Citrus Sinensis ID: 012820
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 456 | ||||||
| 224054546 | 402 | Ca2+ antiporter/cation exchanger [Populu | 0.877 | 0.995 | 0.827 | 1e-177 | |
| 297745901 | 446 | unnamed protein product [Vitis vinifera] | 0.934 | 0.955 | 0.770 | 1e-177 | |
| 359478849 | 436 | PREDICTED: vacuolar cation/proton exchan | 0.942 | 0.986 | 0.764 | 1e-177 | |
| 224104278 | 401 | Ca2+ antiporter/cation exchanger [Populu | 0.875 | 0.995 | 0.825 | 1e-175 | |
| 255569343 | 439 | Vacuolar cation/proton exchanger 1a, put | 0.949 | 0.986 | 0.794 | 1e-174 | |
| 255574373 | 449 | Vacuolar cation/proton exchanger 1a, put | 0.967 | 0.982 | 0.687 | 1e-170 | |
| 356506617 | 451 | PREDICTED: vacuolar cation/proton exchan | 0.934 | 0.944 | 0.663 | 1e-168 | |
| 357490695 | 435 | Vacuolar cation/proton exchanger [Medica | 0.918 | 0.963 | 0.748 | 1e-166 | |
| 356496231 | 456 | PREDICTED: vacuolar cation/proton exchan | 0.888 | 0.888 | 0.691 | 1e-164 | |
| 356551863 | 440 | PREDICTED: vacuolar cation/proton exchan | 0.875 | 0.906 | 0.771 | 1e-164 |
| >gi|224054546|ref|XP_002298314.1| Ca2+ antiporter/cation exchanger [Populus trichocarpa] gi|222845572|gb|EEE83119.1| Ca2+ antiporter/cation exchanger [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 628 bits (1620), Expect = e-177, Method: Compositional matrix adjust.
Identities = 332/401 (82%), Positives = 368/401 (91%), Gaps = 1/401 (0%)
Query: 41 AKTTQIVSTPIMRKKSDPLL-PSNVRFRILREFLANLQEVILGTRLALLFPAVPLAVIAR 99
KT Q +S+ I+R KSDP+L S+ RF++L FL NLQEVILGT+LA+LFPA+PLA+ A
Sbjct: 2 GKTPQNISSSILRNKSDPMLVSSSARFQMLWHFLTNLQEVILGTKLAVLFPAIPLAIAAD 61
Query: 100 LNNFGRPWVFALSLLGLAPLAERVSFLTEQIAYFTGPTVGGLMNATCGNATELIIALFAL 159
FGRPW+FALSLLGL PLAERVSFLTEQIAYFTGPTVGGL+NATCGNATELIIALFAL
Sbjct: 62 YYKFGRPWIFALSLLGLTPLAERVSFLTEQIAYFTGPTVGGLLNATCGNATELIIALFAL 121
Query: 160 YENKIHVLKYSLLGSVLSNLLLVLGTSLLCGGLANIREEQRYDRKQADVNSLLLLLGLLC 219
Y+NKIHVLKYSLLGS+LSNLLLVLGTSLLCGGLAN++ EQRYDRKQADVNSLLLLLGLLC
Sbjct: 122 YQNKIHVLKYSLLGSILSNLLLVLGTSLLCGGLANLKREQRYDRKQADVNSLLLLLGLLC 181
Query: 220 QMLPLLFRYAAEPGTFPADSILQLSRASSILMLLAYVAYIFFQLKTHRKLFESQEEDEDE 279
MLPL+FRYA GT A SILQLSR SSI+ML+AYVAYIFFQLKTHR+LF++QEE++D+
Sbjct: 182 HMLPLMFRYAIGEGTATACSILQLSRVSSIVMLIAYVAYIFFQLKTHRQLFDAQEEEDDD 241
Query: 280 DEEKAVIGFWSAFSWLVGMTAIIAVLSEYVVGTIEAASDSWGISVSFISIILLPIVGNAA 339
+EEKAVIGFWSAF+WL GMT IIA+LSEYVVGTIEAASDSWGISVSFISIILLPIVGNAA
Sbjct: 242 EEEKAVIGFWSAFTWLAGMTIIIALLSEYVVGTIEAASDSWGISVSFISIILLPIVGNAA 301
Query: 340 EHAGSIIFAFKNKLDISLGVALGSATQISMFVVPLCVVIAWIIGVYMDLDFSLLETGSLA 399
EHAGSIIFAFKNKLDISLGVALGSA+QISMFVVPLCV++AW + + MDLDFSLLETGSLA
Sbjct: 302 EHAGSIIFAFKNKLDISLGVALGSASQISMFVVPLCVIVAWTMHIRMDLDFSLLETGSLA 361
Query: 400 FTIIIVAFTLQDGTSHYMKGVVLFLCYIAIAACFFVHKIPQ 440
FTIII AFTLQDGTSHYMKG++LFLCYI IAACFFVHKIPQ
Sbjct: 362 FTIIITAFTLQDGTSHYMKGMLLFLCYIVIAACFFVHKIPQ 402
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297745901|emb|CBI15957.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|359478849|ref|XP_002279135.2| PREDICTED: vacuolar cation/proton exchanger 3-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|224104278|ref|XP_002313381.1| Ca2+ antiporter/cation exchanger [Populus trichocarpa] gi|222849789|gb|EEE87336.1| Ca2+ antiporter/cation exchanger [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|255569343|ref|XP_002525639.1| Vacuolar cation/proton exchanger 1a, putative [Ricinus communis] gi|223535075|gb|EEF36757.1| Vacuolar cation/proton exchanger 1a, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|255574373|ref|XP_002528100.1| Vacuolar cation/proton exchanger 1a, putative [Ricinus communis] gi|223532489|gb|EEF34279.1| Vacuolar cation/proton exchanger 1a, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|356506617|ref|XP_003522074.1| PREDICTED: vacuolar cation/proton exchanger 3-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|357490695|ref|XP_003615635.1| Vacuolar cation/proton exchanger [Medicago truncatula] gi|355516970|gb|AES98593.1| Vacuolar cation/proton exchanger [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|356496231|ref|XP_003516972.1| PREDICTED: vacuolar cation/proton exchanger 3-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356551863|ref|XP_003544292.1| PREDICTED: vacuolar cation/proton exchanger 1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 456 | ||||||
| TAIR|locus:2074348 | 459 | CAX3 "cation exchanger 3" [Ara | 0.894 | 0.888 | 0.581 | 3.8e-117 | |
| TAIR|locus:2020462 | 441 | CAX5 "cation exchanger 5" [Ara | 0.728 | 0.752 | 0.474 | 8.4e-74 | |
| TAIR|locus:2088130 | 441 | CAX2 "cation exchanger 2" [Ara | 0.728 | 0.752 | 0.469 | 4.6e-73 | |
| ASPGD|ASPL0000052404 | 434 | vcxA [Emericella nidulans (tax | 0.712 | 0.748 | 0.330 | 5.2e-49 | |
| UNIPROTKB|G4NIP8 | 611 | MGG_04159 "Calcium-proton exch | 0.335 | 0.250 | 0.398 | 3.1e-48 | |
| SGD|S000002286 | 411 | VCX1 "Vacuolar membrane antipo | 0.736 | 0.817 | 0.328 | 9.8e-48 | |
| CGD|CAL0005539 | 416 | VCX1 [Candida albicans (taxid: | 0.302 | 0.331 | 0.413 | 1.6e-47 | |
| POMBASE|SPCC1795.02c | 412 | vcx1 "CaCA proton/calcium exch | 0.717 | 0.793 | 0.299 | 1.4e-46 | |
| ASPGD|ASPL0000065939 | 742 | AN7173 [Emericella nidulans (t | 0.337 | 0.207 | 0.445 | 7.8e-46 | |
| UNIPROTKB|G4NFU3 | 782 | MGG_08710 "Vacuolar calcium io | 0.307 | 0.179 | 0.450 | 8.4e-46 |
| TAIR|locus:2074348 CAX3 "cation exchanger 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1154 (411.3 bits), Expect = 3.8e-117, P = 3.8e-117
Identities = 243/418 (58%), Positives = 292/418 (69%)
Query: 42 KTTQIVSTPIMRKKSDPLLPSNVRFRILREFLANLQEVILGTRXXXXXXXXXXXXXXRLN 101
+T +S+ +RKKSD L V + L+ L+NLQEVILGT+
Sbjct: 32 RTAHNMSSSSLRKKSDLRLVQKVPCKTLKNILSNLQEVILGTKLTLLFLAIPLAILANSY 91
Query: 102 NFGRPWVFALSLLGLAPLAERVSFLTEQIAYFTGPTVGGLMNATCGNATELIIALFALYE 161
N+GRP +F LSL+GL PLAERVSFLTEQ+A++TGPTVGGL+NATCGNATELIIA+ AL
Sbjct: 92 NYGRPLIFGLSLIGLTPLAERVSFLTEQLAFYTGPTVGGLLNATCGNATELIIAILALAN 151
Query: 162 NKIHVLKYXXXXXXXXXXXXXXXXXXXXXXXANIREEQRYDRKQADVNSXXXXXXXXXXX 221
NK+ V+KY ANIR EQR+DRKQADVN
Sbjct: 152 NKVAVVKYSLLGSILSNLLLVLGTSLFFGGIANIRREQRFDRKQADVNFFLLLMGLLCHL 211
Query: 222 XXXXFRYAA--EPGTFPADSI-LQLSRASSILMLLAYVAYIFFQLKTHRKLFESQXXXXX 278
+YAA E T + + L LSR SSI+ML+AY+AY+ FQL THR+LFE+Q
Sbjct: 212 LPLLLKYAATGEVSTSMINKMSLTLSRTSSIVMLIAYIAYLIFQLWTHRQLFEAQQDDDD 271
Query: 279 XXXXKA------VIGFWSAFSWLVGMTAIIAVLSEYVVGTIEAASDSWGISVSFISIILL 332
+ VIGFWS F+WLVGMT +IA+LSEYVV TIE ASDSWG+SVSFISIILL
Sbjct: 272 AYDDEVSVEETPVIGFWSGFAWLVGMTIVIALLSEYVVDTIEDASDSWGLSVSFISIILL 331
Query: 333 PIVGNAAEHAGSIIFAFKNKLDISLGVALGSATQISMFVVPLCVVIAWIIGVYMDLDFSL 392
PIVGNAAEHAG+IIFAFKNKLDISLGVALGSATQIS+FVVPL V++AWI+G+ MDL+F++
Sbjct: 332 PIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQISLFVVPLSVIVAWILGIKMDLNFNI 391
Query: 393 LETGSLAFTIIIVAFTLQDGTSHYMKGVVLFLCYIAIAACFFVHKIPQ-STANMGTKP 449
LET SLA III AFTLQDGTSHYMKG+VL LCY+ IAACFFV +IPQ + ++G +P
Sbjct: 392 LETSSLALAIIITAFTLQDGTSHYMKGLVLLLCYVIIAACFFVDQIPQPNDLDVGLQP 449
|
|
| TAIR|locus:2020462 CAX5 "cation exchanger 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2088130 CAX2 "cation exchanger 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| ASPGD|ASPL0000052404 vcxA [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|G4NIP8 MGG_04159 "Calcium-proton exchanger" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
| SGD|S000002286 VCX1 "Vacuolar membrane antiporter with Ca2+/H+ and K+/H+ exchange activity" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
|---|
| CGD|CAL0005539 VCX1 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
| POMBASE|SPCC1795.02c vcx1 "CaCA proton/calcium exchanger (predicted)" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
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| ASPGD|ASPL0000065939 AN7173 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|G4NFU3 MGG_08710 "Vacuolar calcium ion transporter" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| gw1.I.911.1 | Ca2+ antiporter/cation exchanger (402 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 456 | |||
| TIGR00846 | 365 | TIGR00846, caca2, calcium/proton exchanger | 1e-143 | |
| TIGR00378 | 349 | TIGR00378, cax, calcium/proton exchanger (cax) | 8e-87 | |
| COG0387 | 368 | COG0387, ChaA, Ca2+/H+ antiporter [Inorganic ion t | 5e-76 | |
| pfam01699 | 135 | pfam01699, Na_Ca_ex, Sodium/calcium exchanger prot | 8e-23 | |
| COG0530 | 320 | COG0530, ECM27, Ca2+/Na+ antiporter [Inorganic ion | 4e-19 | |
| pfam01699 | 135 | pfam01699, Na_Ca_ex, Sodium/calcium exchanger prot | 1e-11 | |
| TIGR00367 | 307 | TIGR00367, TIGR00367, K+-dependent Na+/Ca+ exchang | 9e-09 | |
| COG0530 | 320 | COG0530, ECM27, Ca2+/Na+ antiporter [Inorganic ion | 1e-06 | |
| PRK10734 | 325 | PRK10734, PRK10734, putative calcium/sodium:proton | 3e-05 | |
| PRK10599 | 366 | PRK10599, PRK10599, calcium/sodium:proton antiport | 0.002 |
| >gnl|CDD|129926 TIGR00846, caca2, calcium/proton exchanger | Back alignment and domain information |
|---|
Score = 413 bits (1064), Expect = e-143
Identities = 207/370 (55%), Positives = 269/370 (72%), Gaps = 10/370 (2%)
Query: 70 REFLANLQEVILGTRLALLFPAVPLAVIARLNNFGRPWVFALSLLGLAPLAERVSFLTEQ 129
+ L+ LQEVILG+ L +L VP A+I L + + +F L+LLG+ PLAERVSF TEQ
Sbjct: 1 KYRLSVLQEVILGSWLNILLIFVPAAIILGLWGWSQTVIFLLNLLGIIPLAERVSFATEQ 60
Query: 130 IAYFTGPTVGGLMNATCGNATELIIALFALYENKIHVLKYSLLGSVLSNLLLVLGTSLLC 189
+A+ GPT+GGL+NAT GNA ELII+L AL E K+ V++ SLLGS+LSNLLLVLG SL
Sbjct: 61 LAHRLGPTLGGLLNATFGNAVELIISLMALGEGKVEVVRASLLGSILSNLLLVLGLSLFL 120
Query: 190 GGLANIREEQRYDRKQADVNSLLLLLGLLCQMLPLLFRYAAEPGTFPADSILQLSRASSI 249
GG+ NIRE QR++R A VNS LLLL +L +LPL DSIL LSR +I
Sbjct: 121 GGIKNIRE-QRFNRGAAQVNSALLLLAILSLVLPLALPAGK----PGQDSILGLSRGIAI 175
Query: 250 LMLLAYVAYIFFQLKTHRKLFESQEEDEDED-----EEKAVIGFWSAFSWLVGMTAIIAV 304
+ML+ Y A++ FQL THR+LFE QEE + + EE VI WSA +WLVG T ++A+
Sbjct: 176 VMLILYGAFLVFQLVTHRQLFEPQEEADSDYDDEVHEEPTVISPWSAAAWLVGATIVVAL 235
Query: 305 LSEYVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAFKNKLDISLGVALGSA 364
L+EY+V TIE+A +SWG+SV+FI +IL PIVGNAAEHAG++I AFKNKLDI+LGVALGSA
Sbjct: 236 LAEYLVDTIESAVESWGLSVAFIGVILAPIVGNAAEHAGAVIAAFKNKLDIALGVALGSA 295
Query: 365 TQISMFVVPLCVVIAWIIGVYMDLDFSLLETGSLAFTIIIVAFTLQDGTSHYMKGVVLFL 424
QI++FVVP+ V++AW++G+ MDL+F ET +LA ++ + TLQDG S+Y++G VL
Sbjct: 296 LQIALFVVPVVVLVAWMLGIPMDLNFGAPETVALALSVFLTTITLQDGRSNYLEGAVLLA 355
Query: 425 CYIAIAACFF 434
YI IA FF
Sbjct: 356 LYIIIAMLFF 365
|
The Ca2+:Cation Antiporter (CaCA) Family (TC 2.A.19)Proteins of the CaCA family are found ubiquitously, having been identified in animals, plants, yeast, archaea and widely divergent bacteria.All of the characterized animal proteins catalyze Ca2+:Na+ exchange although some also transport K+. The NCX1 plasma membrane protein exchanges 3 Na+ for 1 Ca2+. The E. coli ChaA protein catalyzes Ca2+:H+ antiport but may also catalyze Na+:H+ antiport. All remaining well-characterized members of the family catalyze Ca2+:H+ exchange.This model is generated from the calcium ion/proton exchangers of the CacA family [Transport and binding proteins, Cations and iron carrying compounds]. Length = 365 |
| >gnl|CDD|129474 TIGR00378, cax, calcium/proton exchanger (cax) | Back alignment and domain information |
|---|
| >gnl|CDD|223464 COG0387, ChaA, Ca2+/H+ antiporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|216653 pfam01699, Na_Ca_ex, Sodium/calcium exchanger protein | Back alignment and domain information |
|---|
| >gnl|CDD|223604 COG0530, ECM27, Ca2+/Na+ antiporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|216653 pfam01699, Na_Ca_ex, Sodium/calcium exchanger protein | Back alignment and domain information |
|---|
| >gnl|CDD|232943 TIGR00367, TIGR00367, K+-dependent Na+/Ca+ exchanger related-protein | Back alignment and domain information |
|---|
| >gnl|CDD|223604 COG0530, ECM27, Ca2+/Na+ antiporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|182684 PRK10734, PRK10734, putative calcium/sodium:proton antiporter; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|182580 PRK10599, PRK10599, calcium/sodium:proton antiporter; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 456 | |||
| KOG1397 | 441 | consensus Ca2+/H+ antiporter VCX1 and related prot | 100.0 | |
| TIGR00378 | 349 | cax calcium/proton exchanger (cax). | 100.0 | |
| TIGR00846 | 365 | caca2 calcium/proton exchanger. This model is gene | 100.0 | |
| COG0387 | 368 | ChaA Ca2+/H+ antiporter [Inorganic ion transport a | 100.0 | |
| PRK10599 | 366 | calcium/sodium:proton antiporter; Provisional | 100.0 | |
| PRK10734 | 325 | putative calcium/sodium:proton antiporter; Provisi | 100.0 | |
| TIGR00367 | 307 | K+-dependent Na+/Ca+ exchanger related-protein. Th | 100.0 | |
| COG0530 | 320 | ECM27 Ca2+/Na+ antiporter [Inorganic ion transport | 100.0 | |
| KOG1307 | 588 | consensus K+-dependent Ca2+/Na+ exchanger NCKX1 an | 99.97 | |
| TIGR00927 | 1096 | 2A1904 K+-dependent Na+/Ca+ exchanger. | 99.97 | |
| PLN03151 | 650 | cation/calcium exchanger; Provisional | 99.93 | |
| PRK10734 | 325 | putative calcium/sodium:proton antiporter; Provisi | 99.8 | |
| TIGR00367 | 307 | K+-dependent Na+/Ca+ exchanger related-protein. Th | 99.77 | |
| PF01699 | 140 | Na_Ca_ex: Sodium/calcium exchanger protein; InterP | 99.74 | |
| TIGR00927 | 1096 | 2A1904 K+-dependent Na+/Ca+ exchanger. | 99.73 | |
| COG0530 | 320 | ECM27 Ca2+/Na+ antiporter [Inorganic ion transport | 99.72 | |
| KOG2399 | 605 | consensus K+-dependent Na+:Ca2+ antiporter [Inorga | 99.71 | |
| TIGR00845 | 928 | caca sodium/calcium exchanger 1. This model is spe | 99.59 | |
| PLN03151 | 650 | cation/calcium exchanger; Provisional | 99.52 | |
| KOG1307 | 588 | consensus K+-dependent Ca2+/Na+ exchanger NCKX1 an | 99.49 | |
| TIGR00378 | 349 | cax calcium/proton exchanger (cax). | 99.48 | |
| PF01699 | 140 | Na_Ca_ex: Sodium/calcium exchanger protein; InterP | 99.47 | |
| TIGR00846 | 365 | caca2 calcium/proton exchanger. This model is gene | 99.46 | |
| TIGR00845 | 928 | caca sodium/calcium exchanger 1. This model is spe | 99.15 | |
| PRK10599 | 366 | calcium/sodium:proton antiporter; Provisional | 98.45 | |
| KOG2399 | 605 | consensus K+-dependent Na+:Ca2+ antiporter [Inorga | 98.24 | |
| KOG1306 | 596 | consensus Ca2+/Na+ exchanger NCX1 and related prot | 98.19 | |
| KOG1306 | 596 | consensus Ca2+/Na+ exchanger NCX1 and related prot | 97.78 | |
| COG0387 | 368 | ChaA Ca2+/H+ antiporter [Inorganic ion transport a | 97.76 | |
| KOG1397 | 441 | consensus Ca2+/H+ antiporter VCX1 and related prot | 96.52 |
| >KOG1397 consensus Ca2+/H+ antiporter VCX1 and related proteins [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-89 Score=675.47 Aligned_cols=420 Identities=52% Similarity=0.887 Sum_probs=386.6
Q ss_pred ccccc--cccCC-C--CCCCcHHHhhhcCCCCCCchhhhccCCCCCcccccCCCCCCCcccchhhHHHHHHHHHHHHhhh
Q 012820 9 QEVWE--LENGG-H--IDSSSKEIIRNNNNNDNSNEAAKTTQIVSTPIMRKKSDPLLPSNVRFRILREFLANLQEVILGT 83 (456)
Q Consensus 9 ~~~~~--~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (456)
.|||. .|||+ . .|+...+. | .+++.+++.++..|||++..+.++.+++.+|....++|+++.++
T Consensus 5 ~~~~~~i~e~~~~~~~~~~~~~~l-~----------~~~s~~~~~~s~~~~k~~l~~~~~~~w~~~k~~~~~l~~Vll~~ 73 (441)
T KOG1397|consen 5 PEPWSLIAEHGRANPLAKGFKREL-R----------AGRSAHNMASSLLEKKSLLSLIKHAPWKYLKNVLTNLQEVLLST 73 (441)
T ss_pred cccHHHHHHhcCCCccccccchhh-h----------ccccccchhHHHHhhccchhhhhhhhhHHHHHHHHHHHHHHHhh
Confidence 46775 59998 2 44444444 2 56888888888899999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhccchhHHHHHHHHhhcCC
Q 012820 84 RLALLFPAVPLAVIARLNNFGRPWVFALSLLGLAPLAERVSFLTEQIAYFTGPTVGGLMNATCGNATELIIALFALYENK 163 (456)
Q Consensus 84 ~l~~ll~~vp~~i~~~~~~~~~~~vF~~~~laiipla~~l~~a~e~la~~~G~~vGGll~a~~gn~pElivsi~Al~~g~ 163 (456)
++|.+++|+|+++..|++.|+..|+|.+|+++|+|+|++++++|||+|.++|+++||++||+|||+.|+|++++|+++|+
T Consensus 74 ~l~~lf~f~pl~~~~h~~~~s~~~vF~lsll~iiPLA~~l~~ateqls~~tg~tvGgllNAtfGnaiElii~ilALk~g~ 153 (441)
T KOG1397|consen 74 KLNLLFPFVPLAIIAHWFTWSKGWVFLLSLLGIIPLAERLGFATEQLSAYTGPTVGGLLNATFGNAIELIIYILALKNGK 153 (441)
T ss_pred HHHHHHHHHHHHHHHhhhcccchHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcHHHHHhhhhccHHHHHHHHHHhhcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceehhhhhhHHHHHHHHHHHHHHHhccccccccccccchhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCC---CCCccc
Q 012820 164 IHVLKYSLLGSVLSNLLLVLGTSLLCGGLANIREEQRYDRKQADVNSLLLLLGLLCQMLPLLFRYAAEPGT---FPADSI 240 (456)
Q Consensus 164 ~~ia~gsilGSil~nllLvlG~~~l~gg~~~~~~~q~~~~~~a~~~~~ll~lav~~lllP~~~~~~~~~~~---~~~~~~ 240 (456)
.++|+++++||+++|+|+++|+|+++||++ ||+|+||++.+++++.|++++++++++|++++++..+.. ...+..
T Consensus 154 ~riVq~SlLGSILsnlLLvlG~s~~~Ggi~--rk~Q~Fn~~~A~v~s~lLl~a~l~~l~P~~l~~~~~~~~~~~~~~~~~ 231 (441)
T KOG1397|consen 154 VRIVQGSLLGSILSNLLLVLGLSLFCGGIR--RKDQRFNIKSAGVNSALLLLAVLGILLPTVLHYTYGGEVHDCSSGGAI 231 (441)
T ss_pred eEEEehhhHHHHHHHHHHHhhHHHhhcccc--cceeecccchhhHHHHHHHHHHHHHHHHHHHHHhcCccccccCCccce
Confidence 999999999999999999999999999998 899999999999999999999999999999999854222 123346
Q ss_pred ccchhHHHHHHHHHHHHHHHHhhhhcc--ccccCCCCCcch-------hhhhhhhchHHHHHHHHHHHHHHHHHHHHHHH
Q 012820 241 LQLSRASSILMLLAYVAYIFFQLKTHR--KLFESQEEDEDE-------DEEKAVIGFWSAFSWLVGMTAIIAVLSEYVVG 311 (456)
Q Consensus 241 ~~lsr~~siiLl~~Y~~yl~f~l~th~--~~f~~~~~~~~~-------~~e~~~~s~~~~i~~Lvi~~~~i~~~a~~lV~ 311 (456)
+.+||..+++|++.|++|++||+|||| ..++.++|||++ +||.|.+++|++++||++.|++++++||++|+
T Consensus 232 l~lSr~~SivmliaYi~~L~FqL~t~~h~~~~~~~~ee~~~~d~~~s~~~e~p~is~~ss~~~L~~~T~~vsllaeyLV~ 311 (441)
T KOG1397|consen 232 LPLSRGCSIVMLIAYIAYLWFQLKTARHIWQFPTPDEEETEQDDEVSNEDEAPNISRWSSIIWLLIMTLLVSLLAEYLVD 311 (441)
T ss_pred eeehhccHHHHHHHHHHHHHHhhhcccccCCCCCCChhcccccccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999966 444433322211 34567899999999999999999999999999
Q ss_pred hHHHhHhhhCCCccceeeehhhhccchhHHHHHHHHHHhCCCccHHHHHhhHHHHHHHhHHHHHHHHHHHhcccccccch
Q 012820 312 TIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAFKNKLDISLGVALGSATQISMFVVPLCVVIAWIIGVYMDLDFS 391 (456)
Q Consensus 312 si~~ia~~~gis~~~iGlillpi~tslpE~~~ai~aa~kg~~dlaig~~iGS~i~~~l~vip~~vli~~~~g~~~~l~f~ 391 (456)
++|+..+++|+|++|+|+|++|+++|++||++||.+|.|||+|+++|+++||++|+++|++|+.++++|.+|++|+++|+
T Consensus 312 ~Id~~~ds~~ls~~FiglillpiVgNaaEh~~AI~fA~k~kldLslgVaigsalQI~Lf~vP~~v~v~W~~g~~M~LnF~ 391 (441)
T KOG1397|consen 312 TIDDVSDSWGLSVKFIGLILLPIVGNAAEHAGAISFAMKDKLDLSLGVAIGSALQIALFVVPFSVIVGWIMGISMDLNFP 391 (441)
T ss_pred HHHHHHHhcCCChhhheeeeecccCchHHhhcceeeeecCcccchhhhhhhhhHhHHHhhhhHHHHhhhhcCCceEEecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHccCCCc
Q 012820 392 LLETGSLAFTIIIVAFTLQDGTSHYMKGVVLFLCYIAIAACFFVHKIPQS 441 (456)
Q Consensus 392 ~~~~~~l~lsvl~~~~~~~~g~~~~~~G~~Ll~~Y~i~~~~~~~~~~~~~ 441 (456)
.+|+.++++++++++|+++||++||+||.+|+++|++.+++||++++|++
T Consensus 392 ~~et~~l~isVfl~~y~lqdG~Sny~kG~mLll~Y~Iia~~Ff~~~~~~~ 441 (441)
T KOG1397|consen 392 LLETACLFISVFLVAYLLQDGKSNYFKGLMLLLCYLIIAAGFFVYNDPSQ 441 (441)
T ss_pred HHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHhhccCCCCC
Confidence 99999999999999999999999999999999999999999999999864
|
|
| >TIGR00378 cax calcium/proton exchanger (cax) | Back alignment and domain information |
|---|
| >TIGR00846 caca2 calcium/proton exchanger | Back alignment and domain information |
|---|
| >COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PRK10599 calcium/sodium:proton antiporter; Provisional | Back alignment and domain information |
|---|
| >PRK10734 putative calcium/sodium:proton antiporter; Provisional | Back alignment and domain information |
|---|
| >TIGR00367 K+-dependent Na+/Ca+ exchanger related-protein | Back alignment and domain information |
|---|
| >COG0530 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger | Back alignment and domain information |
|---|
| >PLN03151 cation/calcium exchanger; Provisional | Back alignment and domain information |
|---|
| >PRK10734 putative calcium/sodium:proton antiporter; Provisional | Back alignment and domain information |
|---|
| >TIGR00367 K+-dependent Na+/Ca+ exchanger related-protein | Back alignment and domain information |
|---|
| >PF01699 Na_Ca_ex: Sodium/calcium exchanger protein; InterPro: IPR004837 The sodium/calcium exchangers are a family of integral membrane proteins | Back alignment and domain information |
|---|
| >TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger | Back alignment and domain information |
|---|
| >COG0530 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >KOG2399 consensus K+-dependent Na+:Ca2+ antiporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR00845 caca sodium/calcium exchanger 1 | Back alignment and domain information |
|---|
| >PLN03151 cation/calcium exchanger; Provisional | Back alignment and domain information |
|---|
| >KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >TIGR00378 cax calcium/proton exchanger (cax) | Back alignment and domain information |
|---|
| >PF01699 Na_Ca_ex: Sodium/calcium exchanger protein; InterPro: IPR004837 The sodium/calcium exchangers are a family of integral membrane proteins | Back alignment and domain information |
|---|
| >TIGR00846 caca2 calcium/proton exchanger | Back alignment and domain information |
|---|
| >TIGR00845 caca sodium/calcium exchanger 1 | Back alignment and domain information |
|---|
| >PRK10599 calcium/sodium:proton antiporter; Provisional | Back alignment and domain information |
|---|
| >KOG2399 consensus K+-dependent Na+:Ca2+ antiporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >KOG1306 consensus Ca2+/Na+ exchanger NCX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG1306 consensus Ca2+/Na+ exchanger NCX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >KOG1397 consensus Ca2+/H+ antiporter VCX1 and related proteins [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 456 | |||
| 3v5u_A | 320 | Uncharacterized membrane protein MJ0091; lipid cub | 5e-12 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-04 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-04 |
| >3v5u_A Uncharacterized membrane protein MJ0091; lipid cubic phase, cation protein complex, sodium,calcium EX membrane protein; HET: OLC MYS 1PE; 1.90A {Methanocaldococcus jannaschii} PDB: 3v5s_A* Length = 320 | Back alignment and structure |
|---|
Score = 65.7 bits (161), Expect = 5e-12
Identities = 40/263 (15%), Positives = 88/263 (33%), Gaps = 49/263 (18%)
Query: 172 LGSVLSNLLLVLGTSLLCGGLANIREEQRYDRKQADVNSLLLLLGLLCQMLPLLFRYAAE 231
+GS + N+ LVLG S + + + Q+ + LL + ++
Sbjct: 75 IGSCICNIGLVLGLSAIISPIIVDKNLQKNI-------LVYLLFVIFAAVI--------- 118
Query: 232 PGTFPADSILQLSRASSILMLLAYVAYIFFQLKTHRKLFESQEEDEDEDEEKAVIGFWSA 291
I S +++L+ ++ Y+ + +K + +E+ +K +
Sbjct: 119 -------GIDGFSWIDGVVLLILFIIYLRWTVKNGSA-------EIEENNDKNNPSVVFS 164
Query: 292 FSWLVGMTAIIAVLSEYVVGTIEAASDSWGISVSFISIIL------LPIVGNAAEHAGSI 345
L+ + V +E V + + + IS I L LP E S+
Sbjct: 165 LVLLIIGLIGVLVGAELFVDGAKKIALALDISDKVIGFTLVAFGTSLP------ELMVSL 218
Query: 346 IFAFKNKLDISLGVALGSATQISMFVVPLCVVIAWIIGVYMDLDFSLLETGSLAFTIIIV 405
A +N + LG +GS + + + + + + L +++
Sbjct: 219 AAAKRNLGGMVLGNVIGSNIADIGGALAVGSLFMHLPAENVQMAV-------LVIMSLLL 271
Query: 406 AFTLQDGTSHYMKGVVLFLCYIA 428
+ +G++ YI
Sbjct: 272 YLFAKYSKIGRWQGILFLALYII 294
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 456 | |||
| 3v5u_A | 320 | Uncharacterized membrane protein MJ0091; lipid cub | 100.0 | |
| 3v5u_A | 320 | Uncharacterized membrane protein MJ0091; lipid cub | 99.81 |
| >3v5u_A Uncharacterized membrane protein MJ0091; lipid cubic phase, cation protein complex, sodium,calcium EX membrane protein; HET: OLC MYS 1PE; 1.90A {Methanocaldococcus jannaschii} PDB: 3v5s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-47 Score=378.88 Aligned_cols=293 Identities=18% Similarity=0.180 Sum_probs=242.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhC--Ccccchhhhhcc-chhHHHHHHHHhhcCCcceehhhhhhHHHHHHHHHH
Q 012820 107 WVFALSLLGLAPLAERVSFLTEQIAYFTG--PTVGGLMNATCG-NATELIIALFALYENKIHVLKYSLLGSVLSNLLLVL 183 (456)
Q Consensus 107 ~vF~~~~laiipla~~l~~a~e~la~~~G--~~vGGll~a~~g-n~pElivsi~Al~~g~~~ia~gsilGSil~nllLvl 183 (456)
..|+++++.+++.++++++++|++|+++| +.+.|++++++| |+||+++++.|..+|++|+++||++|||++|+++++
T Consensus 7 ~~l~~g~~~l~~~a~~lv~~~~~la~~lgis~~viGltiva~GTSlPEl~vsi~A~~~g~~diaiGnivGSni~nillvl 86 (320)
T 3v5u_A 7 GYFLLGLILLYYGSDWFVLGSERIARHFNVSNFVIGATVMAIGTSLPEILTSAYASYMHAPGISIGNAIGSCICNIGLVL 86 (320)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTBCHHHHHHTHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHcccHHHHHHHHHHhCCCCceeeeeecchHHHHHHHHH
Confidence 45788999999999999999999999999 899999999999 799999999999999999999999999999999999
Q ss_pred HHHHHhccccccccccccchhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccchhHHHHHHHHHHHHHHHHhh
Q 012820 184 GTSLLCGGLANIREEQRYDRKQADVNSLLLLLGLLCQMLPLLFRYAAEPGTFPADSILQLSRASSILMLLAYVAYIFFQL 263 (456)
Q Consensus 184 G~~~l~gg~~~~~~~q~~~~~~a~~~~~ll~lav~~lllP~~~~~~~~~~~~~~~~~~~lsr~~siiLl~~Y~~yl~f~l 263 (456)
|++.++++++ .++.+.+ + ..+++++.+.+ ++ + ..| + ++|++|++|+.+|+.|++|++
T Consensus 87 G~~~li~p~~---v~~~~~~-d----~~~~l~~~~~l-~~--~---------~~~--g-is~~~g~~Ll~~Y~~yl~~~~ 143 (320)
T 3v5u_A 87 GLSAIISPII---VDKNLQK-N----ILVYLLFVIFA-AV--I---------GID--G-FSWIDGVVLLILFIIYLRWTV 143 (320)
T ss_dssp HHHHHHSCBC---CCHHHHH-H----HHHHHHHHHHH-HH--H---------TTT--C-BCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcccc---ccHHHHH-H----HHHHHHHHHHH-HH--H---------HHc--c-cHHHHHHHHHHHHHHHHHHHH
Confidence 9999999875 2333322 2 22233332221 11 1 123 3 899999999999999999999
Q ss_pred hhccccccCCCCCcchhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHhHHHhHhhhCCCccceeeehhhhccchhHHHH
Q 012820 264 KTHRKLFESQEEDEDEDEEKAVIGFWSAFSWLVGMTAIIAVLSEYVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAG 343 (456)
Q Consensus 264 ~th~~~f~~~~~~~~~~~e~~~~s~~~~i~~Lvi~~~~i~~~a~~lV~si~~ia~~~gis~~~iGlillpi~tslpE~~~ 343 (456)
++|++. ++ + +|++++.+.++.+.+++++++++..+++++|++++.+++.+|+|+.++|+|++|++||+||+++
T Consensus 144 ~~~~~~----~~-~--~~~~~~~~~~~~~~~l~~~l~~l~~~a~~lv~~~~~ia~~~gis~~~iGltlva~gtslPE~~~ 216 (320)
T 3v5u_A 144 KNGSAE----IE-E--NNDKNNPSVVFSLVLLIIGLIGVLVGAELFVDGAKKIALALDISDKVIGFTLVAFGTSLPELMV 216 (320)
T ss_dssp HHTBC--------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHTHHHHHTHHHHHH
T ss_pred Hhcccc----cc-c--ccccccccHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHhCCchHHHHHHHHHHHhccHHHHH
Confidence 998751 11 1 1223345678889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCccHHHHHhhHHHHHHHhHHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHhCCccchHHHHHHH
Q 012820 344 SIIFAFKNKLDISLGVALGSATQISMFVVPLCVVIAWIIGVYMDLDFSLLETGSLAFTIIIVAFTLQDGTSHYMKGVVLF 423 (456)
Q Consensus 344 ai~aa~kg~~dlaig~~iGS~i~~~l~vip~~vli~~~~g~~~~l~f~~~~~~~l~lsvl~~~~~~~~g~~~~~~G~~Ll 423 (456)
++.++|||+.|+|+||++|||+||+++++|+..++. |++++ .+|...++.+.+++.+.++|||.+|+||.+|+
T Consensus 217 sv~aa~~g~~~laig~iiGS~ifn~~~v~g~~~li~-----p~~~~--~~d~~~~l~~~~ll~~~~~~~~i~~~eG~~ll 289 (320)
T 3v5u_A 217 SLAAAKRNLGGMVLGNVIGSNIADIGGALAVGSLFM-----HLPAE--NVQMAVLVIMSLLLYLFAKYSKIGRWQGILFL 289 (320)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTHHHHHHHHS-----CBCCC--HHHHHHHHHHHHHHHHHHHHSCBSHHHHHHHH
T ss_pred HHHHHHcCCCcHHHHHHHhHHHHHHHHHHHHHHhhc-----cccch--HHHHHHHHHHHHHHHHHHhCCcCcHHHHHHHH
Confidence 999999999999999999999999999999988875 45543 56665544444444447789999999999999
Q ss_pred HHHHH-HHHHHHHc
Q 012820 424 LCYIA-IAACFFVH 436 (456)
Q Consensus 424 ~~Y~i-~~~~~~~~ 436 (456)
++|++ |+...+..
T Consensus 290 ~~Y~~~y~~~~~~~ 303 (320)
T 3v5u_A 290 ALYIIAIASLRMGG 303 (320)
T ss_dssp HHHHHHHHHSCSSC
T ss_pred HHHHHHHHHHHHHh
Confidence 99999 98776643
|
| >3v5u_A Uncharacterized membrane protein MJ0091; lipid cubic phase, cation protein complex, sodium,calcium EX membrane protein; HET: OLC MYS 1PE; 1.90A {Methanocaldococcus jannaschii} PDB: 3v5s_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00