Citrus Sinensis ID: 012820


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450------
MMISSMDSQEVWELENGGHIDSSSKEIIRNNNNNDNSNEAAKTTQIVSTPIMRKKSDPLLPSNVRFRILREFLANLQEVILGTRLALLFPAVPLAVIARLNNFGRPWVFALSLLGLAPLAERVSFLTEQIAYFTGPTVGGLMNATCGNATELIIALFALYENKIHVLKYSLLGSVLSNLLLVLGTSLLCGGLANIREEQRYDRKQADVNSLLLLLGLLCQMLPLLFRYAAEPGTFPADSILQLSRASSILMLLAYVAYIFFQLKTHRKLFESQEEDEDEDEEKAVIGFWSAFSWLVGMTAIIAVLSEYVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAFKNKLDISLGVALGSATQISMFVVPLCVVIAWIIGVYMDLDFSLLETGSLAFTIIIVAFTLQDGTSHYMKGVVLFLCYIAIAACFFVHKIPQSTANMGTKPSLGVSAA
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHccccHHHHHHHHHHHHccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccc
ccccccccccccEHccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcHHHEHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccccEEEEHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHEEHHHHccHHHHHHHHHHHHHcHccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccc
mmissmdsqevwelengghidsssKEIIRNnnnndnsneaakttqivstpimrkksdpllpsnvRFRILREFLANLQEVILGTRLALLFPAVPLAVIARLNNFGRPWVFALSLLGLAPLAERVSFLTEQIAYftgptvgglmnatcgNATELIIALFALYENKIHVLKYSLLGSVLSNLLLVLGTSLlcgglanireeqrydrkqADVNSLLLLLGLLCQMLPLLFRyaaepgtfpadsiLQLSRASSILMLLAYVAYIFFQLKTHRKLFesqeedededeEKAVIGFWSAFSWLVGMTAIIAVLSEYVVGTIEaasdswgisVSFISIILLpivgnaaeHAGSIIFAFKNKLDISLGVALGSATQISMFVVPLCVVIAWIIGVYMDldfslletgSLAFTIIIVAFTLQDGTSHYMKGVVLFLCYIAIAACFfvhkipqstanmgtkpslgvsaa
MMISSMDSQEVWELengghidssSKEIIRnnnnndnsneaakttqivstpimrkksdpllpsNVRFRILREFLANLQEVILGTRLALLFPAVPLAVIARLNNFGRPWVFALSLLGLAPLAERVSFLTEQIAYFTGPTVGGLMNATCGNATELIIALFALYENKIHVLKYSLLGSVLSNLLLVLGTSLLCGGLANIREEQRYDRKQADVNSLLLLLGLLCQMLPLLFRYAAEPGTFPADSILQLSRASSILMLLAYVAYIFFQLKTHRKLFESQEEDEDEDEEKAVIGFWSAFSWLVGMTAIIAVLSEYVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAFKNKLDISLGVALGSATQISMFVVPLCVVIAWIIGVYMDLDFSLLETGSLAFTIIIVAFTLQDGTSHYMKGVVLFLCYIAIAACFFVHKIPQStanmgtkpslgvsaa
MMISSMDSQEVWELENGGHIDSSSKEIIRnnnnndnsnEAAKTTQIVSTPIMRKKSDPLLPSNVRFRILREFLANLQEVILGTRlallfpavplaviaRLNNFGRPWVFALSLLGLAPLAERVSFLTEQIAYFTGPTVGGLMNATCGNATELIIALFALYENKIHVLKYsllgsvlsnlllvlgtsllcgglANIREEQRYDRKQADVNSlllllgllcqmlpllFRYAAEPGTFPADSILQLSRASSILMLLAYVAYIFFQLKTHRKLFESQeedededeeKAVIGFWSAFSWLVGMTAIIAVLSEYVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAFKNKLDISLGVALGSATQISMFVVPLCVVIAWIIGVYMDLDFSLLETGSLAFTIIIVAFTLQDGTSHYMKGVVLFLCYIAIAACFFVHKIPQSTANMGTKPSLGVSAA
***********************************************************LPSNVRFRILREFLANLQEVILGTRLALLFPAVPLAVIARLNNFGRPWVFALSLLGLAPLAERVSFLTEQIAYFTGPTVGGLMNATCGNATELIIALFALYENKIHVLKYSLLGSVLSNLLLVLGTSLLCGGLANIREEQRYDRKQADVNSLLLLLGLLCQMLPLLFRYAAEPGTFPADSILQLSRASSILMLLAYVAYIFFQLKTHRKL***************VIGFWSAFSWLVGMTAIIAVLSEYVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAFKNKLDISLGVALGSATQISMFVVPLCVVIAWIIGVYMDLDFSLLETGSLAFTIIIVAFTLQDGTSHYMKGVVLFLCYIAIAACFFVHKI******************
*******************************************************************ILREFLANLQEVILGTRLALLFPAVPLAVIARLNNFGRPWVFALSLLGLAPLAERVSFLTEQIAYFTGPTVGGLMNATCGNATELIIALFALYENKIHVLKYSLLGSVLSNLLLVLGTSLLCGGLANIREEQRYDRKQADVNSLLLLLGLLCQMLPLLFRYAAEPGTFPADSILQLSRASSILMLLAYVAYIFFQLKTHRKLFESQEEDEDEDEEKAVIGFWSAFSWLVGMTAIIAVLSEYVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAFKNKLDISLGVALGSATQISMFVVPLCVVIAWIIGVYMDLDFSLLETGSLAFTIIIVAFTLQDGTSHYMKGVVLFLCYIAIAACFFVHKIP*****************
***********WELENGGHIDSSSKEIIRNNNNNDNSNEAAKTTQIVSTPIMRKKSDPLLPSNVRFRILREFLANLQEVILGTRLALLFPAVPLAVIARLNNFGRPWVFALSLLGLAPLAERVSFLTEQIAYFTGPTVGGLMNATCGNATELIIALFALYENKIHVLKYSLLGSVLSNLLLVLGTSLLCGGLANIREEQRYDRKQADVNSLLLLLGLLCQMLPLLFRYAAEPGTFPADSILQLSRASSILMLLAYVAYIFFQLKTHRKL*************KAVIGFWSAFSWLVGMTAIIAVLSEYVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAFKNKLDISLGVALGSATQISMFVVPLCVVIAWIIGVYMDLDFSLLETGSLAFTIIIVAFTLQDGTSHYMKGVVLFLCYIAIAACFFVHKIPQSTANMGTKPSLGVSAA
***********************************************************LPSNVRFRILREFLANLQEVILGTRLALLFPAVPLAVIARLNNFGRPWVFALSLLGLAPLAERVSFLTEQIAYFTGPTVGGLMNATCGNATELIIALFALYENKIHVLKYSLLGSVLSNLLLVLGTSLLCGGLANIREEQRYDRKQADVNSLLLLLGLLCQMLPLLFRYAAEPGTFPADSILQLSRASSILMLLAYVAYIFFQLKTHRKLFESQ**********AVIGFWSAFSWLVGMTAIIAVLSEYVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAFKNKLDISLGVALGSATQISMFVVPLCVVIAWIIGVYMDLDFSLLETGSLAFTIIIVAFTLQDGTSHYMKGVVLFLCYIAIAACFFVHKIP*****************
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiii
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MMISSMDSQEVWELENGGHIDSSSKEIIRNNNNNDNSNEAAKTTQIVSTPIMRKKSDPLLPSNVRFRILREFLANLQEVILGTRLALLFPAVPLAVIARLNNFGRPWVFALSLLGLAPLAERVSFLTEQIAYFTGPTVGGLMNATCGNATELIIALFALYENKIHVLKYSLLGSVLSNLLLVLGTSLLCGGLANIREEQRYDRKQADVNSLLLLLGLLCQMLPLLFRYAAEPGTFPADSILQLSRASSILMLLAYVAYIFFQLKTHRKLFESQEEDEDEDEEKAVIGFWSAFSWLVGMTAIIAVLSEYVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAFKNKLDISLGVALGSATQISMFVVPLCVVIAWIIGVYMDLDFSLLETGSLAFTIIIVAFTLQDGTSHYMKGVVLFLCYIAIAACFFVHKIPQSTANMGTKPSLGVSAA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query456 2.2.26 [Sep-21-2011]
Q39253463 Vacuolar cation/proton ex yes no 0.877 0.863 0.660 1e-150
Q93Z81459 Vacuolar cation/proton ex no no 0.912 0.906 0.667 1e-149
Q769E5451 Vacuolar cation/proton ex yes no 0.885 0.895 0.662 1e-141
Q945S5446 Vacuolar cation/proton ex no no 0.914 0.934 0.553 1e-137
Q5TKG3453 Vacuolar cation/proton ex no no 0.804 0.810 0.641 1e-125
Q5KTQ9450 Vacuolar cation/proton ex no no 0.835 0.846 0.592 1e-115
Q8L783441 Vacuolar cation/proton ex no no 0.918 0.950 0.472 1e-102
Q39254441 Vacuolar cation/proton ex no no 0.901 0.931 0.465 1e-101
Q6K1C4417 Vacuolar cation/proton ex no no 0.822 0.899 0.476 2e-95
Q5KQN0437 Vacuolar cation/proton ex no no 0.820 0.855 0.502 4e-95
>sp|Q39253|CAX1_ARATH Vacuolar cation/proton exchanger 1 OS=Arabidopsis thaliana GN=CAX1 PE=1 SV=3 Back     alignment and function desciption
 Score =  531 bits (1367), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 269/407 (66%), Positives = 328/407 (80%), Gaps = 7/407 (1%)

Query: 41  AKTTQIVSTPIMRKKSDPLLPSNVRFRILREFLANLQEVILGTRLALLFPAVPLAVIARL 100
            +T   +S+  +RKKSD  +   V ++ L++FL+NLQEVILGT+LA+LFPA+P A+I   
Sbjct: 31  GRTAHNMSSSSLRKKSDLRVIQKVPYKGLKDFLSNLQEVILGTKLAILFPAIPAAIICTY 90

Query: 101 NNFGRPWVFALSLLGLAPLAERVSFLTEQIAYFTGPTVGGLMNATCGNATELIIALFALY 160
               +PW+F LSLLGL PLAERVSFLTEQ+A++TGPT+GGL+NATCGNATELIIA+ AL 
Sbjct: 91  CGVSQPWIFGLSLLGLTPLAERVSFLTEQLAFYTGPTLGGLLNATCGNATELIIAILALT 150

Query: 161 ENKIHVLKYSLLGSVLSNLLLVLGTSLLCGGLANIREEQRYDRKQADVNSLLLLLGLLCQ 220
            NK+ V+KYSLLGS+LSNLLLVLGTSL CGG+ANIR EQR+DRKQADVN  LLLLG LC 
Sbjct: 151 NNKVAVVKYSLLGSILSNLLLVLGTSLFCGGIANIRREQRFDRKQADVNFFLLLLGFLCH 210

Query: 221 MLPLLFRY---AAEPGTFPADSILQLSRASSILMLLAYVAYIFFQLKTHRKLFESQEE-- 275
           +LPLL  Y           +D  L +SR  SI+ML++Y+AY+ FQL THR+LF++QE+  
Sbjct: 211 LLPLLVGYLKNGEASAAVLSDMQLSISRGFSIVMLISYIAYLVFQLWTHRQLFDAQEQED 270

Query: 276 --DEDEDEEKAVIGFWSAFSWLVGMTAIIAVLSEYVVGTIEAASDSWGISVSFISIILLP 333
             D+D ++E AVI FWS F+WLVGMT +IA+LSEYVV TIE ASD W +SVSFISIILLP
Sbjct: 271 EYDDDVEQETAVISFWSGFAWLVGMTLVIALLSEYVVATIEEASDKWNLSVSFISIILLP 330

Query: 334 IVGNAAEHAGSIIFAFKNKLDISLGVALGSATQISMFVVPLCVVIAWIIGVYMDLDFSLL 393
           IVGNAAEHAG++IFAFKNKLDISLGVALGSATQI +FVVPL +++AWI+G+ MDL+F  L
Sbjct: 331 IVGNAAEHAGAVIFAFKNKLDISLGVALGSATQIGLFVVPLTIIVAWILGINMDLNFGPL 390

Query: 394 ETGSLAFTIIIVAFTLQDGTSHYMKGVVLFLCYIAIAACFFVHKIPQ 440
           ETG LA +III AFTLQDG+SHYMKG+VL LCY  IA CFFV K+PQ
Sbjct: 391 ETGCLAVSIIITAFTLQDGSSHYMKGLVLLLCYFIIAICFFVDKLPQ 437




Vacuolar cation/proton exchanger (CAX). Translocates Ca(2+) and other metal ions into vacuoles using the proton gradient formed by H(+)-ATPase and H(+)-pyrophosphatase. Involved in ion homeostasis in association with CAX3. May play a role in cold-acclimation response.
Arabidopsis thaliana (taxid: 3702)
>sp|Q93Z81|CAX3_ARATH Vacuolar cation/proton exchanger 3 OS=Arabidopsis thaliana GN=CAX3 PE=1 SV=1 Back     alignment and function description
>sp|Q769E5|CAX1A_ORYSJ Vacuolar cation/proton exchanger 1a OS=Oryza sativa subsp. japonica GN=CAX1a PE=1 SV=1 Back     alignment and function description
>sp|Q945S5|CAX4_ARATH Vacuolar cation/proton exchanger 4 OS=Arabidopsis thaliana GN=CAX4 PE=1 SV=2 Back     alignment and function description
>sp|Q5TKG3|CAX1B_ORYSJ Vacuolar cation/proton exchanger 1b OS=Oryza sativa subsp. japonica GN=CAX1b PE=2 SV=1 Back     alignment and function description
>sp|Q5KTQ9|CAX1C_ORYSJ Vacuolar cation/proton exchanger 1c OS=Oryza sativa subsp. japonica GN=CAX1c PE=2 SV=1 Back     alignment and function description
>sp|Q8L783|CAX5_ARATH Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana GN=CAX5 PE=2 SV=1 Back     alignment and function description
>sp|Q39254|CAX2_ARATH Vacuolar cation/proton exchanger 2 OS=Arabidopsis thaliana GN=CAX2 PE=1 SV=2 Back     alignment and function description
>sp|Q6K1C4|CAX3_ORYSJ Vacuolar cation/proton exchanger 3 OS=Oryza sativa subsp. japonica GN=CAX3 PE=2 SV=2 Back     alignment and function description
>sp|Q5KQN0|CAX2_ORYSJ Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica GN=CAX2 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query456
224054546402 Ca2+ antiporter/cation exchanger [Populu 0.877 0.995 0.827 1e-177
297745901446 unnamed protein product [Vitis vinifera] 0.934 0.955 0.770 1e-177
359478849436 PREDICTED: vacuolar cation/proton exchan 0.942 0.986 0.764 1e-177
224104278401 Ca2+ antiporter/cation exchanger [Populu 0.875 0.995 0.825 1e-175
255569343439 Vacuolar cation/proton exchanger 1a, put 0.949 0.986 0.794 1e-174
255574373449 Vacuolar cation/proton exchanger 1a, put 0.967 0.982 0.687 1e-170
356506617451 PREDICTED: vacuolar cation/proton exchan 0.934 0.944 0.663 1e-168
357490695435 Vacuolar cation/proton exchanger [Medica 0.918 0.963 0.748 1e-166
356496231456 PREDICTED: vacuolar cation/proton exchan 0.888 0.888 0.691 1e-164
356551863440 PREDICTED: vacuolar cation/proton exchan 0.875 0.906 0.771 1e-164
>gi|224054546|ref|XP_002298314.1| Ca2+ antiporter/cation exchanger [Populus trichocarpa] gi|222845572|gb|EEE83119.1| Ca2+ antiporter/cation exchanger [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  628 bits (1620), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 332/401 (82%), Positives = 368/401 (91%), Gaps = 1/401 (0%)

Query: 41  AKTTQIVSTPIMRKKSDPLL-PSNVRFRILREFLANLQEVILGTRLALLFPAVPLAVIAR 99
            KT Q +S+ I+R KSDP+L  S+ RF++L  FL NLQEVILGT+LA+LFPA+PLA+ A 
Sbjct: 2   GKTPQNISSSILRNKSDPMLVSSSARFQMLWHFLTNLQEVILGTKLAVLFPAIPLAIAAD 61

Query: 100 LNNFGRPWVFALSLLGLAPLAERVSFLTEQIAYFTGPTVGGLMNATCGNATELIIALFAL 159
              FGRPW+FALSLLGL PLAERVSFLTEQIAYFTGPTVGGL+NATCGNATELIIALFAL
Sbjct: 62  YYKFGRPWIFALSLLGLTPLAERVSFLTEQIAYFTGPTVGGLLNATCGNATELIIALFAL 121

Query: 160 YENKIHVLKYSLLGSVLSNLLLVLGTSLLCGGLANIREEQRYDRKQADVNSLLLLLGLLC 219
           Y+NKIHVLKYSLLGS+LSNLLLVLGTSLLCGGLAN++ EQRYDRKQADVNSLLLLLGLLC
Sbjct: 122 YQNKIHVLKYSLLGSILSNLLLVLGTSLLCGGLANLKREQRYDRKQADVNSLLLLLGLLC 181

Query: 220 QMLPLLFRYAAEPGTFPADSILQLSRASSILMLLAYVAYIFFQLKTHRKLFESQEEDEDE 279
            MLPL+FRYA   GT  A SILQLSR SSI+ML+AYVAYIFFQLKTHR+LF++QEE++D+
Sbjct: 182 HMLPLMFRYAIGEGTATACSILQLSRVSSIVMLIAYVAYIFFQLKTHRQLFDAQEEEDDD 241

Query: 280 DEEKAVIGFWSAFSWLVGMTAIIAVLSEYVVGTIEAASDSWGISVSFISIILLPIVGNAA 339
           +EEKAVIGFWSAF+WL GMT IIA+LSEYVVGTIEAASDSWGISVSFISIILLPIVGNAA
Sbjct: 242 EEEKAVIGFWSAFTWLAGMTIIIALLSEYVVGTIEAASDSWGISVSFISIILLPIVGNAA 301

Query: 340 EHAGSIIFAFKNKLDISLGVALGSATQISMFVVPLCVVIAWIIGVYMDLDFSLLETGSLA 399
           EHAGSIIFAFKNKLDISLGVALGSA+QISMFVVPLCV++AW + + MDLDFSLLETGSLA
Sbjct: 302 EHAGSIIFAFKNKLDISLGVALGSASQISMFVVPLCVIVAWTMHIRMDLDFSLLETGSLA 361

Query: 400 FTIIIVAFTLQDGTSHYMKGVVLFLCYIAIAACFFVHKIPQ 440
           FTIII AFTLQDGTSHYMKG++LFLCYI IAACFFVHKIPQ
Sbjct: 362 FTIIITAFTLQDGTSHYMKGMLLFLCYIVIAACFFVHKIPQ 402




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297745901|emb|CBI15957.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359478849|ref|XP_002279135.2| PREDICTED: vacuolar cation/proton exchanger 3-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|224104278|ref|XP_002313381.1| Ca2+ antiporter/cation exchanger [Populus trichocarpa] gi|222849789|gb|EEE87336.1| Ca2+ antiporter/cation exchanger [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255569343|ref|XP_002525639.1| Vacuolar cation/proton exchanger 1a, putative [Ricinus communis] gi|223535075|gb|EEF36757.1| Vacuolar cation/proton exchanger 1a, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|255574373|ref|XP_002528100.1| Vacuolar cation/proton exchanger 1a, putative [Ricinus communis] gi|223532489|gb|EEF34279.1| Vacuolar cation/proton exchanger 1a, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356506617|ref|XP_003522074.1| PREDICTED: vacuolar cation/proton exchanger 3-like [Glycine max] Back     alignment and taxonomy information
>gi|357490695|ref|XP_003615635.1| Vacuolar cation/proton exchanger [Medicago truncatula] gi|355516970|gb|AES98593.1| Vacuolar cation/proton exchanger [Medicago truncatula] Back     alignment and taxonomy information
>gi|356496231|ref|XP_003516972.1| PREDICTED: vacuolar cation/proton exchanger 3-like [Glycine max] Back     alignment and taxonomy information
>gi|356551863|ref|XP_003544292.1| PREDICTED: vacuolar cation/proton exchanger 1-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query456
TAIR|locus:2074348459 CAX3 "cation exchanger 3" [Ara 0.894 0.888 0.581 3.8e-117
TAIR|locus:2020462441 CAX5 "cation exchanger 5" [Ara 0.728 0.752 0.474 8.4e-74
TAIR|locus:2088130441 CAX2 "cation exchanger 2" [Ara 0.728 0.752 0.469 4.6e-73
ASPGD|ASPL0000052404434 vcxA [Emericella nidulans (tax 0.712 0.748 0.330 5.2e-49
UNIPROTKB|G4NIP8611 MGG_04159 "Calcium-proton exch 0.335 0.250 0.398 3.1e-48
SGD|S000002286411 VCX1 "Vacuolar membrane antipo 0.736 0.817 0.328 9.8e-48
CGD|CAL0005539416 VCX1 [Candida albicans (taxid: 0.302 0.331 0.413 1.6e-47
POMBASE|SPCC1795.02c412 vcx1 "CaCA proton/calcium exch 0.717 0.793 0.299 1.4e-46
ASPGD|ASPL0000065939742 AN7173 [Emericella nidulans (t 0.337 0.207 0.445 7.8e-46
UNIPROTKB|G4NFU3782 MGG_08710 "Vacuolar calcium io 0.307 0.179 0.450 8.4e-46
TAIR|locus:2074348 CAX3 "cation exchanger 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1154 (411.3 bits), Expect = 3.8e-117, P = 3.8e-117
 Identities = 243/418 (58%), Positives = 292/418 (69%)

Query:    42 KTTQIVSTPIMRKKSDPLLPSNVRFRILREFLANLQEVILGTRXXXXXXXXXXXXXXRLN 101
             +T   +S+  +RKKSD  L   V  + L+  L+NLQEVILGT+                 
Sbjct:    32 RTAHNMSSSSLRKKSDLRLVQKVPCKTLKNILSNLQEVILGTKLTLLFLAIPLAILANSY 91

Query:   102 NFGRPWVFALSLLGLAPLAERVSFLTEQIAYFTGPTVGGLMNATCGNATELIIALFALYE 161
             N+GRP +F LSL+GL PLAERVSFLTEQ+A++TGPTVGGL+NATCGNATELIIA+ AL  
Sbjct:    92 NYGRPLIFGLSLIGLTPLAERVSFLTEQLAFYTGPTVGGLLNATCGNATELIIAILALAN 151

Query:   162 NKIHVLKYXXXXXXXXXXXXXXXXXXXXXXXANIREEQRYDRKQADVNSXXXXXXXXXXX 221
             NK+ V+KY                       ANIR EQR+DRKQADVN            
Sbjct:   152 NKVAVVKYSLLGSILSNLLLVLGTSLFFGGIANIRREQRFDRKQADVNFFLLLMGLLCHL 211

Query:   222 XXXXFRYAA--EPGTFPADSI-LQLSRASSILMLLAYVAYIFFQLKTHRKLFESQXXXXX 278
                  +YAA  E  T   + + L LSR SSI+ML+AY+AY+ FQL THR+LFE+Q     
Sbjct:   212 LPLLLKYAATGEVSTSMINKMSLTLSRTSSIVMLIAYIAYLIFQLWTHRQLFEAQQDDDD 271

Query:   279 XXXXKA------VIGFWSAFSWLVGMTAIIAVLSEYVVGTIEAASDSWGISVSFISIILL 332
                 +       VIGFWS F+WLVGMT +IA+LSEYVV TIE ASDSWG+SVSFISIILL
Sbjct:   272 AYDDEVSVEETPVIGFWSGFAWLVGMTIVIALLSEYVVDTIEDASDSWGLSVSFISIILL 331

Query:   333 PIVGNAAEHAGSIIFAFKNKLDISLGVALGSATQISMFVVPLCVVIAWIIGVYMDLDFSL 392
             PIVGNAAEHAG+IIFAFKNKLDISLGVALGSATQIS+FVVPL V++AWI+G+ MDL+F++
Sbjct:   332 PIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQISLFVVPLSVIVAWILGIKMDLNFNI 391

Query:   393 LETGSLAFTIIIVAFTLQDGTSHYMKGVVLFLCYIAIAACFFVHKIPQ-STANMGTKP 449
             LET SLA  III AFTLQDGTSHYMKG+VL LCY+ IAACFFV +IPQ +  ++G +P
Sbjct:   392 LETSSLALAIIITAFTLQDGTSHYMKGLVLLLCYVIIAACFFVDQIPQPNDLDVGLQP 449




GO:0006812 "cation transport" evidence=IEA;ISS
GO:0008324 "cation transmembrane transporter activity" evidence=IEA
GO:0015368 "calcium:cation antiporter activity" evidence=ISS
GO:0015491 "cation:cation antiporter activity" evidence=ISS;NAS
GO:0016021 "integral to membrane" evidence=IEA
GO:0055085 "transmembrane transport" evidence=IEA
GO:0009705 "plant-type vacuole membrane" evidence=IDA
GO:0015369 "calcium:hydrogen antiporter activity" evidence=ISS;IMP;IDA
GO:0005773 "vacuole" evidence=IDA
GO:0005774 "vacuolar membrane" evidence=IDA
GO:0006793 "phosphorus metabolic process" evidence=IGI
GO:0006814 "sodium ion transport" evidence=IGI
GO:0006874 "cellular calcium ion homeostasis" evidence=IGI
GO:0006882 "cellular zinc ion homeostasis" evidence=IGI;RCA
GO:0010351 "lithium ion transport" evidence=IGI
GO:0030026 "cellular manganese ion homeostasis" evidence=IGI
GO:0051592 "response to calcium ion" evidence=IMP
GO:0009624 "response to nematode" evidence=IEP;RCA
GO:0005515 "protein binding" evidence=IPI
GO:0055062 "phosphate ion homeostasis" evidence=IGI
GO:0006816 "calcium ion transport" evidence=RCA
TAIR|locus:2020462 CAX5 "cation exchanger 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2088130 CAX2 "cation exchanger 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ASPGD|ASPL0000052404 vcxA [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
UNIPROTKB|G4NIP8 MGG_04159 "Calcium-proton exchanger" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
SGD|S000002286 VCX1 "Vacuolar membrane antiporter with Ca2+/H+ and K+/H+ exchange activity" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
CGD|CAL0005539 VCX1 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
POMBASE|SPCC1795.02c vcx1 "CaCA proton/calcium exchanger (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
ASPGD|ASPL0000065939 AN7173 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
UNIPROTKB|G4NFU3 MGG_08710 "Vacuolar calcium ion transporter" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q39253CAX1_ARATHNo assigned EC number0.66090.87710.8639yesno
O59768VCX1_SCHPONo assigned EC number0.34350.83990.9296yesno
Q769E5CAX1A_ORYSJNo assigned EC number0.66260.88590.8957yesno
Q99385VCX1_YEASTNo assigned EC number0.36430.86620.9610yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
gw1.I.911.1
Ca2+ antiporter/cation exchanger (402 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query456
TIGR00846365 TIGR00846, caca2, calcium/proton exchanger 1e-143
TIGR00378349 TIGR00378, cax, calcium/proton exchanger (cax) 8e-87
COG0387368 COG0387, ChaA, Ca2+/H+ antiporter [Inorganic ion t 5e-76
pfam01699135 pfam01699, Na_Ca_ex, Sodium/calcium exchanger prot 8e-23
COG0530320 COG0530, ECM27, Ca2+/Na+ antiporter [Inorganic ion 4e-19
pfam01699135 pfam01699, Na_Ca_ex, Sodium/calcium exchanger prot 1e-11
TIGR00367307 TIGR00367, TIGR00367, K+-dependent Na+/Ca+ exchang 9e-09
COG0530 320 COG0530, ECM27, Ca2+/Na+ antiporter [Inorganic ion 1e-06
PRK10734325 PRK10734, PRK10734, putative calcium/sodium:proton 3e-05
PRK10599366 PRK10599, PRK10599, calcium/sodium:proton antiport 0.002
>gnl|CDD|129926 TIGR00846, caca2, calcium/proton exchanger Back     alignment and domain information
 Score =  413 bits (1064), Expect = e-143
 Identities = 207/370 (55%), Positives = 269/370 (72%), Gaps = 10/370 (2%)

Query: 70  REFLANLQEVILGTRLALLFPAVPLAVIARLNNFGRPWVFALSLLGLAPLAERVSFLTEQ 129
           +  L+ LQEVILG+ L +L   VP A+I  L  + +  +F L+LLG+ PLAERVSF TEQ
Sbjct: 1   KYRLSVLQEVILGSWLNILLIFVPAAIILGLWGWSQTVIFLLNLLGIIPLAERVSFATEQ 60

Query: 130 IAYFTGPTVGGLMNATCGNATELIIALFALYENKIHVLKYSLLGSVLSNLLLVLGTSLLC 189
           +A+  GPT+GGL+NAT GNA ELII+L AL E K+ V++ SLLGS+LSNLLLVLG SL  
Sbjct: 61  LAHRLGPTLGGLLNATFGNAVELIISLMALGEGKVEVVRASLLGSILSNLLLVLGLSLFL 120

Query: 190 GGLANIREEQRYDRKQADVNSLLLLLGLLCQMLPLLFRYAAEPGTFPADSILQLSRASSI 249
           GG+ NIRE QR++R  A VNS LLLL +L  +LPL             DSIL LSR  +I
Sbjct: 121 GGIKNIRE-QRFNRGAAQVNSALLLLAILSLVLPLALPAGK----PGQDSILGLSRGIAI 175

Query: 250 LMLLAYVAYIFFQLKTHRKLFESQEEDEDED-----EEKAVIGFWSAFSWLVGMTAIIAV 304
           +ML+ Y A++ FQL THR+LFE QEE + +      EE  VI  WSA +WLVG T ++A+
Sbjct: 176 VMLILYGAFLVFQLVTHRQLFEPQEEADSDYDDEVHEEPTVISPWSAAAWLVGATIVVAL 235

Query: 305 LSEYVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAFKNKLDISLGVALGSA 364
           L+EY+V TIE+A +SWG+SV+FI +IL PIVGNAAEHAG++I AFKNKLDI+LGVALGSA
Sbjct: 236 LAEYLVDTIESAVESWGLSVAFIGVILAPIVGNAAEHAGAVIAAFKNKLDIALGVALGSA 295

Query: 365 TQISMFVVPLCVVIAWIIGVYMDLDFSLLETGSLAFTIIIVAFTLQDGTSHYMKGVVLFL 424
            QI++FVVP+ V++AW++G+ MDL+F   ET +LA ++ +   TLQDG S+Y++G VL  
Sbjct: 296 LQIALFVVPVVVLVAWMLGIPMDLNFGAPETVALALSVFLTTITLQDGRSNYLEGAVLLA 355

Query: 425 CYIAIAACFF 434
            YI IA  FF
Sbjct: 356 LYIIIAMLFF 365


The Ca2+:Cation Antiporter (CaCA) Family (TC 2.A.19)Proteins of the CaCA family are found ubiquitously, having been identified in animals, plants, yeast, archaea and widely divergent bacteria.All of the characterized animal proteins catalyze Ca2+:Na+ exchange although some also transport K+. The NCX1 plasma membrane protein exchanges 3 Na+ for 1 Ca2+. The E. coli ChaA protein catalyzes Ca2+:H+ antiport but may also catalyze Na+:H+ antiport. All remaining well-characterized members of the family catalyze Ca2+:H+ exchange.This model is generated from the calcium ion/proton exchangers of the CacA family [Transport and binding proteins, Cations and iron carrying compounds]. Length = 365

>gnl|CDD|129474 TIGR00378, cax, calcium/proton exchanger (cax) Back     alignment and domain information
>gnl|CDD|223464 COG0387, ChaA, Ca2+/H+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|216653 pfam01699, Na_Ca_ex, Sodium/calcium exchanger protein Back     alignment and domain information
>gnl|CDD|223604 COG0530, ECM27, Ca2+/Na+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|216653 pfam01699, Na_Ca_ex, Sodium/calcium exchanger protein Back     alignment and domain information
>gnl|CDD|232943 TIGR00367, TIGR00367, K+-dependent Na+/Ca+ exchanger related-protein Back     alignment and domain information
>gnl|CDD|223604 COG0530, ECM27, Ca2+/Na+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|182684 PRK10734, PRK10734, putative calcium/sodium:proton antiporter; Provisional Back     alignment and domain information
>gnl|CDD|182580 PRK10599, PRK10599, calcium/sodium:proton antiporter; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 456
KOG1397441 consensus Ca2+/H+ antiporter VCX1 and related prot 100.0
TIGR00378349 cax calcium/proton exchanger (cax). 100.0
TIGR00846365 caca2 calcium/proton exchanger. This model is gene 100.0
COG0387368 ChaA Ca2+/H+ antiporter [Inorganic ion transport a 100.0
PRK10599366 calcium/sodium:proton antiporter; Provisional 100.0
PRK10734325 putative calcium/sodium:proton antiporter; Provisi 100.0
TIGR00367307 K+-dependent Na+/Ca+ exchanger related-protein. Th 100.0
COG0530320 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport 100.0
KOG1307588 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 an 99.97
TIGR009271096 2A1904 K+-dependent Na+/Ca+ exchanger. 99.97
PLN03151650 cation/calcium exchanger; Provisional 99.93
PRK10734 325 putative calcium/sodium:proton antiporter; Provisi 99.8
TIGR00367 307 K+-dependent Na+/Ca+ exchanger related-protein. Th 99.77
PF01699140 Na_Ca_ex: Sodium/calcium exchanger protein; InterP 99.74
TIGR00927 1096 2A1904 K+-dependent Na+/Ca+ exchanger. 99.73
COG0530 320 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport 99.72
KOG2399605 consensus K+-dependent Na+:Ca2+ antiporter [Inorga 99.71
TIGR00845928 caca sodium/calcium exchanger 1. This model is spe 99.59
PLN03151 650 cation/calcium exchanger; Provisional 99.52
KOG1307 588 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 an 99.49
TIGR00378 349 cax calcium/proton exchanger (cax). 99.48
PF01699140 Na_Ca_ex: Sodium/calcium exchanger protein; InterP 99.47
TIGR00846 365 caca2 calcium/proton exchanger. This model is gene 99.46
TIGR00845928 caca sodium/calcium exchanger 1. This model is spe 99.15
PRK10599366 calcium/sodium:proton antiporter; Provisional 98.45
KOG2399 605 consensus K+-dependent Na+:Ca2+ antiporter [Inorga 98.24
KOG1306596 consensus Ca2+/Na+ exchanger NCX1 and related prot 98.19
KOG1306596 consensus Ca2+/Na+ exchanger NCX1 and related prot 97.78
COG0387368 ChaA Ca2+/H+ antiporter [Inorganic ion transport a 97.76
KOG1397441 consensus Ca2+/H+ antiporter VCX1 and related prot 96.52
>KOG1397 consensus Ca2+/H+ antiporter VCX1 and related proteins [Inorganic ion transport and metabolism] Back     alignment and domain information
Probab=100.00  E-value=1.5e-89  Score=675.47  Aligned_cols=420  Identities=52%  Similarity=0.887  Sum_probs=386.6

Q ss_pred             ccccc--cccCC-C--CCCCcHHHhhhcCCCCCCchhhhccCCCCCcccccCCCCCCCcccchhhHHHHHHHHHHHHhhh
Q 012820            9 QEVWE--LENGG-H--IDSSSKEIIRNNNNNDNSNEAAKTTQIVSTPIMRKKSDPLLPSNVRFRILREFLANLQEVILGT   83 (456)
Q Consensus         9 ~~~~~--~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (456)
                      .|||.  .|||+ .  .|+...+. |          .+++.+++.++..|||++..+.++.+++.+|....++|+++.++
T Consensus         5 ~~~~~~i~e~~~~~~~~~~~~~~l-~----------~~~s~~~~~~s~~~~k~~l~~~~~~~w~~~k~~~~~l~~Vll~~   73 (441)
T KOG1397|consen    5 PEPWSLIAEHGRANPLAKGFKREL-R----------AGRSAHNMASSLLEKKSLLSLIKHAPWKYLKNVLTNLQEVLLST   73 (441)
T ss_pred             cccHHHHHHhcCCCccccccchhh-h----------ccccccchhHHHHhhccchhhhhhhhhHHHHHHHHHHHHHHHhh
Confidence            46775  59998 2  44444444 2          56888888888899999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhccchhHHHHHHHHhhcCC
Q 012820           84 RLALLFPAVPLAVIARLNNFGRPWVFALSLLGLAPLAERVSFLTEQIAYFTGPTVGGLMNATCGNATELIIALFALYENK  163 (456)
Q Consensus        84 ~l~~ll~~vp~~i~~~~~~~~~~~vF~~~~laiipla~~l~~a~e~la~~~G~~vGGll~a~~gn~pElivsi~Al~~g~  163 (456)
                      ++|.+++|+|+++..|++.|+..|+|.+|+++|+|+|++++++|||+|.++|+++||++||+|||+.|+|++++|+++|+
T Consensus        74 ~l~~lf~f~pl~~~~h~~~~s~~~vF~lsll~iiPLA~~l~~ateqls~~tg~tvGgllNAtfGnaiElii~ilALk~g~  153 (441)
T KOG1397|consen   74 KLNLLFPFVPLAIIAHWFTWSKGWVFLLSLLGIIPLAERLGFATEQLSAYTGPTVGGLLNATFGNAIELIIYILALKNGK  153 (441)
T ss_pred             HHHHHHHHHHHHHHHhhhcccchHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcHHHHHhhhhccHHHHHHHHHHhhcCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cceehhhhhhHHHHHHHHHHHHHHHhccccccccccccchhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCC---CCCccc
Q 012820          164 IHVLKYSLLGSVLSNLLLVLGTSLLCGGLANIREEQRYDRKQADVNSLLLLLGLLCQMLPLLFRYAAEPGT---FPADSI  240 (456)
Q Consensus       164 ~~ia~gsilGSil~nllLvlG~~~l~gg~~~~~~~q~~~~~~a~~~~~ll~lav~~lllP~~~~~~~~~~~---~~~~~~  240 (456)
                      .++|+++++||+++|+|+++|+|+++||++  ||+|+||++.+++++.|++++++++++|++++++..+..   ...+..
T Consensus       154 ~riVq~SlLGSILsnlLLvlG~s~~~Ggi~--rk~Q~Fn~~~A~v~s~lLl~a~l~~l~P~~l~~~~~~~~~~~~~~~~~  231 (441)
T KOG1397|consen  154 VRIVQGSLLGSILSNLLLVLGLSLFCGGIR--RKDQRFNIKSAGVNSALLLLAVLGILLPTVLHYTYGGEVHDCSSGGAI  231 (441)
T ss_pred             eEEEehhhHHHHHHHHHHHhhHHHhhcccc--cceeecccchhhHHHHHHHHHHHHHHHHHHHHHhcCccccccCCccce
Confidence            999999999999999999999999999998  899999999999999999999999999999999854222   123346


Q ss_pred             ccchhHHHHHHHHHHHHHHHHhhhhcc--ccccCCCCCcch-------hhhhhhhchHHHHHHHHHHHHHHHHHHHHHHH
Q 012820          241 LQLSRASSILMLLAYVAYIFFQLKTHR--KLFESQEEDEDE-------DEEKAVIGFWSAFSWLVGMTAIIAVLSEYVVG  311 (456)
Q Consensus       241 ~~lsr~~siiLl~~Y~~yl~f~l~th~--~~f~~~~~~~~~-------~~e~~~~s~~~~i~~Lvi~~~~i~~~a~~lV~  311 (456)
                      +.+||..+++|++.|++|++||+||||  ..++.++|||++       +||.|.+++|++++||++.|++++++||++|+
T Consensus       232 l~lSr~~SivmliaYi~~L~FqL~t~~h~~~~~~~~ee~~~~d~~~s~~~e~p~is~~ss~~~L~~~T~~vsllaeyLV~  311 (441)
T KOG1397|consen  232 LPLSRGCSIVMLIAYIAYLWFQLKTARHIWQFPTPDEEETEQDDEVSNEDEAPNISRWSSIIWLLIMTLLVSLLAEYLVD  311 (441)
T ss_pred             eeehhccHHHHHHHHHHHHHHhhhcccccCCCCCCChhcccccccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            899999999999999999999999966  444433322211       34567899999999999999999999999999


Q ss_pred             hHHHhHhhhCCCccceeeehhhhccchhHHHHHHHHHHhCCCccHHHHHhhHHHHHHHhHHHHHHHHHHHhcccccccch
Q 012820          312 TIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAFKNKLDISLGVALGSATQISMFVVPLCVVIAWIIGVYMDLDFS  391 (456)
Q Consensus       312 si~~ia~~~gis~~~iGlillpi~tslpE~~~ai~aa~kg~~dlaig~~iGS~i~~~l~vip~~vli~~~~g~~~~l~f~  391 (456)
                      ++|+..+++|+|++|+|+|++|+++|++||++||.+|.|||+|+++|+++||++|+++|++|+.++++|.+|++|+++|+
T Consensus       312 ~Id~~~ds~~ls~~FiglillpiVgNaaEh~~AI~fA~k~kldLslgVaigsalQI~Lf~vP~~v~v~W~~g~~M~LnF~  391 (441)
T KOG1397|consen  312 TIDDVSDSWGLSVKFIGLILLPIVGNAAEHAGAISFAMKDKLDLSLGVAIGSALQIALFVVPFSVIVGWIMGISMDLNFP  391 (441)
T ss_pred             HHHHHHHhcCCChhhheeeeecccCchHHhhcceeeeecCcccchhhhhhhhhHhHHHhhhhHHHHhhhhcCCceEEecc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHccCCCc
Q 012820          392 LLETGSLAFTIIIVAFTLQDGTSHYMKGVVLFLCYIAIAACFFVHKIPQS  441 (456)
Q Consensus       392 ~~~~~~l~lsvl~~~~~~~~g~~~~~~G~~Ll~~Y~i~~~~~~~~~~~~~  441 (456)
                      .+|+.++++++++++|+++||++||+||.+|+++|++.+++||++++|++
T Consensus       392 ~~et~~l~isVfl~~y~lqdG~Sny~kG~mLll~Y~Iia~~Ff~~~~~~~  441 (441)
T KOG1397|consen  392 LLETACLFISVFLVAYLLQDGKSNYFKGLMLLLCYLIIAAGFFVYNDPSQ  441 (441)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHhhccCCCCC
Confidence            99999999999999999999999999999999999999999999999864



>TIGR00378 cax calcium/proton exchanger (cax) Back     alignment and domain information
>TIGR00846 caca2 calcium/proton exchanger Back     alignment and domain information
>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK10599 calcium/sodium:proton antiporter; Provisional Back     alignment and domain information
>PRK10734 putative calcium/sodium:proton antiporter; Provisional Back     alignment and domain information
>TIGR00367 K+-dependent Na+/Ca+ exchanger related-protein Back     alignment and domain information
>COG0530 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger Back     alignment and domain information
>PLN03151 cation/calcium exchanger; Provisional Back     alignment and domain information
>PRK10734 putative calcium/sodium:proton antiporter; Provisional Back     alignment and domain information
>TIGR00367 K+-dependent Na+/Ca+ exchanger related-protein Back     alignment and domain information
>PF01699 Na_Ca_ex: Sodium/calcium exchanger protein; InterPro: IPR004837 The sodium/calcium exchangers are a family of integral membrane proteins Back     alignment and domain information
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger Back     alignment and domain information
>COG0530 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG2399 consensus K+-dependent Na+:Ca2+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00845 caca sodium/calcium exchanger 1 Back     alignment and domain information
>PLN03151 cation/calcium exchanger; Provisional Back     alignment and domain information
>KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>TIGR00378 cax calcium/proton exchanger (cax) Back     alignment and domain information
>PF01699 Na_Ca_ex: Sodium/calcium exchanger protein; InterPro: IPR004837 The sodium/calcium exchangers are a family of integral membrane proteins Back     alignment and domain information
>TIGR00846 caca2 calcium/proton exchanger Back     alignment and domain information
>TIGR00845 caca sodium/calcium exchanger 1 Back     alignment and domain information
>PRK10599 calcium/sodium:proton antiporter; Provisional Back     alignment and domain information
>KOG2399 consensus K+-dependent Na+:Ca2+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG1306 consensus Ca2+/Na+ exchanger NCX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>KOG1306 consensus Ca2+/Na+ exchanger NCX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG1397 consensus Ca2+/H+ antiporter VCX1 and related proteins [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query456
3v5u_A320 Uncharacterized membrane protein MJ0091; lipid cub 5e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-04
>3v5u_A Uncharacterized membrane protein MJ0091; lipid cubic phase, cation protein complex, sodium,calcium EX membrane protein; HET: OLC MYS 1PE; 1.90A {Methanocaldococcus jannaschii} PDB: 3v5s_A* Length = 320 Back     alignment and structure
 Score = 65.7 bits (161), Expect = 5e-12
 Identities = 40/263 (15%), Positives = 88/263 (33%), Gaps = 49/263 (18%)

Query: 172 LGSVLSNLLLVLGTSLLCGGLANIREEQRYDRKQADVNSLLLLLGLLCQMLPLLFRYAAE 231
           +GS + N+ LVLG S +   +   +  Q+          + LL  +   ++         
Sbjct: 75  IGSCICNIGLVLGLSAIISPIIVDKNLQKNI-------LVYLLFVIFAAVI--------- 118

Query: 232 PGTFPADSILQLSRASSILMLLAYVAYIFFQLKTHRKLFESQEEDEDEDEEKAVIGFWSA 291
                   I   S    +++L+ ++ Y+ + +K           + +E+ +K       +
Sbjct: 119 -------GIDGFSWIDGVVLLILFIIYLRWTVKNGSA-------EIEENNDKNNPSVVFS 164

Query: 292 FSWLVGMTAIIAVLSEYVVGTIEAASDSWGISVSFISIIL------LPIVGNAAEHAGSI 345
              L+     + V +E  V   +  + +  IS   I   L      LP      E   S+
Sbjct: 165 LVLLIIGLIGVLVGAELFVDGAKKIALALDISDKVIGFTLVAFGTSLP------ELMVSL 218

Query: 346 IFAFKNKLDISLGVALGSATQISMFVVPLCVVIAWIIGVYMDLDFSLLETGSLAFTIIIV 405
             A +N   + LG  +GS        + +  +   +    + +         L    +++
Sbjct: 219 AAAKRNLGGMVLGNVIGSNIADIGGALAVGSLFMHLPAENVQMAV-------LVIMSLLL 271

Query: 406 AFTLQDGTSHYMKGVVLFLCYIA 428
               +       +G++    YI 
Sbjct: 272 YLFAKYSKIGRWQGILFLALYII 294


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query456
3v5u_A320 Uncharacterized membrane protein MJ0091; lipid cub 100.0
3v5u_A 320 Uncharacterized membrane protein MJ0091; lipid cub 99.81
>3v5u_A Uncharacterized membrane protein MJ0091; lipid cubic phase, cation protein complex, sodium,calcium EX membrane protein; HET: OLC MYS 1PE; 1.90A {Methanocaldococcus jannaschii} PDB: 3v5s_A* Back     alignment and structure
Probab=100.00  E-value=7e-47  Score=378.88  Aligned_cols=293  Identities=18%  Similarity=0.180  Sum_probs=242.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhC--Ccccchhhhhcc-chhHHHHHHHHhhcCCcceehhhhhhHHHHHHHHHH
Q 012820          107 WVFALSLLGLAPLAERVSFLTEQIAYFTG--PTVGGLMNATCG-NATELIIALFALYENKIHVLKYSLLGSVLSNLLLVL  183 (456)
Q Consensus       107 ~vF~~~~laiipla~~l~~a~e~la~~~G--~~vGGll~a~~g-n~pElivsi~Al~~g~~~ia~gsilGSil~nllLvl  183 (456)
                      ..|+++++.+++.++++++++|++|+++|  +.+.|++++++| |+||+++++.|..+|++|+++||++|||++|+++++
T Consensus         7 ~~l~~g~~~l~~~a~~lv~~~~~la~~lgis~~viGltiva~GTSlPEl~vsi~A~~~g~~diaiGnivGSni~nillvl   86 (320)
T 3v5u_A            7 GYFLLGLILLYYGSDWFVLGSERIARHFNVSNFVIGATVMAIGTSLPEILTSAYASYMHAPGISIGNAIGSCICNIGLVL   86 (320)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHTBCHHHHHHTHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHcccHHHHHHHHHHhCCCCceeeeeecchHHHHHHHHH
Confidence            45788999999999999999999999999  899999999999 799999999999999999999999999999999999


Q ss_pred             HHHHHhccccccccccccchhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccchhHHHHHHHHHHHHHHHHhh
Q 012820          184 GTSLLCGGLANIREEQRYDRKQADVNSLLLLLGLLCQMLPLLFRYAAEPGTFPADSILQLSRASSILMLLAYVAYIFFQL  263 (456)
Q Consensus       184 G~~~l~gg~~~~~~~q~~~~~~a~~~~~ll~lav~~lllP~~~~~~~~~~~~~~~~~~~lsr~~siiLl~~Y~~yl~f~l  263 (456)
                      |++.++++++   .++.+.+ +    ..+++++.+.+ ++  +         ..|  + ++|++|++|+.+|+.|++|++
T Consensus        87 G~~~li~p~~---v~~~~~~-d----~~~~l~~~~~l-~~--~---------~~~--g-is~~~g~~Ll~~Y~~yl~~~~  143 (320)
T 3v5u_A           87 GLSAIISPII---VDKNLQK-N----ILVYLLFVIFA-AV--I---------GID--G-FSWIDGVVLLILFIIYLRWTV  143 (320)
T ss_dssp             HHHHHHSCBC---CCHHHHH-H----HHHHHHHHHHH-HH--H---------TTT--C-BCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHcccc---ccHHHHH-H----HHHHHHHHHHH-HH--H---------HHc--c-cHHHHHHHHHHHHHHHHHHHH
Confidence            9999999875   2333322 2    22233332221 11  1         123  3 899999999999999999999


Q ss_pred             hhccccccCCCCCcchhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHhHHHhHhhhCCCccceeeehhhhccchhHHHH
Q 012820          264 KTHRKLFESQEEDEDEDEEKAVIGFWSAFSWLVGMTAIIAVLSEYVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAG  343 (456)
Q Consensus       264 ~th~~~f~~~~~~~~~~~e~~~~s~~~~i~~Lvi~~~~i~~~a~~lV~si~~ia~~~gis~~~iGlillpi~tslpE~~~  343 (456)
                      ++|++.    ++ +  +|++++.+.++.+.+++++++++..+++++|++++.+++.+|+|+.++|+|++|++||+||+++
T Consensus       144 ~~~~~~----~~-~--~~~~~~~~~~~~~~~l~~~l~~l~~~a~~lv~~~~~ia~~~gis~~~iGltlva~gtslPE~~~  216 (320)
T 3v5u_A          144 KNGSAE----IE-E--NNDKNNPSVVFSLVLLIIGLIGVLVGAELFVDGAKKIALALDISDKVIGFTLVAFGTSLPELMV  216 (320)
T ss_dssp             HHTBC--------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHTHHHHHTHHHHHH
T ss_pred             Hhcccc----cc-c--ccccccccHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHhCCchHHHHHHHHHHHhccHHHHH
Confidence            998751    11 1  1223345678889999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhCCCccHHHHHhhHHHHHHHhHHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHhCCccchHHHHHHH
Q 012820          344 SIIFAFKNKLDISLGVALGSATQISMFVVPLCVVIAWIIGVYMDLDFSLLETGSLAFTIIIVAFTLQDGTSHYMKGVVLF  423 (456)
Q Consensus       344 ai~aa~kg~~dlaig~~iGS~i~~~l~vip~~vli~~~~g~~~~l~f~~~~~~~l~lsvl~~~~~~~~g~~~~~~G~~Ll  423 (456)
                      ++.++|||+.|+|+||++|||+||+++++|+..++.     |++++  .+|...++.+.+++.+.++|||.+|+||.+|+
T Consensus       217 sv~aa~~g~~~laig~iiGS~ifn~~~v~g~~~li~-----p~~~~--~~d~~~~l~~~~ll~~~~~~~~i~~~eG~~ll  289 (320)
T 3v5u_A          217 SLAAAKRNLGGMVLGNVIGSNIADIGGALAVGSLFM-----HLPAE--NVQMAVLVIMSLLLYLFAKYSKIGRWQGILFL  289 (320)
T ss_dssp             HHHHHHTTCHHHHHHHHHHHHHHHHHTHHHHHHHHS-----CBCCC--HHHHHHHHHHHHHHHHHHHHSCBSHHHHHHHH
T ss_pred             HHHHHHcCCCcHHHHHHHhHHHHHHHHHHHHHHhhc-----cccch--HHHHHHHHHHHHHHHHHHhCCcCcHHHHHHHH
Confidence            999999999999999999999999999999988875     45543  56665544444444447789999999999999


Q ss_pred             HHHHH-HHHHHHHc
Q 012820          424 LCYIA-IAACFFVH  436 (456)
Q Consensus       424 ~~Y~i-~~~~~~~~  436 (456)
                      ++|++ |+...+..
T Consensus       290 ~~Y~~~y~~~~~~~  303 (320)
T 3v5u_A          290 ALYIIAIASLRMGG  303 (320)
T ss_dssp             HHHHHHHHHSCSSC
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999 98776643



>3v5u_A Uncharacterized membrane protein MJ0091; lipid cubic phase, cation protein complex, sodium,calcium EX membrane protein; HET: OLC MYS 1PE; 1.90A {Methanocaldococcus jannaschii} PDB: 3v5s_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00