =  133 bits (335), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 112/374 (29%), Positives = 169/374 (45%), Gaps = 11/374 (2%)
Query: 60  NLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPY 119
           + I+G+ V   SG+   +++P T EV   VA   A D D A A       +  W    P 
Sbjct: 29  HFIDGKRVAGTSGRVSNIFNPATGEVQGTVAL--ASDADLAAAVESAKAAQPKWAATNPQ 86
Query: 120 ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL 179
            R+R+  +   L+  N  ELA   +  +GK  +   K ++   + +  +  G        
Sbjct: 87  RRARVFXKFVQLLNDNXNELAEXLSREHGK-TIDDAKGDIVRGLEVCEFVIGIPHLQKSE 145
Query: 180 TVPGDG-NYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 238
              G G      ++ +P+G+   I P+NFP  +  W  APA+ CGN  +LK +E+ P   
Sbjct: 146 FTEGAGPGIDXYSIRQPVGIGAGITPFNFPGXIPXWXFAPAIACGNAFILKPSERDPSVP 205
Query: 239 LYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN 298
           + +A+L  EAGLP G+LNVV+G    A  A+ +H D+  +SF G     + V   AA  N
Sbjct: 206 IRLAELXIEAGLPAGILNVVNG-DKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAA-XN 263
Query: 299 LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTY-VHERVYDEFVE 357
            K      G K+  II  DAD+DQA      A + + G+ C A S    V E   +  ++
Sbjct: 264 GKRAQCFGGAKNHXIIXPDADLDQAANALIGAGYGSAGERCXAISVAVPVGEETANRLID 323
Query: 358 KAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGY- 416
           K         +G       + GP +  E  Q++   I SGIE  A L   G     +GY 
Sbjct: 324 KLVPXVESLRIGPYTDEKADXGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYE 383
Query: 417 ---FVQPTVFSDVT 427
              F+   +F DVT
Sbjct: 384 NGHFIGGCLFDDVT 397

>pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A (Puta) Protein Length = 1001

Iteration: 1
 Score =  130 bits (328), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 103/315 (32%), Positives = 143/315 (45%), Gaps = 9/315 (2%)
Query: 113 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGW 172
           W +     R+  + +AA L+E       AL     GK    +L SE+        YYA  
Sbjct: 566 WSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDAL-SELREAADFCRYYAAQ 624
Query: 173 ADKIHG--LTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKS 230
             K+ G    +PG             GV   I PWNFPL +F  +V  AL  GN++V K 
Sbjct: 625 GRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKP 684
Query: 231 AEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGK-I 289
           AEQTP  A     L HEAG+P   L +V+G G   GAAL +H D+  + FTG  +  + I
Sbjct: 685 AEQTPRIAREAVALLHEAGIPKSALYLVTGDG-RIGAALTAHPDIAGVVFTGSTEVARSI 743
Query: 290 VQELAAKSN-LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVH 348
            + LAAK   + P+  E GG +  I    A  +Q  +    + F + GQ C A    +V 
Sbjct: 744 NRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVTSAFRSAGQRCSALRLLFVQ 803
Query: 349 ERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGG 408
           E V D  +E     A    +GDP       GP ID E  Q++  +I + +++ A L   G
Sbjct: 804 EDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHI-ARMKTEARLHFAG 862
Query: 409 DRLGNRGYFVQPTVF 423
                 G FV P +F
Sbjct: 863 P--APEGCFVAPHIF 875

>pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462

Iteration: 1
 Score =  127 bits (319), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/368 (26%), Positives = 160/368 (43%), Gaps = 6/368 (1%)
Query: 79  DPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEE 138
           +P T + +A     +A++I+ A++ A   F +  W   +  +R++ +      +  + EE
Sbjct: 13  NPATGQTLAAXPWANAQEIEHALSLAASGFKK--WKXTSVAQRAQTLRDIGQALRAHAEE 70
Query: 139 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGV 198
            A   T   GKP  Q+ ++EV     L  +YA               N      + P+GV
Sbjct: 71  XAQCITREXGKPIKQA-RAEVTKSAALCDWYAEHGPAXLNPEPTLVENQQAVIEYRPLGV 129
Query: 199 AGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVV 258
              I PWNFPL        P L  GN+ +LK A      A  +A++  EAG P GV   V
Sbjct: 130 ILAIXPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQXIARILAEAGTPAGVYGWV 189
Query: 259 SGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDA 318
           +         + +   +  ++ TG            A + LK   LELGG  PFI+ +DA
Sbjct: 190 NANNEGVSQXI-NDPRIAAVTVTGSVRA-GAAIGAQAGAALKKCVLELGGSDPFIVLNDA 247
Query: 319 DVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQ 378
           D++ AV+ A    + N GQ C A  R  V E +   F ++  A A     GDP     + 
Sbjct: 248 DLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKXGDPLVEENDL 307
Query: 379 GPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQFLI 438
           GP    +   ++ + +++ +   A L  GG+++   G +   TV +DVT    +  Q L 
Sbjct: 308 GPXARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDXTAFRQELF 367
Query: 439 -PIFSFII 445
            P+ +  +
Sbjct: 368 GPVAAITV 375

>pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde Dehydrogenase From Pseudomonas Aeruginosa. Length = 490

Iteration: 1
 Score =  127 bits (318), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/298 (31%), Positives = 142/298 (47%), Gaps = 7/298 (2%)
Query: 58  TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
           + + I GQ++ A  G+T    DP    V+ +    DA  +D AV  AR+AF    W +  
Sbjct: 6   STHYIAGQWL-AGQGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPA--WARRP 62
Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
             +R  ++ R A  ++   +ELA +     GKP  +S       V ++      + ++  
Sbjct: 63  LEQRIELLERFAATLKSRADELARVIGEETGKPLWESATEVTSXVNKVAISVQAFRERTG 122
Query: 178 GLTVP-GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
             + P  D    ++  H+P GV     P+NFP  L    + PAL  GN +V K +E TP 
Sbjct: 123 EKSGPLADATAVLR--HKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPK 180
Query: 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
            A    K + +AGLP GVLN+V G G   G ALA+H  +D L FTG   TG ++      
Sbjct: 181 VAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGG 239
Query: 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDE 354
              K + LE GG +P ++ + AD+D AV     + F + GQ C    R  V +  + +
Sbjct: 240 QPQKILALEXGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGD 297

>pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From Anabaena Variabilis. Length = 474

Iteration: 1
 Score =  114 bits (285), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/240 (35%), Positives = 119/240 (49%), Gaps = 13/240 (5%)
Query: 195 PIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPP-- 252
           P  + G I PWNFPL L      PAL  G  +V+K +E  P    +VA L       P  
Sbjct: 126 PYPLVGVISPWNFPLTLSXIDTIPALLAGCAVVVKPSEIAPR---FVAPLLXALNTVPEL 182
Query: 253 -GVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSP 311
             VL  V G G T GA L ++  VD + FTG   TG+ V E AA+  + P  LELGGK P
Sbjct: 183 RDVLIFVEGGGET-GANLINY--VDFVCFTGSVATGREVAETAARRFI-PAYLELGGKDP 238
Query: 312 FIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDP 371
            I+ + A+++ A     +    N GQ C +  R YV E  ++EF  +  A+A R  +  P
Sbjct: 239 AIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYP 298
Query: 372 FKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGG--DRLGNRGYFVQPTVFSDVTVS 429
                  GP I  +Q   +  +I   +E  A + CGG  + LG  G++ +PTV ++V  S
Sbjct: 299 LVEDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGKVEELGG-GWWCRPTVXTNVNHS 357

>pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ Length = 457

Iteration: 1
 Score =  108 bits (271), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 81/246 (32%), Positives = 121/246 (49%), Gaps = 8/246 (3%)
Query: 121 RSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADK-IHGL 179
           R + + R  + +  N E L +    + GKP      +E+  V+  + +     D+ +  +
Sbjct: 52  RKQSLERLKEAVINNKEALYSALAEDLGKPKDVVDLAEIGAVLHEIDFALAHLDEWVAPV 111
Query: 180 TVPGD---GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
           +VP            + EP GV   I P+N+P+ L    +  A+  GNT ++K +E TP 
Sbjct: 112 SVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPE 171
Query: 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
           T+  + K+  EA   P  + V+ G G    + L S +  D + FTG  + GK+V + AAK
Sbjct: 172 TSAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAAK 228
Query: 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 356
            +L PV LELGGK P I+  DAD+DQ V    F  F N GQ C A    YVH  V D  +
Sbjct: 229 -HLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTCIAPDYLYVHYSVKDALL 287
Query: 357 EKAKAR 362
           E+   R
Sbjct: 288 ERLVER 293

>pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ And Benzoate Adduct Length = 457

Iteration: 1
 Score =  104 bits (260), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 120/246 (48%), Gaps = 8/246 (3%)
Query: 121 RSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADK-IHGL 179
           R + + R  + +  N E L +    + GKP      +E+  V+  + +     D+ +  +
Sbjct: 52  RKQSLERLKEAVINNKEALYSALAEDLGKPKDVVDLAEIGAVLHEIDFALAHLDEWVAPV 111
Query: 180 TVPGD---GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
           +VP            + EP GV   I P+N+P+ L    +  A+  GNT ++K +E TP 
Sbjct: 112 SVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPE 171
Query: 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
           T+  + K+  EA   P  + V+ G G    + L S +  D + FTG  + GK+V + AAK
Sbjct: 172 TSAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAAK 228
Query: 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 356
            +L PV LELGGK P I+  DAD+DQ V    F  F N GQ   A    YVH  V D  +
Sbjct: 229 -HLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALL 287
Query: 357 EKAKAR 362
           E+   R
Sbjct: 288 ERLVER 293

>pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate Dehydrogenase Complexed With Sulfate Ion Length = 563

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 156/351 (44%), Gaps = 16/351 (4%)
Query: 83  AEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK-NMEELAA 141
           A  +A     D   ++RA+  A  A  E  W      +R+++ L+AAD++      E+ A
Sbjct: 88  AHKVAKFCYADKALLNRAIDAALAARKE--WDLKPMADRAQVFLKAADMLSGPRRAEVLA 145
Query: 142 LETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG---LTVPGDGNYHIQTLHEPIGV 198
                 GK  +Q+       ++    + A +A ++ G   ++VP   N+ +    E  G 
Sbjct: 146 KTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLE--GF 203
Query: 199 AGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVV 258
              I P+NF  +      APAL  GN ++ K ++   L +  V ++  EAGLPP ++  V
Sbjct: 204 VAAISPFNFTAIGGNLAGAPALM-GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFV 262
Query: 259 SGYGPTAGAALASHMDVDKLSFTGHCDTGK-----IVQELAAKSNLKPVTLELGGKSPFI 313
              GPT G  + S   +  ++FTG   T K     + Q L        +  E GGK+   
Sbjct: 263 PADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFHF 322
Query: 314 IFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFK 373
           +   ADVD  V     + F   GQ C A SR YV + ++ +   +      R  VGDP +
Sbjct: 323 VHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVGDPAE 382
Query: 374 S-GVEQGPQIDPEQFQKVLRYIRSGIES-NATLECGGDRLGNRGYFVQPTV 422
             G      ID + F ++ +++     S + ++  GG    + GY+V+P +
Sbjct: 383 DFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCI 433

>pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form Length = 469

Iteration: 1
 Score =  100 bits (250), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 141/335 (42%), Gaps = 19/335 (5%)
Query: 97  IDRAVATARKAFDEGPWPKMTPYERSRIMLRAAD-LIEKNMEELAALETWNNGKPYVQSL 155
           I  AV  AR AF  G   +  P +     L A   LI++  +EL      +  K    + 
Sbjct: 20  ISEAVKRARAAFSSG---RTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAY 76
Query: 156 KSEVPMVVRLLHYYAG----WADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLL 211
             EV  V+  + Y       WA        P      +    EP+GV   I  WN+P  L
Sbjct: 77  YEEVVYVLEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNL 136
Query: 212 FTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALAS 271
               +  A+  GN +VLK +E +   A  +A +  +  L   +  V++G  P     L  
Sbjct: 137 TIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQY-LDKDLYPVINGGVPETTELLKE 195
Query: 272 HMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFAL 331
             D   + +TG    GKI+   AAK +L PVTLELGGKSP  +  + D+D A     +  
Sbjct: 196 RFD--HILYTGSTGVGKIIMTAAAK-HLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGK 252
Query: 332 FYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVL 391
           F N GQ C A         + ++ VEK K ++++   G+  K   + G  I    FQ+V+
Sbjct: 253 FMNSGQTCVAPDYILCDPSIQNQIVEKLK-KSLKEFYGEDAKKSRDYGRIISARHFQRVM 311
Query: 392 RYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDV 426
                 IE       G      R  ++ PT+ +DV
Sbjct: 312 GL----IEGQKVAYGGTGDAATR--YIAPTILTDV 340

>pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Length = 566

Iteration: 1
 Score =  100 bits (250), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 152/348 (43%), Gaps = 16/348 (4%)
Query: 86  IANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK-NMEELAALET 144
           +A     D   +++A+  A  A  E  W      +R++I L+AAD++      E+ A   
Sbjct: 94  VAKFCYADKSLLNKAIEAALAARKE--WDLKPIADRAQIFLKAADMLSGPRRAEILAKTM 151
Query: 145 WNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG---LTVPGDGNYHIQTLHEPIGVAGQ 201
              GK  +Q+       ++    + A +A ++ G   ++VP   N  +    E  G    
Sbjct: 152 VGQGKTVIQAEIDAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLE--GFVAA 209
Query: 202 IVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGY 261
           I P+NF  +      APAL  GN ++ K ++   L +  V ++  EAGLPP ++  V   
Sbjct: 210 ISPFNFTAIGGNLAGAPALM-GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPAD 268
Query: 262 GPTAGAALASHMDVDKLSFTGHCDTGK-----IVQELAAKSNLKPVTLELGGKSPFIIFD 316
           GP  G  + S   +  ++FTG   T K     + Q L        +  E GGK+   +  
Sbjct: 269 GPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFVHR 328
Query: 317 DADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKS-G 375
            ADV+  V     + F   GQ C A SR YV   ++ +   +      R  VGDP +  G
Sbjct: 329 SADVESVVSGTLRSAFEYGGQKCSACSRLYVPHSLWPQIKGRLLEEHSRIKVGDPAEDFG 388
Query: 376 VEQGPQIDPEQFQKVLRYIRSGIES-NATLECGGDRLGNRGYFVQPTV 422
                 ID + F ++ +++     S + T+  GG    + GYFV+P +
Sbjct: 389 TFFSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCI 436

>pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352a Length = 566

Iteration: 1
 Score = 99.8 bits (247), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 152/348 (43%), Gaps = 16/348 (4%)
Query: 86  IANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK-NMEELAALET 144
           +A     D   +++A+  A  A  E  W      +R++I L+AAD++      E+ A   
Sbjct: 94  VAKFCYADKSLLNKAIEAALAARKE--WDLKPIADRAQIFLKAADMLSGPRRAEILAKTM 151
Query: 145 WNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG---LTVPGDGNYHIQTLHEPIGVAGQ 201
              GK  +Q+       ++    + A +A ++ G   ++VP   N  +    E  G    
Sbjct: 152 VGQGKTVIQAEIDAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLE--GFVAA 209
Query: 202 IVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGY 261
           I P+NF  +      APAL  GN ++ K ++   L +  V ++  EAGLPP ++  V   
Sbjct: 210 ISPFNFTAIGGNLAGAPALM-GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPAD 268
Query: 262 GPTAGAALASHMDVDKLSFTGHCDTGK-----IVQELAAKSNLKPVTLELGGKSPFIIFD 316
           GP  G  + S   +  ++FTG   T K     + Q L        +  E GGK+   +  
Sbjct: 269 GPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFVHR 328
Query: 317 DADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKS-G 375
            ADV+  V     + F   GQ C A +R YV   ++ +   +      R  VGDP +  G
Sbjct: 329 SADVESVVSGTLRSAFEYGGQKCSACARLYVPHSLWPQIKGRLLEEHSRIKVGDPAEDFG 388
Query: 376 VEQGPQIDPEQFQKVLRYIRSGIES-NATLECGGDRLGNRGYFVQPTV 422
                 ID + F ++ +++     S + T+  GG    + GYFV+P +
Sbjct: 389 TFFSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCI 436

>pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide- Adenine-Dinucleotide Length = 452

Iteration: 1
 Score = 99.4 bits (246), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 94/336 (27%), Positives = 146/336 (43%), Gaps = 21/336 (6%)
Query: 97  IDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLK 156
           I   V  AR+AF+ G    +    R + +     +I +N++ ++     + GK    S  
Sbjct: 3   ISDTVKRAREAFNSGKTRSLQ--FRIQQLEALQRMINENLKSISGALASDLGKNEWTSYY 60
Query: 157 SEVPMVVRLL----HYYAGWADK--IHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLL 210
            EV  V+  L         WA+   +         + +I +  EP+GV   I  WN+P  
Sbjct: 61  EEVAHVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHS--EPLGVVLVIGAWNYPFN 118
Query: 211 LFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALA 270
           L    +  A+  GN ++LK +E +   A  +A L  +  +   +  VV G  P     L 
Sbjct: 119 LTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQY-MDQNLYLVVKGGVPETTELLK 177
Query: 271 SHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFA 330
              D   + +TG    GKIV   AAK +L PVTLELGGKSP  +  D D+D A     + 
Sbjct: 178 ERFD--HIMYTGSTAVGKIVMAAAAK-HLTPVTLELGGKSPCYVDKDCDLDVACRRIAWG 234
Query: 331 LFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKV 390
            F N GQ C A         + ++ VEK K ++++   G+  K   + G  I+   FQ+V
Sbjct: 235 KFMNSGQTCVAPDYILCDPSIQNQIVEKLK-KSLKDFYGEDAKQSRDYGRIINDRHFQRV 293
Query: 391 LRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDV 426
                 G+  N  +  GG        ++ PT+  DV
Sbjct: 294 -----KGLIDNQKVAHGG-TWDQSSRYIAPTILVDV 323

>pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352l Length = 566

Iteration: 1
 Score = 98.2 bits (243), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 151/348 (43%), Gaps = 16/348 (4%)
Query: 86  IANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK-NMEELAALET 144
           +A     D   +++A+  A  A  E  W      +R++I L+AAD++      E+ A   
Sbjct: 94  VAKFCYADKSLLNKAIEAALAARKE--WDLKPIADRAQIFLKAADMLSGPRRAEILAKTM 151
Query: 145 WNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG---LTVPGDGNYHIQTLHEPIGVAGQ 201
              GK  +Q+       ++    + A +A ++ G   ++VP   N  +    E  G    
Sbjct: 152 VGQGKTVIQAEIDAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLE--GFVAA 209
Query: 202 IVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGY 261
           I P+NF  +      APAL  GN ++ K ++   L +  V ++  EAGLPP ++  V   
Sbjct: 210 ISPFNFTAIGGNLAGAPALM-GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPAD 268
Query: 262 GPTAGAALASHMDVDKLSFTGHCDTGK-----IVQELAAKSNLKPVTLELGGKSPFIIFD 316
           GP  G  + S   +  ++FTG   T K     + Q L        +  E GGK+   +  
Sbjct: 269 GPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFVHR 328
Query: 317 DADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKS-G 375
            ADV+  V     + F   GQ C A  R YV   ++ +   +      R  VGDP +  G
Sbjct: 329 SADVESVVSGTLRSAFEYGGQKCSACLRLYVPHSLWPQIKGRLLEEHSRIKVGDPAEDFG 388
Query: 376 VEQGPQIDPEQFQKVLRYIRSGIES-NATLECGGDRLGNRGYFVQPTV 422
                 ID + F ++ +++     S + T+  GG    + GYFV+P +
Sbjct: 389 TFFSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCI 436

>pdb|2Y53|A Chain A, Crystal Structure Of E257q Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 158/363 (43%), Gaps = 44/363 (12%)
Query: 59  KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
           KN + GQ++ A +G    + DP T   +  V+  +  D+ RA + AR+  D G   +   
Sbjct: 9   KNHVAGQWI-AGTGAGITLTDPVTGVALVRVSS-EGLDLARAFSFARE--DGGAALRALT 64
Query: 119 Y-ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWA---D 174
           Y +R+  +     L++    +  A+ T N+G     S   ++   +  L YYA       
Sbjct: 65  YAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDS-AVDIDGGIFTLSYYAKLGASLG 123
Query: 175 KIHGL------TVPGDGNYHIQTLHEPI-GVAGQIVPWNFPLLLFTWKVAPALTCGNTIV 227
           ++H L      ++  D ++  Q +  P  GVA  I  +NFP      K APAL  G  ++
Sbjct: 124 EVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVI 183
Query: 228 LKSAEQTP-LTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDT 286
           +K A  T  LT   VA +     LPPG L+++ G   ++   L      D +SFTG  DT
Sbjct: 184 VKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQIRSFDVVSFTGSADT 240
Query: 287 GKIVQ------ELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQ----- 335
              ++      +  A+ N++  +L     +  I+  DA  D       F LF  +     
Sbjct: 241 AATLRAHPAFVQRGARLNVQADSL-----NSAILCADATPDTPA----FDLFIKEVVREM 291
Query: 336 ----GQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVL 391
               GQ C A  R +V E   +  +E  KA+  +  VG+P    V  G  +  EQ++ VL
Sbjct: 292 TVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVL 351
Query: 392 RYI 394
             I
Sbjct: 352 AGI 354

>pdb|2VRO|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Burkholderia Xenovorans Lb400 Length = 532

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 158/363 (43%), Gaps = 44/363 (12%)
Query: 59  KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
           KN + GQ++ A +G    + DP T   +  V+  +  D+ RA + AR+  D G   +   
Sbjct: 7   KNHVAGQWI-AGTGAGITLTDPVTGVALVRVSS-EGLDLARAFSFARE--DGGAALRALT 62
Query: 119 Y-ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWA---D 174
           Y +R+  +     L++    +  A+ T N+G     S   ++   +  L YYA       
Sbjct: 63  YAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDS-AVDIDGGIFTLSYYAKLGASLG 121
Query: 175 KIHGL------TVPGDGNYHIQTLHEPI-GVAGQIVPWNFPLLLFTWKVAPALTCGNTIV 227
           ++H L      ++  D ++  Q +  P  GVA  I  +NFP      K APAL  G  ++
Sbjct: 122 EVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVI 181
Query: 228 LKSAEQTP-LTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDT 286
           +K A  T  LT   VA +     LPPG L+++ G   ++   L      D +SFTG  DT
Sbjct: 182 VKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQIRSFDVVSFTGSADT 238
Query: 287 GKIVQ------ELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQ----- 335
              ++      +  A+ N++  +L     +  I+  DA  D       F LF  +     
Sbjct: 239 AATLRAHPAFVQRGARLNVEADSL-----NSAILCADATPDTPA----FDLFIKEVVREM 289
Query: 336 ----GQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVL 391
               GQ C A  R +V E   +  +E  KA+  +  VG+P    V  G  +  EQ++ VL
Sbjct: 290 TVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVL 349
Query: 392 RYI 394
             I
Sbjct: 350 AGI 352

>pdb|2Y52|A Chain A, Crystal Structure Of E496a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 158/363 (43%), Gaps = 44/363 (12%)
Query: 59  KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
           KN + GQ++ A +G    + DP T   +  V+  +  D+ RA + AR+  D G   +   
Sbjct: 9   KNHVAGQWI-AGTGAGITLTDPVTGVALVRVSS-EGLDLARAFSFARE--DGGAALRALT 64
Query: 119 Y-ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWA---D 174
           Y +R+  +     L++    +  A+ T N+G     S   ++   +  L YYA       
Sbjct: 65  YAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDS-AVDIDGGIFTLSYYAKLGASLG 123
Query: 175 KIHGL------TVPGDGNYHIQTLHEPI-GVAGQIVPWNFPLLLFTWKVAPALTCGNTIV 227
           ++H L      ++  D ++  Q +  P  GVA  I  +NFP      K APAL  G  ++
Sbjct: 124 EVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVI 183
Query: 228 LKSAEQTP-LTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDT 286
           +K A  T  LT   VA +     LPPG L+++ G   ++   L      D +SFTG  DT
Sbjct: 184 VKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQIRSFDVVSFTGSADT 240
Query: 287 GKIVQ------ELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQ----- 335
              ++      +  A+ N++  +L     +  I+  DA  D       F LF  +     
Sbjct: 241 AATLRAHPAFVQRGARLNVEADSL-----NSAILCADATPDTPA----FDLFIKEVVREM 291
Query: 336 ----GQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVL 391
               GQ C A  R +V E   +  +E  KA+  +  VG+P    V  G  +  EQ++ VL
Sbjct: 292 TVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVL 351
Query: 392 RYI 394
             I
Sbjct: 352 AGI 354

>pdb|2Y51|A Chain A, Crystal Structure Of E167a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 158/363 (43%), Gaps = 44/363 (12%)
Query: 59  KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
           KN + GQ++ A +G    + DP T   +  V+  +  D+ RA + AR+  D G   +   
Sbjct: 9   KNHVAGQWI-AGTGAGITLTDPVTGVALVRVSS-EGLDLARAFSFARE--DGGAALRALT 64
Query: 119 Y-ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWA---D 174
           Y +R+  +     L++    +  A+ T N+G     S   ++   +  L YYA       
Sbjct: 65  YAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDS-AVDIDGGIFTLSYYAKLGASLG 123
Query: 175 KIHGL------TVPGDGNYHIQTLHEPI-GVAGQIVPWNFPLLLFTWKVAPALTCGNTIV 227
           ++H L      ++  D ++  Q +  P  GVA  I  +NFP      K APAL  G  ++
Sbjct: 124 EVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWAKAAPALLSGVPVI 183
Query: 228 LKSAEQTP-LTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDT 286
           +K A  T  LT   VA +     LPPG L+++ G   ++   L      D +SFTG  DT
Sbjct: 184 VKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQIRSFDVVSFTGSADT 240
Query: 287 GKIVQ------ELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQ----- 335
              ++      +  A+ N++  +L     +  I+  DA  D       F LF  +     
Sbjct: 241 AATLRAHPAFVQRGARLNVEADSL-----NSAILCADATPDTPA----FDLFIKEVVREM 291
Query: 336 ----GQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVL 391
               GQ C A  R +V E   +  +E  KA+  +  VG+P    V  G  +  EQ++ VL
Sbjct: 292 TVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVL 351
Query: 392 RYI 394
             I
Sbjct: 352 AGI 354

>pdb|2Y5D|A Chain A, Crystal Structure Of C296a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 97/363 (26%), Positives = 157/363 (43%), Gaps = 44/363 (12%)
Query: 59  KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
           KN + GQ++ A +G    + DP T   +  V+  +  D+ RA + AR+  D G   +   
Sbjct: 9   KNHVAGQWI-AGTGAGITLTDPVTGVALVRVSS-EGLDLARAFSFARE--DGGAALRALT 64
Query: 119 Y-ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWA---D 174
           Y +R+  +     L++    +  A+ T N+G     S   ++   +  L YYA       
Sbjct: 65  YAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDS-AVDIDGGIFTLSYYAKLGASLG 123
Query: 175 KIHGL------TVPGDGNYHIQTLHEPI-GVAGQIVPWNFPLLLFTWKVAPALTCGNTIV 227
           ++H L      ++  D ++  Q +  P  GVA  I  +NFP      K APAL  G  ++
Sbjct: 124 EVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVI 183
Query: 228 LKSAEQTP-LTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDT 286
           +K A  T  LT   VA +     LPPG L+++ G   ++   L      D +SFTG  DT
Sbjct: 184 VKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQIRSFDVVSFTGSADT 240
Query: 287 GKIVQ------ELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQ----- 335
              ++      +  A+ N++  +L     +  I+  DA  D       F LF  +     
Sbjct: 241 AATLRAHPAFVQRGARLNVEADSL-----NSAILCADATPDTPA----FDLFIKEVVREM 291
Query: 336 ----GQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVL 391
               GQ   A  R +V E   +  +E  KA+  +  VG+P    V  G  +  EQ++ VL
Sbjct: 292 TVKSGQKATAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVL 351
Query: 392 RYI 394
             I
Sbjct: 352 AGI 354

>pdb|3V4C|A Chain A, Crystal Structure Of A Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 528

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 121/306 (39%), Gaps = 36/306 (11%)
Query: 59  KNLINGQFVDAASGKTF---PVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPK 115
           K+L+ G+++D A   TF   P + P       + A G  E ++RA   A +AF    W  
Sbjct: 31  KHLVAGEWLDGAG--TFASAPAHGP-----AHDFAVGTVELVNRACEAAEEAF----WTY 79
Query: 116 --MTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWA 173
              +  ER+  +   AD IE   E +  + +   G P  + L  E       L  +A   
Sbjct: 80  GYSSRKERAAFLRAIADEIEARAEAITEIGSQETGLPEAR-LNGERGRTTGQLRLFADHI 138
Query: 174 DKIHGLTVPGDG---------NYHIQTLHEPIGVAGQIVPWNFPLLLFT--WKVAPALTC 222
           +K   L    D             I+ +  P+G        NFPL   T     A AL  
Sbjct: 139 EKGDYLDRRVDAAXPERQPAPRQEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAA 198
Query: 223 GNTIVLKSAEQTPLTALYVAKLFHEA----GLPPGVLNVVSGYGPTAGAALASHMDVDKL 278
           G  +V+K     P T   VA+    A    G+ PGV +++ G     G AL  H  +  +
Sbjct: 199 GCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAV 258
Query: 279 SFTGHCDTGKIVQEL-AAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAH---FALFYN 334
            FTG    G+ + +L AA+    P   ELG  +P  +  +A   +A  L      +L   
Sbjct: 259 GFTGSLAGGRALFDLCAARPEPIPFFGELGSVNPXFLLPEALKARAETLGQGWAGSLTXG 318
Query: 335 QGQCCC 340
            GQ C 
Sbjct: 319 AGQFCT 324

>pdb|3MY7|A Chain A, The Crystal Structure Of The Acdh Domain Of An Alcohol Dehyd From Vibrio Parahaemolyticus To 2.25a Length = 452

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 72/179 (40%), Gaps = 9/179 (5%)
Query: 184 DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAK 243
           D N    T+ EP+G+   IVP   P     +K   +L   N I+     +   +    AK
Sbjct: 92  DDNLGTXTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAK 151
Query: 244 LFHEA----GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299
           L  +A    G P  ++  +         AL  H D+  +  TG     K     AA S+ 
Sbjct: 152 LVLDAAVAAGAPKDIIGWIDQPSVELSNALXKHDDIALILATGGPGXVK-----AAYSSG 206
Query: 300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 358
           KP      G  P +I + AD+ +AV     +  ++ G  C +     V + VYDE  E+
Sbjct: 207 KPAIGVGAGNVPVVIDETADIKRAVASVLXSKTFDNGVVCASEQAVIVVDEVYDEVKER 265

>pdb|1EYY|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde Dehydrogenase From Vibrio Harveyi. Length = 510

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 52/120 (43%), Gaps = 7/120 (5%)
Query: 206 NFPLLLFT--WKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEA----GLPPGVLNVVS 259
           NFPL         A AL  G  +++K     P T+  VA+   +A     LP  +  ++ 
Sbjct: 147 NFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQ 206
Query: 260 GYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA-AKSNLKPVTLELGGKSPFIIFDDA 318
           G     G AL SH ++  + FTG    G+ +  LA  +    P   ELG  +P  IF  A
Sbjct: 207 GNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPIPFYGELGAINPTFIFPSA 266

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	456
1bxs_A	501	Aldehyde dehydrogenase; retinal, class 1, tetramer	0.0
1o04_A	500	Aldehyde dehydrogenase, mitochondrial precursor; A	0.0
2o2p_A	517	Formyltetrahydrofolate dehydrogenase; aldehyde deh	0.0
2ve5_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	0.0
3ed6_A	520	Betaine aldehyde dehydrogenase; structural genomic	0.0
3u4j_A	528	NAD-dependent aldehyde dehydrogenase; PSI-biology,	0.0
3iwj_A	503	Putative aminoaldehyde dehydrogenase; rossmann fol	0.0
2d4e_A	515	5-carboxymethyl-2-hydroxymuconate semialdehyde deh	0.0
1a4s_A	503	ALDH, betaine aldehyde dehydrogenase; oxidoreducta	0.0
3r31_A	517	BADH, betaine aldehyde dehydrogenase; structural g	0.0
1wnd_A	495	Putative betaine aldehyde dehydrogenase; NADH, flu	0.0
4f3x_A	498	Putative aldehyde dehydrogenase; structural genomi	0.0
3b4w_A	495	Aldehyde dehydrogenase; RV0223C-NAD complex, struc	0.0
3qan_A	538	1-pyrroline-5-carboxylate dehydrogenase 1; proline	0.0
3i44_A	497	Aldehyde dehydrogenase; oxidoreductase, structural	0.0
3ty7_A	478	Putative aldehyde dehydrogenase SAV2122; structura	0.0
1uzb_A	516	1-pyrroline-5-carboxylate dehydrogenase; oxidoredu	0.0
3r64_A	508	NAD dependent benzaldehyde dehydrogenase; structur	0.0
1uxt_A	501	Glyceraldehyde-3-phosphate dehydrogenase (NADP+);	1e-172
3prl_A	505	NADP-dependent glyceraldehyde-3-phosphate dehydro;	1e-172
3pqa_A	486	Lactaldehyde dehydrogenase; structural genomics, p	1e-168
3ju8_A	490	Succinylglutamic semialdehyde dehydrogenase; alpha	1e-166
2y53_A	534	Aldehyde dehydrogenase (BOX pathway); oxidoreducta	1e-166
2imp_A	479	Lactaldehyde dehydrogenase; protein-lactate-NADH t	1e-151
1euh_A	475	NADP dependent non phosphorylating glyceraldehyde-	1e-149
4dng_A	485	Uncharacterized aldehyde dehydrogenase ALDY; struc	1e-147
4f9i_A	1026	Proline dehydrogenase/delta-1-pyrroline-5-carboxy	1e-138
2j6l_A	500	Aldehyde dehydrogenase family 7 member A1; NAD, re	1e-138
3k2w_A	497	Betaine-aldehyde dehydrogenase; structural genomic	1e-135
3jz4_A	481	Succinate-semialdehyde dehydrogenase [NADP+]; tetr	1e-134
3ifg_A	484	Succinate-semialdehyde dehydrogenase (NADP+); niai	1e-134
3ek1_A	504	Aldehyde dehydrogenase; ssgcid, oxidoreductase, st	1e-133
3rh9_A	506	Succinate-semialdehyde dehydrogenase (NAD(P)(+));	1e-133
2w8n_A	487	Succinate-semialdehyde dehydrogenase, mitochondria	1e-127
1ez0_A	510	ALDH, aldehyde dehydrogenase; nucleotide binding d	1e-123
3etf_A	462	Putative succinate-semialdehyde dehydrogenase; cen	1e-115
3ros_A	484	NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-	1e-114
3my7_A	452	Alcohol dehydrogenase/acetaldehyde dehydrogenase;	1e-108
3haz_A	1001	Proline dehydrogenase; proline utilization A, PUTA	3e-99
3v4c_A	528	Aldehyde dehydrogenase (NADP+); structural genomic	1e-98
1t90_A	486	MMSDH, probable methylmalonate-semialdehyde dehydr	8e-94
4e4g_A	521	Methylmalonate-semialdehyde dehydrogenase; structu	3e-89
4e3x_A	563	Delta-1-pyrroline-5-carboxylate dehydrogenase, mit	3e-84
3k9d_A	464	LMO1179 protein, aldehyde dehydrogenase; structura	3e-77
3sza_A	469	Aldehyde dehydrogenase, dimeric NADP-preferring; A	3e-50
3lns_A	457	Benzaldehyde dehydrogenase; oxidoreductase, NADP+,	5e-48
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-07

>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501

 Score =  696 bits (1800), Expect = 0.0
 Identities = 214/390 (54%), Positives = 281/390 (72%), Gaps = 2/390 (0%)

Query: 40  STAAVVEEPI-IPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDID 98
           S++A+ + P  +  +Q  YTK  IN ++  + SGK FPV++P T E +  V EGD ED+D
Sbjct: 2   SSSAMPDVPAPLTNLQFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVD 61

Query: 99  RAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKS 157
           +AV  AR+AF  G PW  M   ER R++ + ADLIE++   LA +E  N GK +  +   
Sbjct: 62  KAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLM 121

Query: 158 EVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVA 217
           ++   ++ L Y AGWADKI G T+P DGN+   T  EP+GV GQI+PWNFPLL+F WK+ 
Sbjct: 122 DLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIG 181

Query: 218 PALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDK 277
           PAL+CGNT+V+K AEQTPLTAL++  L  EAG PPGV+N+V GYGPTAGAA++SHMDVDK
Sbjct: 182 PALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDK 241

Query: 278 LSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQ 337
           ++FTG  + GK+++E A KSNLK V+LELGGKSP I+F DAD+D AVE AH  +FY+QGQ
Sbjct: 242 VAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQ 301

Query: 338 CCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSG 397
           CC A SR +V E +YDEFV ++  RA + ++G+P   GV QGPQID EQ++K+L  I SG
Sbjct: 302 CCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESG 361

Query: 398 IESNATLECGGDRLGNRGYFVQPTVFSDVT 427
            +  A LECGG   GN+GYF+QPTVFSDVT
Sbjct: 362 KKEGAKLECGGGPWGNKGYFIQPTVFSDVT 391

>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500

 Score =  693 bits (1792), Expect = 0.0
 Identities = 228/390 (58%), Positives = 280/390 (71%), Gaps = 2/390 (0%)

Query: 40  STAAVVEEPI-IPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDID 98
           S AA    P      ++   +  IN ++ DA S KTFP  +P T EVI  VAEGD ED+D
Sbjct: 1   SAAATQAVPAPNQQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVD 60

Query: 99  RAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKS 157
           +AV  AR AF  G PW +M    R R++ R ADLIE++   LAALET +NGKPYV S   
Sbjct: 61  KAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLV 120

Query: 158 EVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVA 217
           ++ MV++ L YYAGWADK HG T+P DG++   T HEP+GV GQI+PWNFPLL+  WK+ 
Sbjct: 121 DLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLG 180

Query: 218 PALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDK 277
           PAL  GN +V+K AEQTPLTALYVA L  EAG PPGV+N+V G+GPTAGAA+ASH DVDK
Sbjct: 181 PALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDK 240

Query: 278 LSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQ 337
           ++FTG  + G+++Q  A  SNLK VTLELGGKSP II  DAD+D AVE AHFALF+NQGQ
Sbjct: 241 VAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQ 300

Query: 338 CCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSG 397
           C CAGSRT+V E +YDEFVE++ ARA  R+VG+PF S  EQGPQ+D  QF+K+L YI +G
Sbjct: 301 CSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTG 360

Query: 398 IESNATLECGGDRLGNRGYFVQPTVFSDVT 427
            +  A L CGG    +RGYF+QPTVF DV 
Sbjct: 361 KQEGAKLLCGGGIAADRGYFIQPTVFGDVQ 390

>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517

 Score =  693 bits (1791), Expect = 0.0
 Identities = 154/409 (37%), Positives = 240/409 (58%), Gaps = 7/409 (1%)

Query: 26  LGRESSRARGISRFSTAAVVEEPIIPPVQISY---TKNLINGQFVDAASGKTFPVYDPRT 82
            G             +  V+        +++     +  I G+FVDA   KT+   +P  
Sbjct: 2   RGSHHHHHTTGEDDESECVINYVEKAVNKLTLQMPYQLFIGGEFVDAEGSKTYNTINPTD 61

Query: 83  AEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAAL 142
             VI  V+     D+D+AVA A++AF+ G W K+   +R R++ R AD++E++ EELA +
Sbjct: 62  GSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATI 121

Query: 143 ETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD----GNYHIQTLHEPIGV 198
           E  + G  Y  +LK+ V M ++   Y+AGW DKI G T+P +          T  EP+GV
Sbjct: 122 EALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGV 181

Query: 199 AGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVV 258
            G ++PWN+PL++ +WK A  L  GNT+V+K A+ TPLTAL  A+L  +AG+P GV+N++
Sbjct: 182 CGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNIL 241

Query: 259 SGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDA 318
            G G   G  L+ H DV K+ FTG  + GK + +  A SN+K V+LELGGKSP IIF D 
Sbjct: 242 PGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADC 301

Query: 319 DVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQ 378
           D+++AV++   ++F+N+G+ C A  R +V E ++++FV+K      +  +G+P +     
Sbjct: 302 DLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNH 361

Query: 379 GPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVT 427
           GPQ      +K++ Y + G++  ATL CGG+++   G+F QPTVF+DV 
Sbjct: 362 GPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVE 410

>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520

 Score =  669 bits (1729), Expect = 0.0
 Identities = 139/393 (35%), Positives = 218/393 (55%), Gaps = 7/393 (1%)

Query: 40  STAAVVEEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDR 99
           +     +   +  ++    +  I+G++V++A+  T  + +P   EVI  V+EG  ED +R
Sbjct: 15  TENLYFQSNAMELLKHLSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAER 74

Query: 100 AVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEV 159
           A+  AR+AF+ G W + T   R + +   AD I+++ E LA LET + GK   +S  +++
Sbjct: 75  AILAARRAFESGEWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEES-YADM 133

Query: 160 PMVVRLLHYYAGWADKIHGLTVP-GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAP 218
             +  +  Y+AG ADK  G  +     +   + + EP+GV  QI PWN+PLL  +WK+AP
Sbjct: 134 DDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAP 193

Query: 219 ALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKL 278
           AL  G ++V+K +E TPLT + V +L  E G P G +N++ G G   G  ++ H +VD +
Sbjct: 194 ALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLV 253

Query: 279 SFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQC 338
           SFTG  +TGK + + AA +N+  + LELGGK+P IIFDDAD + AV+ A    +++ GQ 
Sbjct: 254 SFTGGIETGKHIMKNAA-NNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQV 312

Query: 339 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGI 398
           C AGSR  V   + D+F +    R  +  +G+ F +  E GP I  E   K+  Y+    
Sbjct: 313 CSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAK 372

Query: 399 ESNATLECGGDRLGN----RGYFVQPTVFSDVT 427
              AT+  GG R        G F +PTV ++  
Sbjct: 373 AEGATIAVGGKRPDRDDLKDGLFFEPTVITNCD 405

>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528

 Score =  664 bits (1715), Expect = 0.0
 Identities = 158/392 (40%), Positives = 224/392 (57%), Gaps = 6/392 (1%)

Query: 40  STAAVVEEPIIPPVQIS-YTKNLINGQFVDAASGKTFPVYDP-RTAEVIANVAEGDAEDI 97
            +  +  +   P ++I    + L++G+ VDAASG T     P    EV+    E  A+D+
Sbjct: 4   LSNFIAPDSNDPRLRIKSRYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDV 63

Query: 98  DRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKS 157
            +AVA ARKAFD GPWP+M+  ERSR+M + ADLI    EELA +E+   GKP  Q+ + 
Sbjct: 64  RKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILARQEELALIESLEVGKPIAQA-RG 122

Query: 158 EVPMVVRLLHYYAGWADKIHGLTVP-GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKV 216
           E+     L  Y AG A  + G T      +     L EP+GV G I PWNFP ++ + +V
Sbjct: 123 EIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASERV 182

Query: 217 APALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVD 276
             A+  G T+VLK +E T  T++ +A+L  EAG+P GV NVV+GYG  AG  LA   +VD
Sbjct: 183 PWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVD 242

Query: 277 KLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQG 336
            ++FTG    G  + E+AA+  +K V LELGGK P I+F DAD+D A +   + +++N G
Sbjct: 243 MVAFTGSVRVGTKLGEIAAR-TVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAG 301

Query: 337 QCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRS 396
           QCC +GSR  V E + D  +E+    + +   GDP     + G  I     +KV  Y+ +
Sbjct: 302 QCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTA 361

Query: 397 GIESNATLECGGDRLGN-RGYFVQPTVFSDVT 427
           GI S A L  GG+R+G   G +  PTVF+ VT
Sbjct: 362 GITSGAELLLGGERIGREAGLYYAPTVFAGVT 393

>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503

 Score =  663 bits (1712), Expect = 0.0
 Identities = 143/384 (37%), Positives = 212/384 (55%), Gaps = 11/384 (2%)

Query: 53  VQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDE-- 110
           + I   +  ING +      K  PV +P T  +I ++     ED+D AVA A+ A     
Sbjct: 3   IPIPTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNK 62

Query: 111 -GPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYY 169
              W   +   R+R +   A  + +   ELA LE+ + GKP  ++   ++  V     YY
Sbjct: 63  GADWATASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEA-AWDIDDVAGCFEYY 121

Query: 170 AGWADKIHGLTVP----GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNT 225
           A  A+K+              +    L EPIGV G I PWN+P+L+ TWKVAPAL  G  
Sbjct: 122 ADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCA 181

Query: 226 IVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCD 285
            +LK +E   LT L + ++  E GLPPGVLN+++G GP AGA LA+H DVDK++FTG   
Sbjct: 182 AILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSA 241

Query: 286 TGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRT 345
           TG  +   AA+  +KPV+LELGGKSP ++F+D D+D+A E A F  F+  GQ C A SR 
Sbjct: 242 TGSKIMTAAAQ-LVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRL 300

Query: 346 YVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLE 405
            +HE +  EF+ +         + DP + G   GP +   Q++K+L+++ +     AT+ 
Sbjct: 301 ILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATIL 360

Query: 406 CGGDRLGN--RGYFVQPTVFSDVT 427
            GG R  +  +G+F++PT+ +DVT
Sbjct: 361 TGGSRPEHLKKGFFIEPTIITDVT 384

>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515

 Score =  656 bits (1694), Expect = 0.0
 Identities = 156/389 (40%), Positives = 222/389 (57%), Gaps = 13/389 (3%)

Query: 47  EPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARK 106
           E +   ++     + I G+FV + SG+TFP  DP T EV+   A G   ++DRA   A +
Sbjct: 16  EEVRRRLKERPALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHE 75

Query: 107 AFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLL 166
           AF    W +    ER R +LR A+LIEK+ +ELA +E  + G+      +++V       
Sbjct: 76  AFQ--RWSRTKAKERKRYLLRIAELIEKHADELAVMECLDAGQVLRIV-RAQVARAAENF 132

Query: 167 HYYAGWADK-IHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNT 225
            +YA +A+  +   T P D ++   T+  P G  G I PWN PL+L TW++APAL  GNT
Sbjct: 133 AFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNT 192

Query: 226 IVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCD 285
           +VLK AE +P TA  +A++  EA LPPGV N+V G+G  AGAAL +H  V  L+ TG  +
Sbjct: 193 VVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETE 252

Query: 286 TGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRT 345
           TGKIV   AA  +LK ++ ELGGKSP ++F DAD+++A++   F +F   G+ C A SR 
Sbjct: 253 TGKIVMRNAA-DHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRL 311

Query: 346 YVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLE 405
            V E+++++FV K   RA    VG P     E GP I PE  Q+VL Y+ +G    A L 
Sbjct: 312 LVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLL 371

Query: 406 CGGDRLG--------NRGYFVQPTVFSDV 426
            GG+R          +RG ++ PTVF   
Sbjct: 372 VGGERAKTSFRGEDLSRGNYLLPTVFVGE 400

>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503

 Score =  655 bits (1692), Expect = 0.0
 Identities = 144/395 (36%), Positives = 214/395 (54%), Gaps = 12/395 (3%)

Query: 40  STAAVVEEPIIPPVQISYTKNLINGQFVDAASGKTF-PVYDPRTAEVIANVAEGDAEDID 98
                +       V ++   N   G+ + +  G T  PV++P T  V+  +    AE++D
Sbjct: 2   QLVDSMPSASTGSVVVTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVD 61

Query: 99  RAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSE 158
           +AV +A+ A+    W KM   ERSR+ML AA +I +  + +A LE  NNGK   ++ + +
Sbjct: 62  QAVQSAQAAYL--KWSKMAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEA-EYD 118

Query: 159 VPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAP 218
           +    + + YYAG A  + G  +   G     T  EP+GV   I+ WN+P ++  WK AP
Sbjct: 119 IDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAP 178

Query: 219 ALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKL 278
           AL CGN +V K +  TP+T + +A++FHEAG+P G++NVV G G   G+ L  H +V K+
Sbjct: 179 ALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKV 237

Query: 279 SFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQC 338
           SFTG   TGK V E++AK  +K VTLELGGKSP +IF D +++ AV  A  A F  QGQ 
Sbjct: 238 SFTGSVPTGKKVMEMSAK-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQV 296

Query: 339 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGI 398
           C  G+R +V   +  +F+E+   R    +VGDP  +    G  I   Q  KVL ++    
Sbjct: 297 CTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAK 356

Query: 399 ESNATLECGGDRLG------NRGYFVQPTVFSDVT 427
           +  A + CGG+ L         GYF+ P V  +  
Sbjct: 357 KEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCR 391

>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517

 Score =  652 bits (1685), Expect = 0.0
 Identities = 147/381 (38%), Positives = 211/381 (55%), Gaps = 9/381 (2%)

Query: 51  PPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDE 110
           P        + I+G +V+  +G  F    P T E+IA +       ++RA+A+A++A   
Sbjct: 8   PLKAQPKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQ-- 65

Query: 111 GPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYA 170
             W  M+P  R RI+ RAAD++ +  + L+ LET + GKP  +++ ++         ++ 
Sbjct: 66  KEWAAMSPMARGRILKRAADIMRERNDALSTLETLDTGKPIQETIVADPTSGADAFEFFG 125

Query: 171 GWA-DKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLK 229
           G A   ++G  +P  G++   T   P+GV   I  WN+P  +  WK APAL  GN +V K
Sbjct: 126 GIAPSALNGDYIPLGGDFAY-TKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFK 184

Query: 230 SAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKI 289
            +E TPL AL +A++  EAGLP G+ NV+ G   T G  L +H DV K+S TG   TG+ 
Sbjct: 185 PSENTPLGALKIAEILIEAGLPKGLFNVIQGDRDT-GPLLVNHPDVAKVSLTGSVPTGRK 243

Query: 290 VQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHE 349
           V   AA  +LK VT+ELGGKSP I+FDDAD++ AV  A    FY+ GQ C  G+R +V +
Sbjct: 244 VAAAAA-GHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQK 302

Query: 350 RVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGG- 408
           +    F+E  K R    I+GDP       GP +   Q +KVL YI  G    ATL  GG 
Sbjct: 303 KAKARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGG 362

Query: 409 --DRLGNRGYFVQPTVFSDVT 427
             + +   G +VQPTVF+DVT
Sbjct: 363 IPNNVAGEGAYVQPTVFADVT 383

>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495

 Score =  643 bits (1661), Expect = 0.0
 Identities = 136/392 (34%), Positives = 201/392 (51%), Gaps = 7/392 (1%)

Query: 38  RFSTAAVVEEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDI 97
                 +    +     +   K LING+ V    G+  PVY+P T +V+  +AE  AE +
Sbjct: 4   HHHHHHLESTSLYKKAGLMQHKLLINGELVSG-EGEKQPVYNPATGDVLLEIAEASAEQV 62

Query: 98  DRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKS 157
           D AV  A  AF    W + TP  R+  +L+ AD+IE+N +  A LE+ N GKP   +   
Sbjct: 63  DAAVRAADAAF--AEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFND 120

Query: 158 EVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKV 216
           E+P +V +  ++AG A  ++GL        +      +P+GV   I PWN+PL++  WK+
Sbjct: 121 EIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKL 180

Query: 217 APALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVD 276
           APAL  GN +VLK +E TPLTAL +A+L  +   P GV+N++ G G T G  L  H  V 
Sbjct: 181 APALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVR 239

Query: 277 KLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQG 336
            +S TG   TG+ +    A S++K   +ELGGK+P I+FDDAD++  VE      +YN G
Sbjct: 240 MVSLTGSIATGEHIISHTA-SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAG 298

Query: 337 QCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRS 396
           Q C A  R Y  + +YD  VEK  A       G P     E GP       ++V + +  
Sbjct: 299 QDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEE 358

Query: 397 GI-ESNATLECGGDRLGNRGYFVQPTVFSDVT 427
                +  +  GG++    GY+  PT+ +   
Sbjct: 359 AKATGHIKVITGGEKRKGNGYYYAPTLLAGAL 390

>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498

 Score =  636 bits (1644), Expect = 0.0
 Identities = 137/390 (35%), Positives = 198/390 (50%), Gaps = 7/390 (1%)

Query: 40  STAAVVEEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDR 99
           S+   +    +    +  T+ LI  +F  A +     + +PRT   I ++AE     ID 
Sbjct: 8   SSGVDLGTENLYFQSMMDTQLLIGSRFE-AGTEAEEHILNPRTGAGIIDLAEASHAQIDA 66

Query: 100 AVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEV 159
           AV  A +AF    W + TP ERS  +L+ AD IEK  +E AALE  N GKP       E+
Sbjct: 67  AVDAAERAFV--GWSQTTPAERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDEL 124

Query: 160 PMVVRLLHYYAGWADKIHGLTV-PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAP 218
           P ++    ++AG    +H          +      +PIG+ G I PWN+PL++  WK+AP
Sbjct: 125 PAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAP 184

Query: 219 ALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKL 278
           A+  GNT+V K +EQTPLTAL +A+L  +  LP GV+NV++G G T G AL +H  V  +
Sbjct: 185 AIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMV 243

Query: 279 SFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQC 338
           S TG   TGK V   AAK  +K   LELGGK+P I++ DAD++  V       +YN GQ 
Sbjct: 244 SITGDIATGKKVLAAAAK-TVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQD 302

Query: 339 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGI 398
           C A  R Y    +Y++ V    +            +  E GP I   Q  +V  ++    
Sbjct: 303 CTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAA 362

Query: 399 -ESNATLECGGDRLGNRGYFVQPTVFSDVT 427
            + +  +  GG    + G+F QPTV +  T
Sbjct: 363 DQKHIEITTGGRTGSDEGFFFQPTVVAGAT 392

>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495

 Score =  596 bits (1538), Expect = 0.0
 Identities = 146/375 (38%), Positives = 191/375 (50%), Gaps = 4/375 (1%)

Query: 55  ISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWP 114
             Y K  I G++   ++     V  P T E +  V    A D+D AVA AR AFD GPWP
Sbjct: 6   TEYDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWP 65

Query: 115 KMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWAD 174
              P+ER+ ++  A  ++ +  +    L     G+P            +  ++Y+AG AD
Sbjct: 66  STPPHERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAAD 125

Query: 175 KIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQT 234
           K+                 EP+GV G IV WN PL L   K+APAL  G TIVLK A +T
Sbjct: 126 KVTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAET 185

Query: 235 PLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA 294
           PLTA  +A++F E GLP GVL+VV G G   G AL S+ D+D  +FTG    G+ V   A
Sbjct: 186 PLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGRRA 244

Query: 295 AKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDE 354
           A+  LKP TLELGGKS  II +D D+  A+ +  F+   N GQ C   +R       YDE
Sbjct: 245 AE-MLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDE 303

Query: 355 FVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG-- 412
            V           VG P     + GP I  +Q  +V  YI  GIE  A L CGG R    
Sbjct: 304 IVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGL 363

Query: 413 NRGYFVQPTVFSDVT 427
           + G+F+QPTVF+DV 
Sbjct: 364 DNGFFIQPTVFADVD 378

>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538

 Score =  581 bits (1500), Expect = 0.0
 Identities = 121/378 (32%), Positives = 194/378 (51%), Gaps = 13/378 (3%)

Query: 57  YTKNLINGQFVDAASGKTFPVYDP-RTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPK 115
               +ING+ V   +      ++P R  +++ +V++ + +  ++A+ +A +AF    W  
Sbjct: 37  EYPLIINGERVT--TEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQ--TWRN 92

Query: 116 MTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADK 175
           + P ER+ I+++AA +I +   E +A      GKP+ ++  ++    +  L YYA    +
Sbjct: 93  VNPEERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKEA-DADTAEAIDFLEYYARQMIE 151

Query: 176 IH-GLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQT 234
           ++ G  +        +  + P+GV   I PWNF L +        +  GNT+VLK A  T
Sbjct: 152 LNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTT 211

Query: 235 PLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA 294
           P+ A    ++  +AGLP GV+N V G G   G  L  H     ++FTG  D G  + E A
Sbjct: 212 PVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERA 271

Query: 295 AK-----SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHE 349
           A      ++LK V +E+GGK   ++  DAD+D A E    + F   GQ C AGSR  +H+
Sbjct: 272 AVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHK 331

Query: 350 RVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGD 409
            VYDE +EK  A A    VGDP       GP ID + F+K++ YI  G +    L  GG+
Sbjct: 332 DVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKE-GRLMTGGE 390

Query: 410 RLGNRGYFVQPTVFSDVT 427
              + G+F+QPT+ +D+ 
Sbjct: 391 GDSSTGFFIQPTIIADLD 408

>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497

 Score =  579 bits (1494), Expect = 0.0
 Identities = 136/389 (34%), Positives = 206/389 (52%), Gaps = 7/389 (1%)

Query: 42  AAVVEEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAV 101
             +  +   P   ++  K  ING + D ++     V DP T E  A ++ G   D D+A+
Sbjct: 10  GTLEAQTQGPGSMLNKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAI 69

Query: 102 ATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPM 161
             A+KAF    W   +P+ER   + +  ++ EK   ++A   +   G P   +L ++   
Sbjct: 70  NAAKKAFQ--TWKTTSPHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTAT 127

Query: 162 VVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALT 221
               +  +     +        +GN      ++ IGV G I PWN+P+   T KV PAL 
Sbjct: 128 GSSHIRNFIKAYKEFSFQEALIEGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALL 187

Query: 222 CGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFT 281
            G T+VLK +E  PL+A+  A++  EA LP GV N+++G G   G+ L++H D++ +SFT
Sbjct: 188 AGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFT 247

Query: 282 GHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCA 341
           G    GK + + A+   LK V LELGGK   IIF DAD+D A++      FYN GQ C A
Sbjct: 248 GSTRAGKDISKNASN-TLKRVCLELGGKGANIIFADADID-ALQRGVRHCFYNSGQSCNA 305

Query: 342 GSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESN 401
            +R  V + +YD+ ++ AK  A +  VG   ++G   GP +  EQ+ K+   I+SGI+  
Sbjct: 306 PTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEG 365

Query: 402 ATLECGGDRLG---NRGYFVQPTVFSDVT 427
           ATL  GG  L     RGY+V+PTVF+DV 
Sbjct: 366 ATLVTGGTGLPMGMERGYYVRPTVFADVK 394

>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478

 Score =  570 bits (1472), Expect = 0.0
 Identities = 133/376 (35%), Positives = 197/376 (52%), Gaps = 10/376 (2%)

Query: 55  ISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWP 114
             YTK  ING++V++ S +T  V +P T EVI  VA+G+  D+D+AV  A   + E  + 
Sbjct: 5   RDYTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLE--FR 62

Query: 115 KMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWAD 174
             +  ER  ++ +     E   +++    T   G P   S +    M +          D
Sbjct: 63  HTSVKERQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALD 122

Query: 175 KIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQT 234
                   GD       + E IGV+G I PWNFP    + K+A A   G+ +VLK +E+T
Sbjct: 123 NYEFEERRGDD----LVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEET 178

Query: 235 PLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA 294
           P  A+ +A++F + G+P GV N+V+G G   G  L+ H  V  +SFTG   TG  + E A
Sbjct: 179 PFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKA 238

Query: 295 AKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDE 354
           AK + K V+LELGGKSP+I+ DD D+ +A +     +  N GQ C AG+R  V  ++ D 
Sbjct: 239 AK-DFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDA 297

Query: 355 FVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG-- 412
           F+ + K +  +  VG+P + G + GP I  +QF +V  YI  GIE  A L  GG      
Sbjct: 298 FLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEG 357

Query: 413 -NRGYFVQPTVFSDVT 427
             +GYF +PT+F +V 
Sbjct: 358 LEKGYFARPTIFINVD 373

>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516

 Score =  560 bits (1446), Expect = 0.0
 Identities = 121/379 (31%), Positives = 188/379 (49%), Gaps = 15/379 (3%)

Query: 57  YTKNLINGQFVDAASGKTFPVYDP-RTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPK 115
           +    I G++VD  + +     +P   +EV+   A+    + + A+  A KAF    W  
Sbjct: 37  HYPLYIGGEWVD--TKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK--TWKD 92

Query: 116 MTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADK 175
               +RSR++L+AA L+ +   EL A   +  GK +V++  ++V   +  + YYA  A +
Sbjct: 93  WPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEA-SADVAEAIDFIEYYARAALR 151

Query: 176 IHGLTVPGDG--NYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQ 233
                V          ++ + P+G    I PWNFP+ +FT  +   +  GNT++ K AE 
Sbjct: 152 YRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAED 211

Query: 234 TPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQEL 293
             +    V ++FHEAG PPGV+N + G G   GA L  H  +  ++FTG  + G  + E 
Sbjct: 212 AVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEA 271

Query: 294 AAK-----SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVH 348
           A +     +  K   +E GGK+  I+ + AD D A E    + +  QGQ C A SR  + 
Sbjct: 272 AGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILT 331

Query: 349 ERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGG 408
           +  Y+  +E+   RA R  VG P +   + GP +  EQ +KVL YI  G      L  GG
Sbjct: 332 QGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGKNE-GQLVLGG 389

Query: 409 DRLGNRGYFVQPTVFSDVT 427
            RL   GYF+ PTVF++V 
Sbjct: 390 KRLEGEGYFIAPTVFTEVP 408

>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508

 Score =  540 bits (1393), Expect = 0.0
 Identities = 132/376 (35%), Positives = 186/376 (49%), Gaps = 9/376 (2%)

Query: 55  ISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWP 114
           I  TK+LI GQ+V+  S +     +P    VIA   +    D+D A   A+KA     W 
Sbjct: 10  IDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQ--AEWA 67

Query: 115 KMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWAD 174
                ERS I+ RAA+L+E++ EE+       +G    ++   E+ +   +    A +  
Sbjct: 68  ATPAAERSAIIYRAAELLEEHREEIVEWLIKESGSTRSKA-NLEITLAGNITKESASFPG 126

Query: 175 KIHGLTVPGDG-NYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQ 233
           ++HG   P +      +      GV G I PWNFPL L    VAPAL  GN +V+K A  
Sbjct: 127 RVHGRISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASD 186

Query: 234 TPLTALYV-AKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE 292
           TP+T   + A++F EAG+P GV++ V+G G   G    +H     +SFTG    G+ V E
Sbjct: 187 TPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGE 246

Query: 293 LAAKS-NLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERV 351
           LA     +K V LELGG +PF++  DAD+D A + A    F +QGQ C + +R  V   V
Sbjct: 247 LAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAV 306

Query: 352 YDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRL 411
           +DEF+EK          GDP   G   GP I+  Q   +   I    +  AT++  G   
Sbjct: 307 HDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI- 365

Query: 412 GNRGYFVQPTVFSDVT 427
              G  V P VFSDVT
Sbjct: 366 --EGRLVHPHVFSDVT 379

>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501

 Score =  491 bits (1266), Expect = e-172
 Identities = 108/392 (27%), Positives = 166/392 (42%), Gaps = 15/392 (3%)

Query: 41  TAAVVEEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRA 100
            A ++E  I     +    + + G++    SG+   V  P     IA V     E+++R 
Sbjct: 2   RAGLLEGVIKEKGGVPVYPSYLAGEWGG--SGQEIEVKSPIDLATIAKVISPSREEVERT 59

Query: 101 VATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVP 160
           +    K         M   ER  ++ +AAD+IE+N++  A +   N GKP   +   EV 
Sbjct: 60  LDVLFKRGRW-SARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAA-VGEVK 117

Query: 161 MVVRLLHYYAGWADKIHGLTVPGDG-----NYHIQTLHEPIGVAGQIVPWNFPLLLFTWK 215
             V  L        KI G  +PGD              EP+GV   I P+N+PL     K
Sbjct: 118 AAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNK 177

Query: 216 VAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDV 275
           +  +   GN +V+K +   PL A    K   +AG PP  + +++  G      + +   V
Sbjct: 178 ITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKE-AEKIVADDRV 236

Query: 276 DKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQ 335
             +SFTG  + G+    +     +K   +ELGG  P I+ +DAD+D A +     ++   
Sbjct: 237 AAVSFTGSTEVGER---VVKVGGVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYA 293

Query: 336 GQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIR 395
           GQ C A         VY + VE+   R     VGDP    V+ GP I P    +++  I 
Sbjct: 294 GQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIE 353

Query: 396 SGIESNATLECGGDRLGNRGYFVQPTVFSDVT 427
             +E    +  GG RLG    +VQPT      
Sbjct: 354 DAVEKGGRVLAGGRRLG--PTYVQPTFVEAPA 383

>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505

 Score =  491 bits (1267), Expect = e-172
 Identities = 113/376 (30%), Positives = 179/376 (47%), Gaps = 16/376 (4%)

Query: 58  TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
              L NG++V++ +G+   +  P +   + ++     E+++ A+  A+ A     W    
Sbjct: 12  ANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKI--WKIRP 69

Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
            +ER  ++   ADL+E+  E +  L      KP   +   EV     ++ + A  A +++
Sbjct: 70  IHERVDLLYAWADLLEERKEIIGELIMHEVAKPKKSA-IGEVSRTADIIRHTADEALRLN 128

Query: 178 GLTVPGD------GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSA 231
           G T+ GD               EP+GV   I P+N+P+ L   K+APAL  GNT+V K A
Sbjct: 129 GETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPA 188

Query: 232 EQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQ 291
            Q  L+ + + +   +AG P G++ VV+G G   G  L  H  +D ++FTG   TG+   
Sbjct: 189 TQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGER-- 246

Query: 292 ELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERV 351
            ++ K+ + PV LELGGK P I+ DDAD+           F   GQ C A  R +V + V
Sbjct: 247 -ISEKAKMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSV 305

Query: 352 YDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRL 411
            D+ V   K    +  VG P     +  P ID +    +   I   +E+ ATL  G  R 
Sbjct: 306 ADQLVANIKELVEQLTVGSPED-DADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR- 363

Query: 412 GNRGYFVQPTVFSDVT 427
             +G  + PT+  DVT
Sbjct: 364 --QGNLLSPTLLDDVT 377

>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486

 Score =  481 bits (1240), Expect = e-168
 Identities = 108/371 (29%), Positives = 176/371 (47%), Gaps = 18/371 (4%)

Query: 61  LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYE 120
            I+G++++    +   V +P + EVI  +     E+   A+ TA K  +      +   +
Sbjct: 3   FIDGKWIN---REDMDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEV--MKNLPITK 57

Query: 121 RSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLT 180
           R  I++  A  I++  EELA +   + GKP  Q+ + EV   +      A +  +     
Sbjct: 58  RYNILMNIAKQIKEKKEELAKILAIDAGKPIKQA-RVEVERSIGTFKLAAFYVKEHRDEV 116

Query: 181 VPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALY 240
           +P D +  I T  EP+G+ G I P+NFPL L   K+APA+  GN IV   + + PL  + 
Sbjct: 117 IPSD-DRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIE 175

Query: 241 VAKLFHEA----GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
           +AK+   A     +P GV N+++G G   G  +  +  V+ +SFTG    G++   +  K
Sbjct: 176 LAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGEL---ITKK 232

Query: 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 356
           +  K + LELGG +P I+  DAD+++AV       F   GQ C +     V E + D+F+
Sbjct: 233 AGFKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFI 292

Query: 357 EKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGY 416
           E    +A    VG+P     + GP I  E  + V + +   I+    L  GG R      
Sbjct: 293 EMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR---DKA 349

Query: 417 FVQPTVFSDVT 427
              PT+  +V 
Sbjct: 350 LFYPTIL-EVD 359

>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490

 Score =  476 bits (1227), Expect = e-166
 Identities = 106/372 (28%), Positives = 164/372 (44%), Gaps = 8/372 (2%)

Query: 58  TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
           + + I GQ++ A  G+T    DP    V+ +    DA  +D AV  AR+AF    W +  
Sbjct: 6   STHYIAGQWL-AGQGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPA--WARRP 62

Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
             +R  ++ R A  ++   +ELA +     GKP  +S  +EV  +V  +        +  
Sbjct: 63  LEQRIELLERFAATLKSRADELARVIGEETGKPLWES-ATEVTSMVNKVAISVQAFRERT 121

Query: 178 GLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLT 237
           G       +      H+P GV     P+NFP  L    + PAL  GN +V K +E TP  
Sbjct: 122 GEKSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKV 181

Query: 238 ALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKS 297
           A    K + +AGLP GVLN+V G G   G ALA+H  +D L FTG   TG ++       
Sbjct: 182 AELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQ 240

Query: 298 NLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVY-DEFV 356
             K + LE+GG +P ++ + AD+D AV     + F + GQ C    R  V +  + D  +
Sbjct: 241 PQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALL 300

Query: 357 EKAKARAMRRIVGDPF-KSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRG 415
            +  A +    VG    +     G  I     + +L+     I   A       +  +  
Sbjct: 301 ARLVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGA 360

Query: 416 YFVQPTVFSDVT 427
             + P +  DV+
Sbjct: 361 ALLTPGIL-DVS 371

>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534

 Score =  476 bits (1228), Expect = e-166
 Identities = 87/395 (22%), Positives = 143/395 (36%), Gaps = 29/395 (7%)

Query: 57  YTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKM 116
             KN + GQ++ A +G    + DP T   +  V+    +                    +
Sbjct: 7   LLKNHVAGQWI-AGTGAGITLTDPVTGVALVRVSSEGLDLARAFSFAREDGG--AALRAL 63

Query: 117 TPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKI 176
           T  +R+  +     L++    +  A+ T N+G     S   ++   +  L YYA     +
Sbjct: 64  TYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDS-AVDIDGGIFTLSYYAKLGASL 122

Query: 177 HGLTVPGDGN----------YHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTI 226
             +    DG+               L    GVA  I  +NFP      K APAL  G  +
Sbjct: 123 GEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPV 182

Query: 227 VLKSAEQTPLTALYVAKLFHEAG-LPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCD 285
           ++K A  T      +     +AG LPPG L+++ G   ++   L      D +SFTG  D
Sbjct: 183 IVKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQIRSFDVVSFTGSAD 239

Query: 286 TGKIVQELAAKS-NLKPVTLELGGKSPFIIFDDADV-----DQAVELAHFALFYNQGQCC 339
           T   ++   A       + ++    +  I+  DA       D  ++     +    GQ C
Sbjct: 240 TAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKC 299

Query: 340 CAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIE 399
            A  R +V E   +  +E  KA+  +  VG+P    V  G  +  EQ++ VL  I +  E
Sbjct: 300 TAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALRE 359

Query: 400 SNATLECGGDRL-----GNRGYFVQPTVFSDVTVS 429
                             N    V P +F      
Sbjct: 360 EAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPD 394

>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479

 Score =  438 bits (1128), Expect = e-151
 Identities = 126/372 (33%), Positives = 186/372 (50%), Gaps = 6/372 (1%)

Query: 58  TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
               I+GQFV         V +P T  VI+ + +G AED  +A+  A +A  E  W  + 
Sbjct: 7   HPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPE--WEALP 64

Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
             ER+  + + +  I +   E++AL     GK    + + EV      + Y A WA +  
Sbjct: 65  AIERASWLRKISAGIRERASEISALIVEEGGKIQQLA-EVEVAFTADYIDYMAEWARRYE 123

Query: 178 GLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
           G  +  D    +I      +GV   I+PWNFP  L   K+APAL  GNTIV+K +E TP 
Sbjct: 124 GEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPN 183

Query: 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
            A+  AK+  E GLP GV N+V G G T G  LA +  V  +S TG    G+ +   AA 
Sbjct: 184 NAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAA- 242

Query: 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 356
            N+  V LELGGK+P I+ DDAD++ AV+    +   N GQ C    R YV + +YD+FV
Sbjct: 243 KNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFV 302

Query: 357 EKAKARAMRRIVGDPF-KSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRG 415
            +          G+P  ++ +  GP I+    ++V + +   +E  A +  GG  +  +G
Sbjct: 303 NRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKG 362

Query: 416 YFVQPTVFSDVT 427
           Y+  PT+  DV 
Sbjct: 363 YYYPPTLLLDVR 374

>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475

 Score =  433 bits (1116), Expect = e-149
 Identities = 108/376 (28%), Positives = 177/376 (47%), Gaps = 18/376 (4%)

Query: 58  TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
            KN +NG++    S     +Y+P +   + +V     E++D   A+A+KA     W  ++
Sbjct: 5   YKNYVNGEWKL--SENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPA--WRALS 60

Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
             ER+  + + AD++ ++ E++ A+ +    K Y  +  SEV     +++Y A    ++ 
Sbjct: 61  YIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSA-VSEVVRTAEIINYAAEEGLRME 119

Query: 178 GLTVPGDG------NYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSA 231
           G  + G                EP+G+   I P+N+P+ L   K+APAL  GN I  K  
Sbjct: 120 GEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPP 179

Query: 232 EQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQ 291
            Q  ++ L +A+ F EAGLP GV N ++G G   G  +  H  V+ ++FTG    G+   
Sbjct: 180 TQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGER-- 237

Query: 292 ELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERV 351
            +   + ++P+ LELGGK   I+ +DAD++   +      F   GQ C A  R  V E V
Sbjct: 238 -IGKMAGMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESV 296

Query: 352 YDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRL 411
            DE VEK + + +   +G+P     +  P ID +    V   I    +  AT      R 
Sbjct: 297 ADELVEKIREKVLALTIGNPED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKR- 354

Query: 412 GNRGYFVQPTVFSDVT 427
              G  + P +F  VT
Sbjct: 355 --EGNLICPILFDKVT 368

>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485

 Score =  426 bits (1098), Expect = e-147
 Identities = 119/375 (31%), Positives = 182/375 (48%), Gaps = 10/375 (2%)

Query: 56  SYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPK 115
           +  K+ ING++    SG+T  + +P    VI   +    + ++ A   A+KA  E  W K
Sbjct: 5   TLNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKE--WAK 62

Query: 116 MTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADK 175
            T  +R  ++ +A   + +N +++  +     G   ++S   E+   + +L     +  +
Sbjct: 63  STTEDRKAVLQKARGYLHENRDDIIMMIARETGGTIIKS-TIELEQTIAILDEAMTYTGE 121

Query: 176 IHGL-TVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQ 233
           + G+  VP D      +    P+GV   I P+NFP+ L    +APA+  GN++V K   Q
Sbjct: 122 LGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQ 181

Query: 234 TPLTA-LYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE 292
           T ++    +AK F  AGLP GVLNV+       G  + ++     +SFTG    G+ + E
Sbjct: 182 TAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGE 241

Query: 293 LAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVY 352
           +A     K + LELGG +PF +  DADVD+AV+ A F  F +QGQ C   +R  VH+ VY
Sbjct: 242 IAG-RAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVY 300

Query: 353 DEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG 412
           DEFVEK  AR  +   GD        GP I+  Q +K L  I         L   G R+G
Sbjct: 301 DEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKRVG 360

Query: 413 NRGYFVQPTVFSDVT 427
           N    + P VF    
Sbjct: 361 N---VLTPYVFVGAD 372

>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026

 Score =  421 bits (1085), Expect = e-138
 Identities = 117/375 (31%), Positives = 176/375 (46%), Gaps = 13/375 (3%)

Query: 60  NLINGQFVDAASGKTFPVYDP-RTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
             ING+ V   +    P  +P + +EV+  + +    ++  A+A A+ AF    W    P
Sbjct: 534 LFINGKEVR--TNDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFPA--WRDTDP 589

Query: 119 YERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG 178
             R+  +L+AA    K + EL+A +    GK + Q+  ++V   +  L YYA    ++  
Sbjct: 590 RTRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQAY-ADVTEAIDFLEYYAREMIRLGQ 648

Query: 179 -LTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLT 237
              V           +EP GVA  I PWNFPL +     + A+  GN +V K +  T + 
Sbjct: 649 PQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSII 708

Query: 238 ALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK- 296
             ++ +LF EAGLP GV N   G G   G  L  H D+  ++FTG  +TG  + E AAK 
Sbjct: 709 GWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKV 768

Query: 297 ----SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVY 352
               +N+K +  E+GGK+  II DDAD+D+AV    ++ F  QGQ C A SR  V + VY
Sbjct: 769 HPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVY 828

Query: 353 DEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG 412
           D+F+E+  + A    VG         G   D +  + +  Y   G      L        
Sbjct: 829 DKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREGHVLYESPVP-A 887

Query: 413 NRGYFVQPTVFSDVT 427
             GYFV  T+   + 
Sbjct: 888 GEGYFVPMTIIGGIK 902

>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500

 Score =  405 bits (1042), Expect = e-138
 Identities = 105/375 (28%), Positives = 170/375 (45%), Gaps = 12/375 (3%)

Query: 58  TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
            + + NG +     G+    Y P   E IA V +    D +  V  AR+A+    W  + 
Sbjct: 24  NEGVYNGSWGG--RGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWKI--WADIP 79

Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
             +R  I+ +  D + + ++ L +L +   GK  V+    EV   V +  Y  G +  I 
Sbjct: 80  APKRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEG-VGEVQEYVDICDYAVGLSRMIG 138

Query: 178 GLTVPGDGNYH-IQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
           G  +P + + H +     P+G+ G I  +NFP+ ++ W  A A+ CGN  + K A  T L
Sbjct: 139 GPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSL 198

Query: 237 TALYVAKLFHEA----GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE 292
            ++ V K+  +      LP  + ++  G G   G A+A    V+ LSFTG    GK V  
Sbjct: 199 ISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGKQVGL 257

Query: 293 LAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVY 352
           +  +       LELGG +  I F+DAD+   V  A FA     GQ C    R ++HE ++
Sbjct: 258 MVQER-FGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIH 316

Query: 353 DEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG 412
           DE V + K    +  VG+P+   V  GP    +     L  +    +   T+  GG  + 
Sbjct: 317 DEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMD 376

Query: 413 NRGYFVQPTVFSDVT 427
             G +V+PT+ + + 
Sbjct: 377 RPGNYVEPTIVTGLG 391

>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497

 Score =  398 bits (1025), Expect = e-135
 Identities = 125/375 (33%), Positives = 179/375 (47%), Gaps = 9/375 (2%)

Query: 58  TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
             N I GQ+V +    T  +  P T +VI  +  G   D + A+  A+ A     W K+T
Sbjct: 13  KVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKA--WAKLT 70

Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
              R  ++   A+ I +N   LA +     GK    + + EV +    + Y    A  I 
Sbjct: 71  ARTRQNMLRTFANKIRENKHILAPMLVAEQGKLLSVA-EMEVDVTATFIDYGCDNALTIE 129

Query: 178 GLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
           G  +P  + +  I     P GV   I  WNFPL L   K+ PAL  GNT+VLK  ++TPL
Sbjct: 130 GDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPL 189

Query: 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
               + ++  EAGLP GVLNV++G G   G  L        ++ TG    GK + + +A 
Sbjct: 190 ATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSA- 248

Query: 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 356
             + PV LELGGK+P ++ DDAD+D+A E A +  F N GQ C    R YVH  VYDEF+
Sbjct: 249 EYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFM 308

Query: 357 EKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNR-- 414
            K         VGDP  +  + GP+ +  +   +   +   I+  AT+  GG        
Sbjct: 309 AKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGF 368

Query: 415 --GYFVQPTVFSDVT 427
             G + +PTV  DV 
Sbjct: 369 EGGCWYEPTVLVDVK 383

>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481

 Score =  393 bits (1012), Expect = e-134
 Identities = 142/371 (38%), Positives = 209/371 (56%), Gaps = 5/371 (1%)

Query: 58  TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
            + LING+++DA +G+   V +P   + + +V +  A++   A+  A +A     W  +T
Sbjct: 10  QQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPA--WRALT 67

Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
             ER+ I+    +L+ ++ ++LA L T   GKP  ++ K E+      + ++A    +I+
Sbjct: 68  AKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEA-KGEISYAASFIEWFAEEGKRIY 126

Query: 178 GLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
           G T+PG   +  +  + +PIGV   I PWNFP  + T K  PAL  G T+VLK A QTP 
Sbjct: 127 GDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPF 186

Query: 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
           +AL +A+L   AG+P GV NVV+G     G  L S+  V KLSFTG  + G+ + E  A 
Sbjct: 187 SALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCA- 245

Query: 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 356
            ++K V+LELGG +PFI+FDDAD+D+AVE A  + F N GQ C   +R YV + VYD F 
Sbjct: 246 KDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFA 305

Query: 357 EKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGY 416
           EK +    +  +GD   +GV  GP ID +   KV  +I   +E  A + CGG      G 
Sbjct: 306 EKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGN 365

Query: 417 FVQPTVFSDVT 427
           F QPT+  DV 
Sbjct: 366 FFQPTILVDVP 376

>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484

 Score =  393 bits (1012), Expect = e-134
 Identities = 144/371 (38%), Positives = 201/371 (54%), Gaps = 5/371 (1%)

Query: 58  TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
            +  I G++  A S  TF V+DP T E +  V +  A +  RA+  A+ A+    W   T
Sbjct: 13  HQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAG--WRMKT 70

Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
             ER+ I+ R  DL+  N ++LA + T   GKP  ++ K E+      + ++A    ++ 
Sbjct: 71  AKERAAILRRWFDLVIANSDDLALILTTEQGKPLAEA-KGEIAYAASFIEWFAEEGKRVA 129

Query: 178 GLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
           G T+P  D N  I  + EPIGV   I PWNFP  +   KV PAL  G  IV+K AE TP 
Sbjct: 130 GDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPF 189

Query: 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
           +AL +A L   AG+P GVL+VV G     G  + S+  V KLSFTG    G+++   +A 
Sbjct: 190 SALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSA- 248

Query: 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 356
             +K +TLELGG +PFI+FDDAD+D AVE A  + + N GQ C   +R +VHERVYD F 
Sbjct: 249 PTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFA 308

Query: 357 EKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGY 416
           +K  A   +  VG   +SG   GP I+    +KV  +I   +   A+L  GG R      
Sbjct: 309 DKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHG 368

Query: 417 FVQPTVFSDVT 427
           F +PTV + V 
Sbjct: 369 FFEPTVLTGVK 379

>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504

 Score =  393 bits (1011), Expect = e-133
 Identities = 137/371 (36%), Positives = 204/371 (54%), Gaps = 7/371 (1%)

Query: 58  TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
           ++ L+NG+++DAA G T  V +P    VI  V       I  A+  + KA     W   T
Sbjct: 33  SQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSG--WAAKT 90

Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
             ER+ I+ +  DLI  N +++A + T   GKP  ++ + EV      + ++A  A +++
Sbjct: 91  AKERAGILRKWFDLIIANADDIALIMTSEQGKPLAEA-RGEVLYAASFIEWFAEEAKRVY 149

Query: 178 GLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
           G T+P       +  + +P+GV   I PWNFP  + T K APAL  G T++++ A+ TPL
Sbjct: 150 GDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPL 209

Query: 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
           TAL +  L  +AG+P GVL +V+G     GA L S+  V KLSFTG  + G+++    A 
Sbjct: 210 TALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCA- 268

Query: 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 356
             +K ++LELGG +PFI+FDDAD+D AV+ A  + + N GQ C   +R YV   VYD+F 
Sbjct: 269 PTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFA 328

Query: 357 EKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGY 416
           EK  A+     VG+  + GV  GP I+ +   KV  +I   +   A L  GG  LG  G 
Sbjct: 329 EKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKELG--GL 386

Query: 417 FVQPTVFSDVT 427
           F +P + + VT
Sbjct: 387 FFEPGILTGVT 397

>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506

 Score =  391 bits (1008), Expect = e-133
 Identities = 122/372 (32%), Positives = 182/372 (48%), Gaps = 6/372 (1%)

Query: 58  TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
               I G++ D+A G TF VY+P T  VIA V     ED+  AV   + A          
Sbjct: 12  LTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALRL--TNPWP 69

Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
              R + +    D +++N EE+  +    +GKP+ ++ + EV        Y A     + 
Sbjct: 70  IETRRKWLEDIRDGLKENREEIGRILCMEHGKPWKEA-QGEVDYAAGFFDYCAKHISALD 128

Query: 178 GLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
             T+P    +      + P+GV G IVPWNFP+ +   K++ AL  G   V+K A +TPL
Sbjct: 129 SHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPASETPL 188

Query: 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
           T +    +  +  LP G++N+V G     G  L  H DV  LSFTG  + G+ +    A 
Sbjct: 189 TMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTA- 247

Query: 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 356
             +K + LELGG +PFI+FDDAD++ A +      F   GQ C   +R +VHE+V D F 
Sbjct: 248 EQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFG 307

Query: 357 EKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGN-RG 415
           +K   R  +  VGD    G++ GP I+ + F KV R+++  ++  A+L  G        G
Sbjct: 308 QKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDG 367

Query: 416 YFVQPTVFSDVT 427
            F  PTV   V 
Sbjct: 368 LFFPPTVVQGVD 379

>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487

 Score =  378 bits (972), Expect = e-127
 Identities = 129/375 (34%), Positives = 205/375 (54%), Gaps = 11/375 (2%)

Query: 58  TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
           T + + G+++ A    TFPV DP +   +  VA+    +   AV  A +AF    W +++
Sbjct: 13  TDSFVGGRWLPA--AATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCR--WREVS 68

Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
             ERS ++ +  +L+ +N ++LA + T  +GKP  ++   E+      L +++  A +++
Sbjct: 69  AKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEA-HGEILYSAFFLEWFSEEARRVY 127

Query: 178 GLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
           G  +     +     L +PIGVA  I PWNFP  + T KV  AL  G T+V+K AE TP 
Sbjct: 128 GDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPF 187

Query: 237 TALYVAKLFHEAGLPPGVLNVV---SGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQEL 293
           +AL +A+L  +AG+P GV NV+          G A+ +   V K+SFTG   TGKI+   
Sbjct: 188 SALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHH 247

Query: 294 AAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYD 353
           AA +++K V++ELGG +PFI+FD A+VDQAV  A  + F N GQ C   ++  V   ++D
Sbjct: 248 AA-NSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHD 306

Query: 354 EFVEKAKARAMRRI-VGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG 412
            FV+       + + VG+ F+ G  QGP I+ +  +KV + +   +   AT+  GG R  
Sbjct: 307 AFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQ 366

Query: 413 NRGYFVQPTVFSDVT 427
               F +PT+  +VT
Sbjct: 367 LGKNFFEPTLLCNVT 381

>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510

 Score =  368 bits (947), Expect = e-123
 Identities = 68/386 (17%), Positives = 127/386 (32%), Gaps = 36/386 (9%)

Query: 67  VDAASGKTFPVYDPRTAEVIAN-VAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIM 125
           ++  +   F   +  T E +          ++++A   A K   +  + ++   +R+ ++
Sbjct: 1   MNPQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARD--FRRLNNSKRASLL 58

Query: 126 LRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD- 184
              A  +E   +++ A        P V+ L  E+      L  +A   +         D 
Sbjct: 59  RTIASELEARSDDIIARAHLETALPEVR-LTGEIARTANQLRLFADVVNSGSYHQAILDT 117

Query: 185 --------GNYHIQTLHEPIGVAGQIVPWNFPLLLFT--WKVAPALTCGNTIVLKSAEQT 234
                       I+     +G        NFPL         A AL  G  +++K     
Sbjct: 118 PNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAH 177

Query: 235 PLTALYVAKLFHEA----GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIV 290
           P T+  VA+   +A     LP  +  ++ G     G AL SH ++  + FTG    G+ +
Sbjct: 178 PGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRAL 237

Query: 291 QELAAKS-NLKPVTLELGGKSPFIIFDDADVDQA--VELAHFALFYNQGQCCCAGSRTYV 347
             LA +     P   ELG  +P  IF  A   +A   +    ++    GQ C      + 
Sbjct: 238 FNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFA 297

Query: 348 HER-VYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLEC 406
                   F+E A++                  P I      +V   +  G +    +  
Sbjct: 298 LNTPETQAFIETAQSL------IRQQSPSTLLTPGIRDSYQSQV---VSRGSDDGIDVTF 348

Query: 407 GGDRLGNRGYFVQPTVFSDVTVSFIS 432
                      V   +F   + ++  
Sbjct: 349 SQA----ESPCVASALFVTSSENWRK 370

>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462

 Score =  345 bits (887), Expect = e-115
 Identities = 96/359 (26%), Positives = 159/359 (44%), Gaps = 5/359 (1%)

Query: 69  AASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRA 128
             +       +P T + +A +   +A++I+ A++ A   F +  W   +  +R++ +   
Sbjct: 3   MMTATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFKK--WKMTSVAQRAQTLRDI 60

Query: 129 ADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYH 188
              +  + EE+A   T   GKP  Q+ ++EV     L  +YA     +         N  
Sbjct: 61  GQALRAHAEEMAQCITREMGKPIKQA-RAEVTKSAALCDWYAEHGPAMLNPEPTLVENQQ 119

Query: 189 IQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEA 248
               + P+GV   I+PWNFPL        P L  GN+ +LK A      A  +A++  EA
Sbjct: 120 AVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQMIARILAEA 179

Query: 249 GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGG 308
           G P GV   V+         +     +  ++ TG    G  +   A    LK   LELGG
Sbjct: 180 GTPAGVYGWVNANNEGVSQMIN-DPRIAAVTVTGSVRAGAAIGAQAGA-ALKKCVLELGG 237

Query: 309 KSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIV 368
             PFI+ +DAD++ AV+ A    + N GQ C A  R  V E +   F ++  A A    +
Sbjct: 238 SDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKM 297

Query: 369 GDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVT 427
           GDP     + GP    +   ++ + +++ +   A L  GG+++   G +   TV +DVT
Sbjct: 298 GDPLVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVT 356

>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484

 Score =  344 bits (884), Expect = e-114
 Identities = 100/354 (28%), Positives = 158/354 (44%), Gaps = 5/354 (1%)

Query: 74  TFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIE 133
            +   +P T E  A+     ++ ID A+  A   + +  W    P  R+ I+   A+ ++
Sbjct: 5   KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKK--WRHEEPASRAEILHDIANALK 62

Query: 134 KNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLH 193
           ++ +ELA + T   GK   +S K EV + V + +YYA    ++   T       +   L 
Sbjct: 63  EHEDELAKMMTLEMGKLLSES-KEEVELCVSICNYYADHGPEMLKPTKLNSDLGNAYYLK 121

Query: 194 EPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPG 253
           +  GV     PWNFPL       AP    GN I+LK A   P +A   AK+   AG P G
Sbjct: 122 QSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEG 181

Query: 254 VLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFI 313
            L  +          +A    +  ++ TG    G  V E A K NLK  T+ELGG   FI
Sbjct: 182 SLINLYPSYDQLADIIA-DPRIQGVALTGSERGGSAVAEAAGK-NLKKSTMELGGNDAFI 239

Query: 314 IFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFK 373
           + DDAD      + + A  YN GQ C +  R  V +  YDE + + K        GDP +
Sbjct: 240 VLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLE 299

Query: 374 SGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVT 427
           +     P    +  +K+   ++  I++ A +      + ++G F +PT+ +D+ 
Sbjct: 300 ADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIA 353

>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452

 Score =  326 bits (837), Expect = e-108
 Identities = 69/343 (20%), Positives = 122/343 (35%), Gaps = 19/343 (5%)

Query: 89  VAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNG 148
           +   +  ++D  +A  +KA +E  +   +  +  +I   A+    +    LA      +G
Sbjct: 1   MPVTNMAELDAMIARVKKAQEE--FATYSQEQVDKIFRAASLAANQARIPLAQQAVEESG 58

Query: 149 KPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFP 208
              V+  K           Y     ++  G  +  D N    T+ EP+G+   IVP   P
Sbjct: 59  MGIVED-KVIKNHFASEFIYNKYKDEQTCG-ILEEDDNLGTMTIAEPVGIICGIVPTTNP 116

Query: 209 LLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEA----GLPPGVLNVVSGYGPT 264
                +K   +L   N I+     +   +    AKL  +A    G P  ++  +      
Sbjct: 117 TSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSVE 176

Query: 265 AGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAV 324
              AL  H D+  +  TG     K     AA S+ KP      G  P +I + AD+ +AV
Sbjct: 177 LSNALMKHDDIALILATGGPGMVK-----AAYSSGKPAIGVGAGNVPVVIDETADIKRAV 231

Query: 325 ELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDP 384
                +  ++ G  C +     V + VYDE  E+  +     +        V +   ID 
Sbjct: 232 ASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASHKAHVLSKTDADK-VRKVLLIDG 290

Query: 385 EQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVT 427
               K++    + I   A ++   D        +       V+
Sbjct: 291 ALNAKIVGQPATAIAEMAGVKVPAD-----TKVLIGEGLGKVS 328

>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001

 Score =  318 bits (816), Expect = 3e-99
 Identities = 107/365 (29%), Positives = 151/365 (41%), Gaps = 11/365 (3%)

Query: 66  FVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIM 125
           F    +              +  +A+   +    AVA AR  F    W +     R+  +
Sbjct: 521 FGARTALDQLLTDVKAETGDLKPIADATPDQAHAAVAAARAGFAG--WSRTPAGIRAAAL 578

Query: 126 LRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG--LTVPG 183
            +AA L+E       AL     GK    +L SE+        YYA    K+ G    +PG
Sbjct: 579 EQAAHLLESRSAHFIALLQREGGKTLDDAL-SELREAADFCRYYAAQGRKLFGSETAMPG 637

Query: 184 DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAK 243
                        GV   I PWNFPL +F  +V  AL  GN++V K AEQTP  A     
Sbjct: 638 PTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVA 697

Query: 244 LFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN--LKP 301
           L HEAG+P   L +V+G G   GAAL +H D+  + FTG  +  + +    A  +  + P
Sbjct: 698 LLHEAGIPKSALYLVTGDGR-IGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVP 756

Query: 302 VTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKA 361
           +  E GG +  I    A  +Q  +    + F + GQ C A    +V E V D  +E    
Sbjct: 757 LIAETGGINAMIADATALPEQVADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAG 816

Query: 362 RAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPT 421
            A    +GDP       GP ID E  Q++  +I    ++ A L   G      G FV P 
Sbjct: 817 AARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARM-KTEARLHFAGPA--PEGCFVAPH 873

Query: 422 VFSDV 426
           +F   
Sbjct: 874 IFELT 878

>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528

 Score =  304 bits (781), Expect = 1e-98
 Identities = 86/396 (21%), Positives = 139/396 (35%), Gaps = 41/396 (10%)

Query: 58  TKNLINGQFVDAA-SGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKM 116
            K+L+ G+++D A +  + P + P     +     G  E ++RA   A +AF    +   
Sbjct: 30  GKHLVAGEWLDGAGTFASAPAHGPAHDFAV-----GTVELVNRACEAAEEAFWT--YGYS 82

Query: 117 TPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAG----- 171
           +  ER+  +   AD IE   E +  + +   G P  + L  E       L  +A      
Sbjct: 83  SRKERAAFLRAIADEIEARAEAITEIGSQETGLPEAR-LNGERGRTTGQLRLFADHIEKG 141

Query: 172 -WADKIHGLTVPG---DGNYHIQTLHEPIGVAGQIVPWNFPLLLFT--WKVAPALTCGNT 225
            + D+     +P         I+ +  P+G        NFPL   T     A AL  G  
Sbjct: 142 DYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCP 201

Query: 226 IVLKSAEQTPLTALYVAKLFHEA----GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFT 281
           +V+K     P T   VA+    A    G+ PGV +++ G     G AL  H  +  + FT
Sbjct: 202 VVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFT 261

Query: 282 GHCDTGKIVQELAAKS-NLKPVTLELGGKSPFIIFDDADVDQAVELAHFA---LFYNQGQ 337
           G    G+ + +L A      P   ELG  +P  +  +A   +A  L       L    GQ
Sbjct: 262 GSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQ 321

Query: 338 CCCAGSRTYVHERV-YDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRS 396
            C       V E    D F   A     +         G+ +  +    +F         
Sbjct: 322 FCTNPGIAVVIEGADADRFTTAAVEALAKVAPQTMLTDGIAKAYRDGQARFAT------- 374

Query: 397 GIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFIS 432
              +        +     G    P +F      F++
Sbjct: 375 --RNAVKPLLATES---SGRDASPNLFETTGAQFLA 405

>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486

 Score =  291 bits (746), Expect = 8e-94
 Identities = 125/372 (33%), Positives = 190/372 (51%), Gaps = 7/372 (1%)

Query: 58  TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
            KN ING++V++ + +   V +P T EV+  V     EDID A  TA +AF    W K+ 
Sbjct: 6   LKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKT--WSKVA 63

Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
              R+RI+     L+ ++ EELA L T  NGK   ++   EV   +  + + AG    + 
Sbjct: 64  VPRRARILFNFQQLLSQHKEELAHLITIENGKNTKEA-LGEVGRGIENVEFAAGAPSLMM 122

Query: 178 GLTVPGDG-NYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
           G ++     +        PIGV G I P+NFP+++  W    A+  GNT +LK +E+TPL
Sbjct: 123 GDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPL 182

Query: 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
               + +LF +AGLP GV NVV G        +  H ++  +SF G    G+ V +  ++
Sbjct: 183 LTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSE 241

Query: 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 356
            NLK V    G K+  I+ +DA+++  V     A F + G+ C A +   V E + DEF+
Sbjct: 242 -NLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIADEFM 300

Query: 357 EKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGN-RG 415
            K + +     +G+    GV  GP I  +  ++ L YI  G+E  A L C G    +  G
Sbjct: 301 AKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDG 360

Query: 416 YFVQPTVFSDVT 427
           YFV PT+F +VT
Sbjct: 361 YFVGPTIFDNVT 372

>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521

 Score =  280 bits (718), Expect = 3e-89
 Identities = 112/376 (29%), Positives = 176/376 (46%), Gaps = 11/376 (2%)

Query: 58  TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
             + I+G+ V   SG+   +++P T EV   VA     D+  AV +A+ A  +  W    
Sbjct: 27  LGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPK--WAATN 84

Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
           P  R+R+ ++   L+  NM ELA + +  +GK    + K ++   + +  +  G      
Sbjct: 85  PQRRARVFMKFVQLLNDNMNELAEMLSREHGKTIDDA-KGDIVRGLEVCEFVIGIPHLQK 143

Query: 178 GLTVPGDG-NYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
                G G    + ++ +P+G+   I P+NFP ++  W  APA+ CGN  +LK +E+ P 
Sbjct: 144 SEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMIPMWMFAPAIACGNAFILKPSERDPS 203

Query: 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
             + +A+L  EAGLP G+LNVV+G    A  A+ +H D+  +SF G     + V   AA 
Sbjct: 204 VPIRLAELMIEAGLPAGILNVVNG-DKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAM 262

Query: 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRT-YVHERVYDEF 355
            N K      G K+  II  DAD+DQA      A + + G+ C A S    V E   +  
Sbjct: 263 -NGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRL 321

Query: 356 VEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRL---- 411
           ++K         +G       + GP +  E  Q++   I SGIE  A L   G       
Sbjct: 322 IDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQG 381

Query: 412 GNRGYFVQPTVFSDVT 427
              G+F+   +F DVT
Sbjct: 382 YENGHFIGGCLFDDVT 397

>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563

 Score =  268 bits (687), Expect = 3e-84
 Identities = 88/383 (22%), Positives = 157/383 (40%), Gaps = 15/383 (3%)

Query: 61  LINGQFVDAASGKTFPVYDP-RTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPY 119
           ++  + V   +        P   A  +A     D   ++RA+  A  A  E  W      
Sbjct: 67  VVGDEEVW--TSDIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARKE--WDLKPMA 122

Query: 120 ERSRIMLRAADLIE-KNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKI-H 177
           +R+++ L+AAD++      E+ A      GK  +Q+       ++    + A +A ++  
Sbjct: 123 DRAQVFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEG 182

Query: 178 GLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLT 237
              +    + +        G    I P+NF  +      APAL  GN ++ K ++   L 
Sbjct: 183 EQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGGNLAGAPALM-GNVVLWKPSDTAMLA 241

Query: 238 ALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKS 297
           +  V ++  EAGLPP ++  V   GPT G  + S   +  ++FTG   T K +    A++
Sbjct: 242 SYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQN 301

Query: 298 -----NLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVY 352
                    +  E GGK+   +   ADVD  V     + F   GQ C A SR YV + ++
Sbjct: 302 LDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLW 361

Query: 353 DEFVEKAKARAMRRIVGDPFKS-GVEQGPQIDPEQFQKVLRYIRSG-IESNATLECGGDR 410
            +   +      R  VGDP +  G      ID + F ++ +++       + ++  GG  
Sbjct: 362 PQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQC 421

Query: 411 LGNRGYFVQPTVFSDVTVSFISL 433
             + GY+V+P +          +
Sbjct: 422 NESVGYYVEPCIIESKDPQEPIM 444

>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464

 Score =  247 bits (633), Expect = 3e-77
 Identities = 55/338 (16%), Positives = 110/338 (32%), Gaps = 23/338 (6%)

Query: 95  EDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQS 154
           +++   + +A KA  E     M+  +   I+   AD      E+LA +     G    Q 
Sbjct: 12  QEVRNLIESANKAQKE--LAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQD 69

Query: 155 LKSEVPMVVRLLHYYAGWADKIHGLTVP-GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFT 213
              +V   V    +   +   +  + +   D    +  +  P+GV   ++P   P     
Sbjct: 70  ---KVIKNVFASKHVYNYIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVI 126

Query: 214 WKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHE----AGLPPGVLNVVSGYGPTAGAAL 269
           +K   ++  GN+IV           L   ++  E    AG P G ++ ++         L
Sbjct: 127 YKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTVPTIQGTDQL 186

Query: 270 ASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHF 329
             H D   +  TG     K     AA S+  P      G  P  I   A++ +AV+    
Sbjct: 187 MKHKDTAVILATGGSAMVK-----AAYSSGTPAIGVGPGNGPAFIERSANIPRAVKHILD 241

Query: 330 ALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGD--------PFKSGVEQGPQ 381
           +  ++ G  C +     V     +  + + + +    +             +      P 
Sbjct: 242 SKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPA 301

Query: 382 IDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQ 419
           I  +  Q +       + ++A +    +          
Sbjct: 302 IVGKSVQHIANLAGLTVPADARVLIAEETKVGAKIPYS 339

>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469

 Score =  176 bits (448), Expect = 3e-50
 Identities = 98/342 (28%), Positives = 144/342 (42%), Gaps = 27/342 (7%)

Query: 95  EDIDRAVATARKAFDEGPWPKMTPYERSRIMLRA-ADLIEKNMEEL-AALETWNNGKPYV 152
             I  AV  AR AF  G   +  P +     L A   LI++  +EL  AL   +  K   
Sbjct: 18  SKISEAVKRARAAFSSG---RTRPLQFRIQQLEALQRLIQEQEQELVGALAA-DLHKNEW 73

Query: 153 QSLKSEVPMVVRLLHYY----AGWA--DKIH-GLTVPGDGNYHIQTLHEPIGVAGQIVPW 205
            +   EV  V+  + Y       WA  + +        D  Y      EP+GV   I  W
Sbjct: 74  NAYYEEVVYVLEEIEYMIQKLPEWAADEPVEKTPQTQQDELY---IHSEPLGVVLVIGTW 130

Query: 206 NFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTA 265
           N+P  L    +  A+  GN +VLK +E +   A  +A +  +  L   +  V++G G   
Sbjct: 131 NYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQY-LDKDLYPVING-GVPE 188

Query: 266 GAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVE 325
              L      D + +TG    GKI+   AAK +L PVTLELGGKSP  +  + D+D A  
Sbjct: 189 TTELLKE-RFDHILYTGSTGVGKIIMTAAAK-HLTPVTLELGGKSPCYVDKNCDLDVACR 246

Query: 326 LAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPE 385
              +  F N GQ C A         + ++ VEK K ++++   G+  K   + G  I   
Sbjct: 247 RIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLK-KSLKEFYGEDAKKSRDYGRIISAR 305

Query: 386 QFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVT 427
            FQ+V+  I         +  GG       Y   PT+ +DV 
Sbjct: 306 HFQRVMGLI-----EGQKVAYGGTGDAATRYI-APTILTDVD 341

>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457

 Score =  170 bits (432), Expect = 5e-48
 Identities = 90/344 (26%), Positives = 136/344 (39%), Gaps = 29/344 (8%)

Query: 93  DAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRA-ADLIEKNMEEL-AALETWNNGKP 150
               ID   +  +  F              +  L    + +  N E L +AL   + GKP
Sbjct: 26  SPAKIDSLFSAQKAYFATRATA---DVGFRKQSLERLKEAVINNKEALYSALAE-DLGKP 81

Query: 151 YVQSLKSEVPMVVRLLHYY----AGWA--DKIH-GLTVPGDGNYHIQTLHEPIGVAGQIV 203
                 +E+  V+  + +       W     +     +     Y    + EP GV   I 
Sbjct: 82  KDVVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECY---VVQEPYGVTYIIG 138

Query: 204 PWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGP 263
           P+N+P+ L    +  A+  GNT ++K +E TP T+  + K+  EA   P  + V+ G G 
Sbjct: 139 PFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEA-FAPEYVAVIQG-GR 196

Query: 264 TAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQA 323
              + L S    D + FTG  + GK+V + AAK +L PV LELGGK P I+  DAD+DQ 
Sbjct: 197 DENSHLLSL-PFDFIFFTGSPNVGKVVMQAAAK-HLTPVVLELGGKCPLIVLPDADLDQT 254

Query: 324 VELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQID 383
           V    F  F N GQ   A    YVH  V D  +E      +   V          G  + 
Sbjct: 255 VNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLE-----RLVERVKTELPEINSTGKLVT 309

Query: 384 PEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVT 427
             Q Q+++  +     +   +  G          +  TV   V 
Sbjct: 310 ERQVQRLVSLLE---ATQGQVLVGSQA-DVSKRALSATVVDGVE 349

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 54.5 bits (130), Expect = 5e-08
 Identities = 59/426 (13%), Positives = 123/426 (28%), Gaps = 135/426 (31%)

Query: 5   RRISTLLSRSFPSA--------SPSLLRSLGRES-----SRARGISRFSTAAVVEEPIIP 51
           RR+  L S+ + +         +     +          +R + ++ F +AA      + 
Sbjct: 235 RRL--LKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLD 292

Query: 52  PVQISYTKNLINGQFVDAASGKTFPVYD-PRTAE-----VIANVAEGDAEDIDRAVATAR 105
              ++ T + +    +     +     D PR         ++ +AE   + +        
Sbjct: 293 HHSMTLTPDEVKSLLLKYLDCRPQ---DLPREVLTTNPRRLSIIAESIRDGLAT------ 343

Query: 106 KAFDEGPWPKMTPYERSRIM------LRAADLIEKNMEELA-----------ALET-WNN 147
             +D   W  +   + + I+      L  A+   K  + L+            L   W +
Sbjct: 344 --WD--NWKHVNCDKLTTIIESSLNVLEPAEY-RKMFDRLSVFPPSAHIPTILLSLIWFD 398

Query: 148 GKPYVQSLKSEVPMVVRLLHYY---AGWADK----IHGL----TVPGDGNYHIQTLHEPI 196
                     +V +VV  LH Y        +    I  +     V  +  Y    LH  I
Sbjct: 399 VIKS------DVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEY---ALHRSI 449

Query: 197 GVAGQIVPWNFPLLLFTWKVAPALTCG---NTIV--LKSAEQTPLTALYVAKLFHEAGLP 251
                +  +N P    +  + P        + I   LK+ E      L+   +F      
Sbjct: 450 -----VDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLF-RMVF------ 497

Query: 252 PGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE---LAAKSNLKPVTLELGG 308
              L+                       F       KI  +     A  ++     +L  
Sbjct: 498 ---LD---------------------FRFLE----QKIRHDSTAWNASGSILNTLQQLKF 529

Query: 309 KSPFIIFDDADVDQAV-ELAHFALFYNQGQCCCAGSRTYVH-------ERVYDEFVEKAK 360
             P+I  +D   ++ V  +  F     +    C+     +        E +++E      
Sbjct: 530 YKPYICDNDPKYERLVNAILDFLPKIEE-NLICSKYTDLLRIALMAEDEAIFEE-----A 583

Query: 361 ARAMRR 366
            + ++R
Sbjct: 584 HKQVQR 589

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 51.8 bits (123), Expect = 3e-07
 Identities = 61/442 (13%), Positives = 127/442 (28%), Gaps = 139/442 (31%)

Query: 51  PPVQISYTKNLINGQFVDAASGKTFP--------VYDPRTAEVIANVAEGDAEDID-RAV 101
             ++I   +  +          K +         V + +           +A ++  + +
Sbjct: 223 IKLRIHSIQAELRRLLKS----KPYENCLLVLLNVQNAKAW---------NAFNLSCKIL 269

Query: 102 ATARKAFDEGPWPKMTPYERSRIML--RAADLIEKNMEELAALETWNNGKPYVQSLKSEV 159
            T R    +     ++    + I L   +  L    ++ L  L  + + +P  Q L  EV
Sbjct: 270 LTTR---FKQVTDFLSAATTTHISLDHHSMTLTPDEVKSL--LLKYLDCRP--QDLPREV 322

Query: 160 ----PMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWK 215
               P  + ++      A+ I       DG                   W+    +   K
Sbjct: 323 LTTNPRRLSII------AESIR------DGLAT----------------WDNWKHVNCDK 354

Query: 216 VAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGL-------PPGVLNVVSGYGPTAGAA 268
           +        TI+  S     L      K+F    +       P  +L+++      +   
Sbjct: 355 L-------TTIIESSLNV--LEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKS--- 402

Query: 269 LASHMDVDKLSFTGHCDTGKIVQELAAKS----NLKPVTLELGGKSPFIIFD-DADVDQA 323
                           D   +V +L   S      K  T+ +    P I  +    ++  
Sbjct: 403 ----------------DVMVVVNKLHKYSLVEKQPKESTISI----PSIYLELKVKLENE 442

Query: 324 VELAHFAL--FYNQGQCCCAGSRTYVHERVYD-EFVEKAKARAMRRIVGDPFKSGVEQGP 380
             L H ++   YN  +   +      +   Y    +       ++ I         E   
Sbjct: 443 YAL-HRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHI----GHHLKNI---------EHPE 488

Query: 381 QIDPEQFQKV---LRYIRSGIESNATLECGGDRLGN--------RGYFVQPTVFSDVTVS 429
           ++    F+ V    R++   I  ++T       + N        + Y        +  V+
Sbjct: 489 RMT--LFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVN 546

Query: 430 FISLLQFLIPIFSFIILCVVTD 451
             ++L FL  I   +I    TD
Sbjct: 547 --AILDFLPKIEENLICSKYTD 566

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	456
2wme_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	100.0
3ifg_A	484	Succinate-semialdehyde dehydrogenase (NADP+); niai	100.0
3ed6_A	520	Betaine aldehyde dehydrogenase; structural genomic	100.0
3rh9_A	506	Succinate-semialdehyde dehydrogenase (NAD(P)(+));	100.0
2o2p_A	517	Formyltetrahydrofolate dehydrogenase; aldehyde deh	100.0
1bxs_A	501	Aldehyde dehydrogenase; retinal, class 1, tetramer	100.0
3b4w_A	495	Aldehyde dehydrogenase; RV0223C-NAD complex, struc	100.0
3ek1_A	504	Aldehyde dehydrogenase; ssgcid, oxidoreductase, st	100.0
3u4j_A	528	NAD-dependent aldehyde dehydrogenase; PSI-biology,	100.0
4f3x_A	498	Putative aldehyde dehydrogenase; structural genomi	100.0
3iwj_A	503	Putative aminoaldehyde dehydrogenase; rossmann fol	100.0
1o04_A	500	Aldehyde dehydrogenase, mitochondrial precursor; A	100.0
1a4s_A	503	ALDH, betaine aldehyde dehydrogenase; oxidoreducta	100.0
3i44_A	497	Aldehyde dehydrogenase; oxidoreductase, structural	100.0
3k2w_A	497	Betaine-aldehyde dehydrogenase; structural genomic	100.0
3qan_A	538	1-pyrroline-5-carboxylate dehydrogenase 1; proline	100.0
3r31_A	517	BADH, betaine aldehyde dehydrogenase; structural g	100.0
2imp_A	479	Lactaldehyde dehydrogenase; protein-lactate-NADH t	100.0
2d4e_A	515	5-carboxymethyl-2-hydroxymuconate semialdehyde deh	100.0
3jz4_A	481	Succinate-semialdehyde dehydrogenase [NADP+]; tetr	100.0
4e4g_A	521	Methylmalonate-semialdehyde dehydrogenase; structu	100.0
1wnd_A	495	Putative betaine aldehyde dehydrogenase; NADH, flu	100.0
3prl_A	505	NADP-dependent glyceraldehyde-3-phosphate dehydro;	100.0
2ve5_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	100.0
4dng_A	485	Uncharacterized aldehyde dehydrogenase ALDY; struc	100.0
2w8n_A	487	Succinate-semialdehyde dehydrogenase, mitochondria	100.0
2j6l_A	500	Aldehyde dehydrogenase family 7 member A1; NAD, re	100.0
1t90_A	486	MMSDH, probable methylmalonate-semialdehyde dehydr	100.0
3pqa_A	486	Lactaldehyde dehydrogenase; structural genomics, p	100.0
3r64_A	508	NAD dependent benzaldehyde dehydrogenase; structur	100.0
1uzb_A	516	1-pyrroline-5-carboxylate dehydrogenase; oxidoredu	100.0
3ros_A	484	NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-	100.0
3ty7_A	478	Putative aldehyde dehydrogenase SAV2122; structura	100.0
1euh_A	475	NADP dependent non phosphorylating glyceraldehyde-	100.0
1uxt_A	501	Glyceraldehyde-3-phosphate dehydrogenase (NADP+);	100.0
3ju8_A	490	Succinylglutamic semialdehyde dehydrogenase; alpha	100.0
4e3x_A	563	Delta-1-pyrroline-5-carboxylate dehydrogenase, mit	100.0
3etf_A	462	Putative succinate-semialdehyde dehydrogenase; cen	100.0
4f9i_A	1026	Proline dehydrogenase/delta-1-pyrroline-5-carboxy	100.0
4h7n_A	474	Aldehyde dehydrogenase; structural genomics, PSI-b	100.0
2y53_A	534	Aldehyde dehydrogenase (BOX pathway); oxidoreducta	100.0
3lns_A	457	Benzaldehyde dehydrogenase; oxidoreductase, NADP+,	100.0
3v4c_A	528	Aldehyde dehydrogenase (NADP+); structural genomic	100.0
1ez0_A	510	ALDH, aldehyde dehydrogenase; nucleotide binding d	100.0
3sza_A	469	Aldehyde dehydrogenase, dimeric NADP-preferring; A	100.0
3haz_A	1001	Proline dehydrogenase; proline utilization A, PUTA	100.0
3my7_A	452	Alcohol dehydrogenase/acetaldehyde dehydrogenase;	100.0
3k9d_A	464	LMO1179 protein, aldehyde dehydrogenase; structura	100.0
2h5g_A	463	Delta 1-pyrroline-5-carboxylate synthetase; dehydr	100.0
1vlu_A	468	Gamma-glutamyl phosphate reductase; YOR323C, struc	100.0
4ghk_A	444	Gamma-glutamyl phosphate reductase; structural gen	100.0
1o20_A	427	Gamma-glutamyl phosphate reductase; TM0293, struct	100.0
4gic_A	423	HDH, histidinol dehydrogenase; protein structure i	90.58

>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*

Probab=100.00  E-value=2.9e-91  Score=725.75  Aligned_cols=398  Identities=39%  Similarity=0.673  Sum_probs=380.0

Q ss_pred             CccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 012806           56 SYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKN  135 (456)
Q Consensus        56 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~  135 (456)
                      ...++||||+|+++.++++++++||.||+++++++.++.+|+++||++|++||+  .|++++..+|.++|+++++.|+++
T Consensus         5 ~~~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~   82 (490)
T 2wme_A            5 EEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQK--VWAAMTAMQRSRILRRAVDILRER   82 (490)
T ss_dssp             CCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred             CCCcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHh
Confidence            345799999999988999999999999999999999999999999999999999  999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhH
Q 012806          136 MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWK  215 (456)
Q Consensus       136 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~  215 (456)
                      .++|++++++|+|||+.+++..|+..+++.++||+++.+++.+...+...+...++.++|+|||++|+|||||+.+.+++
T Consensus        83 ~~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~  162 (490)
T 2wme_A           83 NDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWK  162 (490)
T ss_dssp             HHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCccccccCCcceeEEecceeEEEEeccccCcchhhhhh
Confidence            99999999999999999998667999999999999999998887777666778899999999999999999999999999


Q ss_pred             HHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHh
Q 012806          216 VAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA  295 (456)
Q Consensus       216 ~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a  295 (456)
                      +++||++||+||+|||+.+|+++..++++++++|+|+|++|+|+|++.++++.|..||+||+|+||||+.+|+.+.+.++
T Consensus       163 ~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~a  242 (490)
T 2wme_A          163 SAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASAS  242 (490)
T ss_dssp             HHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred             HHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999887555


Q ss_pred             hCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCC
Q 012806          296 KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG  375 (456)
Q Consensus       296 ~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~  375 (456)
                      ..++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||+|++
T Consensus       243 ~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~~  322 (490)
T 2wme_A          243 SSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDEN  322 (490)
T ss_dssp             HHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred             ccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCcccc
Confidence            44899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccC----CCCceEecEEEecCCCChHhhhc-cccceEEeEEEcccc
Q 012806          376 VEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG----NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVT  450 (456)
Q Consensus       376 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~----~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~  450 (456)
                      +++||++++.+++++.++|++++++|+++++||++..    .+|+|++||||.+++++|+++.| +||||++|+.|+|.+
T Consensus       323 ~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d  402 (490)
T 2wme_A          323 TNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDED  402 (490)
T ss_dssp             CCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHH
T ss_pred             CccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCCHH
Confidence            9999999999999999999999999999999998643    36999999999999999977775 999999999999999


Q ss_pred             ccccc
Q 012806          451 DCTSI  455 (456)
Q Consensus       451 eai~~  455 (456)
                      |||++
T Consensus       403 eAi~~  407 (490)
T 2wme_A          403 EAIRR  407 (490)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99975

>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q

Probab=100.00  E-value=1.2e-87  Score=699.14  Aligned_cols=395  Identities=36%  Similarity=0.568  Sum_probs=377.6

Q ss_pred             ccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 012806           57 YTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM  136 (456)
Q Consensus        57 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~  136 (456)
                      ..++||||+|+++.++++++++||.||+++++++.++.+|+++|+++|++||+  .|+.++..+|.++|+++++.|+++.
T Consensus        12 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~   89 (484)
T 3ifg_A           12 RHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWA--GWRMKTAKERAAILRRWFDLVIANS   89 (484)
T ss_dssp             CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHTH
T ss_pred             ccceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence            45789999999877889999999999999999999999999999999999999  8999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCC-CCcceEEEeeccceEEEEccCCchHHHHHhH
Q 012806          137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWK  215 (456)
Q Consensus       137 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~  215 (456)
                      ++|++++++|+|||..+++ .|+..+++.++||+.+.++..+...+.. .+...++.++|+|||++|+|||||+.+.+++
T Consensus        90 ~ela~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~  168 (484)
T 3ifg_A           90 DDLALILTTEQGKPLAEAK-GEIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARK  168 (484)
T ss_dssp             HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHH
T ss_pred             HHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEECCCcChHHHHHHH
Confidence            9999999999999999998 6999999999999999888776655533 4567889999999999999999999999999


Q ss_pred             HHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHh
Q 012806          216 VAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA  295 (456)
Q Consensus       216 ~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a  295 (456)
                      +++||++||+||+|||+.+|+++..++++++++|+|+|++|+|+|++.++++.|..||+||+|+||||+.+|+.|++.++
T Consensus       169 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa  248 (484)
T 3ifg_A          169 VGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSA  248 (484)
T ss_dssp             HHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTG
T ss_pred             HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhh
Confidence            99999999999999999999999999999999999999999999988899999999999999999999999999999998


Q ss_pred             hCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCC
Q 012806          296 KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG  375 (456)
Q Consensus       296 ~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~  375 (456)
                      + ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|++
T Consensus       249 ~-~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~  327 (484)
T 3ifg_A          249 P-TVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESG  327 (484)
T ss_dssp             G-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred             c-cCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence            7 899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEcccccccc
Q 012806          376 VEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTS  454 (456)
Q Consensus       376 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~  454 (456)
                      +++||++++.+++++.++|++++++|+++++||.+...+|+|++|||+.+++++|+.+.+ +||||++|+.++|.+|+|+
T Consensus       328 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~  407 (484)
T 3ifg_A          328 ATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVR  407 (484)
T ss_dssp             CCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHH
T ss_pred             CCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHHHH
Confidence            999999999999999999999999999999999875557999999999999999977775 9999999999999999997


Q ss_pred             c
Q 012806          455 I  455 (456)
Q Consensus       455 ~  455 (456)
                      +
T Consensus       408 ~  408 (484)
T 3ifg_A          408 L  408 (484)
T ss_dssp             H
T ss_pred             H
Confidence            5

>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*

Probab=100.00  E-value=1e-86  Score=696.92  Aligned_cols=395  Identities=35%  Similarity=0.610  Sum_probs=377.3

Q ss_pred             ccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhc--ccCCCCCCCHHHHHHHHHHHHHHHHH
Q 012806           57 YTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAF--DEGPWPKMTPYERSRIMLRAADLIEK  134 (456)
Q Consensus        57 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~--~~~~w~~~~~~~R~~iL~~~a~~l~~  134 (456)
                      ..++||||+|+.+.++++++++||.||+++++++.++.+|+++|+++|++||  +  .|+.++..+|.++|+++++.|++
T Consensus        32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~--~w~~~~~~~R~~~L~~~a~~l~~  109 (520)
T 3ed6_A           32 SQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESG--EWSQETAETRGKKVRAIADKIKE  109 (520)
T ss_dssp             CCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHT--TTTTSCHHHHHHHHHHHHHHHHH
T ss_pred             CCceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcccc--ccccCCHHHHHHHHHHHHHHHHH
Confidence            3478999999988788999999999999999999999999999999999999  7  89999999999999999999999


Q ss_pred             hHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCC-CCcceEEEeeccceEEEEccCCchHHHHH
Q 012806          135 NMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFT  213 (456)
Q Consensus       135 ~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~  213 (456)
                      +.++|++++++|+|||..+++ .|+..+++.++||+++++++.+...+.. .+...++.++|+|||++|+|||||+.+.+
T Consensus       110 ~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~  188 (520)
T 3ed6_A          110 HREALARLETLDTGKTLEESY-ADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQAS  188 (520)
T ss_dssp             THHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred             hHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCeecccCCCCCcccccccCccEEEEECCCccHHHHHH
Confidence            999999999999999999998 5999999999999999988777665543 45678899999999999999999999999


Q ss_pred             hHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHH
Q 012806          214 WKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQEL  293 (456)
Q Consensus       214 ~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~  293 (456)
                      +++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|..||+||+|+||||+.+|+.|++.
T Consensus       189 ~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~~  268 (520)
T 3ed6_A          189 WKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKN  268 (520)
T ss_dssp             HHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHHH
T ss_pred             HHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999888999999999999999999999999999999


Q ss_pred             HhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCC
Q 012806          294 AAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFK  373 (456)
Q Consensus       294 ~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~  373 (456)
                      +++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|
T Consensus       269 aa~-~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d  347 (520)
T 3ed6_A          269 AAN-NVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFD  347 (520)
T ss_dssp             HHT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTTS
T ss_pred             hhh-cCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCCcc
Confidence            988 8999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccC----CCCceEecEEEecCCCChHhhhc-cccceEEeEEEcc
Q 012806          374 SGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG----NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCV  448 (456)
Q Consensus       374 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~----~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~  448 (456)
                      +++++||++++++++++.++|++++++|+++++||.+..    .+|+|++||||.+++++|+++.+ +||||++|+.+++
T Consensus       348 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~  427 (520)
T 3ed6_A          348 ADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFET  427 (520)
T ss_dssp             TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred             CCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCC
Confidence            999999999999999999999999999999999998642    47999999999999999987775 9999999999999


Q ss_pred             ccccccc
Q 012806          449 VTDCTSI  455 (456)
Q Consensus       449 ~~eai~~  455 (456)
                      .+|||++
T Consensus       428 ~deAi~~  434 (520)
T 3ed6_A          428 EQEAIQL  434 (520)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999975

>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}

Probab=100.00  E-value=1.6e-86  Score=693.15  Aligned_cols=396  Identities=32%  Similarity=0.526  Sum_probs=378.9

Q ss_pred             CccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 012806           56 SYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKN  135 (456)
Q Consensus        56 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~  135 (456)
                      ...++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|+++
T Consensus        10 ~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~   87 (506)
T 3rh9_A           10 ENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALR--LTNPWPIETRRKWLEDIRDGLKEN   87 (506)
T ss_dssp             SCCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCC--SSSCCCHHHHHHHHHHHHHHHHHT
T ss_pred             cccCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHh
Confidence            445799999999887889999999999999999999999999999999999999  999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEe-eccceEEEEccCCchHHHHHh
Q 012806          136 MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLH-EPIGVAGQIVPWNFPLLLFTW  214 (456)
Q Consensus       136 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~Gvv~~i~p~N~P~~~~~~  214 (456)
                      .++|++++++|+|||..+++ .|+..+++.++||++.+++..+...+...+...++.+ +|+|||++|+|||||+.+.++
T Consensus        88 ~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~  166 (506)
T 3rh9_A           88 REEIGRILCMEHGKPWKEAQ-GEVDYAAGFFDYCAKHISALDSHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIAK  166 (506)
T ss_dssp             HHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGGCCEECSCCGGGCEEEEEEEECCSEEEECCSSSTTHHHHH
T ss_pred             HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCceeeEeecccceEEEEECCCchHHHHHHH
Confidence            99999999999999999998 7999999999999999998877766544456678889 999999999999999999999


Q ss_pred             HHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHH
Q 012806          215 KVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA  294 (456)
Q Consensus       215 ~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~  294 (456)
                      ++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+.++.|+.|++||+|+||||+.+|+.|++.+
T Consensus       167 ~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~a  246 (506)
T 3rh9_A          167 KLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDT  246 (506)
T ss_dssp             HHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHT
T ss_pred             HHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999998889999999999999999999999999999999


Q ss_pred             hhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCC
Q 012806          295 AKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKS  374 (456)
Q Consensus       295 a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~  374 (456)
                      ++ ++||+++|+|||+|+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|+
T Consensus       247 a~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~  325 (506)
T 3rh9_A          247 AE-QVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMND  325 (506)
T ss_dssp             TT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTST
T ss_pred             hh-cCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCccc
Confidence            88 89999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCC-CCceEecEEEecCCCChHhhhc-cccceEEeEEEcccccc
Q 012806          375 GVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGN-RGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDC  452 (456)
Q Consensus       375 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~-~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~ea  452 (456)
                      ++++||++++++++++.++|++++++|+++++||...+. .|+|++|||+.+++++|+.+.+ +||||++|+.++|.+||
T Consensus       326 ~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA  405 (506)
T 3rh9_A          326 GIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEV  405 (506)
T ss_dssp             TCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHH
T ss_pred             CCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHHHH
Confidence            999999999999999999999999999999999986443 7999999999999999977775 99999999999999999


Q ss_pred             ccc
Q 012806          453 TSI  455 (456)
Q Consensus       453 i~~  455 (456)
                      |++
T Consensus       406 i~~  408 (506)
T 3rh9_A          406 IDA  408 (506)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            975

>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*

Probab=100.00  E-value=1.1e-86  Score=696.28  Aligned_cols=396  Identities=39%  Similarity=0.735  Sum_probs=375.1

Q ss_pred             CceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 012806           59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEE  138 (456)
Q Consensus        59 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~  138 (456)
                      ++||||+|+.+.++++++++||.||+++++++.++.+|+++|+++|++||++|.|+.++..+|.++|+++++.|+++.++
T Consensus        38 ~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~e  117 (517)
T 2o2p_A           38 QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEE  117 (517)
T ss_dssp             SEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred             CeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHHH
Confidence            68999999976667899999999999999999999999999999999999866699999999999999999999999999


Q ss_pred             HHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCC----CCCcceEEEeeccceEEEEccCCchHHHHHh
Q 012806          139 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG----DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTW  214 (456)
Q Consensus       139 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~  214 (456)
                      |++++++|+|||+.+++..|+..+++.++||+++++++.+...+.    .++...++.++|+|||++|+|||||+.+.++
T Consensus       118 la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~  197 (517)
T 2o2p_A          118 LATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSW  197 (517)
T ss_dssp             HHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred             HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcchHHHHHH
Confidence            999999999999999874699999999999999998877765543    2333578999999999999999999999999


Q ss_pred             HHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHH
Q 012806          215 KVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA  294 (456)
Q Consensus       215 ~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~  294 (456)
                      ++++||++||+||+|||+.+|+++..++++++++|+|+|++|+|+|.+.+.++.|..|++||+|+||||+.+|+.|++.+
T Consensus       198 ~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~a  277 (517)
T 2o2p_A          198 KTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC  277 (517)
T ss_dssp             HHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred             HHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999998888999999999999999999999999999999


Q ss_pred             h-hCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCC
Q 012806          295 A-KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFK  373 (456)
Q Consensus       295 a-~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~  373 (456)
                      + + ++||+++|+|||+|+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|
T Consensus       278 a~~-~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGdp~~  356 (517)
T 2o2p_A          278 ALS-NVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLE  356 (517)
T ss_dssp             HHH-TCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTTS
T ss_pred             HHh-cCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence            8 7 8999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEcc--cc
Q 012806          374 SGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCV--VT  450 (456)
Q Consensus       374 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~--~~  450 (456)
                      +++++||++++++++++.++|++++++|+++++||......|+|++||||.+++++|+++.+ +||||++|+.|++  .+
T Consensus       357 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~~d  436 (517)
T 2o2p_A          357 RDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVD  436 (517)
T ss_dssp             TTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECTTCSH
T ss_pred             CCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCCCCHH
Confidence            99999999999999999999999999999999999864446999999999999999977775 9999999999999  99


Q ss_pred             ccccc
Q 012806          451 DCTSI  455 (456)
Q Consensus       451 eai~~  455 (456)
                      |||++
T Consensus       437 eAi~~  441 (517)
T 2o2p_A          437 AVLSR  441 (517)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99875

>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*

Probab=100.00  E-value=5e-86  Score=689.32  Aligned_cols=397  Identities=53%  Similarity=0.932  Sum_probs=376.1

Q ss_pred             cCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccC-CCCCCCHHHHHHHHHHHHHHHHHhH
Q 012806           58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNM  136 (456)
Q Consensus        58 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~-~w~~~~~~~R~~iL~~~a~~l~~~~  136 (456)
                      .++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||++| .|+.++..+|.++|+++++.|+++.
T Consensus        21 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~  100 (501)
T 1bxs_A           21 TKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDR  100 (501)
T ss_dssp             CSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred             cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHHH
Confidence            368999999987678899999999999999999999999999999999999743 6999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHH
Q 012806          137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKV  216 (456)
Q Consensus       137 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~  216 (456)
                      ++|++++++|+|||..++...|+..+++.++||++.++++.+...+...+...++.++|+|||++|+|||||+.+.++++
T Consensus       101 ~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~  180 (501)
T 1bxs_A          101 LLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKI  180 (501)
T ss_dssp             HHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeeccCCcceeEEecCCceEEEECCCcchHHHHHHHH
Confidence            99999999999999998765799999999999999998887765554445567899999999999999999999999999


Q ss_pred             HHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHh-
Q 012806          217 APALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA-  295 (456)
Q Consensus       217 ~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a-  295 (456)
                      ++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+.++.|..|++||+|+||||+.+|+.|++.++ 
T Consensus       181 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~  260 (501)
T 1bxs_A          181 GPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGK  260 (501)
T ss_dssp             HHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHHH
T ss_pred             HHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhh
Confidence            9999999999999999999999999999999999999999999988889999999999999999999999999999998 


Q ss_pred             hCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCC
Q 012806          296 KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG  375 (456)
Q Consensus       296 ~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~  375 (456)
                      + ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|++
T Consensus       261 ~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~  339 (501)
T 1bxs_A          261 S-NLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPG  339 (501)
T ss_dssp             T-TCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTT
T ss_pred             c-cCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCCcccC
Confidence            6 899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEcccccccc
Q 012806          376 VEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTS  454 (456)
Q Consensus       376 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~  454 (456)
                      +++||++++++++++.++|++++++|+++++||......|+|++||||.+++++|+.+.+ +||||++|+.|+|.+|+|+
T Consensus       340 ~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~  419 (501)
T 1bxs_A          340 VSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIK  419 (501)
T ss_dssp             CCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHH
T ss_pred             CccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHH
Confidence            999999999999999999999999999999999764446999999999999999977775 9999999999999999997


Q ss_pred             c
Q 012806          455 I  455 (456)
Q Consensus       455 ~  455 (456)
                      +
T Consensus       420 ~  420 (501)
T 1bxs_A          420 R  420 (501)
T ss_dssp             H
T ss_pred             H
Confidence            5

>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=6.2e-86  Score=688.18  Aligned_cols=396  Identities=38%  Similarity=0.584  Sum_probs=375.4

Q ss_pred             cCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 012806           58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME  137 (456)
Q Consensus        58 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~  137 (456)
                      .++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+.|.|+.++..+|.++|+++++.|+++.+
T Consensus         9 ~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~   88 (495)
T 3b4w_A            9 DKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERKD   88 (495)
T ss_dssp             SSEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred             cceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHHHH
Confidence            46899999997767889999999999999999999999999999999999986679999999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHH
Q 012806          138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVA  217 (456)
Q Consensus       138 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~  217 (456)
                      +|++++++|+|||..+++..|+..+++.++||+++++++.+...+.+.+...++.++|+|||++|+|||||+.+.+++++
T Consensus        89 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~  168 (495)
T 3b4w_A           89 LFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIA  168 (495)
T ss_dssp             HHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCceEEEEEccCceEEEECCCcchHHHHHHHHH
Confidence            99999999999999998646999999999999999988877655433444678999999999999999999999999999


Q ss_pred             HHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhC
Q 012806          218 PALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKS  297 (456)
Q Consensus       218 ~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~  297 (456)
                      +||++||+||+|||+.+|+++..++++++++|+|+|++|+|+| +.+.++.|+.|++||+|+||||+.+|+.|.+.+++ 
T Consensus       169 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~-  246 (495)
T 3b4w_A          169 PALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAE-  246 (495)
T ss_dssp             HHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCB-SHHHHHHHTTCTTCCEEEEESCHHHHHHHHHHHHH-
T ss_pred             HHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhh-
Confidence            9999999999999999999999999999999999999999999 88899999999999999999999999999999998 


Q ss_pred             CCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCc
Q 012806          298 NLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVE  377 (456)
Q Consensus       298 ~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~  377 (456)
                      ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|++++
T Consensus       247 ~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~  326 (495)
T 3b4w_A          247 MLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQ  326 (495)
T ss_dssp             TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTCTTCC
T ss_pred             cCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCccCCCc
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccC--CCCceEecEEEecCCCChHhhhc-cccceEEeEEEcccccccc
Q 012806          378 QGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG--NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTS  454 (456)
Q Consensus       378 ~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~--~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~  454 (456)
                      +||++++++++++.++|++++++|+++++||+...  ..|+|++||||.+++++|+.+.+ +||||++|+.+++.+|||+
T Consensus       327 ~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~  406 (495)
T 3b4w_A          327 IGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIA  406 (495)
T ss_dssp             BCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHH
T ss_pred             cCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCHHHHHH
Confidence            99999999999999999999999999999997643  36999999999999999977775 9999999999999999997


Q ss_pred             c
Q 012806          455 I  455 (456)
Q Consensus       455 ~  455 (456)
                      +
T Consensus       407 ~  407 (495)
T 3b4w_A          407 I  407 (495)
T ss_dssp             H
T ss_pred             H
Confidence            5

>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}

Probab=100.00  E-value=1.9e-86  Score=692.40  Aligned_cols=393  Identities=35%  Similarity=0.595  Sum_probs=375.6

Q ss_pred             ccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 012806           57 YTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM  136 (456)
Q Consensus        57 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~  136 (456)
                      ..++||||+|+++.++++++++||.||+++++++.++.+|+++|+++|++||+  .|+.++..+|.++|+++++.|+++.
T Consensus        32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~  109 (504)
T 3ek1_A           32 KSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALS--GWAAKTAKERAGILRKWFDLIIANA  109 (504)
T ss_dssp             CSSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred             ccCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHHH
Confidence            34789999999887889999999999999999999999999999999999999  8999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCC-CCcceEEEeeccceEEEEccCCchHHHHHhH
Q 012806          137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWK  215 (456)
Q Consensus       137 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~  215 (456)
                      ++|++++++|+|||..+++ .|+..+++.++||+.+.++..+...+.. .+...++.++|+|||++|+|||||+.+.+++
T Consensus       110 ~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~  188 (504)
T 3ek1_A          110 DDIALIMTSEQGKPLAEAR-GEVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRK  188 (504)
T ss_dssp             HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHH
T ss_pred             HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEECCCcchHHHHHHH
Confidence            9999999999999999998 5999999999999999988776655433 3466889999999999999999999999999


Q ss_pred             HHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHh
Q 012806          216 VAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA  295 (456)
Q Consensus       216 ~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a  295 (456)
                      +++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|..||+||+|+||||+.+|+.|.+.++
T Consensus       189 ~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa  268 (504)
T 3ek1_A          189 AAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCA  268 (504)
T ss_dssp             HHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHG
T ss_pred             HHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhh
Confidence            99999999999999999999999999999999999999999999988899999999999999999999999999999998


Q ss_pred             hCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCC
Q 012806          296 KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG  375 (456)
Q Consensus       296 ~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~  375 (456)
                      + ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|++
T Consensus       269 ~-~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~  347 (504)
T 3ek1_A          269 P-TIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPG  347 (504)
T ss_dssp             G-GTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred             h-hcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCcccc
Confidence            8 899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEcccccccc
Q 012806          376 VEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTS  454 (456)
Q Consensus       376 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~  454 (456)
                      +++||++++++++++.++|++++++|+++++||.+  .+|+|++|||+.+++++|+++.+ +||||++|+.|+|.||||+
T Consensus       348 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~--~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~  425 (504)
T 3ek1_A          348 VVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE--LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIA  425 (504)
T ss_dssp             CCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE--EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHH
T ss_pred             CccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc--CCCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHHH
Confidence            99999999999999999999999999999999976  36899999999999999977775 9999999999999999997


Q ss_pred             c
Q 012806          455 I  455 (456)
Q Consensus       455 ~  455 (456)
                      +
T Consensus       426 ~  426 (504)
T 3ek1_A          426 Q  426 (504)
T ss_dssp             H
T ss_pred             H
Confidence            5

>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=8.2e-86  Score=691.22  Aligned_cols=397  Identities=40%  Similarity=0.651  Sum_probs=378.0

Q ss_pred             ccCceeCCEEeeCCCCCeeeeecCCC-CceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 012806           57 YTKNLINGQFVDAASGKTFPVYDPRT-AEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKN  135 (456)
Q Consensus        57 ~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~  135 (456)
                      ..++||||+|+++.++++++++||.| |+++++++.++.+|+++++++|++||+++.|+.++..+|.++|+++++.|+++
T Consensus        22 ~~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~  101 (528)
T 3u4j_A           22 RYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILAR  101 (528)
T ss_dssp             BCCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTSSGGGSCHHHHHHHHHHHHHHHHHT
T ss_pred             ccceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHH
Confidence            35799999999887889999999999 99999999999999999999999999322899999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCC-CCcceEEEeeccceEEEEccCCchHHHHHh
Q 012806          136 MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTW  214 (456)
Q Consensus       136 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~  214 (456)
                      .++|++++++|+|||..++. .|+..+++.++||++++++..+...+.. .+...++.++|+|||++|+|||||+.+.++
T Consensus       102 ~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~  180 (528)
T 3u4j_A          102 QEELALIESLEVGKPIAQAR-GEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASE  180 (528)
T ss_dssp             HHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEECCCccHHHHHHH
Confidence            99999999999999999995 7999999999999999988877666554 456789999999999999999999999999


Q ss_pred             HHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHH
Q 012806          215 KVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA  294 (456)
Q Consensus       215 ~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~  294 (456)
                      ++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+.++.|+.|++||+|+||||+.+|+.|++.+
T Consensus       181 ~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~a  260 (528)
T 3u4j_A          181 RVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIA  260 (528)
T ss_dssp             HHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred             HHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999998888999999999999999999999999999999


Q ss_pred             hhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCC
Q 012806          295 AKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKS  374 (456)
Q Consensus       295 a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~  374 (456)
                      ++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+++
T Consensus       261 a~-~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~  339 (528)
T 3u4j_A          261 AR-TVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNE  339 (528)
T ss_dssp             HT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECTTST
T ss_pred             Hh-cCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCCCCc
Confidence            88 89999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCC-CCceEecEEEecCCCChHhhhc-cccceEEeEEEcccccc
Q 012806          375 GVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGN-RGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDC  452 (456)
Q Consensus       375 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~-~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~ea  452 (456)
                      ++++||++++++++++.++|++++++|+++++||.+... +|+|++|||+.+++++|+.+.| +||||++|+.+++.+||
T Consensus       340 ~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA  419 (528)
T 3u4j_A          340 RTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEA  419 (528)
T ss_dssp             TCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHH
T ss_pred             CCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCCHHHH
Confidence            999999999999999999999999999999999987544 7999999999999999987776 99999999999999999


Q ss_pred             ccc
Q 012806          453 TSI  455 (456)
Q Consensus       453 i~~  455 (456)
                      |++
T Consensus       420 i~~  422 (528)
T 3u4j_A          420 VAL  422 (528)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            975

>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*

Probab=100.00  E-value=5.1e-86  Score=688.74  Aligned_cols=396  Identities=35%  Similarity=0.561  Sum_probs=375.8

Q ss_pred             CCccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 012806           55 ISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK  134 (456)
Q Consensus        55 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~  134 (456)
                      +...++||||+|+.+.++ +++++||.||+++++++.++.+|+++|+++|++||+  .|+.++..+|.++|+++++.|++
T Consensus        23 ~~~~~~~I~G~~~~~~~~-~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~   99 (498)
T 4f3x_A           23 MMDTQLLIGSRFEAGTEA-EEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFV--GWSQTTPAERSNALLKIADAIEK   99 (498)
T ss_dssp             CCCCCEEETTEEECCCSC-EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHH
T ss_pred             ccccCeeECCEEeeCCCC-eEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence            344579999999987666 999999999999999999999999999999999999  89999999999999999999999


Q ss_pred             hHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCC-CCCcceEEEeeccceEEEEccCCchHHHHH
Q 012806          135 NMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFT  213 (456)
Q Consensus       135 ~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~  213 (456)
                      +.++|++++++|+|||..++...|+..+++.++||+++++++.+...+. ..+...++.++|+|||++|+|||||+.+.+
T Consensus       100 ~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~  179 (498)
T 4f3x_A          100 EADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMA  179 (498)
T ss_dssp             THHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred             hHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEECCCchHHHHHH
Confidence            9999999999999999999933799999999999999998876665432 235678899999999999999999999999


Q ss_pred             hHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHH
Q 012806          214 WKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQEL  293 (456)
Q Consensus       214 ~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~  293 (456)
                      +++++||++||+||+|||+.+|+++..+++++.++ +|+|++|+|+|++.+.++.|+.||+||+|+||||+.+|+.|.+.
T Consensus       180 ~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~  258 (498)
T 4f3x_A          180 WKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAA  258 (498)
T ss_dssp             HHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHH
T ss_pred             HHHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence            99999999999999999999999999999999999 99999999999888899999999999999999999999999999


Q ss_pred             HhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCC
Q 012806          294 AAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFK  373 (456)
Q Consensus       294 ~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~  373 (456)
                      +++ ++||+++|+|||+|+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|
T Consensus       259 aa~-~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d  337 (498)
T 4f3x_A          259 AAK-TVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDD  337 (498)
T ss_dssp             HHT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCSSG
T ss_pred             HHh-hCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCCcc
Confidence            998 8999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCccCCCCCHHHHHHHHHHHHHHHHcCC-eEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccc
Q 012806          374 SGVEQGPQIDPEQFQKVLRYIRSGIESNA-TLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTD  451 (456)
Q Consensus       374 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga-~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~e  451 (456)
                      +++++||++++.+++++.++|++++++|+ ++++||...+.+|+|++|||+.+++++|+++.+ +||||++|+.+++.+|
T Consensus       338 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de  417 (498)
T 4f3x_A          338 TENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDD  417 (498)
T ss_dssp             GGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTTSC
T ss_pred             ccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCHHH
Confidence            99999999999999999999999999999 999999875568999999999999999977775 9999999999999999


Q ss_pred             cccc
Q 012806          452 CTSI  455 (456)
Q Consensus       452 ai~~  455 (456)
                      ||++
T Consensus       418 Ai~~  421 (498)
T 4f3x_A          418 AVAW  421 (498)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9975

>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*

Probab=100.00  E-value=1.3e-85  Score=687.42  Aligned_cols=397  Identities=36%  Similarity=0.664  Sum_probs=376.1

Q ss_pred             ccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccC---CCCCCCHHHHHHHHHHHHHHHH
Q 012806           57 YTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG---PWPKMTPYERSRIMLRAADLIE  133 (456)
Q Consensus        57 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~---~w~~~~~~~R~~iL~~~a~~l~  133 (456)
                      ..++||||+|+++.++++++++||.||+++++++.++.+|+++++++|++||++|   .|+.++..+|.++|+++++.|+
T Consensus         7 ~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~l~   86 (503)
T 3iwj_A            7 TRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAKVT   86 (503)
T ss_dssp             CCCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHHHH
T ss_pred             CCceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHHHH
Confidence            4578999999988788999999999999999999999999999999999999743   7999999999999999999999


Q ss_pred             HhHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCccc-C--C-CCCcceEEEeeccceEEEEccCCchH
Q 012806          134 KNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTV-P--G-DGNYHIQTLHEPIGVAGQIVPWNFPL  209 (456)
Q Consensus       134 ~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~-~--~-~~~~~~~~~~~P~Gvv~~i~p~N~P~  209 (456)
                      ++.++|++++++|+|||..+++ .|+..+++.++||+++++++.+... +  . ..+...++.++|+|||++|+|||||+
T Consensus        87 ~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~  165 (503)
T 3iwj_A           87 EKKPELAKLESIDCGKPLDEAA-WDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPM  165 (503)
T ss_dssp             HTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSSHH
T ss_pred             HHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCchHH
Confidence            9999999999999999999997 6999999999999999988765441 1  1 23557889999999999999999999


Q ss_pred             HHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHH
Q 012806          210 LLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKI  289 (456)
Q Consensus       210 ~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~  289 (456)
                      .+.++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+.++.|..|+++|+|+||||+.+|+.
T Consensus       166 ~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~  245 (503)
T 3iwj_A          166 LMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSK  245 (503)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHHHH
T ss_pred             HHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHHHH
Confidence            99999999999999999999999999999999999999999999999999988889999999999999999999999999


Q ss_pred             HHHHHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcC
Q 012806          290 VQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVG  369 (456)
Q Consensus       290 i~~~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g  369 (456)
                      |++.+++ ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus       246 i~~~aa~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g  324 (503)
T 3iwj_A          246 IMTAAAQ-LVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIKIS  324 (503)
T ss_dssp             HHHHHGG-GTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCCBS
T ss_pred             HHHHHhc-CCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhccCC
Confidence            9999988 899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccC--CCCceEecEEEecCCCChHhhhc-cccceEEeEEE
Q 012806          370 DPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG--NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIIL  446 (456)
Q Consensus       370 ~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~--~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~  446 (456)
                      ||+++++++||++++++++++.++|++++++|+++++||...+  .+|+|++|||+.+++++|+++.+ +||||++|+.|
T Consensus       325 ~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~  404 (503)
T 3iwj_A          325 DPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTF  404 (503)
T ss_dssp             CTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred             CCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEEEe
Confidence            9999999999999999999999999999999999999998644  57999999999999999977775 99999999999


Q ss_pred             ccccccccc
Q 012806          447 CVVTDCTSI  455 (456)
Q Consensus       447 ~~~~eai~~  455 (456)
                      ++.+|||++
T Consensus       405 ~~~deAi~~  413 (503)
T 3iwj_A          405 STEEEAIDL  413 (503)
T ss_dssp             SSHHHHHHH
T ss_pred             CCHHHHHHH
Confidence            999999875

>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...

Probab=100.00  E-value=5.5e-86  Score=688.80  Aligned_cols=396  Identities=57%  Similarity=0.964  Sum_probs=374.9

Q ss_pred             CceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccC-CCCCCCHHHHHHHHHHHHHHHHHhHH
Q 012806           59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNME  137 (456)
Q Consensus        59 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~-~w~~~~~~~R~~iL~~~a~~l~~~~~  137 (456)
                      ++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||++| .|+.++..+|.++|+++++.|+++.+
T Consensus        21 ~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~  100 (500)
T 1o04_A           21 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRT  100 (500)
T ss_dssp             SEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred             CeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence            58999999987678899999999999999999999999999999999999732 59999999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHH
Q 012806          138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVA  217 (456)
Q Consensus       138 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~  217 (456)
                      +|++++++|+|||..++...|+..+++.++||++++++..+...+...+...++.++|+|||++|+|||||+.+.+++++
T Consensus       101 ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a  180 (500)
T 1o04_A          101 YLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLG  180 (500)
T ss_dssp             HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceecCCCceEEEEEecCCcEEEECCCCchHHHHHHHHH
Confidence            99999999999999987657999999999999999888776655444455678999999999999999999999999999


Q ss_pred             HHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHh-h
Q 012806          218 PALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA-K  296 (456)
Q Consensus       218 ~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a-~  296 (456)
                      +||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.+.+..|..|++||+|+||||+.+|+.|++.++ +
T Consensus       181 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~  260 (500)
T 1o04_A          181 PALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSS  260 (500)
T ss_dssp             HHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHT
T ss_pred             HHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhh
Confidence            999999999999999999999999999999999999999999988889999999999999999999999999999998 6


Q ss_pred             CCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCC
Q 012806          297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGV  376 (456)
Q Consensus       297 ~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~  376 (456)
                       ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|+++
T Consensus       261 -~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~  339 (500)
T 1o04_A          261 -NLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKT  339 (500)
T ss_dssp             -TCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTC
T ss_pred             -cCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCcccccC
Confidence             8999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          377 EQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       377 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      ++||++++++++++.++|++++++|+++++||......|+|++||||.+++++|+.+.+ +||||++|+.|++.+|||++
T Consensus       340 ~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~  419 (500)
T 1o04_A          340 EQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGR  419 (500)
T ss_dssp             SBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHH
T ss_pred             ccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCHHHHHHH
Confidence            99999999999999999999999999999999764346999999999999999977775 99999999999999999975

>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*

Probab=100.00  E-value=1.8e-85  Score=686.01  Aligned_cols=394  Identities=37%  Similarity=0.659  Sum_probs=373.2

Q ss_pred             ccCceeCCEEeeCCCCCe-eeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 012806           57 YTKNLINGQFVDAASGKT-FPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKN  135 (456)
Q Consensus        57 ~~~~~I~G~~~~~~~~~~-~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~  135 (456)
                      ..++||||+|+.+.++++ ++++||.||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|+++
T Consensus        19 ~~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~   96 (503)
T 1a4s_A           19 DDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYL--KWSKMAGIERSRVMLEAARIIRER   96 (503)
T ss_dssp             SCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred             ccceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHHH
Confidence            356899999997767788 99999999999999999999999999999999999  899999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhH
Q 012806          136 MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWK  215 (456)
Q Consensus       136 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~  215 (456)
                      .++|++++++|+|||..+++ .|+..+++.++||++++++..+...+...+...++.++|+|||++|+|||||+.+.+++
T Consensus        97 ~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~  175 (503)
T 1a4s_A           97 RDNIAKLEVINNGKTITEAE-YDIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWK  175 (503)
T ss_dssp             HHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccCCCCceeEEEEecCceEEEECCCcchHHHHHHH
Confidence            99999999999999999997 69999999999999999887665544333446788999999999999999999999999


Q ss_pred             HHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHh
Q 012806          216 VAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA  295 (456)
Q Consensus       216 ~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a  295 (456)
                      +++||++||+||+|||+.+|+++..++++++++|+|+|++|+|+|++ ++++.|..|++||+|+||||+.+|+.|++.++
T Consensus       176 ~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa  254 (503)
T 1a4s_A          176 CAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSA  254 (503)
T ss_dssp             HHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred             HHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhh
Confidence            99999999999999999999999999999999999999999999987 89999999999999999999999999999999


Q ss_pred             hCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCC
Q 012806          296 KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG  375 (456)
Q Consensus       296 ~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~  375 (456)
                      + ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|++
T Consensus       255 ~-~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~  333 (503)
T 1a4s_A          255 K-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTE  333 (503)
T ss_dssp             T-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred             h-cCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCcccC
Confidence            8 899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCccc--C----CCCceEecEEEecCCCChHhhhc-cccceEEeEEEcc
Q 012806          376 VEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRL--G----NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCV  448 (456)
Q Consensus       376 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~--~----~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~  448 (456)
                      +++||++++++++++.++|++++++|+++++||+..  .    ..|+|++||||.+++++|+.+.+ +||||++|+.+++
T Consensus       334 ~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~  413 (503)
T 1a4s_A          334 TRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDT  413 (503)
T ss_dssp             CCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECC
T ss_pred             CccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEecCC
Confidence            999999999999999999999999999999999764  2    36999999999999999977775 9999999999999


Q ss_pred             ccccccc
Q 012806          449 VTDCTSI  455 (456)
Q Consensus       449 ~~eai~~  455 (456)
                      .+|||++
T Consensus       414 ~deAi~~  420 (503)
T 1a4s_A          414 EEEVLQR  420 (503)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999975

>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}

Probab=100.00  E-value=1.7e-85  Score=684.70  Aligned_cols=394  Identities=34%  Similarity=0.545  Sum_probs=370.6

Q ss_pred             ccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 012806           57 YTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM  136 (456)
Q Consensus        57 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~  136 (456)
                      ..++||||+|+++.++++++++||.||+++++++.++.+|+++|+++|++||+  .|+.++..+|.++|+++++.|+++.
T Consensus        25 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~  102 (497)
T 3i44_A           25 KRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQ--TWKTTSPHERLGFVEKILEIYEKRS  102 (497)
T ss_dssp             ECCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred             ccCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHHH
Confidence            45799999999887888999999999999999999999999999999999999  8999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEE-eeccceEEEEccCCchHHHHHhH
Q 012806          137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTL-HEPIGVAGQIVPWNFPLLLFTWK  215 (456)
Q Consensus       137 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~Gvv~~i~p~N~P~~~~~~~  215 (456)
                      ++|++++++|+|||..+++..|+..+++.++|++............. .+...++. ++|+|||++|+|||||+.+.+++
T Consensus       103 ~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~  181 (497)
T 3i44_A          103 SDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEALI-EGNEQAILHYDAIGVVGLITPWNWPMNQVTLK  181 (497)
T ss_dssp             HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEESS-TTCSSCEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccc-CCceeEEEeecCceEEEEECCCcchHHHHHHH
Confidence            99999999999999999975699999999999998876644332221 23446777 99999999999999999999999


Q ss_pred             HHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHh
Q 012806          216 VAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA  295 (456)
Q Consensus       216 ~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a  295 (456)
                      +++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+.++.|+.||+||+|+||||+.+|+.|.+.++
T Consensus       182 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~~~aa  261 (497)
T 3i44_A          182 VIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNAS  261 (497)
T ss_dssp             HHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred             HHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999988899999999999999999999999999999998


Q ss_pred             hCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCC
Q 012806          296 KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG  375 (456)
Q Consensus       296 ~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~  375 (456)
                      + ++||+++|+|||||+||++||| |.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|++
T Consensus       262 ~-~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~  339 (497)
T 3i44_A          262 N-TLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTG  339 (497)
T ss_dssp             T-TTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSCS
T ss_pred             h-cCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence            8 8999999999999999999999 9999999999999999999999999999999999999999999999999999999


Q ss_pred             CccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCc-ccC--CCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccc
Q 012806          376 VEQGPQIDPEQFQKVLRYIRSGIESNATLECGGD-RLG--NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTD  451 (456)
Q Consensus       376 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~-~~~--~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~e  451 (456)
                      +++||++++++++++.++|++++++|+++++||. ...  ..|+|++|||+.+++++|+++.+ +||||++|+.|+|.+|
T Consensus       340 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de  419 (497)
T 3i44_A          340 NHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDE  419 (497)
T ss_dssp             SCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHH
T ss_pred             CccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecCCHHH
Confidence            9999999999999999999999999999999994 322  36999999999999999977775 9999999999999999


Q ss_pred             cccc
Q 012806          452 CTSI  455 (456)
Q Consensus       452 ai~~  455 (456)
                      ||++
T Consensus       420 Ai~~  423 (497)
T 3i44_A          420 AVTL  423 (497)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9975

>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}

Probab=100.00  E-value=1.4e-85  Score=686.21  Aligned_cols=397  Identities=32%  Similarity=0.529  Sum_probs=375.4

Q ss_pred             CCccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 012806           55 ISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK  134 (456)
Q Consensus        55 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~  134 (456)
                      ....++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|++
T Consensus        10 ~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~   87 (497)
T 3k2w_A           10 FKNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQK--AWAKLTARTRQNMLRTFANKIRE   87 (497)
T ss_dssp             CCTTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHT
T ss_pred             ccccceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence            3456899999999887889999999999999999999999999999999999999  89999999999999999999999


Q ss_pred             hHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCC-CCCcceEEEeeccceEEEEccCCchHHHHH
Q 012806          135 NMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFT  213 (456)
Q Consensus       135 ~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~  213 (456)
                      +.++|++++++|+|||..+++ .|+..+++.++||++++++..+...+. ..+...++.++|+|||++|+|||||+.+.+
T Consensus        88 ~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~  166 (497)
T 3k2w_A           88 NKHILAPMLVAEQGKLLSVAE-MEVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAG  166 (497)
T ss_dssp             THHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEECCCccHHHHHH
Confidence            999999999999999999998 699999999999999998877665543 245678899999999999999999999999


Q ss_pred             hHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHH
Q 012806          214 WKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQEL  293 (456)
Q Consensus       214 ~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~  293 (456)
                      +++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+.++.|+.|++||+|+||||+.+|+.|++.
T Consensus       167 ~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~~  246 (497)
T 3k2w_A          167 RKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKT  246 (497)
T ss_dssp             HHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHHHH
T ss_pred             HHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999888899999999999999999999999999999


Q ss_pred             HhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCC
Q 012806          294 AAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFK  373 (456)
Q Consensus       294 ~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~  373 (456)
                      +++ ++||+++|+|||+|+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||++
T Consensus       247 aa~-~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p~~  325 (497)
T 3k2w_A          247 SAE-YMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMD  325 (497)
T ss_dssp             HTT-TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTS
T ss_pred             hhh-cCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCC
Confidence            988 8999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcc--cCC--CCceEecEEEecCCCChHhhhc-cccceEEeEEEcc
Q 012806          374 SGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDR--LGN--RGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCV  448 (456)
Q Consensus       374 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~--~~~--~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~  448 (456)
                      +++++||++++++++++.++|++++++|+++++||.+  .+.  +|+|++|||+.+++++|+.+.+ +||||++|+.+++
T Consensus       326 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~  405 (497)
T 3k2w_A          326 ADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSS  405 (497)
T ss_dssp             TTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESC
T ss_pred             CCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeCC
Confidence            9999999999999999999999999999999999973  222  6999999999999999977775 9999999999999


Q ss_pred             ccccccc
Q 012806          449 VTDCTSI  455 (456)
Q Consensus       449 ~~eai~~  455 (456)
                      .+|||++
T Consensus       406 ~deAi~~  412 (497)
T 3k2w_A          406 MEQAIEF  412 (497)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999975

>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A

Probab=100.00  E-value=9.1e-85  Score=684.72  Aligned_cols=392  Identities=31%  Similarity=0.537  Sum_probs=374.2

Q ss_pred             ccCceeCCEEeeCCCCCeeeeecCCC-CceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 012806           57 YTKNLINGQFVDAASGKTFPVYDPRT-AEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKN  135 (456)
Q Consensus        57 ~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~  135 (456)
                      ..++||||+|+.  ++++++++||.| |+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|+++
T Consensus        37 ~~~~~I~G~~~~--~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~  112 (538)
T 3qan_A           37 EYPLIINGERVT--TEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQ--TWRNVNPEERANILVKAAAIIRRR  112 (538)
T ss_dssp             EECEEETTEEEC--CSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred             ccceeECCEEec--CCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHH
Confidence            457899999986  788999999999 999999999999999999999999999  899999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHh-hhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHh
Q 012806          136 MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGW-ADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTW  214 (456)
Q Consensus       136 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~  214 (456)
                      .++|++++++|+|||..+++ .|+..+++.++||++. .+...+...+...+...++.++|+|||++|+|||||+.+.++
T Consensus       113 ~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~  191 (538)
T 3qan_A          113 KHEFSAWLVHEAGKPWKEAD-ADTAEAIDFLEYYARQMIELNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVG  191 (538)
T ss_dssp             HHHHHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHTCBCCCCCTTEEEEEEEEECCEEEEECCSTTTTHHHHH
T ss_pred             HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCeeecccCCcceeeecCCCcEEEEECCCchHHHHHHH
Confidence            99999999999999999998 5999999999999998 566666666544567789999999999999999999999999


Q ss_pred             HHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHH
Q 012806          215 KVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA  294 (456)
Q Consensus       215 ~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~  294 (456)
                      ++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|..|++||+|+||||+.+|+.|++.+
T Consensus       192 ~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~a  271 (538)
T 3qan_A          192 TAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERA  271 (538)
T ss_dssp             HHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred             HHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999998888999999999999999999999999999999


Q ss_pred             hhCC------CccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhc
Q 012806          295 AKSN------LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIV  368 (456)
Q Consensus       295 a~~~------~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~  368 (456)
                      ++ +      +||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus       272 a~-~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~v  350 (538)
T 3qan_A          272 AV-VRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTV  350 (538)
T ss_dssp             TS-CCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCCB
T ss_pred             hh-ccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhccC
Confidence            87 6      8999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEc
Q 012806          369 GDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILC  447 (456)
Q Consensus       369 g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~  447 (456)
                      |||+|+++++||++++.+++++.++|++++++| ++++||......|+|++|||+.+++++|+++.+ +||||++|+.++
T Consensus       351 G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~  429 (538)
T 3qan_A          351 GDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKAN  429 (538)
T ss_dssp             SCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred             CCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEeC
Confidence            999999999999999999999999999999999 999999875447999999999999999977775 999999999999


Q ss_pred             cccccccc
Q 012806          448 VVTDCTSI  455 (456)
Q Consensus       448 ~~~eai~~  455 (456)
                      +.+|||++
T Consensus       430 ~~deAi~~  437 (538)
T 3qan_A          430 DFDHALEI  437 (538)
T ss_dssp             SHHHHHHH
T ss_pred             CHHHHHHH
Confidence            99999975

>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}

Probab=100.00  E-value=3.2e-85  Score=685.14  Aligned_cols=391  Identities=37%  Similarity=0.625  Sum_probs=372.7

Q ss_pred             ccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 012806           57 YTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM  136 (456)
Q Consensus        57 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~  136 (456)
                      ..++||||+|+++.++++++++||.||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|+++.
T Consensus        14 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~   91 (517)
T 3r31_A           14 KASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQK--EWAAMSPMARGRILKRAADIMRERN   91 (517)
T ss_dssp             SSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred             ccCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHH
Confidence            45799999999888889999999999999999999999999999999999999  8999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhH----hcCcccCCCCCcceEEEeeccceEEEEccCCchHHHH
Q 012806          137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADK----IHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLF  212 (456)
Q Consensus       137 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~  212 (456)
                      ++|++++++|+|||..++   |+..+++.++||++++++    +.+...+...+. .++.++|+|||++|+|||||+.+.
T Consensus        92 ~ela~~~~~e~Gk~~~ea---ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~~~~~-~~~~~~P~GVV~~I~PwN~P~~~~  167 (517)
T 3r31_A           92 DALSTLETLDTGKPIQET---IVADPTSGADAFEFFGGIAPSALNGDYIPLGGDF-AYTKRVPLGVCVGIGAWNYPQQIA  167 (517)
T ss_dssp             HHHHHHHHHHHCCCHHHH---HHHSHHHHHHHHHHHHHHHHHHTCCCEEECSSSE-EEEEEEECSEEEEECCSSSHHHHH
T ss_pred             HHHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHhhhccccccCcccccCCCc-ceEEEcCccEEEEECCCcchHHHH
Confidence            999999999999999887   999999999999999988    766665544455 899999999999999999999999


Q ss_pred             HhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHH
Q 012806          213 TWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE  292 (456)
Q Consensus       213 ~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~  292 (456)
                      ++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+| +.+.++.|+.|++||+|+||||+.+|+.|++
T Consensus       168 ~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~  246 (517)
T 3r31_A          168 CWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQG-DRDTGPLLVNHPDVAKVSLTGSVPTGRKVAA  246 (517)
T ss_dssp             HHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCC-CTTHHHHHHTCTTEEEEEEESCHHHHHHHHH
T ss_pred             HHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEEC-CHHHHHHHHhCCCcCEEeccCCHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999 8889999999999999999999999999999


Q ss_pred             HHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCC
Q 012806          293 LAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPF  372 (456)
Q Consensus       293 ~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~  372 (456)
                      .+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+
T Consensus       247 ~aa~-~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~  325 (517)
T 3r31_A          247 AAAG-HLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPL  325 (517)
T ss_dssp             HHHH-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBCCTT
T ss_pred             Hhhc-CCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCCCCC
Confidence            9998 899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccC---CCCceEecEEEecCCCChHhhhc-cccceEEeEEEcc
Q 012806          373 KSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG---NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCV  448 (456)
Q Consensus       373 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~---~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~  448 (456)
                      |+++++||++++++++++.++|++++++|+++++||...+   .+|+|++|||+.+++++|+++.+ +||||++|+.|+|
T Consensus       326 ~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~  405 (517)
T 3r31_A          326 DYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDD  405 (517)
T ss_dssp             STTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEEECC
T ss_pred             CcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECCccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEEeCC
Confidence            9999999999999999999999999999999999993121   37999999999999999977775 9999999999999


Q ss_pred             ccccccc
Q 012806          449 VTDCTSI  455 (456)
Q Consensus       449 ~~eai~~  455 (456)
                      .+|||++
T Consensus       406 ~deAi~~  412 (517)
T 3r31_A          406 EDEVLAR  412 (517)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999975

>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*

Probab=100.00  E-value=6.5e-85  Score=679.23  Aligned_cols=396  Identities=33%  Similarity=0.551  Sum_probs=374.7

Q ss_pred             CccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 012806           56 SYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKN  135 (456)
Q Consensus        56 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~  135 (456)
                      ...++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|+++
T Consensus         5 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~   82 (479)
T 2imp_A            5 VQHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQP--EWEALPAIERASWLRKISAGIRER   82 (479)
T ss_dssp             EECCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred             cccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHH
Confidence            345789999999776778999999999999999999999999999999999999  899999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCC-CCcceEEEeeccceEEEEccCCchHHHHHh
Q 012806          136 MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTW  214 (456)
Q Consensus       136 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~  214 (456)
                      .++|++++++|+|||+.+++ .|+..+++.++||++.+++..+...+.. .+...++.++|+|||++|+|||||+.+.++
T Consensus        83 ~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~  161 (479)
T 2imp_A           83 ASEISALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIAR  161 (479)
T ss_dssp             HHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEECCCchHHHHHHH
Confidence            99999999999999999997 6999999999999998887776654432 244678999999999999999999999999


Q ss_pred             HHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHH
Q 012806          215 KVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA  294 (456)
Q Consensus       215 ~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~  294 (456)
                      ++++||++||+||+|||+.+|+++..++++++++|+|+|++|+|+|++.++++.|..|+++|+|+||||+.+|+.|++.+
T Consensus       162 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~a  241 (479)
T 2imp_A          162 KMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATA  241 (479)
T ss_dssp             HHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred             HHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999998778899999999999999999999999999999


Q ss_pred             hhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCC-
Q 012806          295 AKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFK-  373 (456)
Q Consensus       295 a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~-  373 (456)
                      ++ ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+| 
T Consensus       242 a~-~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~  320 (479)
T 2imp_A          242 AK-NITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAER  320 (479)
T ss_dssp             HT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTC
T ss_pred             hc-cCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCcccc
Confidence            87 8999999999999999999999999999999999999999999999999999999999999999999999999999 


Q ss_pred             CCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEcccccc
Q 012806          374 SGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDC  452 (456)
Q Consensus       374 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~ea  452 (456)
                      +++++||++++.+++++.++|++++++|+++++||+..+..|+|++|||+.+++++|+.+.+ +||||++|+.++|.+||
T Consensus       321 ~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~eA  400 (479)
T 2imp_A          321 NDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDA  400 (479)
T ss_dssp             SSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHHHH
T ss_pred             CCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHHHH
Confidence            99999999999999999999999999999999999763346999999999999999977775 99999999999999999


Q ss_pred             ccc
Q 012806          453 TSI  455 (456)
Q Consensus       453 i~~  455 (456)
                      |++
T Consensus       401 i~~  403 (479)
T 2imp_A          401 ISM  403 (479)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            975

>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}

Probab=100.00  E-value=7.9e-85  Score=682.92  Aligned_cols=393  Identities=39%  Similarity=0.659  Sum_probs=373.7

Q ss_pred             cCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 012806           58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME  137 (456)
Q Consensus        58 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~  137 (456)
                      .++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|+++.+
T Consensus        27 ~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~  104 (515)
T 2d4e_A           27 ALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQ--RWSRTKAKERKRYLLRIAELIEKHAD  104 (515)
T ss_dssp             BCEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred             cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHH
Confidence            3689999999877788999999999999999999999999999999999999  89999999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCC-CCCcceEEEeeccceEEEEccCCchHHHHHhHH
Q 012806          138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKV  216 (456)
Q Consensus       138 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~  216 (456)
                      +|++++++|+|||..+++ .|+..+++.++||++++++..+...+. ..+...++.++|+|||++|+|||||+.+.++++
T Consensus       105 ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~  183 (515)
T 2d4e_A          105 ELAVMECLDAGQVLRIVR-AQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRI  183 (515)
T ss_dssp             HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEECCCCchhhhhhhhh
Confidence            999999999999999998 799999999999999998877765554 335567889999999999999999999999999


Q ss_pred             HHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhh
Q 012806          217 APALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK  296 (456)
Q Consensus       217 ~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~  296 (456)
                      ++||++||+||+|||+.+|+++..++++++++|+|+|++|+|+|++.++++.|..|++||+|+||||+.+|+.|++.+++
T Consensus       184 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~  263 (515)
T 2d4e_A          184 APALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAAD  263 (515)
T ss_dssp             HHHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGG
T ss_pred             hHHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhh
Confidence            99999999999999999999999999999999999999999999878899999999999999999999999999999998


Q ss_pred             CCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCC
Q 012806          297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGV  376 (456)
Q Consensus       297 ~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~  376 (456)
                       ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.|+++
T Consensus       264 -~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~  342 (515)
T 2d4e_A          264 -HLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPET  342 (515)
T ss_dssp             -GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTC
T ss_pred             -cCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccC
Confidence             8999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccC--------CCCceEecEEEecCCCChHhhhc-cccceEEeEEEc
Q 012806          377 EQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG--------NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILC  447 (456)
Q Consensus       377 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~--------~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~  447 (456)
                      ++||++++++++++.++|++++++|+++++||....        ..|+|++|||+.+ +++|+.+.+ +||||++|+.++
T Consensus       343 ~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~~  421 (515)
T 2d4e_A          343 EVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFK  421 (515)
T ss_dssp             SBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEES
T ss_pred             ccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEeeC
Confidence            999999999999999999999999999999997643        2699999999999 999977775 999999999999


Q ss_pred             cccccccc
Q 012806          448 VVTDCTSI  455 (456)
Q Consensus       448 ~~~eai~~  455 (456)
                      |.+|||++
T Consensus       422 ~~deAi~~  429 (515)
T 2d4e_A          422 DEEEALRK  429 (515)
T ss_dssp             SHHHHHHH
T ss_pred             CHHHHHHH
Confidence            99999975

>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}

Probab=100.00  E-value=1.2e-84  Score=677.63  Aligned_cols=395  Identities=36%  Similarity=0.614  Sum_probs=376.3

Q ss_pred             ccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 012806           57 YTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM  136 (456)
Q Consensus        57 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~  136 (456)
                      ..++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|+++.
T Consensus         9 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~   86 (481)
T 3jz4_A            9 RQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTAKERATILRNWFNLMMEHQ   86 (481)
T ss_dssp             CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred             ccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHHHH
Confidence            34689999999887889999999999999999999999999999999999999  8999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCC-CCCcceEEEeeccceEEEEccCCchHHHHHhH
Q 012806          137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWK  215 (456)
Q Consensus       137 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~  215 (456)
                      ++|++++++|+|||..+++ .|+..+++.++||+....+..+...+. ..+...++.++|+|||++|+|||||+.+.+++
T Consensus        87 ~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~  165 (481)
T 3jz4_A           87 DDLARLMTLEQGKPLAEAK-GEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRK  165 (481)
T ss_dssp             HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHH
T ss_pred             HHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEECCCcchHHHHHHH
Confidence            9999999999999999998 699999999999999887776665543 23566789999999999999999999999999


Q ss_pred             HHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHh
Q 012806          216 VAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA  295 (456)
Q Consensus       216 ~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a  295 (456)
                      +++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.+.++.|+.|++||+|+||||+.+|+.|++.++
T Consensus       166 ~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa  245 (481)
T 3jz4_A          166 AGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCA  245 (481)
T ss_dssp             HHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHT
T ss_pred             HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999988899999999999999999999999999999998


Q ss_pred             hCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCC
Q 012806          296 KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG  375 (456)
Q Consensus       296 ~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~  375 (456)
                      + +++|+++|+|||+|+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|++
T Consensus       246 ~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~  324 (481)
T 3jz4_A          246 K-DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNG  324 (481)
T ss_dssp             T-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTT
T ss_pred             h-cCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccCc
Confidence            8 899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEcccccccc
Q 012806          376 VEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTS  454 (456)
Q Consensus       376 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~  454 (456)
                      +++||++++.+++++.++|++++++|+++++||...+..|+|++|||+.+++++|+.+.+ +||||++|+.|++.+|||+
T Consensus       325 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~  404 (481)
T 3jz4_A          325 VTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIA  404 (481)
T ss_dssp             CCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHHHH
T ss_pred             CccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEECCHHHHHH
Confidence            999999999999999999999999999999999865556899999999999999977775 9999999999999999987


Q ss_pred             c
Q 012806          455 I  455 (456)
Q Consensus       455 ~  455 (456)
                      +
T Consensus       405 ~  405 (481)
T 3jz4_A          405 Q  405 (481)
T ss_dssp             H
T ss_pred             H
Confidence            5

>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}

Probab=100.00  E-value=5.1e-85  Score=684.14  Aligned_cols=396  Identities=28%  Similarity=0.429  Sum_probs=373.4

Q ss_pred             CCccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 012806           55 ISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK  134 (456)
Q Consensus        55 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~  134 (456)
                      +...++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|++
T Consensus        24 m~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~  101 (521)
T 4e4g_A           24 MYELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQP--KWAATNPQRRARVFMKFVQLLND  101 (521)
T ss_dssp             CEEECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHH
T ss_pred             hhccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence            3446899999999887889999999999999999999999999999999999999  89999999999999999999999


Q ss_pred             hHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccC-CCCCcceEEEeeccceEEEEccCCchHHHHH
Q 012806          135 NMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP-GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFT  213 (456)
Q Consensus       135 ~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~  213 (456)
                      +.++|++++++|+|||..+++ .|+..+++.++||++..+.+.+...+ ...+...++.++|+|||++|+|||||+.+.+
T Consensus       102 ~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~  180 (521)
T 4e4g_A          102 NMNELAEMLSREHGKTIDDAK-GDIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMIPM  180 (521)
T ss_dssp             HHHHHHHHHHHHHCSCHHHHH-HHHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEECCSSCTTHHHH
T ss_pred             HHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcEEEEECCCcchHHHHH
Confidence            999999999999999999998 69999999999999988777665433 2235567899999999999999999999999


Q ss_pred             hHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHH
Q 012806          214 WKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQEL  293 (456)
Q Consensus       214 ~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~  293 (456)
                      +++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|+ .+.+..|+.|++||+|+||||+.+|+.|++.
T Consensus       181 ~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~-~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~~  259 (521)
T 4e4g_A          181 WMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGD-KGAVDAILTHPDIAAVSFVGSTPIARYVYGT  259 (521)
T ss_dssp             HHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCC-HHHHHHHHTCTTCCEEEEESCHHHHHHHHHH
T ss_pred             HHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCC-hHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999994 5566999999999999999999999999999


Q ss_pred             HhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccc-cHHHHHHHHHHHHhhhhcCCCC
Q 012806          294 AAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHER-VYDEFVEKAKARAMRRIVGDPF  372 (456)
Q Consensus       294 ~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~-v~~~f~~~l~~~~~~~~~g~p~  372 (456)
                      +++ ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||++ +||+|+++|+++++++++|+|+
T Consensus       260 aa~-~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~~~  338 (521)
T 4e4g_A          260 AAM-NGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYT  338 (521)
T ss_dssp             HHH-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCCTT
T ss_pred             Hhh-cCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCCCC
Confidence            998 89999999999999999999999999999999999999999999999999999 9999999999999999999999


Q ss_pred             CCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCccc----CCCCceEecEEEecCCCChHhhhc-cccceEEeEEEc
Q 012806          373 KSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRL----GNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILC  447 (456)
Q Consensus       373 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~----~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~  447 (456)
                      ++++++||++++++++++.++|++++++|+++++||.+.    ..+|+|++||||.+++++|+++.+ +||||++|+.++
T Consensus       339 ~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~  418 (521)
T 4e4g_A          339 DEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRAR  418 (521)
T ss_dssp             CTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCBS
T ss_pred             CccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEeC
Confidence            999999999999999999999999999999999999752    247999999999999999977775 999999999999


Q ss_pred             cccccccc
Q 012806          448 VVTDCTSI  455 (456)
Q Consensus       448 ~~~eai~~  455 (456)
                      +.+|||++
T Consensus       419 ~~deAi~~  426 (521)
T 4e4g_A          419 NYEEALSL  426 (521)
T ss_dssp             SHHHHHHH
T ss_pred             CHHHHHHH
Confidence            99999975

>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A

Probab=100.00  E-value=2.2e-84  Score=675.93  Aligned_cols=392  Identities=35%  Similarity=0.598  Sum_probs=370.6

Q ss_pred             cCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 012806           58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME  137 (456)
Q Consensus        58 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~  137 (456)
                      .++||||+|+.+.+ ++++++||.||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|+++.+
T Consensus        24 ~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~  100 (495)
T 1wnd_A           24 HKLLINGELVSGEG-EKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFA--EWGQTTPKVRAECLLKLADVIEENGQ  100 (495)
T ss_dssp             CCEEETTEEECCCS-CEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred             cCeEECCEEecCCC-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHH
Confidence            46899999997655 8999999999999999999999999999999999999  89999999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCC-CCcceEEEeeccceEEEEccCCchHHHHHhHH
Q 012806          138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKV  216 (456)
Q Consensus       138 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~  216 (456)
                      +|++++++|+|||..+++..|+..+++.++||++++++..++..+.. .+...++.++|+|||++|+|||||+.+.++++
T Consensus       101 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~  180 (495)
T 1wnd_A          101 VFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKL  180 (495)
T ss_dssp             HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEECCCcchHHHHHHHH
Confidence            99999999999999998744999999999999999888766554432 24467889999999999999999999999999


Q ss_pred             HHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhh
Q 012806          217 APALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK  296 (456)
Q Consensus       217 ~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~  296 (456)
                      ++||++||+||+|||+.+|+++..++++++++ +|+|++|+|+|++.+.++.|+.|++||+|+||||+.+|+.|++.+++
T Consensus       181 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~  259 (495)
T 1wnd_A          181 APALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAS  259 (495)
T ss_dssp             HHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHGG
T ss_pred             HHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999 99999999999888899999999999999999999999999999998


Q ss_pred             CCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCC
Q 012806          297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGV  376 (456)
Q Consensus       297 ~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~  376 (456)
                       ++||+++|+|||+|+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||+|+++
T Consensus       260 -~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~  338 (495)
T 1wnd_A          260 -SIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDEST  338 (495)
T ss_dssp             -GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTC
T ss_pred             -cCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCccCCC
Confidence             8999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCHHHHHHHHHHHHHHHHcC-CeEEeCCc-ccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccc
Q 012806          377 EQGPQIDPEQFQKVLRYIRSGIESN-ATLECGGD-RLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCT  453 (456)
Q Consensus       377 ~~Gpli~~~~~~~v~~~i~~a~~~G-a~v~~gg~-~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai  453 (456)
                      ++||++++.+++++.++|++++++| +++++||. .. +.|+|++||||.+++++|+.+.+ +||||++|+.++|.+|||
T Consensus       339 ~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi  417 (495)
T 1wnd_A          339 ELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK-GNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVV  417 (495)
T ss_dssp             CBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS-SSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHH
T ss_pred             CccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccC-CCCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCHHHHH
Confidence            9999999999999999999999999 99999997 53 36999999999999999977775 999999999999999998


Q ss_pred             cc
Q 012806          454 SI  455 (456)
Q Consensus       454 ~~  455 (456)
                      ++
T Consensus       418 ~~  419 (495)
T 1wnd_A          418 NW  419 (495)
T ss_dssp             HH
T ss_pred             HH
Confidence            75

>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*

Probab=100.00  E-value=1.7e-84  Score=678.40  Aligned_cols=389  Identities=30%  Similarity=0.477  Sum_probs=369.9

Q ss_pred             ccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 012806           57 YTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM  136 (456)
Q Consensus        57 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~  136 (456)
                      ..++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|+++.
T Consensus        11 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~   88 (505)
T 3prl_A           11 NANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQK--IWKIRPIHERVDLLYAWADLLEERK   88 (505)
T ss_dssp             ECCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred             ccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence            34789999999887789999999999999999999999999999999999999  8999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCC--C----CcceEEEeeccceEEEEccCCchHH
Q 012806          137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD--G----NYHIQTLHEPIGVAGQIVPWNFPLL  210 (456)
Q Consensus       137 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~P~Gvv~~i~p~N~P~~  210 (456)
                      ++|++++++|+|||..+++ .|+..+++.++||++..++..+...+..  .    +...++.++|+|||++|+|||||+.
T Consensus        89 ~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~  167 (505)
T 3prl_A           89 EIIGELIMHEVAKPKKSAI-GEVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVN  167 (505)
T ss_dssp             HHHHHHHHHHHTCCHHHHH-HHHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTH
T ss_pred             HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHHH
Confidence            9999999999999999998 5999999999999999988766544322  1    4567889999999999999999999


Q ss_pred             HHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHH
Q 012806          211 LFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIV  290 (456)
Q Consensus       211 ~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i  290 (456)
                      +.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|..||++|+|+||||+.+|+.|
T Consensus       168 ~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i  247 (505)
T 3prl_A          168 LAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERI  247 (505)
T ss_dssp             HHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHH
T ss_pred             HHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999888999999999999999999999999999


Q ss_pred             HHHHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCC
Q 012806          291 QELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGD  370 (456)
Q Consensus       291 ~~~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~  370 (456)
                      ++.++   +||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++||
T Consensus       248 ~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~  324 (505)
T 3prl_A          248 SEKAK---MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGS  324 (505)
T ss_dssp             HHHCC---SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBSC
T ss_pred             HHHcc---CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccCC
Confidence            98876   799999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccc
Q 012806          371 PFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVV  449 (456)
Q Consensus       371 p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~  449 (456)
                      |+ +++++||++++++++++.++|++++++|+++++||+.   .|+|++|||+.+++++|+++.+ +||||++|+.|+|.
T Consensus       325 p~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~---~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~  400 (505)
T 3prl_A          325 PE-DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR---QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDA  400 (505)
T ss_dssp             TT-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESSH
T ss_pred             CC-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCCH
Confidence            99 9999999999999999999999999999999999974   5899999999999999977775 99999999999999


Q ss_pred             cccccc
Q 012806          450 TDCTSI  455 (456)
Q Consensus       450 ~eai~~  455 (456)
                      +|||++
T Consensus       401 deAi~~  406 (505)
T 3prl_A          401 NEAISL  406 (505)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999975

>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}

Probab=100.00  E-value=1.7e-83  Score=669.95  Aligned_cols=392  Identities=30%  Similarity=0.478  Sum_probs=371.0

Q ss_pred             ccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 012806           57 YTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM  136 (456)
Q Consensus        57 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~  136 (456)
                      ..++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|+++.
T Consensus         6 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~   83 (485)
T 4dng_A            6 LNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQK--EWAKSTTEDRKAVLQKARGYLHENR   83 (485)
T ss_dssp             CCSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTH
T ss_pred             ccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHHHH
Confidence            45789999999877889999999999999999999999999999999999999  8999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCC--CCcceEEEeeccceEEEEccCCchHHHHHh
Q 012806          137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD--GNYHIQTLHEPIGVAGQIVPWNFPLLLFTW  214 (456)
Q Consensus       137 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~  214 (456)
                      ++|++++++|+|||..+++. |+..+++.++|+++..+++.+...+..  .+...++.++|+|||++|+|||||+...++
T Consensus        84 ~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~  162 (485)
T 4dng_A           84 DDIIMMIARETGGTIIKSTI-ELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMR  162 (485)
T ss_dssp             HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred             HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEECCCccHHHHHHH
Confidence            99999999999999999984 999999999999999988777665532  346788999999999999999999999999


Q ss_pred             HHHHHhhcCCEEEEecCCCchHHH-HHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHH
Q 012806          215 KVAPALTCGNTIVLKSAEQTPLTA-LYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQEL  293 (456)
Q Consensus       215 ~~~~ALaaGN~vvlKps~~~p~~~-~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~  293 (456)
                      ++++||++||+||+|||+.+|+++ ..+.+++.++|+|+|++|+++|++.+.++.|+.|+++|+|+||||+.+|+.|.+.
T Consensus       163 ~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~~  242 (485)
T 4dng_A          163 SIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEI  242 (485)
T ss_dssp             HHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHHH
T ss_pred             HHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHHH
Confidence            999999999999999999999999 9999999999999999999999888899999999999999999999999999999


Q ss_pred             HhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCC
Q 012806          294 AAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFK  373 (456)
Q Consensus       294 ~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~  373 (456)
                      +++ ++||+++|+|||+|+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.|
T Consensus       243 aa~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~~~  321 (485)
T 4dng_A          243 AGR-AFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTD  321 (485)
T ss_dssp             HHH-HTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTS
T ss_pred             Hhh-hccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCCCc
Confidence            988 8999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEcccccc
Q 012806          374 SGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDC  452 (456)
Q Consensus       374 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~ea  452 (456)
                      +++++||++++.+++++.++|++++++|+++++||..   .|+|++|||+.+++++|+.+.+ +||||++|+.+++.+||
T Consensus       322 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eA  398 (485)
T 4dng_A          322 PKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR---VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEA  398 (485)
T ss_dssp             TTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHHHH
T ss_pred             CCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHHHH
Confidence            9999999999999999999999999999999999976   6899999999999999977775 99999999999999999


Q ss_pred             ccc
Q 012806          453 TSI  455 (456)
Q Consensus       453 i~~  455 (456)
                      |++
T Consensus       399 i~~  401 (485)
T 4dng_A          399 IDM  401 (485)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            975

>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*

Probab=100.00  E-value=9e-84  Score=671.08  Aligned_cols=391  Identities=34%  Similarity=0.559  Sum_probs=370.5

Q ss_pred             cCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 012806           58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME  137 (456)
Q Consensus        58 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~  137 (456)
                      .++||||+|+.+.  ++++++||.||+++++++.++.+|++.++++|++||+  .|+.++..+|.++|+++++.|+++.+
T Consensus        13 ~~~~i~g~~~~~~--~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~   88 (487)
T 2w8n_A           13 TDSFVGGRWLPAA--ATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFC--RWREVSAKERSSLLRKWYNLMIQNKD   88 (487)
T ss_dssp             CSEEETTEEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred             cCeeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHH
Confidence            3689999998643  7899999999999999999999999999999999999  89999999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCC-CCCcceEEEeeccceEEEEccCCchHHHHHhHH
Q 012806          138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKV  216 (456)
Q Consensus       138 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~  216 (456)
                      +|++++++|+|||..+++ .|+..+++.++||+++++++.+...+. ..+...++.++|+|||++|+|||||+.+.++++
T Consensus        89 ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~  167 (487)
T 2w8n_A           89 DLARIITAESGKPLKEAH-GEILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKV  167 (487)
T ss_dssp             HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHH
T ss_pred             HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHH
Confidence            999999999999999998 599999999999999988877665443 234567899999999999999999999999999


Q ss_pred             HHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEe---CCchhhHHHHhcCCCccEEEEecChhHHHHHHHH
Q 012806          217 APALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVS---GYGPTAGAALASHMDVDKLSFTGHCDTGKIVQEL  293 (456)
Q Consensus       217 ~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~---g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~  293 (456)
                      ++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+   |++.+.++.|.+|++||+|+||||+.+|+.|.+.
T Consensus       168 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~  247 (487)
T 2w8n_A          168 GAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHH  247 (487)
T ss_dssp             HHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHH
T ss_pred             HHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999   8777889999999999999999999999999999


Q ss_pred             HhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhh-hhcCCCC
Q 012806          294 AAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMR-RIVGDPF  372 (456)
Q Consensus       294 ~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~-~~~g~p~  372 (456)
                      +++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|||+
T Consensus       248 aa~-~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~  326 (487)
T 2w8n_A          248 AAN-SVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGF  326 (487)
T ss_dssp             HHT-TTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTT
T ss_pred             Hhc-cCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCcc
Confidence            987 89999999999999999999999999999999999999999999999999999999999999999999 9999999


Q ss_pred             CCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCc-eEecEEEecCCCChHhhhc-cccceEEeEEEcccc
Q 012806          373 KSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGY-FVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVT  450 (456)
Q Consensus       373 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~-~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~  450 (456)
                      ++++++||++++.+++++.++|++++++|+++++||... +.|+ |++|||+.+++++|+.+.+ +||||++|+.+++.+
T Consensus       327 ~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~-~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~  405 (487)
T 2w8n_A          327 EEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH-QLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEE  405 (487)
T ss_dssp             STTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBC-TTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCHH
T ss_pred             cccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC-CCCCceECCEEEecCCCcchhhhcccccceEEEEEeCCHH
Confidence            999999999999999999999999999999999999764 3689 9999999999999977765 999999999999999


Q ss_pred             ccccc
Q 012806          451 DCTSI  455 (456)
Q Consensus       451 eai~~  455 (456)
                      |||++
T Consensus       406 eAi~~  410 (487)
T 2w8n_A          406 EAIAI  410 (487)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99975

>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*

Probab=100.00  E-value=3.1e-83  Score=669.06  Aligned_cols=392  Identities=27%  Similarity=0.469  Sum_probs=368.9

Q ss_pred             ccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 012806           57 YTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM  136 (456)
Q Consensus        57 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~  136 (456)
                      .+++||||+|+.  ++++++++||.||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|+++.
T Consensus        23 ~~~~~i~g~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~   98 (500)
T 2j6l_A           23 ENEGVYNGSWGG--RGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWK--IWADIPAPKRGEIVRQIGDALREKI   98 (500)
T ss_dssp             EEECEESSSEEC--CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred             CCCceECCEEec--CCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence            458899999984  678999999999999999999999999999999999999  8999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCC-CCcceEEEeeccceEEEEccCCchHHHHHhH
Q 012806          137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWK  215 (456)
Q Consensus       137 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~  215 (456)
                      ++|++++++|+|||..+++ .|+..+++.++|+++..+++.+...+.. .+...++.++|+|||++|+|||||+.+.+++
T Consensus        99 ~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~  177 (500)
T 2j6l_A           99 QVLGSLVSLEMGKILVEGV-GEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWN  177 (500)
T ss_dssp             HHHHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSEEEEECCSSSTTHHHHHH
T ss_pred             HHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccEEEEECCCcchhhHHHHH
Confidence            9999999999999999986 6999999999999998877766654432 2445678899999999999999999999999


Q ss_pred             HHHHhhcCCEEEEecCCCchHHHHHHHHHHH----HcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHH
Q 012806          216 VAPALTCGNTIVLKSAEQTPLTALYVAKLFH----EAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQ  291 (456)
Q Consensus       216 ~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~----~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~  291 (456)
                      +++||++||+||+|||+.+|+++..+++++.    ++|+|+|++|+|+| +.++++.|..|+++|+|+||||+.+|+.|+
T Consensus       178 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g-~~~~g~~L~~~~~vd~I~FTGS~~~g~~i~  256 (500)
T 2j6l_A          178 NAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGKQVG  256 (500)
T ss_dssp             HHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECC-SHHHHHHHHHCTTCSEEEEESCHHHHHHHH
T ss_pred             HHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence            9999999999999999999999999988876    46999999999999 788999999999999999999999999999


Q ss_pred             HHHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCC
Q 012806          292 ELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDP  371 (456)
Q Consensus       292 ~~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p  371 (456)
                      +.+++ ++||+++|+|||+|+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||
T Consensus       257 ~~aa~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p  335 (500)
T 2j6l_A          257 LMVQE-RFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNP  335 (500)
T ss_dssp             HHHHH-TTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCT
T ss_pred             HHhcc-CCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCCc
Confidence            99998 89999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEcccc
Q 012806          372 FKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVT  450 (456)
Q Consensus       372 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~  450 (456)
                      .++++++||++++.+++++.++|++++++|+++++||...+..|+|++|||+.+++++|+.+.+ +||||++|+.|+|.+
T Consensus       336 ~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d  415 (500)
T 2j6l_A          336 WDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEE  415 (500)
T ss_dssp             TSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECCHH
T ss_pred             ccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCCHH
Confidence            9999999999999999999999999999999999999864456999999999999999977775 999999999999999


Q ss_pred             ccccc
Q 012806          451 DCTSI  455 (456)
Q Consensus       451 eai~~  455 (456)
                      |||++
T Consensus       416 eAi~~  420 (500)
T 2j6l_A          416 EVFAW  420 (500)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99975

>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}

Probab=100.00  E-value=4.9e-83  Score=665.85  Aligned_cols=392  Identities=33%  Similarity=0.523  Sum_probs=369.6

Q ss_pred             cCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 012806           58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME  137 (456)
Q Consensus        58 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~  137 (456)
                      .++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|+++.+
T Consensus         6 ~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~   83 (486)
T 1t90_A            6 LKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFK--TWSKVAVPRRARILFNFQQLLSQHKE   83 (486)
T ss_dssp             CCEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHTTHH
T ss_pred             cceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHH
Confidence            4789999999776788999999999999999999999999999999999999  89999999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccC-CCCCcceEEEeeccceEEEEccCCchHHHHHhHH
Q 012806          138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP-GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKV  216 (456)
Q Consensus       138 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~  216 (456)
                      +|++++++|+|||..+++ .|+..+++.++||++..+.+.+...+ ...+...++.++|+|||++|+|||||+.+.++++
T Consensus        84 ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~  162 (486)
T 1t90_A           84 ELAHLITIENGKNTKEAL-GEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMF  162 (486)
T ss_dssp             HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEECCSSCTTHHHHHHH
T ss_pred             HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEECCCchhHHHHHHHH
Confidence            999999999999999987 69999999999999877776665433 2234567889999999999999999999999999


Q ss_pred             HHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhh
Q 012806          217 APALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK  296 (456)
Q Consensus       217 ~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~  296 (456)
                      ++||++||+||+|||+.+|+++..++++++++|+|+|++|+|+| +.+.+..|+.|++||+|+||||+.+|+.|++.+++
T Consensus       163 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa~  241 (486)
T 1t90_A          163 PMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSE  241 (486)
T ss_dssp             HHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHH
T ss_pred             HHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEEC-CHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999999 56789999999999999999999999999999988


Q ss_pred             CCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcc-cccccccHHHHHHHHHHHHhhhhcCCCCCCC
Q 012806          297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSR-TYVHERVYDEFVEKAKARAMRRIVGDPFKSG  375 (456)
Q Consensus       297 ~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~-v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~  375 (456)
                       ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++| ||||++ +|+|+++|+++++++++|+|++++
T Consensus       242 -~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~~~~  319 (486)
T 1t90_A          242 -NLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGLDDG  319 (486)
T ss_dssp             -TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTTSTT
T ss_pred             -cCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCCccC
Confidence             89999999999999999999999999999999999999999999999 999999 999999999999999999999999


Q ss_pred             CccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccC-CCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccc
Q 012806          376 VEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG-NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCT  453 (456)
Q Consensus       376 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~-~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai  453 (456)
                      +++||++++.+++++.++|++++++|+++++||...+ .+|+|++|||+.+++++|+.+.+ +||||++|+.+++.+|+|
T Consensus       320 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~eai  399 (486)
T 1t90_A          320 VFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAI  399 (486)
T ss_dssp             CCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHH
T ss_pred             CccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHHHHH
Confidence            9999999999999999999999999999999997432 36999999999999999977775 999999999999999999


Q ss_pred             cc
Q 012806          454 SI  455 (456)
Q Consensus       454 ~~  455 (456)
                      ++
T Consensus       400 ~~  401 (486)
T 1t90_A          400 EI  401 (486)
T ss_dssp             HH
T ss_pred             HH
Confidence            75

>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*

Probab=100.00  E-value=3e-83  Score=665.99  Aligned_cols=381  Identities=29%  Similarity=0.479  Sum_probs=357.7

Q ss_pred             ceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 012806           60 NLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEEL  139 (456)
Q Consensus        60 ~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l  139 (456)
                      +||||+|+++  ++ ++++||.||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|+++.++|
T Consensus         2 ~~I~G~~~~~--~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el   76 (486)
T 3pqa_A            2 MFIDGKWINR--ED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKE--VMKNLPITKRYNILMNIAKQIKEKKEEL   76 (486)
T ss_dssp             -------CCC--CC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHH--HHHTCCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred             eeECCEEecC--CC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            5899999863  56 99999999999999999999999999999999999  8999999999999999999999999999


Q ss_pred             HHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHH
Q 012806          140 AALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPA  219 (456)
Q Consensus       140 a~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~A  219 (456)
                      ++++++|+|||..+++ .|+..+++.++||+++++++.+...+.+ +...++.++|+|||++|+|||||+.+.++++++|
T Consensus        77 a~~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A  154 (486)
T 3pqa_A           77 AKILAIDAGKPIKQAR-VEVERSIGTFKLAAFYVKEHRDEVIPSD-DRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPA  154 (486)
T ss_dssp             HHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHCCEEEECCT-TEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCceecCC-CceeEEEEccccEEEEECCCchHHHHHHHHHHHH
Confidence            9999999999999998 6999999999999999988776665544 5678899999999999999999999999999999


Q ss_pred             hhcCCEEEEecCCCchHHHHHHHHHHHHc----CCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHh
Q 012806          220 LTCGNTIVLKSAEQTPLTALYVAKLFHEA----GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA  295 (456)
Q Consensus       220 LaaGN~vvlKps~~~p~~~~~l~~ll~~a----GlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a  295 (456)
                      |++||+||+|||+.+|+++..+++++.++    |+|+|++|+|+|++.++++.|..|++||+|+||||+.+|+.|++.++
T Consensus       155 LaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa  234 (486)
T 3pqa_A          155 IATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG  234 (486)
T ss_dssp             HHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC
T ss_pred             HHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC
Confidence            99999999999999999999999999999    99999999999988888999999999999999999999999998875


Q ss_pred             hCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCC
Q 012806          296 KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG  375 (456)
Q Consensus       296 ~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~  375 (456)
                         +||+++|+|||+|+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|++
T Consensus       235 ---~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~  311 (486)
T 3pqa_A          235 ---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEK  311 (486)
T ss_dssp             ---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred             ---CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCC
Confidence               79999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEcccccccc
Q 012806          376 VEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTS  454 (456)
Q Consensus       376 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~  454 (456)
                      +++||++++++++++.++|++++++|+++++||..   .|+|++|||+ +++++|+++.+ +||||++|+.+++ +|||+
T Consensus       312 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~  386 (486)
T 3pqa_A          312 TDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR---DKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMID  386 (486)
T ss_dssp             CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH-HHHHH
T ss_pred             CCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCcEeccEEE-eCCCCChhhcccccccEEEEEEEcH-HHHHH
Confidence            99999999999999999999999999999999975   5899999999 99999977775 9999999999999 99987


Q ss_pred             c
Q 012806          455 I  455 (456)
Q Consensus       455 ~  455 (456)
                      +
T Consensus       387 ~  387 (486)
T 3pqa_A          387 I  387 (486)
T ss_dssp             H
T ss_pred             H
Confidence            5

>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}

Probab=100.00  E-value=5.6e-83  Score=668.39  Aligned_cols=393  Identities=34%  Similarity=0.524  Sum_probs=372.6

Q ss_pred             CccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 012806           56 SYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKN  135 (456)
Q Consensus        56 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~  135 (456)
                      ...++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|+++
T Consensus        11 ~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~   88 (508)
T 3r64_A           11 DATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQA--EWAATPAAERSAIIYRAAELLEEH   88 (508)
T ss_dssp             CTTSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred             cccceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHHh
Confidence            345799999999888889999999999999999999999999999999999999  899999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCC--CCcceEEEeeccceEEEEccCCchHHHHH
Q 012806          136 MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD--GNYHIQTLHEPIGVAGQIVPWNFPLLLFT  213 (456)
Q Consensus       136 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~  213 (456)
                      .++|++++++|+|||..+++ .|+..+++.++|+++..++..+ ..+..  .+...++.++|+|||++|+|||||+.+.+
T Consensus        89 ~~ela~~~~~e~Gk~~~~a~-~Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~  166 (508)
T 3r64_A           89 REEIVEWLIKESGSTRSKAN-LEITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSI  166 (508)
T ss_dssp             HHHHHHHHHHTSCCCHHHHH-HHHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHH
T ss_pred             HHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEECCCcchHHHHH
Confidence            99999999999999999998 5999999999999998877666 44432  34678899999999999999999999999


Q ss_pred             hHHHHHhhcCCEEEEecCCCchHHH-HHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHH
Q 012806          214 WKVAPALTCGNTIVLKSAEQTPLTA-LYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE  292 (456)
Q Consensus       214 ~~~~~ALaaGN~vvlKps~~~p~~~-~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~  292 (456)
                      +++++||++||+||+|||+.+|+++ ..+++++.++|+|+|++|+|+|++.+.++.|+.|+++|+|+||||+.+|+.|++
T Consensus       167 ~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~  246 (508)
T 3r64_A          167 RSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGE  246 (508)
T ss_dssp             HHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHHHH
T ss_pred             HHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHHHH
Confidence            9999999999999999999999999 999999999999999999999988899999999999999999999999999998


Q ss_pred             HHhhC-CCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCC
Q 012806          293 LAAKS-NLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDP  371 (456)
Q Consensus       293 ~~a~~-~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p  371 (456)
                      .+++. ++||+++|+|||+|+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||
T Consensus       247 ~aa~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p  326 (508)
T 3r64_A          247 LAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDP  326 (508)
T ss_dssp             HHHSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCBSCT
T ss_pred             HhhcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccCCCC
Confidence            88742 58999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEcccc
Q 012806          372 FKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVT  450 (456)
Q Consensus       372 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~  450 (456)
                      .++++++||++++++++++.++|++++++|+++++||..   .|+|++|||+.+++++|+.+.+ +||||++|+.|+|.+
T Consensus       327 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d  403 (508)
T 3r64_A          327 SAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI---EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEA  403 (508)
T ss_dssp             TSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE---ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESSHH
T ss_pred             ccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC---CCcEEecEEEecCCCCChhhcccccCceEEEEEeCCHH
Confidence            999999999999999999999999999999999999975   5899999999999999977775 999999999999999


Q ss_pred             ccccc
Q 012806          451 DCTSI  455 (456)
Q Consensus       451 eai~~  455 (456)
                      |||++
T Consensus       404 eAi~~  408 (508)
T 3r64_A          404 HAAEL  408 (508)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99875

>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*

Probab=100.00  E-value=4.9e-83  Score=669.98  Aligned_cols=390  Identities=32%  Similarity=0.517  Sum_probs=367.8

Q ss_pred             cCceeCCEEeeCCCCCeeeeecCC-CCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 012806           58 TKNLINGQFVDAASGKTFPVYDPR-TAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM  136 (456)
Q Consensus        58 ~~~~I~G~~~~~~~~~~~~v~~P~-tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~  136 (456)
                      .++||||+|+.  ++++++++||. ||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|+++.
T Consensus        38 ~~~~i~G~~~~--~~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~  113 (516)
T 1uzb_A           38 YPLYIGGEWVD--TKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK--TWKDWPQEDRSRLLLKAAALMRRRK  113 (516)
T ss_dssp             ECEEETTEEEC--CSSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred             cceeECCEEec--CCCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence            46899999985  46799999999 6999999999999999999999999999  8999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccC--CCCCcceEEEeeccceEEEEccCCchHHHHHh
Q 012806          137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP--GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTW  214 (456)
Q Consensus       137 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~  214 (456)
                      ++|++++++|+|||..+++ .|+..+++.++||++.++++.+...+  ...+...++.++|+|||++|+|||||+.+.++
T Consensus       114 ~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~  192 (516)
T 1uzb_A          114 RELEATLVYEVGKNWVEAS-ADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTG  192 (516)
T ss_dssp             HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHHH
T ss_pred             HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEECCCccHHHHHHH
Confidence            9999999999999999998 69999999999999999888775532  22345678899999999999999999999999


Q ss_pred             HHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHH
Q 012806          215 KVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA  294 (456)
Q Consensus       215 ~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~  294 (456)
                      ++++||++||+||+|||+.+|+++..++++++++|+|+|++|+|+|.+.+.++.|+.|++||+|+||||+.+|+.|++.+
T Consensus       193 ~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~a  272 (516)
T 1uzb_A          193 MIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAA  272 (516)
T ss_dssp             HHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHH
T ss_pred             HHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999998888999999999999999999999999999998


Q ss_pred             h------hCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhc
Q 012806          295 A------KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIV  368 (456)
Q Consensus       295 a------~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~  368 (456)
                      +      + ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus       273 a~~~~~~~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~  351 (516)
T 1uzb_A          273 GRLAPGQT-WFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSV  351 (516)
T ss_dssp             TSCCTTCC-SCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCB
T ss_pred             hhcccccc-ccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccC
Confidence            8      4 79999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEc
Q 012806          369 GDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILC  447 (456)
Q Consensus       369 g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~  447 (456)
                      ||| ++++++||++++.+++++.++|++++++| ++++||......|+|++|||+.+++++|+.+.+ +||||++|+.++
T Consensus       352 G~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~  429 (516)
T 1uzb_A          352 GPA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVK  429 (516)
T ss_dssp             SCG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEES
T ss_pred             CCC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeC
Confidence            999 99999999999999999999999999999 899999753346999999999999999977765 999999999999


Q ss_pred             cccccccc
Q 012806          448 VVTDCTSI  455 (456)
Q Consensus       448 ~~~eai~~  455 (456)
                      |.+|||++
T Consensus       430 ~~~eAi~~  437 (516)
T 1uzb_A          430 DFAEALEV  437 (516)
T ss_dssp             SHHHHHHH
T ss_pred             CHHHHHHH
Confidence            99999975

>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}

Probab=100.00  E-value=8e-83  Score=662.52  Aligned_cols=377  Identities=27%  Similarity=0.399  Sum_probs=362.4

Q ss_pred             eeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhh
Q 012806           74 TFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQ  153 (456)
Q Consensus        74 ~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~  153 (456)
                      +++++||.||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|+++.++|++++++|+|||..+
T Consensus         5 ~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e   82 (484)
T 3ros_A            5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYK--KWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSE   82 (484)
T ss_dssp             CCEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHH--HHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred             ccceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH
Confidence            589999999999999999999999999999999999  899999999999999999999999999999999999999999


Q ss_pred             hhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCC
Q 012806          154 SLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQ  233 (456)
Q Consensus       154 a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~  233 (456)
                      ++ .|+..+++.++||++.+++..+...+...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.
T Consensus        83 a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~  161 (484)
T 3ros_A           83 SK-EEVELCVSICNYYADHGPEMLKPTKLNSDLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHN  161 (484)
T ss_dssp             HH-HHHHHHHHHHHHHHHHHHHHTSCEEECCTTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTT
T ss_pred             HH-HHHHHHHHHHHHHHHHHHHhcCCeeccCCCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCC
Confidence            98 69999999999999999888877655445667899999999999999999999999999999999999999999999


Q ss_pred             chHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceE
Q 012806          234 TPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFI  313 (456)
Q Consensus       234 ~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~i  313 (456)
                      +|+++..|++++.++|+|+|++|+|+|++.+.++ |+.|++||+|+||||+.+|+.|++.+++ ++||+++|+|||+|+|
T Consensus       162 tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~-~lk~v~lELGGk~p~i  239 (484)
T 3ros_A          162 VPGSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGK-NLKKSTMELGGNDAFI  239 (484)
T ss_dssp             CHHHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHH-TTCEEEEECCCCCEEE
T ss_pred             ChHHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhc-cCCceEeecCCCCcce
Confidence            9999999999999999999999999998888888 9999999999999999999999999998 8999999999999999


Q ss_pred             EcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHH
Q 012806          314 IFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRY  393 (456)
Q Consensus       314 V~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~  393 (456)
                      |++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|+++++||++++++++++.++
T Consensus       240 V~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~  319 (484)
T 3ros_A          240 VLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQ  319 (484)
T ss_dssp             ECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHH
T ss_pred             eCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          394 IRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       394 i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      |++++++|+++++||...+.+|+|++|||+.+++++|+.+.+ +||||++|+.++|.+|||++
T Consensus       320 i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~  382 (484)
T 3ros_A          320 VKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQL  382 (484)
T ss_dssp             HHHHHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHH
T ss_pred             HHHHHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHH
Confidence            999999999999999865568999999999999999977775 99999999999999999975

>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}

Probab=100.00  E-value=5.1e-83  Score=665.22  Aligned_cols=392  Identities=34%  Similarity=0.557  Sum_probs=370.5

Q ss_pred             ccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 012806           57 YTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM  136 (456)
Q Consensus        57 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~  136 (456)
                      ..++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|+++.
T Consensus         7 ~~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~   84 (478)
T 3ty7_A            7 YTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYL--EFRHTSVKERQALLDKIVKEYENRK   84 (478)
T ss_dssp             CCEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHTH
T ss_pred             hhhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhH
Confidence            35789999999988889999999999999999999999999999999999999  8999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHH
Q 012806          137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKV  216 (456)
Q Consensus       137 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~  216 (456)
                      ++|++++++|+|||..+++..|+..+++.++|+++.+.+..+...    +...++.++|+|||++|+|||||+.+.++++
T Consensus        85 ~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~----~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~  160 (478)
T 3ty7_A           85 DDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEER----RGDDLVVKEAIGVSGLITPWNFPTNQTSLKL  160 (478)
T ss_dssp             HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEE----ETTEEEEEEECCCEEEECCSSSTTHHHHHHH
T ss_pred             HHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhcccC----CccceEEecCceEEEEECCCcchHHHHHHHH
Confidence            999999999999999999547999999999999999887765432    2357889999999999999999999999999


Q ss_pred             HHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhh
Q 012806          217 APALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK  296 (456)
Q Consensus       217 ~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~  296 (456)
                      ++||++||+||+|||+.+|+++..++++++++|+|+|++|+++|++.++++.|..|+++|+|+||||+.+|+.|.+.+++
T Consensus       161 ~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~aa~  240 (478)
T 3ty7_A          161 AAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAAK  240 (478)
T ss_dssp             HHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CSTTT
T ss_pred             HHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999888999999999999999999999999999999887


Q ss_pred             CCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCC
Q 012806          297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGV  376 (456)
Q Consensus       297 ~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~  376 (456)
                       +++|+++|+|||+|+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|+++
T Consensus       241 -~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~  319 (478)
T 3ty7_A          241 -DFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGT  319 (478)
T ss_dssp             -TTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTC
T ss_pred             -cCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCC
Confidence             8999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccC---CCCceEecEEEecCCCChHhhhc-cccceEEeEEEcccccc
Q 012806          377 EQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG---NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDC  452 (456)
Q Consensus       377 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~---~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~ea  452 (456)
                      ++||++++++++++.++|++++++|+++++||....   ..|+|++|||+.+++++|+.+.+ +||||++|+.++|.+||
T Consensus       320 ~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eA  399 (478)
T 3ty7_A          320 QVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEA  399 (478)
T ss_dssp             CBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHH
T ss_pred             ccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCHHHH
Confidence            999999999999999999999999999999994322   46999999999999999977775 99999999999999999


Q ss_pred             ccc
Q 012806          453 TSI  455 (456)
Q Consensus       453 i~~  455 (456)
                      |++
T Consensus       400 i~~  402 (478)
T 3ty7_A          400 IQI  402 (478)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            975

>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*

Probab=100.00  E-value=1.1e-82  Score=661.95  Aligned_cols=386  Identities=29%  Similarity=0.488  Sum_probs=364.5

Q ss_pred             cCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 012806           58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME  137 (456)
Q Consensus        58 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~  137 (456)
                      .++||||+|+.+.+  +++++||.||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|+++.+
T Consensus         5 ~~~~i~g~~~~~~~--~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~   80 (475)
T 1euh_A            5 YKNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQP--AWRALSYIERAAYLHKVADILMRDKE   80 (475)
T ss_dssp             CCEEETTEEECCSS--EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred             cceeECCEEecCCC--ceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHhHH
Confidence            37899999986543  999999999999999999999999999999999999  89999999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCC-CC----cce-EEEeeccceEEEEccCCchHHH
Q 012806          138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GN----YHI-QTLHEPIGVAGQIVPWNFPLLL  211 (456)
Q Consensus       138 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~----~~~-~~~~~P~Gvv~~i~p~N~P~~~  211 (456)
                      +|++++++|+|||..+++ .|+..+++.++||++++++..+...+.+ .+    ... ++.++|+|||++|+|||||+.+
T Consensus        81 ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~  159 (475)
T 1euh_A           81 KIGAILSKEVAKGYKSAV-SEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNL  159 (475)
T ss_dssp             HHHHHHHHHHTCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHH
T ss_pred             HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccceEEEECCCCchHHH
Confidence            999999999999999987 6999999999999998887766543322 23    355 8999999999999999999999


Q ss_pred             HHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHH
Q 012806          212 FTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQ  291 (456)
Q Consensus       212 ~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~  291 (456)
                      .++++++||++||+||+|||+.+|+++..++++++++|+|+|++|+|+|++.+.++.|..|+++|+|+||||+.+|+.|.
T Consensus       160 ~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~  239 (475)
T 1euh_A          160 AGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIG  239 (475)
T ss_dssp             HHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHHH
Confidence            99999999999999999999999999999999999999999999999998778899999999999999999999999999


Q ss_pred             HHHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCC
Q 012806          292 ELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDP  371 (456)
Q Consensus       292 ~~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p  371 (456)
                      +.++   +||+++|+|||+|+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||
T Consensus       240 ~~aa---~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p  316 (475)
T 1euh_A          240 KMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNP  316 (475)
T ss_dssp             HHTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCG
T ss_pred             HhcC---CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCCc
Confidence            9876   7999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEcccc
Q 012806          372 FKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVT  450 (456)
Q Consensus       372 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~  450 (456)
                      +| ++++||++++++++++.++|++++++|+++++||..   .|+|++||||.+++++|+.+.+ +||||++|+.++|.+
T Consensus       317 ~~-~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~---~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~  392 (475)
T 1euh_A          317 ED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVE  392 (475)
T ss_dssp             GG-TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHH
T ss_pred             cc-cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCHH
Confidence            99 999999999999999999999999999999999975   5899999999999999977775 999999999999999


Q ss_pred             ccccc
Q 012806          451 DCTSI  455 (456)
Q Consensus       451 eai~~  455 (456)
                      |+|++
T Consensus       393 eai~~  397 (475)
T 1euh_A          393 EAIEI  397 (475)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99975

>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*

Probab=100.00  E-value=2e-82  Score=662.71  Aligned_cols=387  Identities=27%  Similarity=0.417  Sum_probs=366.1

Q ss_pred             cCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 012806           58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME  137 (456)
Q Consensus        58 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~  137 (456)
                      .++||||+|+.+.  ++++++||.||+++++++.++.+|+++++++|++||+. .|+.++..+|.++|+++++.|+++.+
T Consensus        19 ~~~~i~g~~~~~~--~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~-~w~~~~~~~R~~~L~~~a~~l~~~~~   95 (501)
T 1uxt_A           19 YPSYLAGEWGGSG--QEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRW-SARDMPGTERLAVLRKAADIIERNLD   95 (501)
T ss_dssp             ECEECSSSEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHH-HHHTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred             cceeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhh-hhccCCHHHHHHHHHHHHHHHHHhHH
Confidence            4689999998653  78999999999999999999999999999999999962 49999999999999999999999999


Q ss_pred             HHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCC---CC--CcceEEEeeccceEEEEccCCchHHHH
Q 012806          138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG---DG--NYHIQTLHEPIGVAGQIVPWNFPLLLF  212 (456)
Q Consensus       138 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~P~Gvv~~i~p~N~P~~~~  212 (456)
                      +|++++++|+|||..+++ .|+..+++.++||++++++..+...+.   .+  +...++.++|+|||++|+|||||+.+.
T Consensus        96 ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~  174 (501)
T 1uxt_A           96 VFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDA  174 (501)
T ss_dssp             HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHHH
T ss_pred             HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEEEEECCCccHHHHH
Confidence            999999999999999998 699999999999999998877665443   22  336789999999999999999999999


Q ss_pred             HhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHH
Q 012806          213 TWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE  292 (456)
Q Consensus       213 ~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~  292 (456)
                      ++++++||++||+||+|||+.+|+++..++++++++|+|+|++|+|+|++ ++++.|..|+++|+|+||||+.+|+.|++
T Consensus       175 ~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~-~~g~~L~~~~~vd~I~FTGS~~~G~~i~~  253 (501)
T 1uxt_A          175 VNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGERVVK  253 (501)
T ss_dssp             HHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCH-HHHHHHHTCTTCCEEEEESCHHHHHHHHH
T ss_pred             HHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCc-HHHHHHHhCCCcCEEEEeCcHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999977 88999999999999999999999999999


Q ss_pred             HHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCC
Q 012806          293 LAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPF  372 (456)
Q Consensus       293 ~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~  372 (456)
                      .++   +||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+
T Consensus       254 ~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~  330 (501)
T 1uxt_A          254 VGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPR  330 (501)
T ss_dssp             HHC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTT
T ss_pred             hcC---CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCcc
Confidence            876   79999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCC-ceEecEEEecCC---CChHhhhc-cccceEEeEEEc
Q 012806          373 KSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRG-YFVQPTVFSDVT---VSFISLLQ-FLIPIFSFIILC  447 (456)
Q Consensus       373 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g-~~i~PtVl~~v~---~~~~~~~~-~fgPv~~vv~~~  447 (456)
                      |+++++||++++++++++.++|++++++|+++++||..   .| +|++|||+.+++   ++|+.+.+ +||||++|+.++
T Consensus       331 ~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~---~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~~  407 (501)
T 1uxt_A          331 DPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR---LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVK  407 (501)
T ss_dssp             STTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB---CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEES
T ss_pred             ccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEeeC
Confidence            99999999999999999999999999999999999975   58 999999999999   99977775 999999999999


Q ss_pred             cccccccc
Q 012806          448 VVTDCTSI  455 (456)
Q Consensus       448 ~~~eai~~  455 (456)
                      |.+|||++
T Consensus       408 ~~deAi~~  415 (501)
T 1uxt_A          408 DLDQAIEL  415 (501)
T ss_dssp             SHHHHHHH
T ss_pred             CHHHHHHH
Confidence            99999975

>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}

Probab=100.00  E-value=4.1e-82  Score=659.55  Aligned_cols=390  Identities=27%  Similarity=0.367  Sum_probs=368.2

Q ss_pred             CceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 012806           59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEE  138 (456)
Q Consensus        59 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~  138 (456)
                      ++||||+|+++ ++.+++++||.||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|+++.++
T Consensus         7 ~~~I~G~~~~~-~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~e   83 (490)
T 3ju8_A            7 THYIAGQWLAG-QGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFP--AWARRPLEQRIELLERFAATLKSRADE   83 (490)
T ss_dssp             CEEETTEEECC-CSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred             CceECCEEecC-CCCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence            78999999975 357899999999999999999999999999999999999  899999999999999999999999999


Q ss_pred             HHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHH
Q 012806          139 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAP  218 (456)
Q Consensus       139 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~  218 (456)
                      |++++++|+|||..+++ .|+..+++.++|+++..++..+...+...+...+..++|+|||++|+|||||+.+.++++++
T Consensus        84 la~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~  162 (490)
T 3ju8_A           84 LARVIGEETGKPLWESA-TEVTSMVNKVAISVQAFRERTGEKSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVP  162 (490)
T ss_dssp             HHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHSCCEEEEETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHH
T ss_pred             HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccccCCCCeeeEEECCCCEEEEECCCcchHHHHHHHHHH
Confidence            99999999999999998 69999999999999988877766543223345677799999999999999999999999999


Q ss_pred             HhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCC
Q 012806          219 ALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN  298 (456)
Q Consensus       219 ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~  298 (456)
                      ||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+| +.+.++.|+.|+++|+|+||||+.+|+.|.+.+++ +
T Consensus       163 ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~-~  240 (490)
T 3ju8_A          163 ALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGG-Q  240 (490)
T ss_dssp             HHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCC-SHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTT-C
T ss_pred             HHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhc-c
Confidence            999999999999999999999999999999999999999999 67899999999999999999999999999999888 8


Q ss_pred             CccE-EEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCccccccccc-HHHHHHHHHHHHhhhhcCC-CCCCC
Q 012806          299 LKPV-TLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERV-YDEFVEKAKARAMRRIVGD-PFKSG  375 (456)
Q Consensus       299 ~~~v-~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v-~~~f~~~l~~~~~~~~~g~-p~~~~  375 (456)
                      ++|+ ++|+|||+|+||++|||+|.|++.+++++|.|+||.|++++|+|||+++ ||+|+++|+++++++++|+ |.|++
T Consensus       241 ~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~  320 (490)
T 3ju8_A          241 PQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPA  320 (490)
T ss_dssp             TTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSC
T ss_pred             CCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCCc
Confidence            8998 8999999999999999999999999999999999999999999999996 9999999999999999999 99999


Q ss_pred             CccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEcccccccc
Q 012806          376 VEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTS  454 (456)
Q Consensus       376 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~  454 (456)
                      +++||++++++++++.++|++++++|+++++||...+.+|+|++|||+. ++++|+.+.+ +||||++|+.|++.+|||+
T Consensus       321 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~  399 (490)
T 3ju8_A          321 PFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSDFAAAIR  399 (490)
T ss_dssp             CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEESSHHHHHH
T ss_pred             CccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEE-eCCCCccccccccccEEEEEEeCCHHHHHH
Confidence            9999999999999999999999999999999998766689999999998 9999977765 9999999999999999987


Q ss_pred             c
Q 012806          455 I  455 (456)
Q Consensus       455 ~  455 (456)
                      +
T Consensus       400 ~  400 (490)
T 3ju8_A          400 E  400 (490)
T ss_dssp             H
T ss_pred             H
Confidence            5

>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A

Probab=100.00  E-value=8.8e-82  Score=663.52  Aligned_cols=395  Identities=23%  Similarity=0.333  Sum_probs=366.7

Q ss_pred             CCccCceeCCEEeeCCCCCeeeeecCCC-CceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 012806           55 ISYTKNLINGQFVDAASGKTFPVYDPRT-AEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIE  133 (456)
Q Consensus        55 ~~~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~  133 (456)
                      ....++||||+|+.+  +..+.++||.| |+++++++.++.+|+++||++|++||+  .|+.++..+|.++|+++++.|+
T Consensus        61 ~~~~~~~I~G~~~~~--~~~~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~iL~~~a~~l~  136 (563)
T 4e3x_A           61 TEAIPCVVGDEEVWT--SDIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARK--EWDLKPMADRAQVFLKAADMLS  136 (563)
T ss_dssp             CEECCEEETTEEECC--SCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHH
T ss_pred             CccCCeEECCEEeec--CCceeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHH
Confidence            345689999999864  45778999998 899999999999999999999999999  8999999999999999999999


Q ss_pred             Hh-HHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccC-CCCCcceEEEeeccceEEEEccCCchHHH
Q 012806          134 KN-MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP-GDGNYHIQTLHEPIGVAGQIVPWNFPLLL  211 (456)
Q Consensus       134 ~~-~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~  211 (456)
                      ++ +++|+.++++|+|||..+++..++..++++++||++.+.++.+.... .+.+...+.++.|+|||++|+|||||+..
T Consensus       137 ~~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwNfP~~~  216 (563)
T 4e3x_A          137 GPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIG  216 (563)
T ss_dssp             TTTHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEECCSSCHHHH
T ss_pred             hccHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEECCchHHHHH
Confidence            98 99999999999999999998544999999999999999888765432 22233456667788999999999999999


Q ss_pred             HHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHH
Q 012806          212 FTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQ  291 (456)
Q Consensus       212 ~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~  291 (456)
                      ..+++++|| +||+||+|||+.+|+++..++++|+++|+|+|++|+|+|++.++++.|..|++|++|+||||+.+|+.|.
T Consensus       217 ~~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~  295 (563)
T 4e3x_A          217 GNLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLW  295 (563)
T ss_dssp             HHHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHH
T ss_pred             HHHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence            999999999 5999999999999999999999999999999999999998889999999999999999999999999999


Q ss_pred             HHHhhCCCc------cEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhh
Q 012806          292 ELAAKSNLK------PVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMR  365 (456)
Q Consensus       292 ~~~a~~~~~------~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~  365 (456)
                      +.+++ ++|      |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++++
T Consensus       296 ~~aa~-~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~  374 (563)
T 4e3x_A          296 RQVAQ-NLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSR  374 (563)
T ss_dssp             HHHHH-TTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHT
T ss_pred             HHHHh-hCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHHHh
Confidence            99998 777      49999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcCCC-CCCCCccCCCCCHHHHHHHHHHHHHHHH-cCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEE
Q 012806          366 RIVGDP-FKSGVEQGPQIDPEQFQKVLRYIRSGIE-SNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFS  442 (456)
Q Consensus       366 ~~~g~p-~~~~~~~Gpli~~~~~~~v~~~i~~a~~-~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~  442 (456)
                      +++||| .|+++++||++++.+++++.++|+++++ +|+++++||.....+|+|++|||+.+++++|+++.+ +||||++
T Consensus       375 l~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~  454 (563)
T 4e3x_A          375 IKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLT  454 (563)
T ss_dssp             CCBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSSEEE
T ss_pred             ccCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCeEEE
Confidence            999999 9999999999999999999999999996 899999999876668999999999999999977775 9999999


Q ss_pred             eEEEcc--ccccccc
Q 012806          443 FIILCV--VTDCTSI  455 (456)
Q Consensus       443 vv~~~~--~~eai~~  455 (456)
                      |+.|++  .+|||++
T Consensus       455 V~~~~d~~~deAi~~  469 (563)
T 4e3x_A          455 VYVYPDDKYRETLKL  469 (563)
T ss_dssp             EEEECGGGHHHHHHH
T ss_pred             EEEECCCCHHHHHHH
Confidence            999997  5898875

>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A

Probab=100.00  E-value=4.2e-80  Score=641.02  Aligned_cols=380  Identities=26%  Similarity=0.414  Sum_probs=361.1

Q ss_pred             CCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCC
Q 012806           71 SGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKP  150 (456)
Q Consensus        71 ~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~  150 (456)
                      +..+++++||.||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|+++.++|++++++|+|||
T Consensus         5 s~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~   82 (462)
T 3etf_A            5 TATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFK--KWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKP   82 (462)
T ss_dssp             -CCCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC
T ss_pred             ccCccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            456899999999999999999999999999999999999  899999999999999999999999999999999999999


Q ss_pred             hhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEec
Q 012806          151 YVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKS  230 (456)
Q Consensus       151 ~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKp  230 (456)
                      ..+++ .|+..+++.++||++..++..+.......+...++.++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus        83 ~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKp  161 (462)
T 3etf_A           83 IKQAR-AEVTKSAALCDWYAEHGPAMLNPEPTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKH  161 (462)
T ss_dssp             HHHHH-HHHHHHHHHHHHHHHHHHHHTSCEECSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEEC
T ss_pred             HHHHH-HHHHHHHHHHHHHHHhHHHhcCCcccCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEEC
Confidence            99998 69999999999999998887766532223556789999999999999999999999999999999999999999


Q ss_pred             CCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCC
Q 012806          231 AEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKS  310 (456)
Q Consensus       231 s~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~  310 (456)
                      |+.+|+++..+++++.++|+|+|++|+|+| +.+.+..|+.|++++.|+||||+.+|+.|.+.+++ +++|+++|+|||+
T Consensus       162 s~~tp~~~~~l~~~l~~aglP~gv~~vv~g-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~-~~~~v~lElGGk~  239 (462)
T 3etf_A          162 APNVTGCAQMIARILAEAGTPAGVYGWVNA-NNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGA-ALKKCVLELGGSD  239 (462)
T ss_dssp             CTTCHHHHHHHHHHHHHTTCCBTTEEECCC-CHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHH-TTCCEEEECCCCE
T ss_pred             CCCCcHHHHHHHHHHHHhCCCcCeEEEEEC-CHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhc-cCCceEEEcCCCC
Confidence            999999999999999999999999999999 56778899999999999999999999999999998 8999999999999


Q ss_pred             ceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHH
Q 012806          311 PFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKV  390 (456)
Q Consensus       311 ~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v  390 (456)
                      |+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.++++++||++++++++++
T Consensus       240 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v  319 (462)
T 3etf_A          240 PFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDEL  319 (462)
T ss_dssp             EEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHH
T ss_pred             ccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          391 LRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       391 ~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      .++|++++++|+++++||...+..|+|++|||+.+++++|+.+.+ +||||++|+.+++.+|||++
T Consensus       320 ~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~  385 (462)
T 3etf_A          320 HQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALAL  385 (462)
T ss_dssp             HHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHH
T ss_pred             HHHHHHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHH
Confidence            999999999999999999866667999999999999999977775 99999999999999999975

>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}

Probab=100.00  E-value=2.3e-79  Score=678.37  Aligned_cols=393  Identities=30%  Similarity=0.465  Sum_probs=371.5

Q ss_pred             ccCceeCCEEeeCCCCCeeeeecCCC-CceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 012806           57 YTKNLINGQFVDAASGKTFPVYDPRT-AEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKN  135 (456)
Q Consensus        57 ~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~  135 (456)
                      ..++||||+|+.  ++++++++||.| |+++++++.++.+|+++|+++|++||+  .|+.++..+|.++|+++++.|+++
T Consensus       531 ~~~~~I~G~~~~--~~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eRa~iL~~~Adll~~~  606 (1026)
T 4f9i_A          531 TYPLFINGKEVR--TNDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFP--AWRDTDPRTRAEYLLKAAQAARKR  606 (1026)
T ss_dssp             EECEEETTEEEC--CSCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHT
T ss_pred             ccCceECCEEec--CCCcEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHHH
Confidence            457899999986  578999999998 999999999999999999999999999  899999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCC-CCCcceEEEeeccceEEEEccCCchHHHHHh
Q 012806          136 MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTW  214 (456)
Q Consensus       136 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~  214 (456)
                      +++|+.++++|+|||..++. .|+..++++++||+..++++.+...+. ..+...+..++|+|||++|+|||||+.+.++
T Consensus       607 ~~eLa~~~~~E~GK~~~ea~-~Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~  685 (1026)
T 4f9i_A          607 LFELSAWQVLEIGKQWDQAY-ADVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMG  685 (1026)
T ss_dssp             HHHHHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEECCSSSTTHHHHH
T ss_pred             HHHHHHHHHHHhCCChhhHH-HHHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeCCCccHHHHHHH
Confidence            99999999999999999998 699999999999999998877654332 3456678899999999999999999999999


Q ss_pred             HHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHH
Q 012806          215 KVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA  294 (456)
Q Consensus       215 ~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~  294 (456)
                      ++++||++||+||+|||+.+|+++..++++++++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|.+.+
T Consensus       686 ~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~a  765 (1026)
T 4f9i_A          686 MASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERA  765 (1026)
T ss_dssp             HHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred             HHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999989999999999999999999999999999998


Q ss_pred             hh-----CCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcC
Q 012806          295 AK-----SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVG  369 (456)
Q Consensus       295 a~-----~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g  369 (456)
                      +.     .++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++|
T Consensus       766 a~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~vG  845 (1026)
T 4f9i_A          766 AKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVG  845 (1026)
T ss_dssp             TSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBC
T ss_pred             hcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhcccC
Confidence            83     3789999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEcc
Q 012806          370 DPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCV  448 (456)
Q Consensus       370 ~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~  448 (456)
                      +|.|+++++||+|++.+++++.++|++++++| ++++||....+.|+|++|||+.+++++|+.+.+ +||||++|+.+++
T Consensus       846 ~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d  924 (1026)
T 4f9i_A          846 PSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKD  924 (1026)
T ss_dssp             CTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEESS
T ss_pred             CcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEEeCC
Confidence            99999999999999999999999999999999 999999765445999999999999999977665 9999999999999


Q ss_pred             ccccccc
Q 012806          449 VTDCTSI  455 (456)
Q Consensus       449 ~~eai~~  455 (456)
                      .+|+|++
T Consensus       925 ~deAI~~  931 (1026)
T 4f9i_A          925 FDQAIEW  931 (1026)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999875

>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}

Probab=100.00  E-value=6.8e-79  Score=633.20  Aligned_cols=379  Identities=27%  Similarity=0.387  Sum_probs=353.5

Q ss_pred             CCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcC
Q 012806           69 AASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNG  148 (456)
Q Consensus        69 ~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~G  148 (456)
                      +.+++|++++||.|||++++++.++.+|+++||++|++||+  .|++++..+|.++|+++++.|++|+++|++++++|+|
T Consensus         2 ~a~~~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~G   79 (474)
T 4h7n_A            2 NAMTKTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQS--RWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTG   79 (474)
T ss_dssp             CCCCCCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHH--HHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHS
T ss_pred             CCCCCEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            34678999999999999999999999999999999999999  8999999999999999999999999999999999999


Q ss_pred             CChhhhhhccHHHHHHHHHHHHHhhhHhcCccc-C-CCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEE
Q 012806          149 KPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTV-P-GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTI  226 (456)
Q Consensus       149 k~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~v  226 (456)
                      |+... . .|+..++..+++|++...+...... . ...+...+..++|+|||++|+|||||+.+.++++++||++||+|
T Consensus        80 k~~~~-~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~V  157 (474)
T 4h7n_A           80 RLSIT-V-LEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAV  157 (474)
T ss_dssp             CSHHH-H-HHHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEE
T ss_pred             CcHHH-H-HHHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCce
Confidence            98644 3 5999999999999988877654332 2 22344567788999999999999999999999999999999999


Q ss_pred             EEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEec
Q 012806          227 VLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLEL  306 (456)
Q Consensus       227 vlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lel  306 (456)
                      |+|||+.+|.++..+++++.++|+|+|++++++| +.+.+..|..|  +|+|+||||+.+|+.|++.+++ ++||+++|+
T Consensus       158 VlKps~~tp~~~~~l~~~~~~ag~p~gv~~~v~g-~~~~~~~l~~~--v~~v~FTGS~~~G~~i~~~aa~-~~~~v~lEl  233 (474)
T 4h7n_A          158 VVKPSEIAPRFVAPLLMALNTVPELRDVLIFVEG-GGETGANLINY--VDFVCFTGSVATGREVAETAAR-RFIPAYLEL  233 (474)
T ss_dssp             EEEECTTSCTTHHHHHHHHTTCTTTTTTEEECCC-CHHHHHHHHTT--CSEEEEESCHHHHHHHHHHHHH-HTCCEEEEC
T ss_pred             eecccccCchHHHHHHhhhhhhcccccceeeccc-cchhhhhhhhc--cceEEeccccchhhhhhhhhhc-ccccccccC
Confidence            9999999999999999999999999999999999 66778888865  9999999999999999999998 899999999


Q ss_pred             CCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHH
Q 012806          307 GGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQ  386 (456)
Q Consensus       307 gG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~  386 (456)
                      |||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++|++|+++|+++++++++|+|.++++++||++++.+
T Consensus       234 GGk~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~  313 (474)
T 4h7n_A          234 GGKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQ  313 (474)
T ss_dssp             CCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHH
T ss_pred             CCcCccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHcCCeEEeCCcccC-CCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          387 FQKVLRYIRSGIESNATLECGGDRLG-NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       387 ~~~v~~~i~~a~~~Ga~v~~gg~~~~-~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      ++++.+++++++++|+++++||...+ .+|+|++|||+.+++++|+.+.| +||||++|+.|+|.||||++
T Consensus       314 ~~~v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~  384 (474)
T 4h7n_A          314 AGIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYL  384 (474)
T ss_dssp             HHHHHHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHH
T ss_pred             HHHHHHHHHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHH
Confidence            99999999999999999999997643 56899999999999999977776 99999999999999999975

>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*

Probab=100.00  E-value=1.1e-78  Score=639.96  Aligned_cols=389  Identities=23%  Similarity=0.300  Sum_probs=351.5

Q ss_pred             cCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHh-cccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 012806           58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKA-FDEGPWPKMTPYERSRIMLRAADLIEKNM  136 (456)
Q Consensus        58 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a-~~~~~w~~~~~~~R~~iL~~~a~~l~~~~  136 (456)
                      .++||||+|+.+.+ .+++++||.||+++++++.++ +|+++|+++|++| |+  .|+.++..+|.++|+++++.|++++
T Consensus         8 ~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~--~w~~~~~~~R~~~L~~~a~~l~~~~   83 (534)
T 2y53_A            8 LKNHVAGQWIAGTG-AGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGA--ALRALTYAQRAARLADIVKLLQAKR   83 (534)
T ss_dssp             CCEEETTEEECCSS-SCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred             hhhEECCEEecCCC-CeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhh--hhhhCCHHHHHHHHHHHHHHHHHhH
Confidence            57899999996544 589999999999999999987 9999999999999 58  8999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCc-------ccCCC--CCcceEEEeecc-ceEEEEccCC
Q 012806          137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL-------TVPGD--GNYHIQTLHEPI-GVAGQIVPWN  206 (456)
Q Consensus       137 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~-------~~~~~--~~~~~~~~~~P~-Gvv~~i~p~N  206 (456)
                      ++|++++++|+|||..+++ .|+..+++.++||+..++++.+.       ..+..  +....+..++|+ |||++|+|||
T Consensus        84 ~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN  162 (534)
T 2y53_A           84 GDYYAIATANSGTTRNDSA-VDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFN  162 (534)
T ss_dssp             HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCTT
T ss_pred             HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCCc
Confidence            9999999999999999997 59999999999999988766432       12221  222457889997 9999999999


Q ss_pred             chHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcC-CCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChh
Q 012806          207 FPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAG-LPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCD  285 (456)
Q Consensus       207 ~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aG-lP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~  285 (456)
                      ||+.+.++++++||++||+||+|||+.+|+++..+++++.++| +|+|++|+|+|++.+++..|   +++|+|+||||+.
T Consensus       163 ~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~l~~~l---~~vd~V~FTGS~~  239 (534)
T 2y53_A          163 FPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAGLLDQI---RSFDVVSFTGSAD  239 (534)
T ss_dssp             CTTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTTSGGGC---CTTCEEEEESCHH
T ss_pred             hHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHHHHhcc---cccCEEEEECCHH
Confidence            9999999999999999999999999999999999999999999 89999999999665433332   5799999999999


Q ss_pred             HHHHHHHHHh-hCCCccEEEecCCCCceEEcCCC-----CHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHH
Q 012806          286 TGKIVQELAA-KSNLKPVTLELGGKSPFIIFDDA-----DVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA  359 (456)
Q Consensus       286 ~g~~i~~~~a-~~~~~~v~lelgG~~~~iV~~da-----D~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l  359 (456)
                      +|+.|++.++ ..++||+++|+|||||+||++||     |+|.|++.+++++|.|+||.|++++|||||+++||+|+++|
T Consensus       240 ~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l  319 (534)
T 2y53_A          240 TAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEAL  319 (534)
T ss_dssp             HHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHH
T ss_pred             HHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHHHH
Confidence            9999998764 23899999999999999999999     99999999999999999999999999999999999999999


Q ss_pred             HHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCccc------CCCCceEecEEEecCCCC--hH
Q 012806          360 KARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRL------GNRGYFVQPTVFSDVTVS--FI  431 (456)
Q Consensus       360 ~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~------~~~g~~i~PtVl~~v~~~--~~  431 (456)
                      +++++++++|||+|+++++||++++.+++++.++|+++ .+|+++++||...      ...|+|++||||.+++++  |+
T Consensus       320 ~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~  398 (534)
T 2y53_A          320 KAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATL  398 (534)
T ss_dssp             HHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCSS
T ss_pred             HHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEecCccccCH
Confidence            99999999999999999999999999999999999999 6899999999742      136999999999999987  45


Q ss_pred             hhhc-cccceEEeEEEc---cc-----cccccc
Q 012806          432 SLLQ-FLIPIFSFIILC---VV-----TDCTSI  455 (456)
Q Consensus       432 ~~~~-~fgPv~~vv~~~---~~-----~eai~~  455 (456)
                      ++.+ +||||++|+.|+   |.     +|||++
T Consensus       399 i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~  431 (534)
T 2y53_A          399 LHDVEVFGPVASVAPYRVTTDTNALPEAHAVAL  431 (534)
T ss_dssp             TTTCCCSSSEEEEEEECCCCC---CTTHHHHHH
T ss_pred             HHhCCCcCCEEEEEEECCCCCcccCCHHHHHHH
Confidence            6665 999999999999   99     999875

>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*

Probab=100.00  E-value=8.9e-75  Score=599.65  Aligned_cols=369  Identities=25%  Similarity=0.332  Sum_probs=327.2

Q ss_pred             CCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCh
Q 012806           72 GKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPY  151 (456)
Q Consensus        72 ~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~  151 (456)
                      -..+++.||.||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|+++.++|++++++|+|||.
T Consensus         5 ~~~~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~   82 (457)
T 3lns_A            5 HHHHHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFA--TRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPK   82 (457)
T ss_dssp             ------------------CCCCHHHHHHHHHHHHHHHH--TTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCH
T ss_pred             cccccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH
Confidence            34678999999999999999999999999999999999  9999999999999999999999999999999999999999


Q ss_pred             hhhhhccHHHHHHHHHHHHHhhhHhcCcc-cCC---CCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEE
Q 012806          152 VQSLKSEVPMVVRLLHYYAGWADKIHGLT-VPG---DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIV  227 (456)
Q Consensus       152 ~~a~~~ev~~~~~~l~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vv  227 (456)
                      .+++..|+..+++.++|+++...+..... ...   ..+...++.++|+|||++|+|||||+.+.++++++||++||+||
T Consensus        83 ~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VV  162 (457)
T 3lns_A           83 DVVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCI  162 (457)
T ss_dssp             HHHHHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEE
Confidence            99875699999999999999887765432 221   12456789999999999999999999999999999999999999


Q ss_pred             EecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecC
Q 012806          228 LKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELG  307 (456)
Q Consensus       228 lKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelg  307 (456)
                      +|||+.+|+++..+++++.++ +|+|++|+|+| +.+.+..|++ +++|+|+||||+.+|+.|++.+++ ++||+++|+|
T Consensus       163 lKps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g-~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~~~aa~-~l~pv~lElG  238 (457)
T 3lns_A          163 IKPSETTPETSAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAAK-HLTPVVLELG  238 (457)
T ss_dssp             EECCTTCHHHHHHHHHHHHHH-CCTTTEEECCC-CHHHHHHHTT-SCCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECC
T ss_pred             EECCCCChHHHHHHHHHHHHh-CCHhhEEEecC-CHHHHHHHhc-CCCCEEEEECCHHHHHHHHHHHhh-ccCceEEECC
Confidence            999999999999999999999 99999999999 7788899998 789999999999999999999988 8999999999


Q ss_pred             CCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHH
Q 012806          308 GKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQF  387 (456)
Q Consensus       308 G~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~  387 (456)
                      ||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++   |.++  ++||+++++++
T Consensus       239 Gk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~  313 (457)
T 3lns_A          239 GKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTERQV  313 (457)
T ss_dssp             CCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSHHHH
T ss_pred             CCCCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCHHHH
Confidence            999999999999999999999999999999999999999999999999999999999987   7766  99999999999


Q ss_pred             HHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          388 QKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       388 ~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      +++.++|+++   ++++++||... ..|+|++|||+.+++++|+.+.+ +||||++|+.++|.+|||++
T Consensus       314 ~rv~~~i~~a---~~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~  378 (457)
T 3lns_A          314 QRLVSLLEAT---QGQVLVGSQAD-VSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQ  378 (457)
T ss_dssp             HHHHHHHHHC---CSEEEECCCEE-GGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHH
T ss_pred             HHHHHHHHhc---CCeEEeCCccC-CCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHH
Confidence            9999999986   35999999753 36899999999999999977765 99999999999999999975

>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}

Probab=100.00  E-value=4.8e-75  Score=611.48  Aligned_cols=380  Identities=22%  Similarity=0.280  Sum_probs=343.4

Q ss_pred             CCccCceeCCEEeeCCCCCeeeeecCCCCceEE-EEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 012806           55 ISYTKNLINGQFVDAASGKTFPVYDPRTAEVIA-NVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIE  133 (456)
Q Consensus        55 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~-~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~  133 (456)
                      +...++||||+|+.+.+     ++||.||++++ +++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|+
T Consensus        27 ~~~~~~~I~G~~~~~~~-----v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~   99 (528)
T 3v4c_A           27 TPKGKHLVAGEWLDGAG-----TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFW--TYGYSSRKERAAFLRAIADEIE   99 (528)
T ss_dssp             CCCCCEEETTEEECCSS-----EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHH
T ss_pred             ccccCceECCEEecCCC-----ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHH
Confidence            34458999999986432     89999999998 9999999999999999999999  8999999999999999999999


Q ss_pred             HhHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHh--cCccc----CC---CCCcceEEEeeccceEEEEcc
Q 012806          134 KNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKI--HGLTV----PG---DGNYHIQTLHEPIGVAGQIVP  204 (456)
Q Consensus       134 ~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~--~~~~~----~~---~~~~~~~~~~~P~Gvv~~i~p  204 (456)
                      ++.++|++++++|+|||..+++ .|+..+++.++||++.+++.  .+...    +.   ..+...++.++|+|||++|+|
T Consensus       100 ~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P  178 (528)
T 3v4c_A          100 ARAEAITEIGSQETGLPEARLN-GERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGA  178 (528)
T ss_dssp             HTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECC
T ss_pred             HhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECC
Confidence            9999999999999999999987 69999999999999988772  22221    11   122346889999999999999


Q ss_pred             CCchHHHHH--hHHHHHhhcCCEEEEecCCCchHHHHHHHHHH----HHcCCCCCcEEEEeCCchhhHHHHhcCCCccEE
Q 012806          205 WNFPLLLFT--WKVAPALTCGNTIVLKSAEQTPLTALYVAKLF----HEAGLPPGVLNVVSGYGPTAGAALASHMDVDKL  278 (456)
Q Consensus       205 ~N~P~~~~~--~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll----~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v  278 (456)
                      ||||+.+.+  +++++||++||+||+|||+.+|+++..+++++    .++|+|+|++|+|+|.+.+.++.|+.|++||+|
T Consensus       179 wN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V  258 (528)
T 3v4c_A          179 SNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAV  258 (528)
T ss_dssp             SSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEE
T ss_pred             CcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEE
Confidence            999999865  99999999999999999999999999999875    468999999999999888899999999999999


Q ss_pred             EEecChhHHHHHHHHHhhCCC--ccEEEecCCCCceEEcCCC---CHHHHHHHHHHHhhhcCCCccccCcccccccc-cH
Q 012806          279 SFTGHCDTGKIVQELAAKSNL--KPVTLELGGKSPFIIFDDA---DVDQAVELAHFALFYNQGQCCCAGSRTYVHER-VY  352 (456)
Q Consensus       279 ~ftGs~~~g~~i~~~~a~~~~--~~v~lelgG~~~~iV~~da---D~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~-v~  352 (456)
                      +||||+.+|+.|.+.+++ ++  ||+++|+|||||+||++||   |++.|++.+++++|.|+||.|++++|||||++ +|
T Consensus       259 ~fTGS~~~G~~i~~~aa~-~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~  337 (528)
T 3v4c_A          259 GFTGSLAGGRALFDLCAA-RPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADA  337 (528)
T ss_dssp             EEESCHHHHHHHHHHHHH-SSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHH
T ss_pred             EEECChHHHHHHHHHHhh-ccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccHH
Confidence            999999999999999998 78  9999999999999999999   88999999999999999999999999999997 99


Q ss_pred             HHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCC---
Q 012806          353 DEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVS---  429 (456)
Q Consensus       353 ~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~---  429 (456)
                      |+|+++|++++++++.      ++.+||++++.+.+++.++++   ++|+++++||..   .|+|++|||+.+++++   
T Consensus       338 d~f~~~l~~~~~~~~~------~~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~---~g~~~~PTvl~~~~~~~~~  405 (528)
T 3v4c_A          338 DRFTTAAVEALAKVAP------QTMLTDGIAKAYRDGQARFAT---RNAVKPLLATES---SGRDASPNLFETTGAQFLA  405 (528)
T ss_dssp             HHHHHHHHHHHHTCCC------EECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC---CTTEECCEEEEEEHHHHHH
T ss_pred             HHHHHHHHHHHHhccc------CCCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc---CCceeccEEEEecCccccc
Confidence            9999999999998764      367899999888888877763   479999999975   6999999999988887   


Q ss_pred             hHhhhc-cccceEEeEEEccccccccc
Q 012806          430 FISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       430 ~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      |+++.+ +||||++|+.|++.+|||++
T Consensus       406 ~~i~~eEiFGPVl~V~~~~~~deAi~~  432 (528)
T 3v4c_A          406 DHALGEEVFGPLGLVVRVGSPAEMEEL  432 (528)
T ss_dssp             CGGGGCCCSSSEEEEEEESSHHHHHHH
T ss_pred             ChhhcccccCCeEEEEecCCHHHHHHH
Confidence            666665 99999999999999999875

>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*

Probab=100.00  E-value=8.9e-74  Score=599.46  Aligned_cols=369  Identities=18%  Similarity=0.251  Sum_probs=337.4

Q ss_pred             CCCCCeeeeecCCCCceE-EEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhc
Q 012806           69 AASGKTFPVYDPRTAEVI-ANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNN  147 (456)
Q Consensus        69 ~~~~~~~~v~~P~tge~i-~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~  147 (456)
                      +.++++++++||.||+++ ++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|++++++|++++++|+
T Consensus         3 ~~~~~~~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~   80 (510)
T 1ez0_A            3 PQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVAR--DFRRLNNSKRASLLRTIASELEARSDDIIARAHLET   80 (510)
T ss_dssp             --CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCCCCeEEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence            456789999999999999 79999999999999999999999  899999999999999999999999999999999999


Q ss_pred             CCChhhhhhccHHHHHHHHHHHHHhhhH--hcCccc----CC--CCC-cceEEEeeccceEEEEccCCchHHHH--HhHH
Q 012806          148 GKPYVQSLKSEVPMVVRLLHYYAGWADK--IHGLTV----PG--DGN-YHIQTLHEPIGVAGQIVPWNFPLLLF--TWKV  216 (456)
Q Consensus       148 Gk~~~~a~~~ev~~~~~~l~~~~~~~~~--~~~~~~----~~--~~~-~~~~~~~~P~Gvv~~i~p~N~P~~~~--~~~~  216 (456)
                      |||..+++ .|+..+++.++||++.+++  ..+...    +.  +.+ ...++.++|+|||++|+|||||+.+.  .+++
T Consensus        81 Gk~~~~a~-~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~  159 (510)
T 1ez0_A           81 ALPEVRLT-GEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDT  159 (510)
T ss_dssp             CCCHHHHH-HHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHH
T ss_pred             CCCHHHHH-HHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHH
Confidence            99998886 6999999999999998875  433322    11  112 23578999999999999999999985  4999


Q ss_pred             HHHhhcCCEEEEecCCCchHHHHHHHHHH----HHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHH
Q 012806          217 APALTCGNTIVLKSAEQTPLTALYVAKLF----HEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE  292 (456)
Q Consensus       217 ~~ALaaGN~vvlKps~~~p~~~~~l~~ll----~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~  292 (456)
                      ++||++||+||+|||+.+|+++..+++++    .++|+|+|++|+|+|.+.+.+..|..|++||+|+||||+.+|+.|++
T Consensus       160 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~  239 (510)
T 1ez0_A          160 ASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFN  239 (510)
T ss_dssp             HHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred             HHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHH
Confidence            99999999999999999999999999998    56799999999999988889999999999999999999999999999


Q ss_pred             HHhhCCC--ccEEEecCCCCceEEcCCCCHH--HHHHHHHHHhhhcCCCccccCcccccccc-cHHHHHHHHHHHHhhhh
Q 012806          293 LAAKSNL--KPVTLELGGKSPFIIFDDADVD--QAVELAHFALFYNQGQCCCAGSRTYVHER-VYDEFVEKAKARAMRRI  367 (456)
Q Consensus       293 ~~a~~~~--~~v~lelgG~~~~iV~~daD~d--~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~-v~~~f~~~l~~~~~~~~  367 (456)
                      .+++ ++  ||+++|+|||||+||++|||+|  .|++.+++++|.|+||.|++++|||||++ +||+|+++|++++++++
T Consensus       240 ~aa~-~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~  318 (510)
T 1ez0_A          240 LAHE-RPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQS  318 (510)
T ss_dssp             HHHH-SSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCC
T ss_pred             Hhhc-cCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcC
Confidence            9988 65  9999999999999999999999  99999999999999999999999999999 99999999999999877


Q ss_pred             cCCCCCCCCccCCCCCHHHHHHHHHHHHHHHH-cCCeEEeCCcccCCCCceEecEEEecCCCC---hHhhhc-cccceEE
Q 012806          368 VGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIE-SNATLECGGDRLGNRGYFVQPTVFSDVTVS---FISLLQ-FLIPIFS  442 (456)
Q Consensus       368 ~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~-~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~---~~~~~~-~fgPv~~  442 (456)
                      +          ||++++.+.+++.++|+++++ +|+++++||.    .|+|++|||+.+++++   |+.+.+ +||||++
T Consensus       319 ~----------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~----~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~  384 (510)
T 1ez0_A          319 P----------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA----ESPCVASALFVTSSENWRKHPAWEEEIFGPQSL  384 (510)
T ss_dssp             C----------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC----CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEE
T ss_pred             C----------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC----CCCEecCEEEEecCCccccCHHHcCCccCCeEE
Confidence            3          688999999999999999984 7999999996    2899999999988777   867765 9999999


Q ss_pred             eEEEccccccccc
Q 012806          443 FIILCVVTDCTSI  455 (456)
Q Consensus       443 vv~~~~~~eai~~  455 (456)
                      |+.|+|.+|+|++
T Consensus       385 v~~~~~~deai~~  397 (510)
T 1ez0_A          385 IVVCENVADMLSL  397 (510)
T ss_dssp             EEEESSHHHHHHH
T ss_pred             EEEeCCHHHHHHH
Confidence            9999999999875

>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*

Probab=100.00  E-value=8e-73  Score=585.70  Aligned_cols=351  Identities=25%  Similarity=0.353  Sum_probs=320.8

Q ss_pred             CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHH
Q 012806           92 GDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAG  171 (456)
Q Consensus        92 ~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~  171 (456)
                      .+.+|+++++++|++||+  .|+.++..+|.++|+++++.|+++.++|++++++|+|||..+++..|+..++..++|++.
T Consensus        15 ~s~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~   92 (469)
T 3sza_A           15 SHMSKISEAVKRARAAFS--SGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQ   92 (469)
T ss_dssp             ---CHHHHHHHHHHHHHH--TTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            467799999999999999  899999999999999999999999999999999999999999876799999999998887


Q ss_pred             hhhHhcCccc----CCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHH
Q 012806          172 WADKIHGLTV----PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHE  247 (456)
Q Consensus       172 ~~~~~~~~~~----~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~  247 (456)
                      ...+......    ....+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..+++++.+
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~  172 (469)
T 3sza_A           93 KLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQ  172 (469)
T ss_dssp             HHHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             HHHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHH
Confidence            6655432211    111234678999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHH
Q 012806          248 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELA  327 (456)
Q Consensus       248 aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i  327 (456)
                      + +|+|++|+|+|++ +.+..|+.| ++|+|+||||+.+|+.|++.+++ ++||+++|+|||+|+||++|||+|.|++.+
T Consensus       173 a-lP~gvv~vv~g~~-~~~~~ll~~-~vd~I~FTGS~~vG~~i~~~aa~-~lkpv~lELGGk~p~iV~~dADl~~Aa~~i  248 (469)
T 3sza_A          173 Y-LDKDLYPVINGGV-PETTELLKE-RFDHILYTGSTGVGKIIMTAAAK-HLTPVTLELGGKSPCYVDKNCDLDVACRRI  248 (469)
T ss_dssp             H-SCTTTSCBCCCSH-HHHHHHTTS-CCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCCCCEEEECTTSCHHHHHHHH
T ss_pred             h-CCcceEEEEECCH-HHHHHHHhc-CCCEEEEECCHHHHHHHHHHHhh-ccCceEEecCCCCceEECCCCCHHHHHHHH
Confidence            8 9999999999954 445567777 89999999999999999999998 899999999999999999999999999999


Q ss_pred             HHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeC
Q 012806          328 HFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECG  407 (456)
Q Consensus       328 ~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~g  407 (456)
                      ++++|.|+||.|++++|||||+++||+|+++|+++++++ +|+|.++++++||++++++++++.++|     +|+++++|
T Consensus       249 ~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~G  322 (469)
T 3sza_A          249 AWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYG  322 (469)
T ss_dssp             HHHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEEC
T ss_pred             HHHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEeC
Confidence            999999999999999999999999999999999999988 599999999999999999999999998     69999999


Q ss_pred             CcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          408 GDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       408 g~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      |... ..|+|++|||+.+++++|+++.| +||||++|+.+++.+|||++
T Consensus       323 G~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~  370 (469)
T 3sza_A          323 GTGD-AATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQF  370 (469)
T ss_dssp             CCEE-TTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHH
T ss_pred             CccC-CCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHH
Confidence            9864 46999999999999999977775 99999999999999999975

>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}

Probab=100.00  E-value=1.8e-70  Score=606.12  Aligned_cols=358  Identities=30%  Similarity=0.416  Sum_probs=335.7

Q ss_pred             EecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHH
Q 012806           89 VAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHY  168 (456)
Q Consensus        89 v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~  168 (456)
                      ++.++.+|++.++++|++||+  .|+.++..+|.++|+++++.|+++.++|++++++|+|||..++. .|+..++++++|
T Consensus       544 v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~-~Ev~~ai~~lr~  620 (1001)
T 3haz_A          544 IADATPDQAHAAVAAARAGFA--GWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDAL-SELREAADFCRY  620 (1001)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHH-HHHHHHHHHHHH
T ss_pred             cccCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHH-HHHHHHHHHHHH
Confidence            889999999999999999999  89999999999999999999999999999999999999999997 699999999999


Q ss_pred             HHHhhhHhcCcc--cCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHH
Q 012806          169 YAGWADKIHGLT--VPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFH  246 (456)
Q Consensus       169 ~~~~~~~~~~~~--~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~  246 (456)
                      |+...++..+..  .+...+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..++++++
T Consensus       621 ~a~~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~  700 (1001)
T 3haz_A          621 YAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLH  700 (1001)
T ss_dssp             HHHHHHHHHSSCEECCCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             HHHHHHhhcCccccccCCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHH
Confidence            999998877654  333446678899999999999999999999999999999999999999999999999999999999


Q ss_pred             HcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhC--CCccEEEecCCCCceEEcCCCCHHHHH
Q 012806          247 EAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKS--NLKPVTLELGGKSPFIIFDDADVDQAV  324 (456)
Q Consensus       247 ~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~--~~~~v~lelgG~~~~iV~~daD~d~aa  324 (456)
                      ++|+|+|++|+|+|++.+ +..|+.||+|++|+||||+.+|+.|.+.++++  +++|+++|+|||||+||++|||+|.|+
T Consensus       701 eAGlP~gvv~vV~G~g~~-g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa  779 (1001)
T 3haz_A          701 EAGIPKSALYLVTGDGRI-GAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVA  779 (1001)
T ss_dssp             HHTCCTTTEEECCCCHHH-HHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHH
T ss_pred             HhCcCcCcEEEEecCchH-HHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHH
Confidence            999999999999998877 99999999999999999999999999998863  489999999999999999999999999


Q ss_pred             HHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeE
Q 012806          325 ELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATL  404 (456)
Q Consensus       325 ~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v  404 (456)
                      +.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++++++| ++
T Consensus       780 ~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~v  858 (1001)
T 3haz_A          780 DDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL  858 (1001)
T ss_dssp             HHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE
T ss_pred             HHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC-eE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999988 88


Q ss_pred             EeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEcc--ccccccc
Q 012806          405 ECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCV--VTDCTSI  455 (456)
Q Consensus       405 ~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~--~~eai~~  455 (456)
                       +||... +.|+|++|||+.+  ++|+.+.+ +||||++|+.|++  .+|+|++
T Consensus       859 -~gg~~~-~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~  908 (1001)
T 3haz_A          859 -HFAGPA-PEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRA  908 (1001)
T ss_dssp             -EEECCC-CSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHH
T ss_pred             -eccccC-CCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHH
Confidence             888753 4599999999974  66756664 9999999999997  5888864

>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}

Probab=100.00  E-value=4.3e-65  Score=526.50  Aligned_cols=341  Identities=20%  Similarity=0.228  Sum_probs=295.2

Q ss_pred             EecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhccHHHHHHHH-H
Q 012806           89 VAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLL-H  167 (456)
Q Consensus        89 v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l-~  167 (456)
                      ++.++.+|+++++++|++||+  .|+.++.++|.++|+++++.|++++++|++++++|+|||..+++..|+..+.+.+ +
T Consensus         1 ~~~a~~~~v~~av~~A~~A~~--~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~   78 (452)
T 3my7_A            1 MPVTNMAELDAMIARVKKAQE--EFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYN   78 (452)
T ss_dssp             -CCSSHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence            467899999999999999999  8999999999999999999999999999999999999999998755777777766 4


Q ss_pred             HHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHH-
Q 012806          168 YYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFH-  246 (456)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~-  246 (456)
                      ++...  +..+ ..+.+.+...+..++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..++++++ 
T Consensus        79 ~~~~~--~~~g-~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~  155 (452)
T 3my7_A           79 KYKDE--QTCG-ILEEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLD  155 (452)
T ss_dssp             HHTTC--CCSE-EC-------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred             Hhhhc--cccc-cccCCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHH
Confidence            44321  1111 1222334557889999999999999999999999999999999999999999999999999888876 


Q ss_pred             ---HcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEEcCCCCHHHH
Q 012806          247 ---EAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQA  323 (456)
Q Consensus       247 ---~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~~daD~d~a  323 (456)
                         ++|+|+|++++|+|++.+.++.|+.||+|++|+||||+.+++    .++. ++||+++|+|||+|+||++|||++.|
T Consensus       156 a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~~----~a~~-~~kp~~~e~gG~~p~iV~~dADl~~A  230 (452)
T 3my7_A          156 AAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVK----AAYS-SGKPAIGVGAGNVPVVIDETADIKRA  230 (452)
T ss_dssp             HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHHH----HHHT-SSSCEEECC--CEEEEECTTSCHHHH
T ss_pred             HHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHHH----HHHh-cCCCEEecCCCCCeEEEeCCCCHHHH
Confidence               789999999999998889999999999999999999998654    4454 78999999999999999999999999


Q ss_pred             HHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCe
Q 012806          324 VELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNAT  403 (456)
Q Consensus       324 a~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~  403 (456)
                      ++.+++++|+|+||.|++++|||||+++||+|+++|+++               .||++++++++++.++|+.+...|++
T Consensus       231 a~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a~  295 (452)
T 3my7_A          231 VASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNAK  295 (452)
T ss_dssp             HHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECGG
T ss_pred             HHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCCe
Confidence            999999999999999999999999999999999999875               38999999999999999877667878


Q ss_pred             EEeCCccc---CCCCceEecEE-------EecCCCChHhhhccccceEEeEEEccccccccc
Q 012806          404 LECGGDRL---GNRGYFVQPTV-------FSDVTVSFISLLQFLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       404 v~~gg~~~---~~~g~~i~PtV-------l~~v~~~~~~~~~~fgPv~~vv~~~~~~eai~~  455 (456)
                      + +||...   ...|+|++||+       +.+++++++...|+||||++|+.++|.+|||++
T Consensus       296 v-~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~E~FgPVl~v~~~~~~~eAi~~  356 (452)
T 3my7_A          296 I-VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAHEKLSPTLGMFRADNFEDAVAQ  356 (452)
T ss_dssp             G-TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGSCCSSSEEEEEEESSHHHHHHH
T ss_pred             E-ecCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhcCccCcEEEEEEeCCHHHHHHH
Confidence            6 477532   13589999997       668999996555799999999999999999975

>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}

Probab=100.00  E-value=8.6e-65  Score=525.91  Aligned_cols=343  Identities=17%  Similarity=0.208  Sum_probs=300.6

Q ss_pred             EEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhccHHHHHHHHH
Q 012806           88 NVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLH  167 (456)
Q Consensus        88 ~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~  167 (456)
                      .++.++.+|+++++++|++||+  .|+.++.++|.++|+++++.|.++.++|++++++|+||+..+++..+...+++.+.
T Consensus         5 ~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~   82 (464)
T 3k9d_A            5 DKDLRSIQEVRNLIESANKAQK--ELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVY   82 (464)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH
T ss_pred             ccCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHH
Confidence            3456678999999999999999  89999999999999999999999999999999999999998876445555555554


Q ss_pred             HHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHH----
Q 012806          168 YYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAK----  243 (456)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~----  243 (456)
                      ++....+ ..+. ...+.+...+..++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++    
T Consensus        83 ~~~~~~~-~~g~-~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~  160 (464)
T 3k9d_A           83 NYIKDMK-TIGM-LKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISE  160 (464)
T ss_dssp             HHHTTCC-CSEE-EEEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred             Hhhhccc-ccce-eccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHH
Confidence            4433221 1111 122345678899999999999999999999999999999999999999999999999998665    


Q ss_pred             HHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecC-CCCceEEcCCCCHHH
Q 012806          244 LFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELG-GKSPFIIFDDADVDQ  322 (456)
Q Consensus       244 ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelg-G~~~~iV~~daD~d~  322 (456)
                      ++.++|+|+|++++|+|.+.+.++.|+.|++||+|+||||+.+    .+.+++ ++||+ +|+| ||+|+||++|||++.
T Consensus       161 ~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~~-~~kpv-lelG~G~~p~iV~~dADl~~  234 (464)
T 3k9d_A          161 AAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM----VKAAYS-SGTPA-IGVGPGNGPAFIERSANIPR  234 (464)
T ss_dssp             HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH----HHHHTT-SSSCE-EEBCCCCCEEEECTTSCHHH
T ss_pred             HHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH----HHHHHh-cCCcE-EeeCCCCCeEEECCCCCHHH
Confidence            4688999999999999988899999999999999999999874    445555 88999 7777 999999999999999


Q ss_pred             HHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHH-------hhhhcCCCC-CCCCccCCCCCHHHHHHHHHHH
Q 012806          323 AVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARA-------MRRIVGDPF-KSGVEQGPQIDPEQFQKVLRYI  394 (456)
Q Consensus       323 aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~-------~~~~~g~p~-~~~~~~Gpli~~~~~~~v~~~i  394 (456)
                      |++.+++++|+|+||.|++++|||||+++||+|+++|+++.       +.+++|+|. ++++++||+++.++++++.+++
T Consensus       235 Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~  314 (464)
T 3k9d_A          235 AVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLA  314 (464)
T ss_dssp             HHHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHT
T ss_pred             HHHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999985       567899998 7889999999999999999999


Q ss_pred             HHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhccccceEEeEEEcccccccc
Q 012806          395 RSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQFLIPIFSFIILCVVTDCTS  454 (456)
Q Consensus       395 ~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~~fgPv~~vv~~~~~~eai~  454 (456)
                      +.++.+|+++++||..              +++++|+...|+||||++|+.++|.+|||+
T Consensus       315 ~~a~~~ga~vl~gg~~--------------~v~~~~~~~~E~fgPVl~v~~~~~~~eAi~  360 (464)
T 3k9d_A          315 GLTVPADARVLIAEET--------------KVGAKIPYSREKLAPILAFYTAETWQEACE  360 (464)
T ss_dssp             TCCCCTTCCEEEEECC--------------CCSTTCGGGSCCCSSEEEEEEESSHHHHHH
T ss_pred             hhhhcCCCEEEEcCCC--------------CCCCCCcccccccCceEEEEEeCCHHHHHH
Confidence            9999999999999853              678888544459999999999999999973

>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}

Probab=100.00  E-value=2.7e-63  Score=513.16  Aligned_cols=328  Identities=18%  Similarity=0.144  Sum_probs=262.3

Q ss_pred             eeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhc-------
Q 012806           75 FPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNN-------  147 (456)
Q Consensus        75 ~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~-------  147 (456)
                      --++||.||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|+++.++|++++++|+       
T Consensus         9 ~~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~   86 (463)
T 2h5g_A            9 SGVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGR--MLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRL   86 (463)
T ss_dssp             --------------------CCHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTS
T ss_pred             CCCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccC
Confidence            35789999999999999999999999999999999  899999999999999999999999999999999999       


Q ss_pred             CCChh----hhhhccHHHHHHHHHHHHHhhhHhcCcccCCC---CCcceEEEeeccceEEEEccCCchHHHHHhHHHHHh
Q 012806          148 GKPYV----QSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD---GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPAL  220 (456)
Q Consensus       148 Gk~~~----~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL  220 (456)
                      |||..    ++. .|+..+++.++||++++++..+...+..   .+...++.++|+|||++|+||| |...+ +++++||
T Consensus        87 Gk~~~~rl~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~AL  163 (463)
T 2h5g_A           87 AAPLLKRLSLST-SKLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAI  163 (463)
T ss_dssp             CHHHHHTTCCCH-HHHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHH
T ss_pred             CCchhhhhhhhH-HHHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHH
Confidence            79987    455 6999999999999988877766653321   3445688999999999999887 87777 8999999


Q ss_pred             hcCCEEEEecCCCchHHHHHHHHHHHHc----CCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhh
Q 012806          221 TCGNTIVLKSAEQTPLTALYVAKLFHEA----GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK  296 (456)
Q Consensus       221 aaGN~vvlKps~~~p~~~~~l~~ll~~a----GlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~  296 (456)
                      ++||+||+|||+.+|+++..|+++++++    | |+|++|+|+| +.++++.|..|++||+|+||||+.+|+.|++.++ 
T Consensus       164 aaGN~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa-  240 (463)
T 2h5g_A          164 ASGNGLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNT-REEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK-  240 (463)
T ss_dssp             HHTCEEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCT-TCCC-------CCCSEEEEESCHHHHHHHHHHCS-
T ss_pred             HcCCEEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcC-CHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC-
Confidence            9999999999999999999999999999    9 9999999999 7788999999999999999999999999998876 


Q ss_pred             CCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCC
Q 012806          297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGV  376 (456)
Q Consensus       297 ~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~  376 (456)
                        +||+++|+|||+|+||++|||+|.|++.+++++|.| ||.|++++|||||+++||                       
T Consensus       241 --l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d-----------------------  294 (463)
T 2h5g_A          241 --GIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR-----------------------  294 (463)
T ss_dssp             --SSCBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT-----------------------
T ss_pred             --CCCEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc-----------------------
Confidence              799999999999999999999999999999999999 999999999999999998                       


Q ss_pred             ccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          377 EQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       377 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                        ||+     +   .+++++++++|++++.|+.. ...|+|+        +++|+++.+ +||||++|+.|+|.+|||++
T Consensus       295 --~p~-----~---~~~i~~~~~~Ga~v~~G~~~-~~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~  355 (463)
T 2h5g_A          295 --TPL-----F---DQIIDMLRVEQVKIHAGPKF-ASYLTFS--------PSEVKSLRTEYGDLELCIEVVDNVQDAIDH  355 (463)
T ss_dssp             --SHH-----H---HHHHHHHHHTTCEEEECHHH-HC-----------------CCSSCCCCSSEEEEEEESSHHHHHHH
T ss_pred             --hHH-----H---HHHHHHHHhCCCEEEeCCcc-cccCccC--------CCCchHHhccccCceEEEEEeCCHHHHHHH
Confidence              333     2   34588888999999855432 2235553        567866665 99999999999999999975

>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1

Probab=100.00  E-value=9.6e-62  Score=502.25  Aligned_cols=320  Identities=15%  Similarity=0.128  Sum_probs=272.6

Q ss_pred             HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCh----hhhhhccHHH-HHHHHHHH
Q 012806           95 EDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPY----VQSLKSEVPM-VVRLLHYY  169 (456)
Q Consensus        95 ~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~~~ev~~-~~~~l~~~  169 (456)
                      ..+++++++|++||+  .|+.++..+|.++|+++++.|+++.++|++++++|+|||.    .++...|+.. ++..++|+
T Consensus        14 ~~~~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~   91 (468)
T 1vlu_A           14 SSSQQIAKNARKAGN--ILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVM   91 (468)
T ss_dssp             CHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHH
T ss_pred             hhHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHH
Confidence            357899999999999  8999999999999999999999999999999999999998    7775468888 89999999


Q ss_pred             HHhhhHhc------CcccCC---CCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHH
Q 012806          170 AGWADKIH------GLTVPG---DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALY  240 (456)
Q Consensus       170 ~~~~~~~~------~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~  240 (456)
                      ++..++..      +...+.   +.+...++.++|+|||++|+||| | .+.++++++||++||+||+|||+.+|+++..
T Consensus        92 a~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~  169 (468)
T 1vlu_A           92 LQGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFRE  169 (468)
T ss_dssp             HHHHHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHH
T ss_pred             HHHHHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHH
Confidence            98887765      443221   12445688999999999999999 9 9999999999999999999999999999999


Q ss_pred             HHHHHH----H----cCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCce
Q 012806          241 VAKLFH----E----AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPF  312 (456)
Q Consensus       241 l~~ll~----~----aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~  312 (456)
                      ++++++    +    +|+|+|++|+|+ ++.++++.|..|++||+|+||||+.+|+.|.+.+    +||+++|+|||+|+
T Consensus       170 l~~l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a----~kpv~lElGGk~p~  244 (468)
T 1vlu_A          170 MAKIVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT----KIPVLGHADGICSI  244 (468)
T ss_dssp             HHHHHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC----CSCBTTBCSCCEEE
T ss_pred             HHHHHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc----CCCEEeecCCccce
Confidence            999995    8    999999999999 6778899999999999999999999999998765    69999999999999


Q ss_pred             EEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhc---CCCCCCCCccCCCCCHHHHHH
Q 012806          313 IIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIV---GDPFKSGVEQGPQIDPEQFQK  389 (456)
Q Consensus       313 iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~---g~p~~~~~~~Gpli~~~~~~~  389 (456)
                      ||++|||+|.|++.+++++|.|+| .|++++|||||+++ |+|+++|+++++++++   |||.+                
T Consensus       245 iV~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~----------------  306 (468)
T 1vlu_A          245 YLDEDADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL----------------  306 (468)
T ss_dssp             EECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH----------------
T ss_pred             EECCCCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH----------------
Confidence            999999999999999999999999 99999999999999 9999999999999997   87643                


Q ss_pred             HHHH-HHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          390 VLRY-IRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       390 v~~~-i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                       .++ |++++    ++++||.     |  ++|||+  ++++|+.+.+ +||||++|+.++|.+|||++
T Consensus       307 -~~~~i~~a~----~~~~gG~-----g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~  360 (468)
T 1vlu_A          307 -KTAYFDKLN----ELGKLTE-----A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQH  360 (468)
T ss_dssp             -HHHHHHHHH----HHTCCCH-----H--HHTTBC---------------CCCCEEEECCSHHHHHHH
T ss_pred             -hcccccccc----eeeccCC-----C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHH
Confidence             345 66665    4677875     4  799997  7888977765 99999999999999999975

>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}

Probab=100.00  E-value=2.4e-58  Score=474.86  Aligned_cols=312  Identities=18%  Similarity=0.174  Sum_probs=259.7

Q ss_pred             HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChh----hhhh-------ccHHHH
Q 012806           94 AEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYV----QSLK-------SEVPMV  162 (456)
Q Consensus        94 ~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~----~a~~-------~ev~~~  162 (456)
                      .+|+++++++|++||+  .|+.++..+|.++|+++++.|+++.++|++++++|+||+..    +++.       .|+..+
T Consensus        25 ~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~  102 (444)
T 4ghk_A           25 DQYMTDVGRRARRASR--SIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTM  102 (444)
T ss_dssp             HHHHHHHHHHHHHHHH--HHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHH
T ss_pred             HHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHH
Confidence            5799999999999999  89999999999999999999999999999999999999853    4442       378899


Q ss_pred             HHHHHHHHHhhhHhcCcccCC---CCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHH
Q 012806          163 VRLLHYYAGWADKIHGLTVPG---DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL  239 (456)
Q Consensus       163 ~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~  239 (456)
                      ++.+++++++.+. .+...+.   ..+...++.++|+|||++|+||| | .+.++++++||++||+||+|||+.+|+++.
T Consensus       103 ~~~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~  179 (444)
T 4ghk_A          103 VEGLRQVATLPDP-IGEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNT  179 (444)
T ss_dssp             HHHHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHH
T ss_pred             HHHHHHHHhhccc-cCccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHH
Confidence            9999999988754 2333321   23556789999999999999998 8 588999999999999999999999999999


Q ss_pred             HHHHHH----HHcCCCCCcEEEEeCCch-hhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEE
Q 012806          240 YVAKLF----HEAGLPPGVLNVVSGYGP-TAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFII  314 (456)
Q Consensus       240 ~l~~ll----~~aGlP~g~v~vv~g~~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV  314 (456)
                      .+++++    .++|+|+|++|+|+|.+. +.++.|..|++||+|+||||+.+|+.+.+.+    +||+++|+|||+|+||
T Consensus       180 ~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a----~~pv~lELGGk~p~IV  255 (444)
T 4ghk_A          180 ALAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA----RVPMIKHLDGICHVYV  255 (444)
T ss_dssp             HHHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----CSCBCCCCCCCCEEEE
T ss_pred             HHHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC----CCCEEEEcCCcCeEEE
Confidence            999997    789999999999998665 5788898999999999999999999998764    6999999999999999


Q ss_pred             cCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhc---CCCCCCCCccCCCCCHHHHHHHH
Q 012806          315 FDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIV---GDPFKSGVEQGPQIDPEQFQKVL  391 (456)
Q Consensus       315 ~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~---g~p~~~~~~~Gpli~~~~~~~v~  391 (456)
                      ++|||+|.|++.+++++|.|+| .|++++|||||+++||+|+++|+++++++++   |||.+                 .
T Consensus       256 ~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~~-----------------~  317 (444)
T 4ghk_A          256 DDRASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDADA-----------------R  317 (444)
T ss_dssp             CTTCCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHHH-----------------H
T ss_pred             CCCCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHHH-----------------H
Confidence            9999999999999999999999 9999999999999999999999999999988   76531                 3


Q ss_pred             HHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          392 RYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       392 ~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      ++|+++. .              |      ++  ++++|+.+.+ +||||++|+.|+|.+|||++
T Consensus       318 ~~i~~a~-~--------------G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~  359 (444)
T 4ghk_A          318 AVLEAAG-V--------------G------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEH  359 (444)
T ss_dssp             HHHHHTT-C--------------C------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHH
T ss_pred             HHHHhcc-c--------------C------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHH
Confidence            5565542 1              2      12  3456766665 99999999999999999975

>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1

Probab=100.00  E-value=1.7e-58  Score=473.65  Aligned_cols=311  Identities=18%  Similarity=0.224  Sum_probs=270.6

Q ss_pred             CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCh----hhhhh-------ccHHH
Q 012806           93 DAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPY----VQSLK-------SEVPM  161 (456)
Q Consensus        93 ~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~~-------~ev~~  161 (456)
                      ..+++++++++|++||+  .|+.++..+|.++|+++++.|+++.++|++++++|+||+.    .++..       .|+..
T Consensus        12 ~~~~~~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~   89 (427)
T 1o20_A           12 HMDELLEKAKKVREAWD--VLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDE   89 (427)
T ss_dssp             --CHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHH
Confidence            45789999999999999  8999999999999999999999999999999999999985    45431       48999


Q ss_pred             HHHHHHHHHHhhhHhcCcccCC---CCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHH
Q 012806          162 VVRLLHYYAGWADKIHGLTVPG---DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA  238 (456)
Q Consensus       162 ~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~  238 (456)
                      +++.++||+++.++ .+...+.   +.+...++.++|+|||++|+|||  +.++++++++||++||+||+|||+.+|+++
T Consensus        90 ~~~~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~  166 (427)
T 1o20_A           90 MIKACETVIGLKDP-VGEVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSN  166 (427)
T ss_dssp             HHHHHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHH
T ss_pred             HHHHHHHHHhcccc-cCccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHH
Confidence            99999999988765 4443331   23445688999999999999886  478999999999999999999999999999


Q ss_pred             HHHHHHHH----HcCCCCCcEEEEeCC-chhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceE
Q 012806          239 LYVAKLFH----EAGLPPGVLNVVSGY-GPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFI  313 (456)
Q Consensus       239 ~~l~~ll~----~aGlP~g~v~vv~g~-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~i  313 (456)
                      ..+++++.    ++|+|+|++|+|+|. +.+.++.|..|++||+|+||||+.+|+.|++.+    +||+++|+|||||+|
T Consensus       167 ~~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a----~~~v~lELGGk~p~i  242 (427)
T 1o20_A          167 KAIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA----TVPVLETGVGNCHIF  242 (427)
T ss_dssp             HHHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----SSCBCCCCCCCEEEE
T ss_pred             HHHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc----CCCEEEecCCCceEE
Confidence            99999998    689999999999984 466889999999999999999999999998876    589999999999999


Q ss_pred             EcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHH
Q 012806          314 IFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRY  393 (456)
Q Consensus       314 V~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~  393 (456)
                      |++|||+|.|++.+++++|.|+| .|++++|||||+++||+|+++|++++++++++                        
T Consensus       243 V~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~------------------------  297 (427)
T 1o20_A          243 VDESADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE------------------------  297 (427)
T ss_dssp             ECTTSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE------------------------
T ss_pred             EeCCCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe------------------------
Confidence            99999999999999999999999 99999999999999999999999999987652                        


Q ss_pred             HHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          394 IRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       394 i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                                 +.||.+.  .+ |+ |||   ++++|+.+.+ +||||++|+.++|.+|||++
T Consensus       298 -----------~~gg~~~--~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~  342 (427)
T 1o20_A          298 -----------VRGCEKT--RE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVKNVDEAIEH  342 (427)
T ss_dssp             -----------EEECHHH--HH-HS-TTS---EECCGGGTTCCCCSSEEEEEEESSHHHHHHH
T ss_pred             -----------eecChhh--hh-hC-Ccc---cCCCcchhhcccccceEEEEEECCHHHHHHH
Confidence                       2244321  12 33 886   3456756665 99999999999999999975

>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}

Probab=90.58  E-value=14  Score=36.46  Aligned_cols=164  Identities=18%  Similarity=0.129  Sum_probs=95.2

Q ss_pred             CCcceEEEeeccceEEEEccCC-chH-HHHHhHHHHHhhcCCE-EEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 012806          185 GNYHIQTLHEPIGVAGQIVPWN-FPL-LLFTWKVAPALTCGNT-IVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGY  261 (456)
Q Consensus       185 ~~~~~~~~~~P~Gvv~~i~p~N-~P~-~~~~~~~~~ALaaGN~-vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~  261 (456)
                      .|......+.|+--|++-.|.- +|+ .+.+..++||-.+|+. +|+..++..-...-.+.-..+.+|..    .+..-.
T Consensus       119 ~G~~~g~~~~Pi~~VGlYVPGG~A~ypSsvLM~aiPAkVAGV~~Iv~~tPp~~G~i~p~iL~AA~l~Gv~----eIy~vG  194 (423)
T 4gic_A          119 DGTLLGQKITPLDRVGLYVPGGKAAYPSSVLMNAVPAKVAGVPELIMAVPAPRGELNALVLAAAYISGVD----RVFRIG  194 (423)
T ss_dssp             TSCEEEEEEEECSEEEEECCCSTTCCHHHHHHHHHHHHHHTCSEEEEECCCGGGCCCHHHHHHHHHHTCC----EEECCC
T ss_pred             CCCEEEEEEEEecceeEEeeCCCCchhhHHHHhhccHHHhCCCeEEEecCCCCCCccHHHHHHHHhcCCc----EEEEcC
Confidence            4556678889999999999943 332 3456678999999997 34433322222223344455667655    344433


Q ss_pred             chhhHHHHhc----CCCccEEEEecChhHHHHHHHHHhhCCCccEEEec-CCCCceEE--cCCCCHHHHHHHHHHHhhhc
Q 012806          262 GPTAGAALAS----HMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLEL-GGKSPFII--FDDADVDQAVELAHFALFYN  334 (456)
Q Consensus       262 ~~~~~~~L~~----~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lel-gG~~~~iV--~~daD~d~aa~~i~~~~~~~  334 (456)
                      |.+.-.+|.-    -+.||+|+=.|..-+...= ++..  +  .|-.++ -|.+=++|  ++.+|.+.++..++.-+=..
T Consensus       195 GAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AK-r~v~--g--~VgIDm~AGPSEilViAD~~a~p~~vAaDLlsQAEHd  269 (423)
T 4gic_A          195 GAQAVAALAYGTETVPRVDKIVGPGNIYVATAK-KLVF--G--QVGIDMVAGPSEILVISDGRTDPDWIAMDLFSQAEHD  269 (423)
T ss_dssp             HHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHH-HHHB--T--TBEECCCCCCCEEEEEECSCSCHHHHHHHHHHHHTTC
T ss_pred             ChhhhhhhccCCCcccceeEEecCCcHHHHHHH-HHhc--C--CcCcccccccceEEEEeCCCCCHHHHHHHHHHhhccC
Confidence            5555555543    5789999999976554321 1221  1  233332 35554444  44589999888877766554


Q ss_pred             CCCccccCcccccccccHHHHHHHHHHHHh
Q 012806          335 QGQCCCAGSRTYVHERVYDEFVEKAKARAM  364 (456)
Q Consensus       335 ~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~  364 (456)
                      ..    + +.++|..+  ++|.++..+.+.
T Consensus       270 ~~----a-~~iLvT~s--~~la~~V~~~i~  292 (423)
T 4gic_A          270 ED----A-QAILISPD--AAHLEAVQASIE  292 (423)
T ss_dssp             TT----C-EEEEEESC--HHHHHHHHHHHH
T ss_pred             CC----C-eEEEEeCc--HHHHHHHHHHHH
Confidence            32    2 23556555  444554444443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	456
d1o04a_	494	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	1e-143
d1bxsa_	494	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	1e-143
d1a4sa_	503	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	1e-119
d1wnda_	474	c.82.1.1 (A:) Putative betaine aldehyde dehydrogen	5e-99
d1euha_	474	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	3e-86
d1uzba_	516	c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen	4e-75
d1ky8a_	499	c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3	4e-66
d1ad3a_	446	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	5e-59
d1ez0a_	504	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	3e-34
d1o20a_	414	c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {	3e-32
d1vlua_	436	c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {	6e-14

>d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

 Score =  417 bits (1074), Expect = e-143
 Identities = 223/375 (59%), Positives = 275/375 (73%), Gaps = 1/375 (0%)

Query: 54  QISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGP- 112
           ++   +  IN ++ DA S KTFP  +P T EVI  VAEGD ED+D+AV  AR AF  G  
Sbjct: 10  EVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSP 69

Query: 113 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGW 172
           W +M    R R++ R ADLIE++   LAALET +NGKPYV S   ++ MV++ L YYAGW
Sbjct: 70  WRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGW 129

Query: 173 ADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAE 232
           ADK HG T+P DG++   T HEP+GV GQI+PWNFPLL+  WK+ PAL  GN +V+K AE
Sbjct: 130 ADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAE 189

Query: 233 QTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE 292
           QTPLTALYVA L  EAG PPGV+N+V G+GPTAGAA+ASH DVDK++FTG  + G+++Q 
Sbjct: 190 QTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQV 249

Query: 293 LAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVY 352
            A  SNLK VTLELGGKSP II  DAD+D AVE AHFALF+NQGQC CAGSRT+V E +Y
Sbjct: 250 AAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIY 309

Query: 353 DEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG 412
           DEFVE++ ARA  R+VG+PF S  EQGPQ+D  QF+K+L YI +G +  A L CGG    
Sbjct: 310 DEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAA 369

Query: 413 NRGYFVQPTVFSDVT 427
           +RGYF+QPTVF DV 
Sbjct: 370 DRGYFIQPTVFGDVQ 384

>d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Sheep (Ovis aries) [TaxId: 9940]

 Score =  417 bits (1072), Expect = e-143
 Identities = 210/375 (56%), Positives = 271/375 (72%), Gaps = 1/375 (0%)

Query: 54  QISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGP- 112
           Q  YTK  IN ++  + SGK FPV++P T E +  V EGD ED+D+AV  AR+AF  G  
Sbjct: 10  QFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSP 69

Query: 113 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGW 172
           W  M   ER R++ + ADLIE++   LA +E  N GK +  +   ++   ++ L Y AGW
Sbjct: 70  WRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGW 129

Query: 173 ADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAE 232
           ADKI G T+P DGN+   T  EP+GV GQI+PWNFPLL+F WK+ PAL+CGNT+V+K AE
Sbjct: 130 ADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAE 189

Query: 233 QTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE 292
           QTPLTAL++  L  EAG PPGV+N+V GYGPTAGAA++SHMDVDK++FTG  + GK+++E
Sbjct: 190 QTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKE 249

Query: 293 LAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVY 352
            A KSNLK V+LELGGKSP I+F DAD+D AVE AH  +FY+QGQCC A SR +V E +Y
Sbjct: 250 AAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIY 309

Query: 353 DEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG 412
           DEFV ++  RA + ++G+P   GV QGPQID EQ++K+L  I SG +  A LECGG   G
Sbjct: 310 DEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWG 369

Query: 413 NRGYFVQPTVFSDVT 427
           N+GYF+QPTVFSDVT
Sbjct: 370 NKGYFIQPTVFSDVT 384

>d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Baltic cod (Gadus callarias) [TaxId: 8053]

 Score =  355 bits (913), Expect = e-119
 Identities = 142/384 (36%), Positives = 211/384 (54%), Gaps = 12/384 (3%)

Query: 51  PPVQISYTKNLINGQFVDAASGKTF-PVYDPRTAEVIANVAEGDAEDIDRAVATARKAFD 109
             V ++   N   G+ + +  G T  PV++P T  V+  +    AE++D+AV +A+ A+ 
Sbjct: 13  GSVVVTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYL 72

Query: 110 EGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYY 169
           +  W KM   ERSR+ML AA +I +  + +A LE  NN    +   + ++    + + YY
Sbjct: 73  K--WSKMAGIERSRVMLEAARIIRERRDNIAKLEVINN-GKTITEAEYDIDAAWQCIEYY 129

Query: 170 AGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLK 229
           AG A  + G  +   G     T  EP+GV   I+ WN+P ++  WK APAL CGN +V K
Sbjct: 130 AGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFK 189

Query: 230 SAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKI 289
            +  TP+T + +A++FHEAG+P G++NVV G G   G+ L  H +V K+SFTG   TGK 
Sbjct: 190 PSPMTPVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKK 248

Query: 290 VQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHE 349
           V E++AK  +K VTLELGGKSP +IF D +++ AV  A  A F  QGQ C  G+R +V  
Sbjct: 249 VMEMSAK-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQR 307

Query: 350 RVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGD 409
            +  +F+E+   R    +VGDP  +    G  I   Q  KVL ++    +  A + CGG+
Sbjct: 308 EIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGE 367

Query: 410 RLG------NRGYFVQPTVFSDVT 427
            L         GYF+ P V  +  
Sbjct: 368 PLTPSDPKLKNGYFMSPCVLDNCR 391

>d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Putative betaine aldehyde dehydrogenase YdcW
species: Escherichia coli [TaxId: 562]

 Score =  302 bits (775), Expect = 5e-99
 Identities = 139/390 (35%), Positives = 203/390 (52%), Gaps = 8/390 (2%)

Query: 58  TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
            K LING+ V    G+  PVY+P T +V+  +AE  AE +D AV  A  AF E  W + T
Sbjct: 3   HKLLINGELVSG-EGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAE--WGQTT 59

Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
           P  R+  +L+ AD+IE+N +  A LE+ N GKP   +   E+P +V +  ++AG A  ++
Sbjct: 60  PKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLN 119

Query: 178 GLTVP-GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
           GL        +      +P+GV   I PWN+PL++  WK+APAL  GN +VLK +E TPL
Sbjct: 120 GLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPL 179

Query: 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
           TAL +A+L  +   P GV+N++ G G T G  L  H  V  +S TG   TG+ +      
Sbjct: 180 TALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIIS-HTA 237

Query: 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 356
           S++K   +ELGGK+P I+FDDAD++  VE      +YN GQ C A  R Y  + +YD  V
Sbjct: 238 SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLV 297

Query: 357 EKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNAT-LECGGDRLGNRG 415
           EK  A       G P     E GP       ++V + +     +    +  GG++    G
Sbjct: 298 EKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNG 357

Query: 416 YFVQPTVFSDVTVSF-ISLLQFLIPIFSFI 444
           Y+  PT+ +       I   +   P+ S  
Sbjct: 358 YYYAPTLLAGALQDDAIVQKEVFGPVVSVT 387

>d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Streptococcus mutans [TaxId: 1309]

 Score =  269 bits (689), Expect = 3e-86
 Identities = 104/374 (27%), Positives = 171/374 (45%), Gaps = 16/374 (4%)

Query: 59  KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
           KN +NG++    S     +Y+P +   + +V     E++D   A+A+KA     W  ++ 
Sbjct: 5   KNYVNGEWKL--SENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPA--WRALSY 60

Query: 119 YERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAG-----WA 173
            ER+  + + AD++ ++ E++ A+ +    K Y  ++   V     + +           
Sbjct: 61  IERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGE 120

Query: 174 DKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQ 233
               G               EP+G+   I P+N+P+ L   K+APAL  GN I  K   Q
Sbjct: 121 VLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQ 180

Query: 234 TPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQEL 293
             ++ L +A+ F EAGLP GV N ++G G   G  +  H  V+ ++FTG    G+ + ++
Sbjct: 181 GSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKM 240

Query: 294 AAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYD 353
           A    ++P+ LELGGK   I+ +DAD++   +      F   GQ C A  R  V E V D
Sbjct: 241 AG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVAD 297

Query: 354 EFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGN 413
           E VEK + + +   +G+P     +  P ID +    V   I    +  AT      R   
Sbjct: 298 ELVEKIREKVLALTIGNPEDD-ADITPLIDTKSADYVEGLINDANDKGATALTEIKR--- 353

Query: 414 RGYFVQPTVFSDVT 427
            G  + P +F  VT
Sbjct: 354 EGNLICPILFDKVT 367

>d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: 1-pyrroline-5-carboxylate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score =  242 bits (618), Expect = 4e-75
 Identities = 120/377 (31%), Positives = 187/377 (49%), Gaps = 15/377 (3%)

Query: 59  KNLINGQFVDAASGKTFPVYDPR-TAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
              I G++VD  + +     +P   +EV+   A+    + + A+  A KAF    W    
Sbjct: 39  PLYIGGEWVD--TKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKT--WKDWP 94

Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
             +RSR++L+AA L+ +   EL A   +  GK +V++  ++V   +  + YYA  A +  
Sbjct: 95  QEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEA-SADVAEAIDFIEYYARAALRYR 153

Query: 178 GLTV--PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTP 235
              V          ++ + P+G    I PWNFP+ +FT  +   +  GNT++ K AE   
Sbjct: 154 YPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAV 213

Query: 236 LTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA 295
           +    V ++FHEAG PPGV+N + G G   GA L  H  +  ++FTG  + G  + E A 
Sbjct: 214 VVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAG 273

Query: 296 K-----SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHER 350
           +     +  K   +E GGK+  I+ + AD D A E    + +  QGQ C A SR  + + 
Sbjct: 274 RLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQG 333

Query: 351 VYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDR 410
            Y+  +E+   RA R  VG P +   + GP +  EQ +KVL YI  G      +  GG R
Sbjct: 334 AYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLV-LGGKR 391

Query: 411 LGNRGYFVQPTVFSDVT 427
           L   GYF+ PTVF++V 
Sbjct: 392 LEGEGYFIAPTVFTEVP 408

>d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN
species: Archaeon Thermoproteus tenax [TaxId: 2271]

 Score =  218 bits (555), Expect = 4e-66
 Identities = 100/367 (27%), Positives = 155/367 (42%), Gaps = 13/367 (3%)

Query: 59  KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
            + + G++    SG+   V  P     IA V     E+++R +    K         M  
Sbjct: 18  PSYLAGEWGG--SGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWS-ARDMPG 74

Query: 119 YERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG 178
            ER  ++ +AAD+IE+N++  A +   N GKP   +   EV   V  L        KI G
Sbjct: 75  TERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAA-VGEVKAAVDRLRLAELDLKKIGG 133

Query: 179 LTV-----PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQ 233
             +                 EP+GV   I P+N+PL     K+  +   GN +V+K +  
Sbjct: 134 DYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSIS 193

Query: 234 TPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQEL 293
            PL A    K   +AG PP  + +++  G  A   + +   V  +SFTG  + G+ V ++
Sbjct: 194 DPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEK-IVADDRVAAVSFTGSTEVGERVVKV 252

Query: 294 AAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYD 353
                +K   +ELGG  P I+ +DAD+D A +     ++   GQ C A         VY 
Sbjct: 253 GG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYG 309

Query: 354 EFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGN 413
           + VE+   R     VGDP    V+ GP I P    +++  I   +E    +  GG RLG 
Sbjct: 310 KLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGP 369

Query: 414 RGYFVQP 420
                  
Sbjct: 370 TYVQPTL 376

>d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  198 bits (503), Expect = 5e-59
 Identities = 86/335 (25%), Positives = 129/335 (38%), Gaps = 17/335 (5%)

Query: 97  IDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLK 156
           I   V  AR+AF+       +   R + +     +I +N++ ++     + GK    S  
Sbjct: 2   ISDTVKRAREAFNS--GKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYY 59

Query: 157 SEVPMVVRLLHYYA----GWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLF 212
            EV  V+  L         WA+              +    EP+GV   I  WN+P  L 
Sbjct: 60  EEVAHVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLT 119

Query: 213 TWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASH 272
              +  A+  GN ++LK +E +   A  +A L  +          +   G          
Sbjct: 120 IQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQ---YMDQNLYLVVKGGVPETTELLK 176

Query: 273 MDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALF 332
              D + +TG    GKIV   AAK +L PVTLELGGKSP  +  D D+D A     +  F
Sbjct: 177 ERFDHIMYTGSTAVGKIVMAAAAK-HLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF 235

Query: 333 YNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLR 392
            N GQ C A         + ++ VEK K        G+  K   + G  I+   FQ+V  
Sbjct: 236 MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLK-DFYGEDAKQSRDYGRIINDRHFQRVKG 294

Query: 393 YIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVT 427
            I +           G        ++ PT+  DV 
Sbjct: 295 LIDNQK------VAHGGTWDQSSRYIAPTILVDVD 323

>d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Vibrio harveyi [TaxId: 669]

 Score =  131 bits (330), Expect = 3e-34
 Identities = 50/337 (14%), Positives = 103/337 (30%), Gaps = 22/337 (6%)

Query: 71  SGKTFPVYDPRTAEVIAN-VAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAA 129
           +   F   +  T E +          ++++A   A K   +  + ++   +R+ ++   A
Sbjct: 1   TDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARD--FRRLNNSKRASLLRTIA 58

Query: 130 DLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD----- 184
             +E   +++ A        P V+    E+      L  +A   +         D     
Sbjct: 59  SELEARSDDIIARAHLETALPEVRL-TGEIARTANQLRLFADVVNSGSYHQAILDTPNPT 117

Query: 185 ----GNYHIQTLHEPIGVAGQIVPWNFPL--LLFTWKVAPALTCGNTIVLKSAEQTPLT- 237
                   I+     +G        NFPL         A AL  G  +++K     P T 
Sbjct: 118 RAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTS 177

Query: 238 ---ALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA 294
              A  + +   +  LP  +  ++ G     G AL SH ++  + FTG    G+ +  LA
Sbjct: 178 QIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLA 237

Query: 295 AKSNLKPVTLELGGKSPFIIFDDADVDQAVEL---AHFALFYNQGQCCCAGSRTYVHERV 351
            +           G         + +    +L      ++    GQ C      +     
Sbjct: 238 HERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTP 297

Query: 352 YDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQ 388
             +   +     +R+       +   +         +
Sbjct: 298 ETQAFIETAQSLIRQQSPSTLLTPGIRDSYQSQVVSR 334

>d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Thermotoga maritima [TaxId: 2336]

 Score =  125 bits (313), Expect = 3e-32
 Identities = 41/310 (13%), Positives = 94/310 (30%), Gaps = 19/310 (6%)

Query: 95  EDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQS 154
           +++       R+A+D       T  E+++ + + A+ +++  +E+      +  K   + 
Sbjct: 1   DELLEKAKKVREAWDV--LRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERG 58

Query: 155 LKSEVPMVVRL-------------LHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQ 201
           +K    +V RL                  G  D +  +         ++     + +   
Sbjct: 59  VKE--SLVDRLALNDKRIDEMIKACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPI 116

Query: 202 IVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSG- 260
            + +     +       AL  GNTI+L+       +   +     EA     +       
Sbjct: 117 GIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEF 176

Query: 261 YGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADV 320
              T  + +   + + +         G  +      +   PV     G     + + AD+
Sbjct: 177 IENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADL 236

Query: 321 DQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP 380
            +AV +   A        C A  +  VHE++  EF+        +  V         +  
Sbjct: 237 KKAVPVIINAKTQR-PGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRGCEKTREIV 295

Query: 381 QIDPEQFQKV 390
                  +  
Sbjct: 296 PDVVPATEDD 305

>d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 436

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 71.0 bits (173), Expect = 6e-14
 Identities = 37/287 (12%), Positives = 87/287 (30%), Gaps = 32/287 (11%)

Query: 97  IDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLK 156
             +    ARKA +      ++   RS I+ +  D ++ N   +       N      + +
Sbjct: 5   SQQIAKNARKAGNI--LKTISNEGRSDILYKIHDALKANAHAIEE----ANKIDLAVAKE 58

Query: 157 SEV--PMVVRL--------------LHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAG 200
           + +   ++ RL              +   A   D +  + +  + +  +        V  
Sbjct: 59  TGLADSLLKRLDLFKGDKFEVMLQGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGV 118

Query: 201 QIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPG------V 254
            +V +     +     A ++  GN  +LK  +++  T   +AK+ ++            V
Sbjct: 119 LLVIFESRPEVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPV 178

Query: 255 LNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFII 314
            +V         + L    +   L           +      +   PV     G     +
Sbjct: 179 GSVQLIETRQDVSDLLDQDEYIDLVVPR---GSNALVRKIKDTTKIPVLGHADGICSIYL 235

Query: 315 FDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKA 361
            +DAD+ +A  ++  A       C        ++ +    +      
Sbjct: 236 DEDADLIKAKRISLDAKTNYPAGCNA-METLLINPKFSKWWEVLENL 281

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	456
d1bxsa_	494	Aldehyde reductase (dehydrogenase), ALDH {Sheep (O	100.0
d1o04a_	494	Aldehyde reductase (dehydrogenase), ALDH {Human (H	100.0
d1a4sa_	503	Aldehyde reductase (dehydrogenase), ALDH {Baltic c	100.0
d1wnda_	474	Putative betaine aldehyde dehydrogenase YdcW {Esch	100.0
d1uzba_	516	1-pyrroline-5-carboxylate dehydrogenase {Thermus t	100.0
d1ky8a_	499	Non-phosphorylating glyceraldehyde-3-phosphate deh	100.0
d1euha_	474	Aldehyde reductase (dehydrogenase), ALDH {Streptoc	100.0
d1ez0a_	504	Aldehyde reductase (dehydrogenase), ALDH {Vibrio h	100.0
d1ad3a_	446	Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat	100.0
d1o20a_	414	Gamma-glutamyl phosphate reductase {Thermotoga mar	100.0
d1vlua_	436	Gamma-glutamyl phosphate reductase {Baker's yeast	100.0
d1k75a_	431	L-histidinol dehydrogenase HisD {Escherichia coli	85.75

>d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=100.00  E-value=2.2e-87  Score=699.29  Aligned_cols=403  Identities=53%  Similarity=0.933  Sum_probs=386.9

Q ss_pred             CCCCccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccC-CCCCCCHHHHHHHHHHHHHH
Q 012806           53 VQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADL  131 (456)
Q Consensus        53 ~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~-~w~~~~~~~R~~iL~~~a~~  131 (456)
                      ..+.++++||||+|+++.++++++++||.||+++++++.++.+|++.||++|++||+.+ .|+.++.++|.++|+++++.
T Consensus         9 ~~~~~~~~yI~G~w~~~~s~~~~~v~nP~t~e~i~~v~~a~~~dvd~Av~aA~~Af~a~~~W~~~s~~eR~~iL~kia~~   88 (494)
T d1bxsa_           9 LQFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADL   88 (494)
T ss_dssp             CCCCCCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHH
T ss_pred             CCcCcCCEEECCEecCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHHH
Confidence            56667899999999998889999999999999999999999999999999999999743 59999999999999999999


Q ss_pred             HHHhHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHH
Q 012806          132 IEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLL  211 (456)
Q Consensus       132 l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~  211 (456)
                      |++++++|++++++|+|||..++...|+..+++.++|++.+.++..+...+.+.+...++.++|+|||++|+|||||+.+
T Consensus        89 L~~~~eela~l~~~E~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~  168 (494)
T d1bxsa_          89 IERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLM  168 (494)
T ss_dssp             HHHTHHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred             HHhCHHHHHHHHHHhcCCchhhhhhhhhhhhhHHHHHHhhhhhhhcceeecCCCCceeEEEEccEEEEEEEeCccchhHH
Confidence            99999999999999999999987667999999999999999999888888877788899999999999999999999999


Q ss_pred             HHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHH
Q 012806          212 FTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQ  291 (456)
Q Consensus       212 ~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~  291 (456)
                      +++++++||++||+||+|||+.+|+++..++++++++|+|+|++|+|+|++.++++.|+.||+|++|.||||+.+|+.|.
T Consensus       169 ~~~~i~~ALaaGN~VVlKpse~tp~~a~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~p~v~~i~fTGS~~~g~~i~  248 (494)
T d1bxsa_         169 FLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIK  248 (494)
T ss_dssp             HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHHHcCCeEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEecCCHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999998889999999999999999999999999999


Q ss_pred             HHHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCC
Q 012806          292 ELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDP  371 (456)
Q Consensus       292 ~~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p  371 (456)
                      +.+++.++||+++|+||+||+||++|||+|.+++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus       249 ~~aa~~~~~~~~lElGG~np~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~~~d~f~~~l~~~~~~~~~g~~  328 (494)
T d1bxsa_         249 EAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNP  328 (494)
T ss_dssp             HHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCT
T ss_pred             HHhcccCCCeEEEEcCCcCcEEECcCcchhHhHHHHHHHHhcCCCcccccceEEecccchhHHHHHHHHhhhhheeeecc
Confidence            99887689999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEcccc
Q 012806          372 FKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVT  450 (456)
Q Consensus       372 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~  450 (456)
                      .++++++||++++++++++.++|++++++||++++||...++.|+|++|||+.+++++|+.+.+ +||||++|+.|+|.+
T Consensus       329 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FGPvl~v~~~~~~~  408 (494)
T d1bxsa_         329 LTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLD  408 (494)
T ss_dssp             TSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHH
T ss_pred             CCCCCcCCCcCCHHHHHHHHHHHHHHHHcCCEEEeCCCccCCCceeEcCEEEeCCCCCcHHHhccccCceEEEEEECCHH
Confidence            9999999999999999999999999999999999999887788999999999999999977775 999999999999999


Q ss_pred             ccccc
Q 012806          451 DCTSI  455 (456)
Q Consensus       451 eai~~  455 (456)
                      |+|++
T Consensus       409 eai~~  413 (494)
T d1bxsa_         409 DVIKR  413 (494)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99975

>d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=100.00  E-value=1.3e-86  Score=693.12  Aligned_cols=403  Identities=56%  Similarity=0.949  Sum_probs=385.5

Q ss_pred             CCCCccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccC-CCCCCCHHHHHHHHHHHHHH
Q 012806           53 VQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADL  131 (456)
Q Consensus        53 ~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~-~w~~~~~~~R~~iL~~~a~~  131 (456)
                      +.+..+++||||+|+++.++++++++||.||+++++++.++.+|+++||++|++||+.+ .|++++.++|.++|+++++.
T Consensus         9 p~~~~~~~~I~G~w~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~Af~~~~~W~~~~~~eRa~iL~~~a~~   88 (494)
T d1o04a_           9 PEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADL   88 (494)
T ss_dssp             CCCCCCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHH
T ss_pred             CccccCCeEECCEecCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHHH
Confidence            34667799999999998899999999999999999999999999999999999999742 59999999999999999999


Q ss_pred             HHHhHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHH
Q 012806          132 IEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLL  211 (456)
Q Consensus       132 l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~  211 (456)
                      |++++++|++++++|+|||..++...|+..++..++||+++..+..++..+...+...++.++|+|||++|+|||||+..
T Consensus        89 l~~~~eela~~~~~E~GK~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~  168 (494)
T d1o04a_          89 IERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLM  168 (494)
T ss_dssp             HHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred             HHHhHHHHHHHHHHHhCcchhhhhhhHHHHHHHHHHHHHHHHHHhcCceeccCCCceeEEEEecccEEEEECCcccHHHH
Confidence            99999999999999999999998767999999999999999999888888877788889999999999999999999999


Q ss_pred             HHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHH
Q 012806          212 FTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQ  291 (456)
Q Consensus       212 ~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~  291 (456)
                      +++++++||++||+||+|||+.+|+++.+++++++++|+|+|++|+|+|++.++++.|..|++++.|.||||+.+|+.|.
T Consensus       169 ~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~l~~~aglP~gv~~~v~g~~~~~g~~L~~~~~v~~v~fTGS~~~g~~i~  248 (494)
T d1o04a_         169 QAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQ  248 (494)
T ss_dssp             HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHHHcCCeEEEeCCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHhhCCCcCEEEEeCCHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999998889999999999999999999999999999


Q ss_pred             HHHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCC
Q 012806          292 ELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDP  371 (456)
Q Consensus       292 ~~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p  371 (456)
                      +.++..++||+++|+||+||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++|+|
T Consensus       249 ~~aa~~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p  328 (494)
T d1o04a_         249 VAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNP  328 (494)
T ss_dssp             HHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCT
T ss_pred             HHhhccCCCeEEEECCCcCcEEEccCccHHHHHHhhhhhccccCcccccccccccccchhhHHHHHHHHHHhhheeecCc
Confidence            88875589999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEcccc
Q 012806          372 FKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVT  450 (456)
Q Consensus       372 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~  450 (456)
                      .++++++||++++.+++++.++|++++++|+++++||....++|+|++|||+.+++++|+.+.+ +||||++|+.|+|.+
T Consensus       329 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FGPvl~v~~~~~~~  408 (494)
T d1o04a_         329 FDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIE  408 (494)
T ss_dssp             TSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHH
T ss_pred             ccccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCceEcCEEEeCCCCCCHHHhccccCceEEEEEeCCHH
Confidence            9999999999999999999999999999999999999887778999999999999999977775 999999999999999


Q ss_pred             ccccc
Q 012806          451 DCTSI  455 (456)
Q Consensus       451 eai~~  455 (456)
                      |+|++
T Consensus       409 eai~~  413 (494)
T d1o04a_         409 EVVGR  413 (494)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99875

>d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Baltic cod (Gadus callarias) [TaxId: 8053]

Probab=100.00  E-value=2e-83  Score=669.76  Aligned_cols=396  Identities=37%  Similarity=0.668  Sum_probs=376.9

Q ss_pred             CCccCceeCCEEeeCCCCCee-eeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 012806           55 ISYTKNLINGQFVDAASGKTF-PVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIE  133 (456)
Q Consensus        55 ~~~~~~~I~G~~~~~~~~~~~-~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~  133 (456)
                      +....+||||+|+++.+|+++ +++||.||+++++++.++.+|+++||++|++||+  .|++++..+|.++|+++++.|+
T Consensus        17 ~~~~~n~I~G~~v~~~~g~~~~~V~nP~tge~i~~v~~a~~~dV~~AV~aA~~A~~--~W~~~s~~eR~~iL~~~a~~L~   94 (503)
T d1a4sa_          17 VTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYL--KWSKMAGIERSRVMLEAARIIR   94 (503)
T ss_dssp             CCSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHH
T ss_pred             ecCCCeEECCEEeCCCCCCeeeeeecCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHH
Confidence            344568999999998888766 6999999999999999999999999999999999  8999999999999999999999


Q ss_pred             HhHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHH
Q 012806          134 KNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFT  213 (456)
Q Consensus       134 ~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~  213 (456)
                      +++++|++++++|+|||+.++. .|+..+++.++|++.+..+..+.....+.+...++.++|+|||++|+|||||+...+
T Consensus        95 ~~~eela~~~~~etGkp~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~NfP~~~~~  173 (503)
T d1a4sa_          95 ERRDNIAKLEVINNGKTITEAE-YDIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAA  173 (503)
T ss_dssp             HTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEECSEEEEECCSSSHHHHHH
T ss_pred             HhHHHHHHHHHHhhhhcchhhh-hhhhhhhhcccccccccccccccccccCCCcccccccccceeeecccCCCChHHHHH
Confidence            9999999999999999999998 699999999999999998887777666667788999999999999999999999999


Q ss_pred             hHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHH
Q 012806          214 WKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQEL  293 (456)
Q Consensus       214 ~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~  293 (456)
                      +++++||++||+||+|||+.+|+++..++++++++|+|+|++|+|+| +.++++.|+.|++|++|.||||+.+|+.|.+.
T Consensus       174 ~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g-~~e~g~~L~~~~~v~~V~fTGS~~~G~~i~~~  252 (503)
T d1a4sa_         174 WKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKKVMEM  252 (503)
T ss_dssp             HHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred             HHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCCCeEEEecC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999 67899999999999999999999999999999


Q ss_pred             HhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCC
Q 012806          294 AAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFK  373 (456)
Q Consensus       294 ~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~  373 (456)
                      +++ ++||+++|+|||||+||++|||+|.|++.+++++|.++||.|++++|+|||++++++|++++.+.++++++|+|.+
T Consensus       253 aa~-~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~ri~v~~~~~~~~~~~l~~~~~~~~~g~~~~  331 (503)
T d1a4sa_         253 SAK-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLL  331 (503)
T ss_dssp             HHT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTS
T ss_pred             hhh-cCCcEEEECCCcCcEEECCCccHHHHhhhhhcchhccCCCccccCcceEEEechhhhHHHHHHHhhhhEeeccccc
Confidence            988 8999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccC------CCCceEecEEEecCCCChHhhhc-cccceEEeEEE
Q 012806          374 SGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG------NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIIL  446 (456)
Q Consensus       374 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~------~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~  446 (456)
                      +.+++||++++.+++++.+++++++++||++++||....      .+|+|++||||.+++++|+++.+ +||||++|+.|
T Consensus       332 ~~~~~gp~i~~~~~~~~~~~~~~a~~~Ga~v~~gg~~~~~~~~~~~~G~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~  411 (503)
T d1a4sa_         332 TETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPF  411 (503)
T ss_dssp             TTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred             cccccccccCHHHHHHHHHHHHHHHHcCCEEEECCcccCCCCcccCCceEEcCEEEeCCCCCCHHHhccccCceEEEEEc
Confidence            999999999999999999999999999999999997522      47899999999999999977775 99999999999


Q ss_pred             ccccccccc
Q 012806          447 CVVTDCTSI  455 (456)
Q Consensus       447 ~~~~eai~~  455 (456)
                      +|.+|+|++
T Consensus       412 ~~~~eai~~  420 (503)
T d1a4sa_         412 DTEEEVLQR  420 (503)
T ss_dssp             CCHHHHHHH
T ss_pred             CCHHHHHHH
Confidence            999999875

>d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Putative betaine aldehyde dehydrogenase YdcW
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=7.2e-82  Score=654.66  Aligned_cols=394  Identities=35%  Similarity=0.592  Sum_probs=365.8

Q ss_pred             ccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 012806           57 YTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM  136 (456)
Q Consensus        57 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~  136 (456)
                      ++++||||+|+++ +|++++++||.||+++++++.++.+|+++|+++|++||+  .|++++.++|.++|+++++.|++++
T Consensus         2 ~~~l~I~G~~v~~-~g~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~~   78 (474)
T d1wnda_           2 QHKLLINGELVSG-EGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFA--EWGQTTPKVRAECLLKLADVIEENG   78 (474)
T ss_dssp             CCCEEETTEEECC-CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred             CCccEECCeEeCC-CCCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhCH
Confidence            4589999999965 678999999999999999999999999999999999999  8999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccC-CCCCcceEEEeeccceEEEEccCCchHHHHHhH
Q 012806          137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP-GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWK  215 (456)
Q Consensus       137 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~  215 (456)
                      ++|++++++|+|||+.++...++..+...++|++...........+ ...+...++.++|+|||++|+|||||+.+.+++
T Consensus        79 ~ela~~~~~e~Gk~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~  158 (474)
T d1wnda_          79 QVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWK  158 (474)
T ss_dssp             HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred             HHHHHHHHHHhCCChhHhhhcccccccccccccccccccccccccccccCCcceEEEEecccceEEEeecchHhhhhhcc
Confidence            9999999999999999997667777777777777665544333222 234567889999999999999999999999999


Q ss_pred             HHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHh
Q 012806          216 VAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA  295 (456)
Q Consensus       216 ~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a  295 (456)
                      +++||++||+||+|||+.+|+++..++++++++ +|+|++|+|+|++.++++.|++||+|++|.||||+++|+.|.+.++
T Consensus       159 ~a~ALaaGN~Vv~Kps~~~p~~~~~~~~l~~~~-lP~gv~~~v~g~~~~~g~~L~~~p~i~~v~fTGS~~~G~~i~~~a~  237 (474)
T d1wnda_         159 LAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTA  237 (474)
T ss_dssp             HHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHG
T ss_pred             HHHHHHhCCCEEEeCCCcCcHHHHHHHHHHHHh-CCCCcEEEEeCCcHHHHHHHHhCCCcCEEEeeCCHHHHHHHHHhhh
Confidence            999999999999999999999999999999774 9999999999988999999999999999999999999999999999


Q ss_pred             hCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCC
Q 012806          296 KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG  375 (456)
Q Consensus       296 ~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~  375 (456)
                      + ++||+++|+|||+|+||++|||++.|++.+++++|+|+||.|++++|+|||+++||+|+++|+++++++++|+|.+++
T Consensus       238 ~-~~k~~~lElgG~~p~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~~~~~l~~~~~~l~~G~~~~~~  316 (474)
T d1wnda_         238 S-SIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDES  316 (474)
T ss_dssp             G-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTT
T ss_pred             c-CCCeEEEEcCCCCceEEcCchhhhhhhhhhhhhcccCCCcccccccccccccccchhhhhhhHHHHHhhccCCcCCCC
Confidence            8 899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccCCCCCHHHHHHHHHHHHHHHHcCCe-EEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccc
Q 012806          376 VEQGPQIDPEQFQKVLRYIRSGIESNAT-LECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCT  453 (456)
Q Consensus       376 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~-v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai  453 (456)
                      +++||++++.+++++.+++++++++|+. ++.|+....+.|+|++|||+.+++++|+.+.+ +||||++|++|+|.+|+|
T Consensus       317 ~~~Gpli~~~~~~~~~~~i~~a~~~ga~~v~~G~~~~~~~g~~~~Ptil~~~~~~~~~~~eE~FGPVl~v~~~~~~deai  396 (474)
T d1wnda_         317 TELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVV  396 (474)
T ss_dssp             CCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHH
T ss_pred             ceecccccccccchHHHHHHHHHHCCCeEEEeCCcccCCCceEEeeeEeecccccccceeecccCCeEEEEEeCCHHHHH
Confidence            9999999999999999999999999985 55566666678999999999999999977775 999999999999999999


Q ss_pred             cc
Q 012806          454 SI  455 (456)
Q Consensus       454 ~~  455 (456)
                      ++
T Consensus       397 ~~  398 (474)
T d1wnda_         397 NW  398 (474)
T ss_dssp             HH
T ss_pred             HH
Confidence            75

>d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: 1-pyrroline-5-carboxylate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=4.6e-80  Score=646.89  Aligned_cols=392  Identities=31%  Similarity=0.518  Sum_probs=365.5

Q ss_pred             ccCceeCCEEeeCCCCCeeeeecCC-CCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 012806           57 YTKNLINGQFVDAASGKTFPVYDPR-TAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKN  135 (456)
Q Consensus        57 ~~~~~I~G~~~~~~~~~~~~v~~P~-tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~  135 (456)
                      .+++||||+|++  ++++++++||. |||++++++.++.+|+++||++|++||+  .|+++|.++|.++|+++++.|+++
T Consensus        37 ~~~l~I~G~~v~--s~~~~~~~nP~~tge~i~~~~~a~~~dv~~Av~aA~~A~~--~W~~~s~~~R~~iL~~~a~~l~~~  112 (516)
T d1uzba_          37 HYPLYIGGEWVD--TKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK--TWKDWPQEDRSRLLLKAAALMRRR  112 (516)
T ss_dssp             EECEEETTEEEC--CSSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred             CCCeEEcCEEEC--CCCCeEEeCCCCCCeEEEEEcCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHH
Confidence            458999999986  45688999995 7999999999999999999999999999  899999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCC--CCCcceEEEeeccceEEEEccCCchHHHHH
Q 012806          136 MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG--DGNYHIQTLHEPIGVAGQIVPWNFPLLLFT  213 (456)
Q Consensus       136 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~  213 (456)
                      +++|++++++|+|||..++. .|+..+++.++||++.+.+..+.....  ..+...+..++|+|||++|+|||||+.+++
T Consensus       113 ~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~PwN~Pl~~~~  191 (516)
T d1uzba_         113 KRELEATLVYEVGKNWVEAS-ADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFT  191 (516)
T ss_dssp             HHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHH
T ss_pred             HHHHHHHHHHHhCCCccccc-hhHHHHHHHHHHHHHHHHhhhhcccccccccccceeEEeeccCcccccccccccccccc
Confidence            99999999999999999997 699999999999999888776554332  235567788999999999999999999999


Q ss_pred             hHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHH
Q 012806          214 WKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQEL  293 (456)
Q Consensus       214 ~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~  293 (456)
                      +++++||++||+||+|||+.+|+++..+.++++++|+|+|++|+|+|++.+++..|+.||+|++|.||||+.+|+.|.+.
T Consensus       192 ~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~hp~v~~I~FTGs~~~G~~i~~~  271 (516)
T d1uzba_         192 GMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEA  271 (516)
T ss_dssp             HHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHH
T ss_pred             ccccchhhhcccccccccchhHHHHHHHHHHHHHhCcCcCeEEEccCChHHHHHHHHhCCCcCEEecccchhHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999888999999999999999999999999999998


Q ss_pred             Hhh-----CCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhc
Q 012806          294 AAK-----SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIV  368 (456)
Q Consensus       294 ~a~-----~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~  368 (456)
                      ++.     .++||+++|+||+||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++++++++++++
T Consensus       272 aa~~~~~~~~~k~v~lElgG~~p~iV~~dAd~~~aa~~i~~~~~~~~GQ~C~a~~ri~v~~~i~d~~~~~~~~~~~~l~~  351 (516)
T d1uzba_         272 AGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSV  351 (516)
T ss_dssp             HTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCB
T ss_pred             HhhcccchhhhhhheeeccCccceeeecchhHHHHHHHHhhhhcccCCCcccccCccccccccccchhhHHHHHHHhccc
Confidence            872     378999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEc
Q 012806          369 GDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILC  447 (456)
Q Consensus       369 g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~  447 (456)
                      | |.++++++||+++..+++++.++|++++++|+.+ +||...+.+|+|++||||.+++++|+.+.+ +||||++|+.|+
T Consensus       352 g-~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v-~~g~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~  429 (516)
T d1uzba_         352 G-PAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLV-LGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVK  429 (516)
T ss_dssp             S-CGGGCCSBCCCSCHHHHHHHHHHHHHHTTTSEEE-ECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEES
T ss_pred             C-CCcccCccccccCHHHHHHHHHHHHHHHHCCCEE-ECCCcCCCCCceECCEEEecCCCCchhhcCCCcCceEEEEEeC
Confidence            9 6688999999999999999999999999999765 577666678999999999999999977765 999999999999


Q ss_pred             cccccccc
Q 012806          448 VVTDCTSI  455 (456)
Q Consensus       448 ~~~eai~~  455 (456)
                      |.+|+|++
T Consensus       430 d~eeai~~  437 (516)
T d1uzba_         430 DFAEALEV  437 (516)
T ss_dssp             SHHHHHHH
T ss_pred             CHHHHHHH
Confidence            99999875

>d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN
species: Archaeon Thermoproteus tenax [TaxId: 2271]

Probab=100.00  E-value=1.5e-73  Score=595.57  Aligned_cols=391  Identities=28%  Similarity=0.433  Sum_probs=356.6

Q ss_pred             CCccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 012806           55 ISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK  134 (456)
Q Consensus        55 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~  134 (456)
                      +..+++||||+|+.  ++++++++||.||+++++++.++.+|+++|+++|+++++. .|+++|.++|.++|+++++.|++
T Consensus        14 ~~~~~~~I~G~~~~--sg~~~~v~~P~t~~~i~~v~~a~~~dv~~Av~~A~~a~~~-~w~~~~~~~R~~iL~~~a~~l~~   90 (499)
T d1ky8a_          14 VPVYPSYLAGEWGG--SGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRW-SARDMPGTERLAVLRKAADIIER   90 (499)
T ss_dssp             EEEECEECSSSEEC--CSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHH-HHHHSCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEECCeECC--CCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHhchh-hhhcCCHHHHHHHHHHHHHHHHH
Confidence            44579999999974  6889999999999999999999999999999999887762 59999999999999999999999


Q ss_pred             hHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCcccCC-----CCCcceEEEeeccceEEEEccCCchH
Q 012806          135 NMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG-----DGNYHIQTLHEPIGVAGQIVPWNFPL  209 (456)
Q Consensus       135 ~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~P~Gvv~~i~p~N~P~  209 (456)
                      ++++|++++++|+|||..+++ .|+..+++.++|++...++..+.....     ..+...+..++|+|||++|+|||||+
T Consensus        91 ~~~~la~~~~~etGk~~~~a~-~Ev~~~i~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~N~P~  169 (499)
T d1ky8a_          91 NLDVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPL  169 (499)
T ss_dssp             THHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHGGGGGGTTTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCSSSHH
T ss_pred             hHHHHHHHHHHHhCCCHHHHh-hhhhcccccccchhhhhhhhhhceeccccccccccccceeeeeccccccccccccccc
Confidence            999999999999999999997 699999999999999888766544321     22456788999999999999999999


Q ss_pred             HHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHH
Q 012806          210 LLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKI  289 (456)
Q Consensus       210 ~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~  289 (456)
                      .++++++++||++||+||+|||+.+|+++..+.+++.++|+|.++++++.+++ +.+..|..|++++.+.||||+..++.
T Consensus       170 ~~~~~~~~~ALaaGn~Vi~Kps~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~-~~~~~l~~~~~i~~v~ftGs~~~g~~  248 (499)
T d1ky8a_         170 FDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGER  248 (499)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCCCG-GGGHHHHHCTTCCEEEEESCHHHHHH
T ss_pred             hhhhhcchhhhcccccccccccccchhhhhhhccccccccccceeeecccCCh-HHHHHHhhccceeEEEeecccccceE
Confidence            99999999999999999999999999999999999999999999999999965 45688999999999999999999999


Q ss_pred             HHHHHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcC
Q 012806          290 VQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVG  369 (456)
Q Consensus       290 i~~~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g  369 (456)
                      +.+.+   +.+++++|+||+||+||++|||+|.|++.+++++|+++||.|++++|+|||++++|+|+++|+++++++++|
T Consensus       249 i~~~~---~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~d~f~~~l~~~~~~l~~G  325 (499)
T d1ky8a_         249 VVKVG---GVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVG  325 (499)
T ss_dssp             HHHHH---CSSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBS
T ss_pred             Eeecc---cccceEEecCCCCeEEEcCCcChhhhhhhhhhhhhccCcccccccccccccchhHHHHHHHHHHHHHhCccC
Confidence            98876   458999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEE---ecCCCChHhhhc-cccceEEeEE
Q 012806          370 DPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVF---SDVTVSFISLLQ-FLIPIFSFII  445 (456)
Q Consensus       370 ~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl---~~v~~~~~~~~~-~fgPv~~vv~  445 (456)
                      +|.|+++++||++++++++++.++|++++.+||+++.||....  ..++.++++   .++.+||+.+.+ +||||++|+.
T Consensus       326 ~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~~~~~~~--~~~~~~~~~~~~~~~~~d~~~~~eE~FGPvl~v~~  403 (499)
T d1ky8a_         326 DPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLG--PTYVQPTLVEAPADRVKDMVLYKREVFAPVASAVE  403 (499)
T ss_dssp             CTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEEE--TTEECCEEEECCHHHHTTSHHHHSCCCSSEEEEEE
T ss_pred             CCCCccccccccchHHHHHHHHHHHHHHHHcCCEEeeeecccc--ccccccccccccccCCCCChhhhccccCceEEEEE
Confidence            9999999999999999999999999999999999999997643  334444444   345678867765 9999999999


Q ss_pred             Eccccccccc
Q 012806          446 LCVVTDCTSI  455 (456)
Q Consensus       446 ~~~~~eai~~  455 (456)
                      |+|.+|++++
T Consensus       404 ~~~~~eai~~  413 (499)
T d1ky8a_         404 VKDLDQAIEL  413 (499)
T ss_dssp             ESSHHHHHHH
T ss_pred             cCCHHHHHHH
Confidence            9999999875

>d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Streptococcus mutans [TaxId: 1309]

Probab=100.00  E-value=1.7e-71  Score=577.29  Aligned_cols=388  Identities=29%  Similarity=0.473  Sum_probs=358.4

Q ss_pred             CccCceeCCEEeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 012806           56 SYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKN  135 (456)
Q Consensus        56 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~  135 (456)
                      +.++|||||+|+.  ++++++++||.||+++++++.++.+|+++||++|++|++  .|++++.++|.++|+++++.|.++
T Consensus         2 k~~~n~I~G~~~~--~~~~~~v~~P~tg~~i~~~~~a~~~dv~~Ai~~A~~A~~--~W~~~s~~~R~~iL~~~a~~L~~~   77 (474)
T d1euha_           2 KQYKNYVNGEWKL--SENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQP--AWRALSYIERAAYLHKVADILMRD   77 (474)
T ss_dssp             CBCCEEETTEEEC--CSSEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred             ccccceecCeecC--CCCCEEEeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHhH--HHhhCCHHHHHHHHHHHHHHHHHh
Confidence            3469999999975  567999999999999999999999999999999999999  899999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHhcCccc------CCCCCcceEEEeeccceEEEEccCCchH
Q 012806          136 MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTV------PGDGNYHIQTLHEPIGVAGQIVPWNFPL  209 (456)
Q Consensus       136 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~------~~~~~~~~~~~~~P~Gvv~~i~p~N~P~  209 (456)
                      +++|++++++|+||+..++. .|+...+..++++............      ....+...++.++|+|||++|+|||||+
T Consensus        78 ~~~la~~~~~e~Gk~~~~a~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~n~P~  156 (474)
T d1euha_          78 KEKIGAILSKEVAKGYKSAV-SEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPV  156 (474)
T ss_dssp             HHHHHHHHHHHHTCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTT
T ss_pred             HHHHHHHHHHHhCCCcchhc-cccchhHHHHHHHHHHHhhhhcccccccccccccCCceeEEEeeceeEEEEeccccccc
Confidence            99999999999999999987 6999999999999887654432211      1223456788899999999999999999


Q ss_pred             HHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHH
Q 012806          210 LLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKI  289 (456)
Q Consensus       210 ~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~  289 (456)
                      ..+++++++||++||+||+|||+.+|.++.+++++|.++|+|+|++|+|+|++.++++.|..|++++.|.||||+.+++.
T Consensus       157 ~~~~~~~~~aL~aGN~vV~Kps~~~~~~~~~l~~~~~eaglP~gv~~~i~g~~~~~~~~L~~~~~v~~v~ftGs~~~~~~  236 (474)
T d1euha_         157 NLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGER  236 (474)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHH
T ss_pred             hhhhhhchhhhhccccceecccccchHHHHHHHHHHHHhCCCcCeEEEccCChHHHHHHHHhCCCccEEEecCccccccc
Confidence            99999999999999999999999999999999999999999999999999988899999999999999999999999999


Q ss_pred             HHHHHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcC
Q 012806          290 VQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVG  369 (456)
Q Consensus       290 i~~~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g  369 (456)
                      +.+.++   ++|+++|+||+||+||++|||++.+++.+++++|.++||.|+++++||||++++++|+++++++...++.|
T Consensus       237 i~~~a~---~k~~~~e~gG~~~~iV~~dAdl~~aa~~i~~~~~~~~Gq~C~a~~~i~v~~~~~~~~~~~l~~~~~~~~~~  313 (474)
T d1euha_         237 IGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIG  313 (474)
T ss_dssp             HHHHTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBS
T ss_pred             hhhhcc---cceEEEecCCcceEEEECCCchhhHHHHHHHHHhhCCCCccccccccchhhhhhhhhhHhhhhhhhhcccc
Confidence            988764   68999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhc-cccceEEeEEEcc
Q 012806          370 DPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCV  448 (456)
Q Consensus       370 ~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~  448 (456)
                      ++.+. .+++|++.....+++.+.+......|+..+.++.   ..|+|++|||+.+++++|+.+.+ +||||++|+.|+|
T Consensus       314 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~  389 (474)
T d1euha_         314 NPEDD-ADITPLIDTKSADYVEGLINDANDKGATALTEIK---REGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTS  389 (474)
T ss_dssp             CGGGT-CSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCC---EETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESC
T ss_pred             Ccccc-cccccccchHHHHHHHHHHHhhhcccccccccCC---CCCCCcCCEEEecCCCcchhhhcccCCcEEEEEEeCC
Confidence            99875 4589999999999999999999999988876554   36899999999999999977776 8999999999999


Q ss_pred             ccccccc
Q 012806          449 VTDCTSI  455 (456)
Q Consensus       449 ~~eai~~  455 (456)
                      .+|+|++
T Consensus       390 ~deai~~  396 (474)
T d1euha_         390 VEEAIEI  396 (474)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999975

>d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Vibrio harveyi [TaxId: 669]

Probab=100.00  E-value=2.5e-66  Score=540.56  Aligned_cols=368  Identities=19%  Similarity=0.257  Sum_probs=316.2

Q ss_pred             CCCeeeeecCCCCceEE-EEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCC
Q 012806           71 SGKTFPVYDPRTAEVIA-NVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGK  149 (456)
Q Consensus        71 ~~~~~~v~~P~tge~i~-~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk  149 (456)
                      ++++|+++||+|||.++ +++.++.+|+++||++|++||+  .|++++.++|.++|+++++.|++|+++|++++++|+||
T Consensus         1 t~~~f~~~nP~tge~l~~~~~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk   78 (504)
T d1ez0a_           1 TDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVAR--DFRRLNNSKRASLLRTIASELEARSDDIIARAHLETAL   78 (504)
T ss_dssp             CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCC
T ss_pred             CCCeEEEECCCCCCCcchhccCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            45799999999999997 7999999999999999999999  89999999999999999999999999999999999999


Q ss_pred             ChhhhhhccHHHHHHHHHHHHHhhhHhcCcccC---------CCCCcceEEEeeccceEEEEccCCchHHHHH--hHHHH
Q 012806          150 PYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP---------GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFT--WKVAP  218 (456)
Q Consensus       150 ~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~--~~~~~  218 (456)
                      |..+++ .|+..+++.++||++..++.......         ...+...+..++|+|||++|+|||||+.+.+  +++++
T Consensus        79 p~~~a~-~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwNfPl~~~~~~~~~a~  157 (504)
T d1ez0a_          79 PEVRLT-GEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTAS  157 (504)
T ss_dssp             CHHHHH-HHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHH
T ss_pred             CHHHHH-HHHHHHHHHHHHHHHHHhhhccccccccccccccccCcccceeEEEecCceEEEEecccccchhhhhhHHHHH
Confidence            999997 69999999999999988775443211         1123456788889999999999999997554  58999


Q ss_pred             HhhcCCEEEEecCCCchHHHHHHHHH----HHHcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHH
Q 012806          219 ALTCGNTIVLKSAEQTPLTALYVAKL----FHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA  294 (456)
Q Consensus       219 ALaaGN~vvlKps~~~p~~~~~l~~l----l~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~  294 (456)
                      ||++||+||+|||+.+|.++..+.++    +.++|+|+|++|+|+|++.++++.|+.|++|++|+||||+.+|+.|.+.+
T Consensus       158 ALaaGN~VVlKPs~~tp~ta~~~~~li~~a~~~aGlP~Gv~~~v~g~~~~~g~~L~~~p~v~~V~FTGS~~~g~~i~~~a  237 (504)
T d1ez0a_         158 ALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLA  237 (504)
T ss_dssp             HHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred             HHHHhccceecCcccccchhhhhhhHHHHHhhhhccccCceecccccccccccccccccccceeeeccchHHHHHHHhhh
Confidence            99999999999999999988776554    56779999999999998899999999999999999999999999999999


Q ss_pred             hhCCCccE--EEecCCCCceEEcCCCCHHHHH--HHHHHHhhhcCCCccccCccccccccc-HHHHHHHHHHHHhhhhcC
Q 012806          295 AKSNLKPV--TLELGGKSPFIIFDDADVDQAV--ELAHFALFYNQGQCCCAGSRTYVHERV-YDEFVEKAKARAMRRIVG  369 (456)
Q Consensus       295 a~~~~~~v--~lelgG~~~~iV~~daD~d~aa--~~i~~~~~~~~GQ~C~a~~~v~V~~~v-~~~f~~~l~~~~~~~~~g  369 (456)
                      ++ +++++  ++|+|||||+||++|||++.|+  +.++.++|.|+||.|++++|+||+++. .+.|++.+++.++.   +
T Consensus       238 a~-~~~~~~l~~ElGGknp~iV~~dAd~~~Aa~~~~~~~~~~~~~GQ~C~a~~rv~v~~~~~~~~~~~~~~~~~~~---~  313 (504)
T d1ez0a_         238 HE-RPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQ---Q  313 (504)
T ss_dssp             HH-SSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHH---C
T ss_pred             hc-ccccccccccccccccccccccccHHHHhhhhccccchhhccCccccccccccchhhhhHHHHhhhhhhhhhh---c
Confidence            98 77765  5599999999999999999874  478999999999999999999988876 45677776665543   3


Q ss_pred             CCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccCCCCceEecEEEecCC---CChHhhhc-cccceEEeEE
Q 012806          370 DPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVT---VSFISLLQ-FLIPIFSFII  445 (456)
Q Consensus       370 ~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~---~~~~~~~~-~fgPv~~vv~  445 (456)
                         ++++.+||+++..+++++   ++.+.++|+.+..||..    +.+..|+++..+.   .+++.+.+ +||||++|+.
T Consensus       314 ---~~~~~~gp~i~~~~~~~v---i~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~eE~FGPvl~i~~  383 (504)
T d1ez0a_         314 ---SPSTLLTPGIRDSYQSQV---VSRGSDDGIDVTFSQAE----SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVV  383 (504)
T ss_dssp             ---CCBCCSSHHHHHHHHHHH---HHHHTSTTEEEEECCCC----TTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEE
T ss_pred             ---ccccccccchhhhhhhhh---hhhhhhhhhhccccccc----ccccCCccccccccccccchhhcccccCCeeeeee
Confidence               457889999998887766   66677889998888753    4555666655433   35555665 9999999999


Q ss_pred             Eccccccccc
Q 012806          446 LCVVTDCTSI  455 (456)
Q Consensus       446 ~~~~~eai~~  455 (456)
                      |+|.+|+|++
T Consensus       384 ~~~~~eai~~  393 (504)
T d1ez0a_         384 CENVADMLSL  393 (504)
T ss_dssp             ESSHHHHHHH
T ss_pred             cCCHHHHHHH
Confidence            9999999875

>d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=4.4e-65  Score=523.92  Aligned_cols=346  Identities=26%  Similarity=0.352  Sum_probs=311.1

Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhccHHHHHHHHHHHHHhhhHh
Q 012806           97 IDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKI  176 (456)
Q Consensus        97 v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~  176 (456)
                      |++||++||+||+  .|+.+|.++|.++|+++++.|++|+++|++++++|+||+..++...|+..+++.+++++....+.
T Consensus         2 v~~av~~Ar~Af~--~w~~~s~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~GK~~~ea~~~ev~~~i~~~~~~~~~~~~~   79 (446)
T d1ad3a_           2 ISDTVKRAREAFN--SGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHVLEELDTTIKELPDW   79 (446)
T ss_dssp             HHHHHHHHHHHHH--TTGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH--hhCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            7899999999999  89999999999999999999999999999999999999999987679999999999998876654


Q ss_pred             cCccc----CCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCC
Q 012806          177 HGLTV----PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPP  252 (456)
Q Consensus       177 ~~~~~----~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~ll~~aGlP~  252 (456)
                      .....    ....+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..+++++++. +|+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~vi~Kps~~~p~~~~~~~~~~~~~-~~~  158 (446)
T d1ad3a_          80 AEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQY-MDQ  158 (446)
T ss_dssp             HSCEECCCCSTTTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHH-SCT
T ss_pred             hcccccccCCCCCCcceEEEeecceeEecccccccccccccccccccchhcccccccccceecccccccccccccc-ccc
Confidence            43221    1223456788899999999999999999999999999999999999999999999999999998774 999


Q ss_pred             CcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceEEcCCCCHHHHHHHHHHHhh
Q 012806          253 GVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALF  332 (456)
Q Consensus       253 g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~iV~~daD~d~aa~~i~~~~~  332 (456)
                      ++++++.+.+...+ .+. ++.+|.|.||||+.+|+.|.+.+++ +++|+++|+|||||+||++|||+|.|++.+++++|
T Consensus       159 ~~~~~~~~~~~~~~-~~~-~~~~~~v~fTGs~~~G~~i~~~aa~-~~~~~~lElgG~np~iV~~dADl~~Aa~~iv~~~~  235 (446)
T d1ad3a_         159 NLYLVVKGGVPETT-ELL-KERFDHIMYTGSTAVGKIVMAAAAK-HLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF  235 (446)
T ss_dssp             TTEEECCCSHHHHH-HHT-TSCCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCCCCEEEECSSSCHHHHHHHHHHHHH
T ss_pred             cccccccccchhhh-hhc-ccccCceEEECcHHHHHHHHHHHHh-cCCcEEEECCCcCcEEEecCCchHHHHHHHHHHHh
Confidence            99999998665544 344 5689999999999999999999988 89999999999999999999999999999999999


Q ss_pred             hcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEeCCcccC
Q 012806          333 YNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSGIESNATLECGGDRLG  412 (456)
Q Consensus       333 ~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~  412 (456)
                      .|+||.|++++|+|||++++++|+++|+++++.+ +|+|.++++++||++++.+++++..+++++     +...|+. ..
T Consensus       236 ~~~GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~-~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a-----~~~~g~~-~~  308 (446)
T d1ad3a_         236 MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDF-YGEDAKQSRDYGRIINDRHFQRVKGLIDNQ-----KVAHGGT-WD  308 (446)
T ss_dssp             TTTTCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTSCCCSCHHHHHHHHHTTTTS-----CEEECCC-EE
T ss_pred             cCCCCccccCCccccccchhHHHHHhhhhhhhee-ecccccccccccchhhhhhhhhhhccccch-----hccccee-ec
Confidence            9999999999999999999999999999999887 799999999999999999999998887643     4444443 34


Q ss_pred             CCCceEecEEEecCCCChHhhhc-cccceEEeEEEccccccccc
Q 012806          413 NRGYFVQPTVFSDVTVSFISLLQ-FLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       413 ~~g~~i~PtVl~~v~~~~~~~~~-~fgPv~~vv~~~~~~eai~~  455 (456)
                      ..++|++|||+.+++++|+.+.+ +||||++|+.++|.+|||++
T Consensus       309 ~~~~~~~Ptil~~v~~~~~~~~eE~FgPVl~v~~~~~~~eai~~  352 (446)
T d1ad3a_         309 QSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQF  352 (446)
T ss_dssp             TTTTEECCEEECSCCTTSGGGTSCCCSSEECEEECSSHHHHHHH
T ss_pred             CCCCCcCCEEEECCCCCCHHHhCcccCcceEEEEeccHHHHHHH
Confidence            56889999999999999977775 99999999999999999975

>d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=9.3e-48  Score=391.46  Aligned_cols=312  Identities=14%  Similarity=0.143  Sum_probs=247.8

Q ss_pred             HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhcc------------HHHH
Q 012806           95 EDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSE------------VPMV  162 (456)
Q Consensus        95 ~~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~e------------v~~~  162 (456)
                      +|+++++++|++||+  .|+++|..+|.++|++++++|++|+++|++++++|+||+..++. .|            +..+
T Consensus         1 ee~~~a~~~A~~Af~--~w~~~s~~eR~~iL~k~a~~l~~~~~eia~~~~~e~gk~~~~~~-~e~~~~rl~~~~~~i~~~   77 (414)
T d1o20a_           1 DELLEKAKKVREAWD--VLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGV-KESLVDRLALNDKRIDEM   77 (414)
T ss_dssp             CHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTC-CHHHHHHHCCCHHHHHHH
T ss_pred             CHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhHHhccc-cHHHHHHHhccHHHHHHH
Confidence            588999999999999  99999999999999999999999999999999999999988865 34            5667


Q ss_pred             HHHHHHHHHhhhHhcCcccCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHHH
Q 012806          163 VRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVA  242 (456)
Q Consensus       163 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~  242 (456)
                      ++.+++++...+...+...+..........+.|+|++++++|||||+.++++++++||++||+||+|||+.+|.++..++
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~p~n~p~~~~~~~~~~alaaGN~vvlKps~~tp~~~~~~~  157 (414)
T d1o20a_          78 IKACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIV  157 (414)
T ss_dssp             HHHHHHHHHSCCCTTCEEEEEECTTSCEEEEEEEECCCEEEECCSCTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHH
T ss_pred             HHHHHHHHHhhhhccccccccccccccceeecccccccccccccCcHHHhhhccchheecccchhcccccccccccchhh
Confidence            78888888766555554444333445677788999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHc----CCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCC-ceEEcCC
Q 012806          243 KLFHEA----GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKS-PFIIFDD  317 (456)
Q Consensus       243 ~ll~~a----GlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~-~~iV~~d  317 (456)
                      ++++++    |+|.++++.+.+.+......+..+   +.+.|+||+..++.+.+.+++ +.+++++|+||++ ++||++|
T Consensus       158 ~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~v~~~a~~-~~~~~~le~gGgn~~viv~~d  233 (414)
T d1o20a_         158 SAIREALKETEIPESSVEFIENTDRSLVLEMIRL---REYLSLVIPRGGYGLISFVRD-NATVPVLETGVGNCHIFVDES  233 (414)
T ss_dssp             HHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTC---TTTCSEEEECSCHHHHHHHHH-HCSSCBCCCCCCCEEEEECTT
T ss_pred             hHHHhhhhhccccccccccccccchhhhhhcccc---cccCeEEEcccHHHHHHHhhh-ccccceecccCCCCCeecccc
Confidence            998877    455555777776555555555543   344555555567777777776 5677777777655 6788999


Q ss_pred             CCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHHHHHH
Q 012806          318 ADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRYIRSG  397 (456)
Q Consensus       318 aD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a  397 (456)
                      ||++.|++.++.++|.| ||.|++.+|+|||+++||+|+++|.+...+..++++.++.          .        .  
T Consensus       234 Ad~~~A~~~~~~~~~~~-gq~C~a~~r~~V~~~i~d~f~~~l~~~~~~~~~~~~~~~~----------~--------~--  292 (414)
T d1o20a_         234 ADLKKAVPVIINAKTQR-PGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRGCEK----------T--------R--  292 (414)
T ss_dssp             SCHHHHHHHHHHHHHSC-TTSTTSEEEEEEEHHHHHHHHHHHHHHHHHTTCEEEECHH----------H--------H--
T ss_pred             cchhhhhhHHHhhhhcC-CcccccccccchhHHHHHHHHHHHhHHHHHcCCccccchh----------h--------h--
Confidence            99999999999999877 9999999999999999999999999988876655443211          1        0  


Q ss_pred             HHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhccccceEEeEEEccccccccc
Q 012806          398 IESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQFLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       398 ~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~~fgPv~~vv~~~~~~eai~~  455 (456)
                                         ++.+.+.....+++  -.|+||||++|+.++|.||||++
T Consensus       293 -------------------~~~~~~~~~~~~~~--~~E~FgPvl~v~~~~~~dEAI~~  329 (414)
T d1o20a_         293 -------------------EIVPDVVPATEDDW--PTEYLDLIIAIKVVKNVDEAIEH  329 (414)
T ss_dssp             -------------------HHSTTSEECCGGGT--TCCCCSSEEEEEEESSHHHHHHH
T ss_pred             -------------------hhcccceecccccC--CceeeeeEEEEEEeCCHHHHHHH
Confidence                               11111222222222  12599999999999999999975

>d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.2e-38  Score=324.01  Aligned_cols=324  Identities=16%  Similarity=0.137  Sum_probs=226.1

Q ss_pred             HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHH------HHhcCCChhhh-h-----hccHHHHH
Q 012806           96 DIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALE------TWNNGKPYVQS-L-----KSEVPMVV  163 (456)
Q Consensus        96 ~v~~av~~A~~a~~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~------~~e~Gk~~~~a-~-----~~ev~~~~  163 (456)
                      +++++++.|++|++  .|+.++.++|.++|+++++.|++|.++|++..      +++.|++.... +     ...+...+
T Consensus         4 ~~e~~~~~Ak~A~~--~l~~~s~~~R~~iL~~~a~~L~~~~~eI~~aN~~Dl~~a~~~g~~~~~idRL~l~~~~ri~~~~   81 (436)
T d1vlua_           4 SSQQIAKNARKAGN--ILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVML   81 (436)
T ss_dssp             HHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHH
T ss_pred             HHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHcCCcHHHHHHHhcCchHHHHHHH
Confidence            56788999999999  99999999999999999999999999998853      44556543211 0     01244445


Q ss_pred             HHHHHHHHhhhHhcCcc--cCCCCCcceEEEeeccceEEEEccCCchHHHHHhHHHHHhhcCCEEEEecCCCchHHHHHH
Q 012806          164 RLLHYYAGWADKIHGLT--VPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYV  241 (456)
Q Consensus       164 ~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l  241 (456)
                      +.++..+...+......  ...+.+...+..+.|+||+++| |||+| ..+++..++||++||+|||||++.++.++..+
T Consensus        82 ~~l~~i~~~~dpvg~~~~~~~~~~gl~~~~~~~P~GVigiI-~e~~P-~vt~~~~~lalksGNavIlk~~~~a~~s~~~l  159 (436)
T d1vlua_          82 QGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVI-FESRP-EVIANITALSIKSGNAAILKGGKESVNTFREM  159 (436)
T ss_dssp             HHHHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEE-ESSCT-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHH
T ss_pred             HHHHHHHhccccceeEeeeeeccccceEEEeeeeeeeeecc-ccccc-hhhhhhhhcccccCCcceecCCcccccCHHHH
Confidence            55555554333221111  1133456678888999999988 67778 66678889999999999999999999999888


Q ss_pred             HHHHH--------HcCCCCCcEEEEeCCchhhHHHHhcCCCccEEEEecChhHHHHHHHHHhhCCCccEEEecCCCCceE
Q 012806          242 AKLFH--------EAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFI  313 (456)
Q Consensus       242 ~~ll~--------~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~lelgG~~~~i  313 (456)
                      +++++        ++|+|+++++++++ +.+++..|..|++||.|.||||...++.+.+.    ..+|++.++||++|+|
T Consensus       160 ~~~~~~al~~a~~~aGlP~~~i~~v~~-~~~v~~~l~~~~~Id~ii~tGg~~lv~~v~~~----~~~pvi~~~~G~~~~~  234 (436)
T d1vlua_         160 AKIVNDTIAQFQSETGVPVGSVQLIET-RQDVSDLLDQDEYIDLVVPRGSNALVRKIKDT----TKIPVLGHADGICSIY  234 (436)
T ss_dssp             HHHHHHHHHHHHHHHCCCTTSEEECCC-C--CGGGGGCTTTCCEEEEESCHHHHHHHHHT----CCSCBTTBCSCCEEEE
T ss_pred             HHHHHHhhhhhccccCCCCceEEEecc-hhHHHHHhccCCCCceEEEecCCceeeeeecc----ccceEEEecCCcccee
Confidence            77764        56999999999987 56788999999999999999998888777553    3359999999999999


Q ss_pred             EcCCCCHHHHHHHHHHHhhhcCCCccccCcccccccccHHHHHHHHHHHHhhhhcCCCCCCCCccCCCCCHHHHHHHHHH
Q 012806          314 IFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFQKVLRY  393 (456)
Q Consensus       314 V~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~  393 (456)
                      |++|||+|+|++.++.++|.+.|| |++.++++||+++++.|...+....+.   |      ..+.  .++....    .
T Consensus       235 Vd~~ADl~~A~~~i~~ak~~~~g~-C~a~e~llV~e~ia~~~~~~~~~~~~~---g------v~l~--~~~~~~~----~  298 (436)
T d1vlua_         235 LDEDADLIKAKRISLDAKTNYPAG-CNAMETLLINPKFSKWWEVLENLTLEG---G------VTIH--ATKDLKT----A  298 (436)
T ss_dssp             ECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTSTTHHHHHHHHHHHH---C------CCBE--ECHHHHH----H
T ss_pred             ecccccHHHHHHHHHHHhccCCCc-cccccceeecHhhhhhhhhhHHHHHhC---C------cEEE--eCHHHHH----H
Confidence            999999999999999999999997 888999999999988876555443332   1      1111  1222222    2


Q ss_pred             HHHHHHcCCeEEeCCcccCCCCceEecEEEecCCCChHhhhccccceEEeEEEccccccccc
Q 012806          394 IRSGIESNATLECGGDRLGNRGYFVQPTVFSDVTVSFISLLQFLIPIFSFIILCVVTDCTSI  455 (456)
Q Consensus       394 i~~a~~~Ga~v~~gg~~~~~~g~~i~PtVl~~v~~~~~~~~~~fgPv~~vv~~~~~~eai~~  455 (456)
                      ......++      |.   ..+....|++....+.++  -.|.|+|+++|+.++|.||||++
T Consensus       299 ~~~~~~~~------~~---~~~~~~~~~~~~~~~~d~--~~E~l~pvl~v~~v~~~eEAI~~  349 (436)
T d1vlua_         299 YFDKLNEL------GK---LTEAIQCKTVDADEEQDF--DKEFLSLDLAAKFVTSTESAIQH  349 (436)
T ss_dssp             HHHHHHHH------TC---CCHHHHTTBC---------------CCCCEEEECCSHHHHHHH
T ss_pred             hhhhhhhc------cc---ccccccccccCCCcccch--hhhhhCcceeEEEECCHHHHHHH
Confidence            11111111      11   012233344443333333  23599999999999999999975

>d1k75a_ c.82.1.2 (A:) L-histidinol dehydrogenase HisD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: L-histidinol dehydrogenase HisD
domain: L-histidinol dehydrogenase HisD
species: Escherichia coli [TaxId: 562]

Probab=85.75  E-value=14  Score=34.39  Aligned_cols=231  Identities=15%  Similarity=0.087  Sum_probs=125.0

Q ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHHHhcCC-Chhh--hhhccHHHHH--------HHHHHHHHhhhHhcCcccC-----
Q 012806          119 YERSRIMLRAADLIEKNMEELAALETWNNGK-PYVQ--SLKSEVPMVV--------RLLHYYAGWADKIHGLTVP-----  182 (456)
Q Consensus       119 ~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk-~~~~--a~~~ev~~~~--------~~l~~~~~~~~~~~~~~~~-----  182 (456)
                      ++-.+...++.+.++++.|.-..-.++...+ ....  ....|+..+.        +.++........++....+     
T Consensus        27 ~~v~~~V~~Ii~~Vr~~GD~AL~~yt~kFD~~~~~~l~Vs~~Ei~~A~~~l~~el~~AI~~A~~rI~~FH~~Q~~~~~~~  106 (431)
T d1k75a_          27 ESITRTVNDILDNVKARGDEALREYSAKFDKTTVTALKVSAEEIAAASERLSDELKQAMAVAVKNIETFHTAQKLPPVDV  106 (431)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCCSCSBCCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTCCCCEEE
T ss_pred             HHHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCccccccCHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhhcCCCcee
Confidence            3344555666666666766655544554331 1110  0112443332        2233333333333322221     


Q ss_pred             -CCCCcceEEEeeccceEEEEccCC-chH-HHHHhHHHHHhhcCCEEE--EecCCCchHHHHHHHHHHHHcCCCCCcEEE
Q 012806          183 -GDGNYHIQTLHEPIGVAGQIVPWN-FPL-LLFTWKVAPALTCGNTIV--LKSAEQTPLTALYVAKLFHEAGLPPGVLNV  257 (456)
Q Consensus       183 -~~~~~~~~~~~~P~Gvv~~i~p~N-~P~-~~~~~~~~~ALaaGN~vv--lKps~~~p~~~~~l~~ll~~aGlP~g~v~v  257 (456)
                       ...+......+.|+--|++-.|.- +|+ .+.+..++||-.+|+.=|  .-|+...|.    +.-..+.+|+.    .+
T Consensus       107 e~~~Gv~~g~~~~PI~~VGlYVPGG~A~ypSsvLM~aiPAkvAGV~~Ivv~tPp~~~~~----~l~aa~~~Gv~----~i  178 (431)
T d1k75a_         107 ETQPGVRCQQVTRPVASVGLYIPGGSAPLFSTVLMLATPASIAGCKKVVLCSPPPIADE----ILYAAQLCGVQ----DV  178 (431)
T ss_dssp             EEETTEEEEEEEEECSEEEEECCCSSSCCHHHHHHHHHHHHHHTCSEEEEEECSSCCHH----HHHHHHHTTCC----EE
T ss_pred             eccCCceeeeeeeehhhheeeccCCCccchHHHHHHHHHHHhcCCCceeEEeCCCCcch----HHHHHHHcCcc----ce
Confidence             123556778888999999999954 333 344666889999998654  445544443    33444667655    34


Q ss_pred             EeCCchhhHHHHh----cCCCccEEEEecChhHHHHHHHHHhhCCCccEEEe-cCCCCceE--EcCCCCHHHHHHHHHHH
Q 012806          258 VSGYGPTAGAALA----SHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLE-LGGKSPFI--IFDDADVDQAVELAHFA  330 (456)
Q Consensus       258 v~g~~~~~~~~L~----~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~v~le-lgG~~~~i--V~~daD~d~aa~~i~~~  330 (456)
                      ..-.|.+.-.+|.    +-+.||+|+=.|+.-+...=.+....  .-.+-.+ +-|.+=++  -++++|.+.++..++.-
T Consensus       179 y~~GGaqAIAAlAyGT~ti~~VdkI~GPGN~yV~~AK~~v~g~--~~~vgID~~aGPSEv~viAD~~a~p~~iAaDllaQ  256 (431)
T d1k75a_         179 FNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQR--LDGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQ  256 (431)
T ss_dssp             EECCHHHHHHHHHHCCSSSCCCSEEECCCSHHHHHHHHHHHHS--TTSCEESCCCCCCEEEEEECTTSCHHHHHHHHHHH
T ss_pred             EecCChHHHHHHhhccCcccccceeecCCchhhhhhHHhhccc--CCccccccccCCceEEEEecCCCCHHHHHHHHHhc
Confidence            4433666555554    25789999999987654432222221  1112222 23555433  35568999998888777


Q ss_pred             hhhcCCCccccCcccccccc--cHHHHHHHHHHHHh
Q 012806          331 LFYNQGQCCCAGSRTYVHER--VYDEFVEKAKARAM  364 (456)
Q Consensus       331 ~~~~~GQ~C~a~~~v~V~~~--v~~~f~~~l~~~~~  364 (456)
                      +=....-.     -++|..+  ..+++.+.+.+++.
T Consensus       257 AEH~~~a~-----~ilvt~~~~l~~~v~~~i~~~l~  287 (431)
T d1k75a_         257 AEHGPDSQ-----VILLTPAADMARRVAEAVERQLA  287 (431)
T ss_dssp             HTTCTTCE-----EEEEESCHHHHHHHHHHHHHHHH
T ss_pred             cCCcccce-----eEEEeccHHHHHHHHHHHHHHhh
Confidence            66555422     3556544  34555555555544