Citrus Sinensis ID: 012894
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 454 | 2.2.26 [Sep-21-2011] | |||||||
| B9SQI7 | 527 | Probable bifunctional met | N/A | no | 0.914 | 0.787 | 0.816 | 0.0 | |
| B9N1F9 | 504 | Probable bifunctional met | yes | no | 0.885 | 0.797 | 0.806 | 0.0 | |
| E0CSI1 | 517 | Probable bifunctional met | yes | no | 0.916 | 0.804 | 0.762 | 0.0 | |
| E0CTF3 | 531 | Probable bifunctional met | no | no | 0.922 | 0.789 | 0.726 | 0.0 | |
| Q9FN41 | 507 | Probable bifunctional met | yes | no | 0.867 | 0.777 | 0.751 | 1e-178 | |
| Q2R483 | 518 | Probable bifunctional met | yes | no | 0.887 | 0.777 | 0.704 | 1e-173 | |
| C6JS30 | 517 | Probable bifunctional met | N/A | no | 0.894 | 0.785 | 0.673 | 1e-171 | |
| B8BKI7 | 518 | Probable bifunctional met | N/A | no | 0.887 | 0.777 | 0.7 | 1e-171 | |
| B4G0F3 | 517 | Probable bifunctional met | N/A | no | 0.896 | 0.787 | 0.662 | 1e-166 | |
| A9RBS1 | 505 | Probable bifunctional met | N/A | no | 0.845 | 0.760 | 0.641 | 1e-149 |
| >sp|B9SQI7|MTBC_RICCO Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 OS=Ricinus communis GN=RCOM_0591060 PE=3 SV=1 | Back alignment and function desciption |
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Score = 687 bits (1774), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/419 (81%), Positives = 376/419 (89%), Gaps = 4/419 (0%)
Query: 7 NGGGGAAAATHTQAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKP 66
NGG A +QAYLE +AVKETRVLIS+LCR FY LGWVSGTGGSITIKVHDDSIPKP
Sbjct: 12 NGGVKVA----SQAYLESKAVKETRVLISDLCRQFYNLGWVSGTGGSITIKVHDDSIPKP 67
Query: 67 QQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKR 126
QLILMSPSGVQKERMEPEDMYVL+ NG+ LSSPSPKPYPHKPPKCSDC PLF+KAYE
Sbjct: 68 NQLILMSPSGVQKERMEPEDMYVLAANGSILSSPSPKPYPHKPPKCSDCGPLFLKAYEMC 127
Query: 127 DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENEL 186
+AGAVIHSHG+ESCLVTMINP+SKEF+ITHMEMIKGIKGHGYYDELVVPIIENTAYENEL
Sbjct: 128 NAGAVIHSHGMESCLVTMINPLSKEFKITHMEMIKGIKGHGYYDELVVPIIENTAYENEL 187
Query: 187 TDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWST 246
TDSLAKAI+ YPK TAVLVRNHGIY+WGDSWI+AKTQAECYHYLFDAAIKLHQLGLDWST
Sbjct: 188 TDSLAKAIEEYPKTTAVLVRNHGIYIWGDSWISAKTQAECYHYLFDAAIKLHQLGLDWST 247
Query: 247 PNHGPTRNFKLGLGSNGNVNTSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISFVSEVLF 306
PNHG +N K +GSN ++NTS KA + S++G P CIVLDIEGTTTPI+FV++VLF
Sbjct: 248 PNHGLIQNVKALIGSNRDINTSVKAGLKDSNHGMQSLPGCIVLDIEGTTTPITFVADVLF 307
Query: 307 PYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEEVIAALV 366
PYARDNVG+HL TY+TAETQDDIKLLR+QVEDDL +GV AV IPP DAGKEEVIAALV
Sbjct: 308 PYARDNVGRHLYATYETAETQDDIKLLRTQVEDDLARGVNEAVSIPPDDAGKEEVIAALV 367
Query: 367 ANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVFSFS 425
ANV+AMIKADRKITALKQLQGHIWRTGF++NELEG V+DDVPEALEKWH+LG KV+ +S
Sbjct: 368 ANVEAMIKADRKITALKQLQGHIWRTGFQNNELEGVVYDDVPEALEKWHALGIKVYIYS 426
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Ricinus communis (taxid: 3988) EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 7EC: 7 |
| >sp|B9N1F9|MTBC_POPTR Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 OS=Populus trichocarpa GN=POPTRDRAFT_827604 PE=3 SV=1 | Back alignment and function description |
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| >sp|E0CSI1|MTBC1_VITVI Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 OS=Vitis vinifera GN=VIT_19s0014g02480 PE=2 SV=2 | Back alignment and function description |
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| >sp|E0CTF3|MTBC2_VITVI Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 2 OS=Vitis vinifera GN=VIT_12s0028g03470 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q9FN41|MTBC_ARATH Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 OS=Arabidopsis thaliana GN=At5g53850 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q2R483|MTBC_ORYSJ Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 OS=Oryza sativa subsp. japonica GN=Os11g0484000 PE=2 SV=1 | Back alignment and function description |
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| >sp|C6JS30|MTBC_SORBI Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 OS=Sorghum bicolor GN=SORBIDRAFT_0019s002010 PE=3 SV=1 | Back alignment and function description |
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| >sp|B8BKI7|MTBC_ORYSI Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 OS=Oryza sativa subsp. indica GN=OsI_36120 PE=2 SV=1 | Back alignment and function description |
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| >sp|B4G0F3|MTBC_MAIZE Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 OS=Zea mays PE=2 SV=1 | Back alignment and function description |
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| >sp|A9RBS1|MTBC_PHYPA Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_111231 PE=3 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 454 | ||||||
| 255574694 | 527 | catalytic, putative [Ricinus communis] g | 0.914 | 0.787 | 0.816 | 0.0 | |
| 356544052 | 522 | PREDICTED: probable bifunctional methylt | 0.927 | 0.806 | 0.788 | 0.0 | |
| 224128103 | 504 | predicted protein [Populus trichocarpa] | 0.885 | 0.797 | 0.806 | 0.0 | |
| 356549714 | 522 | PREDICTED: probable bifunctional methylt | 0.927 | 0.806 | 0.781 | 0.0 | |
| 388513301 | 523 | unknown [Medicago truncatula] | 0.925 | 0.803 | 0.787 | 0.0 | |
| 449446923 | 512 | PREDICTED: probable bifunctional methylt | 0.905 | 0.802 | 0.748 | 0.0 | |
| 356517132 | 518 | PREDICTED: probable bifunctional methylt | 0.903 | 0.791 | 0.791 | 0.0 | |
| 378405187 | 517 | RecName: Full=Probable bifunctional meth | 0.916 | 0.804 | 0.762 | 0.0 | |
| 356517134 | 509 | PREDICTED: probable bifunctional methylt | 0.883 | 0.787 | 0.786 | 0.0 | |
| 225461486 | 544 | PREDICTED: probable bifunctional methylt | 0.916 | 0.764 | 0.762 | 0.0 |
| >gi|255574694|ref|XP_002528256.1| catalytic, putative [Ricinus communis] gi|296439679|sp|B9SQI7.1|MTBC_RICCO RecName: Full=Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1; Includes: RecName: Full=Methylthioribulose-1-phosphate dehydratase; Short=MTRu-1-P dehydratase; Includes: RecName: Full=Enolase-phosphatase E1; AltName: Full=2,3-diketo-5-methylthio-1-phosphopentane phosphatase gi|223532342|gb|EEF34141.1| catalytic, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 687 bits (1774), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/419 (81%), Positives = 376/419 (89%), Gaps = 4/419 (0%)
Query: 7 NGGGGAAAATHTQAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKP 66
NGG A +QAYLE +AVKETRVLIS+LCR FY LGWVSGTGGSITIKVHDDSIPKP
Sbjct: 12 NGGVKVA----SQAYLESKAVKETRVLISDLCRQFYNLGWVSGTGGSITIKVHDDSIPKP 67
Query: 67 QQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKR 126
QLILMSPSGVQKERMEPEDMYVL+ NG+ LSSPSPKPYPHKPPKCSDC PLF+KAYE
Sbjct: 68 NQLILMSPSGVQKERMEPEDMYVLAANGSILSSPSPKPYPHKPPKCSDCGPLFLKAYEMC 127
Query: 127 DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENEL 186
+AGAVIHSHG+ESCLVTMINP+SKEF+ITHMEMIKGIKGHGYYDELVVPIIENTAYENEL
Sbjct: 128 NAGAVIHSHGMESCLVTMINPLSKEFKITHMEMIKGIKGHGYYDELVVPIIENTAYENEL 187
Query: 187 TDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWST 246
TDSLAKAI+ YPK TAVLVRNHGIY+WGDSWI+AKTQAECYHYLFDAAIKLHQLGLDWST
Sbjct: 188 TDSLAKAIEEYPKTTAVLVRNHGIYIWGDSWISAKTQAECYHYLFDAAIKLHQLGLDWST 247
Query: 247 PNHGPTRNFKLGLGSNGNVNTSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISFVSEVLF 306
PNHG +N K +GSN ++NTS KA + S++G P CIVLDIEGTTTPI+FV++VLF
Sbjct: 248 PNHGLIQNVKALIGSNRDINTSVKAGLKDSNHGMQSLPGCIVLDIEGTTTPITFVADVLF 307
Query: 307 PYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEEVIAALV 366
PYARDNVG+HL TY+TAETQDDIKLLR+QVEDDL +GV AV IPP DAGKEEVIAALV
Sbjct: 308 PYARDNVGRHLYATYETAETQDDIKLLRTQVEDDLARGVNEAVSIPPDDAGKEEVIAALV 367
Query: 367 ANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVFSFS 425
ANV+AMIKADRKITALKQLQGHIWRTGF++NELEG V+DDVPEALEKWH+LG KV+ +S
Sbjct: 368 ANVEAMIKADRKITALKQLQGHIWRTGFQNNELEGVVYDDVPEALEKWHALGIKVYIYS 426
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356544052|ref|XP_003540469.1| PREDICTED: probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|224128103|ref|XP_002329082.1| predicted protein [Populus trichocarpa] gi|296439678|sp|B9N1F9.1|MTBC_POPTR RecName: Full=Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1; Includes: RecName: Full=Methylthioribulose-1-phosphate dehydratase; Short=MTRu-1-P dehydratase; Includes: RecName: Full=Enolase-phosphatase E1; AltName: Full=2,3-diketo-5-methylthio-1-phosphopentane phosphatase gi|222869751|gb|EEF06882.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|356549714|ref|XP_003543236.1| PREDICTED: probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|388513301|gb|AFK44712.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|449446923|ref|XP_004141220.1| PREDICTED: probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|356517132|ref|XP_003527244.1| PREDICTED: probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
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| >gi|378405187|sp|E0CSI1.2|MTBC1_VITVI RecName: Full=Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1; Includes: RecName: Full=Methylthioribulose-1-phosphate dehydratase; Short=MTRu-1-P dehydratase; Includes: RecName: Full=Enolase-phosphatase E1; AltName: Full=2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and taxonomy information |
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| >gi|356517134|ref|XP_003527245.1| PREDICTED: probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1-like isoform 2 [Glycine max] | Back alignment and taxonomy information |
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| >gi|225461486|ref|XP_002285049.1| PREDICTED: probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1-like [Vitis vinifera] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 454 | ||||||
| TAIR|locus:2154664 | 507 | AT5G53850 [Arabidopsis thalian | 0.867 | 0.777 | 0.724 | 1.1e-158 | |
| UNIPROTKB|Q0VCJ2 | 242 | APIP "Methylthioribulose-1-pho | 0.440 | 0.826 | 0.506 | 5.1e-51 | |
| UNIPROTKB|Q96GX9 | 242 | APIP "Methylthioribulose-1-pho | 0.455 | 0.855 | 0.502 | 8.3e-51 | |
| UNIPROTKB|J3KN82 | 259 | APIP "Methylthioribulose-1-pho | 0.440 | 0.772 | 0.506 | 1.1e-50 | |
| UNIPROTKB|F1PT95 | 242 | APIP "Uncharacterized protein" | 0.482 | 0.904 | 0.481 | 1.3e-50 | |
| UNIPROTKB|C1C4M8 | 239 | apip "Methylthioribulose-1-pho | 0.440 | 0.836 | 0.515 | 1.7e-50 | |
| UNIPROTKB|C1BYA3 | 257 | apip "Methylthioribulose-1-pho | 0.458 | 0.809 | 0.502 | 4.6e-50 | |
| UNIPROTKB|F1NNC9 | 242 | APIP "Methylthioribulose-1-pho | 0.440 | 0.826 | 0.511 | 9.5e-50 | |
| RGD|1564562 | 241 | Apip "APAF1 interacting protei | 0.455 | 0.858 | 0.488 | 9.5e-50 | |
| UNIPROTKB|Q5ZLP2 | 242 | APIP "Methylthioribulose-1-pho | 0.440 | 0.826 | 0.506 | 1.2e-49 |
| TAIR|locus:2154664 AT5G53850 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1546 (549.3 bits), Expect = 1.1e-158, P = 1.1e-158
Identities = 295/407 (72%), Positives = 343/407 (84%)
Query: 19 QAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQ 78
QAYLEG+ VKET L++ELCRHFYT GWVSGTGGSIT+KVHD SIPKP+QLI+MSPSGVQ
Sbjct: 13 QAYLEGKEVKETSSLVTELCRHFYTQGWVSGTGGSITMKVHDASIPKPEQLIVMSPSGVQ 72
Query: 79 KERMEPEDMYVLSGNGTTLXXXXXXXXXXXXXXCSDCAPLFMKAYEKRDAGAVIHSHGIE 138
KERM+PEDMY+LS NG+ + C+DCAPLFMKAYE R+AGAVIHSHG+E
Sbjct: 73 KERMQPEDMYILSANGSIISTPSPKPYPNKPPKCTDCAPLFMKAYEMRNAGAVIHSHGME 132
Query: 139 SCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDSLAKAIDAYP 198
SCLVTM+NP +KEFRITHMEMIKGI+GHGYYDELVVPIIENTAYENELTDSL KAI+AYP
Sbjct: 133 SCLVTMLNPQAKEFRITHMEMIKGIQGHGYYDELVVPIIENTAYENELTDSLTKAIEAYP 192
Query: 199 KATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKLG 258
KATAVLVRNHG+Y+WGDSWI+AKTQAECYHYLFDAAIKLHQLGLD +TP+HGP R
Sbjct: 193 KATAVLVRNHGVYIWGDSWIHAKTQAECYHYLFDAAIKLHQLGLDAATPDHGPIRR---- 248
Query: 259 LGSNGNVNTSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLS 318
+++ K S Y R IVLDIEGTTTPI+FV++VLFPYAR+NVGKHL+
Sbjct: 249 -----TIHSQIK----DSQYEREWPRRWIVLDIEGTTTPITFVTDVLFPYARENVGKHLN 299
Query: 319 VTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEEVIAALVANVDAMIKADRK 378
+TY TAETQ+DIKLLR+QVE+DL++GV GAVPIP D GKE+VIAA+V+NV+AMI+ADRK
Sbjct: 300 LTYHTAETQEDIKLLRAQVEEDLREGVTGAVPIPHADEGKEKVIAAMVSNVEAMIRADRK 359
Query: 379 ITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVFSFS 425
ITALK+LQGHIWRTGFE +EL+ VF+DV +ALEKWHS G KV+ +S
Sbjct: 360 ITALKELQGHIWRTGFECDELKAIVFEDVADALEKWHSSGIKVYIYS 406
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| UNIPROTKB|Q0VCJ2 APIP "Methylthioribulose-1-phosphate dehydratase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q96GX9 APIP "Methylthioribulose-1-phosphate dehydratase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|J3KN82 APIP "Methylthioribulose-1-phosphate dehydratase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1PT95 APIP "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|C1C4M8 apip "Methylthioribulose-1-phosphate dehydratase" [Rana catesbeiana (taxid:8400)] | Back alignment and assigned GO terms |
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| UNIPROTKB|C1BYA3 apip "Methylthioribulose-1-phosphate dehydratase" [Esox lucius (taxid:8010)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1NNC9 APIP "Methylthioribulose-1-phosphate dehydratase" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| RGD|1564562 Apip "APAF1 interacting protein" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q5ZLP2 APIP "Methylthioribulose-1-phosphate dehydratase" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9FN41 | MTBC_ARATH | 3, ., 1, ., 3, ., 7, 7 | 0.7518 | 0.8678 | 0.7771 | yes | no |
| B9N1F9 | MTBC_POPTR | 3, ., 1, ., 3, ., 7, 7 | 0.8067 | 0.8854 | 0.7976 | yes | no |
| E0CSI1 | MTBC1_VITVI | 3, ., 1, ., 3, ., 7, 7 | 0.7623 | 0.9162 | 0.8046 | yes | no |
| B9SQI7 | MTBC_RICCO | 3, ., 1, ., 3, ., 7, 7 | 0.8162 | 0.9140 | 0.7874 | N/A | no |
| Q2R483 | MTBC_ORYSJ | 3, ., 1, ., 3, ., 7, 7 | 0.7048 | 0.8876 | 0.7779 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.1.3 | LOW CONFIDENCE prediction! |
| 4th Layer | 4.2.1.109 | LOW CONFIDENCE prediction! |
| 3rd Layer | 4.2.1 | LOW CONFIDENCE prediction! |
| 3rd Layer | 3.1.3.77 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | estExt_fgenesh4_pg.C_1070035 | hypothetical protein (504 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
 | estExt_Genewise1_v1.C_LG_VIII2401 | • | • | • | • | 0.973 | |||||
 | estExt_Genewise1_v1.C_LG_VIII0915 | • | • | • | • | 0.973 | |||||
 | estExt_fgenesh4_pm.C_LG_VI0635 | • | • | • | • | • | 0.812 | ||||
 | eugene3.79220002 | • | • | 0.426 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 454 | |||
| TIGR03328 | 193 | TIGR03328, salvage_mtnB, methylthioribulose-1-phos | 5e-83 | |
| smart01007 | 185 | smart01007, Aldolase_II, Class II Aldolase and Add | 1e-37 | |
| pfam00596 | 181 | pfam00596, Aldolase_II, Class II Aldolase and Addu | 9e-35 | |
| COG0235 | 219 | COG0235, AraD, Ribulose-5-phosphate 4-epimerase an | 4e-32 | |
| PRK06754 | 208 | PRK06754, mtnB, methylthioribulose-1-phosphate deh | 2e-29 | |
| TIGR01691 | 220 | TIGR01691, enolase-ppase, 2,3-diketo-5-methylthio- | 2e-28 | |
| COG4229 | 229 | COG4229, COG4229, Predicted enolase-phosphatase [E | 3e-27 | |
| cd00398 | 209 | cd00398, Aldolase_II, Class II Aldolase and Adduci | 1e-20 | |
| PRK09220 | 204 | PRK09220, PRK09220, methylthioribulose-1-phosphate | 1e-15 | |
| PRK06833 | 214 | PRK06833, PRK06833, L-fuculose phosphate aldolase; | 3e-08 | |
| PRK08130 | 213 | PRK08130, PRK08130, putative aldolase; Validated | 1e-06 | |
| PRK06755 | 209 | PRK06755, PRK06755, hypothetical protein; Validate | 6e-06 | |
| TIGR01086 | 214 | TIGR01086, fucA, L-fuculose phosphate aldolase | 3e-05 | |
| PRK08087 | 215 | PRK08087, PRK08087, L-fuculose phosphate aldolase; | 4e-05 | |
| PRK06557 | 221 | PRK06557, PRK06557, L-ribulose-5-phosphate 4-epime | 3e-04 | |
| pfam13419 | 176 | pfam13419, HAD_2, Haloacid dehalogenase-like hydro | 8e-04 | |
| TIGR01549 | 162 | TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase sup | 0.002 |
| >gnl|CDD|234168 TIGR03328, salvage_mtnB, methylthioribulose-1-phosphate dehydratase | Back alignment and domain information |
|---|
Score = 253 bits (648), Expect = 5e-83
Identities = 71/209 (33%), Positives = 107/209 (51%), Gaps = 18/209 (8%)
Query: 34 ISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGN 93
+ E R Y GWV GTGG++ S + IL++PSGV K R+ PED V+
Sbjct: 1 LIEAGRDLYKRGWVPGTGGNL-------SARLDEDEILITPSGVDKGRLTPEDFLVVDLQ 53
Query: 94 GTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEF 152
G +S P S L + Y AGAV+H+H +E+ +++ + P + F
Sbjct: 54 GKPVSGG-------LKP--SAETLLHTQLYRLTPGAGAVLHTHSVEATVLSRLYPSNGAF 104
Query: 153 RITHMEMIKGIKG-HGYYDELVVPIIENTAYENELTDSLAKAIDAYPKATAVLVRNHGIY 211
+ EM+K + G + D+L +PI ENT L DS+A ++AYP VL+R HG+Y
Sbjct: 105 ELEGYEMLKALPGITTHEDKLTIPIFENTQDIARLADSVAPYLEAYPDVPGVLIRGHGLY 164
Query: 212 VWGDSWINAKTQAECYHYLFDAAIKLHQL 240
WG W AK E +LF+ +++ +L
Sbjct: 165 AWGRDWEEAKRHLEALEFLFECELEMLKL 193
|
Members of this family are the methylthioribulose-1-phosphate dehydratase of the methionine salvage pathway. This pathway allows methylthioadenosine, left over from polyamine biosynthesis, to be recycled to methionine [Amino acid biosynthesis, Aspartate family]. Length = 193 |
| >gnl|CDD|214970 smart01007, Aldolase_II, Class II Aldolase and Adducin N-terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|216015 pfam00596, Aldolase_II, Class II Aldolase and Adducin N-terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|223313 COG0235, AraD, Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|180679 PRK06754, mtnB, methylthioribulose-1-phosphate dehydratase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|233533 TIGR01691, enolase-ppase, 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
| >gnl|CDD|226682 COG4229, COG4229, Predicted enolase-phosphatase [Energy production and conversion] | Back alignment and domain information |
|---|
| >gnl|CDD|238232 cd00398, Aldolase_II, Class II Aldolase and Adducin head (N-terminal) domain | Back alignment and domain information |
|---|
| >gnl|CDD|236415 PRK09220, PRK09220, methylthioribulose-1-phosphate dehydratase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|180717 PRK06833, PRK06833, L-fuculose phosphate aldolase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|181241 PRK08130, PRK08130, putative aldolase; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|102532 PRK06755, PRK06755, hypothetical protein; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|188107 TIGR01086, fucA, L-fuculose phosphate aldolase | Back alignment and domain information |
|---|
| >gnl|CDD|181226 PRK08087, PRK08087, L-fuculose phosphate aldolase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|235829 PRK06557, PRK06557, L-ribulose-5-phosphate 4-epimerase; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|222115 pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
| >gnl|CDD|233463 TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 454 | |||
| COG4229 | 229 | Predicted enolase-phosphatase [Energy production a | 100.0 | |
| KOG2630 | 254 | consensus Enolase-phosphatase E-1 [Amino acid tran | 100.0 | |
| PRK06833 | 214 | L-fuculose phosphate aldolase; Provisional | 100.0 | |
| PRK08087 | 215 | L-fuculose phosphate aldolase; Provisional | 100.0 | |
| cd00398 | 209 | Aldolase_II Class II Aldolase and Adducin head (N- | 100.0 | |
| PRK05874 | 217 | L-fuculose-phosphate aldolase; Validated | 100.0 | |
| PRK07490 | 245 | hypothetical protein; Provisional | 100.0 | |
| PRK06557 | 221 | L-ribulose-5-phosphate 4-epimerase; Validated | 100.0 | |
| PRK08130 | 213 | putative aldolase; Validated | 100.0 | |
| PRK08193 | 231 | araD L-ribulose-5-phosphate 4-epimerase; Reviewed | 100.0 | |
| PRK12348 | 228 | sgaE L-ribulose-5-phosphate 4-epimerase; Reviewed | 100.0 | |
| PRK06754 | 208 | mtnB methylthioribulose-1-phosphate dehydratase; R | 100.0 | |
| TIGR00760 | 231 | araD L-ribulose-5-phosphate 4-epimerase. The homol | 100.0 | |
| PRK06486 | 262 | hypothetical protein; Provisional | 100.0 | |
| TIGR01086 | 214 | fucA L-fuculose phosphate aldolase. Members of thi | 100.0 | |
| PRK12347 | 231 | sgbE L-ribulose-5-phosphate 4-epimerase; Reviewed | 100.0 | |
| PRK06755 | 209 | hypothetical protein; Validated | 100.0 | |
| PRK07090 | 260 | class II aldolase/adducin domain protein; Provisio | 100.0 | |
| PRK05834 | 194 | hypothetical protein; Provisional | 100.0 | |
| PRK13213 | 231 | araD L-ribulose-5-phosphate 4-epimerase; Reviewed | 100.0 | |
| PRK07044 | 252 | aldolase II superfamily protein; Provisional | 100.0 | |
| PRK13145 | 234 | araD L-ribulose-5-phosphate 4-epimerase; Provision | 100.0 | |
| PRK09220 | 204 | methylthioribulose-1-phosphate dehydratase; Provis | 100.0 | |
| PRK06661 | 231 | hypothetical protein; Provisional | 100.0 | |
| PRK06208 | 274 | hypothetical protein; Provisional | 100.0 | |
| TIGR03328 | 193 | salvage_mtnB methylthioribulose-1-phosphate dehydr | 100.0 | |
| PRK08333 | 184 | L-fuculose phosphate aldolase; Provisional | 100.0 | |
| PRK06357 | 216 | hypothetical protein; Provisional | 100.0 | |
| PRK08660 | 181 | L-fuculose phosphate aldolase; Provisional | 100.0 | |
| COG0235 | 219 | AraD Ribulose-5-phosphate 4-epimerase and related | 100.0 | |
| TIGR02624 | 270 | rhamnu_1P_ald rhamnulose-1-phosphate aldolase. Mem | 100.0 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 100.0 | |
| PRK03634 | 274 | rhamnulose-1-phosphate aldolase; Provisional | 100.0 | |
| PF00596 | 184 | Aldolase_II: Class II Aldolase and Adducin N-termi | 100.0 | |
| KOG2631 | 238 | consensus Class II aldolase/adducin N-terminal dom | 100.0 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.95 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.95 | |
| COG3347 | 404 | Uncharacterized conserved protein [Function unknow | 99.66 | |
| KOG3699 | 598 | consensus Cytoskeletal protein Adducin [Signal tra | 99.5 | |
| KOG3699 | 598 | consensus Cytoskeletal protein Adducin [Signal tra | 97.61 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 97.18 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.11 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 96.85 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 96.54 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 96.22 | |
| PLN02954 | 224 | phosphoserine phosphatase | 96.18 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 96.13 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 95.87 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 95.84 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 95.81 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 95.8 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 95.56 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 95.52 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 95.44 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 95.33 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 95.29 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 95.21 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 95.19 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 95.19 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 95.16 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 94.96 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 94.92 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 94.76 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 94.73 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 94.63 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 94.56 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 94.52 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 94.41 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 94.26 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 94.21 | |
| PLN02940 | 382 | riboflavin kinase | 94.2 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 93.57 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 93.56 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 93.56 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 93.53 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 93.14 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 93.13 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 93.1 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 92.19 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 91.77 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 91.54 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 91.44 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 91.01 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 90.48 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 90.16 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 89.38 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 89.14 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 89.11 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 88.32 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 88.12 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 87.78 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 87.52 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 87.35 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 86.96 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 82.71 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 81.24 |
| >COG4229 Predicted enolase-phosphatase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-49 Score=359.15 Aligned_cols=130 Identities=37% Similarity=0.597 Sum_probs=117.8
Q ss_pred CCeEEEEeeecccccccccccccchhhhhhhhhHHhhccCChhhHHHHHHHHHHhHHhhhcccCCcccCCCCCCChHHHH
Q 012894 283 FPRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEEVI 362 (454)
Q Consensus 283 ~~~~illDIEGTt~~isFV~d~LFPYa~~~l~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (454)
+.++||||||||||||||||||||||++++|++|+++||++++++.++++++++.- .+.. .
T Consensus 3 m~kaiLlDIEGTv~~iSFVkdvlFPYa~~~lp~fv~e~~e~~~v~~~v~~v~~e~g----------------~~~s---~ 63 (229)
T COG4229 3 MVKAILLDIEGTVSPISFVKDVLFPYAARKLPDFVRENTEDSEVKKIVDEVLSEFG----------------IANS---E 63 (229)
T ss_pred chhhheeeccccccchhHHHhhhhHHHHHHhHHHHHhhccCChhhHHHHHHHHHhC----------------ccch---H
Confidence 45899999999999999999999999999999999999999999999999887631 1111 3
Q ss_pred HHHHHHHHHHHHhccCchhHHHHHHHHhhhhccccccccccCCCHHHHHHHHHHCCCeEEEecCCcccc
Q 012894 363 AALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVFSFSFSFSCR 431 (454)
Q Consensus 363 ~~~~~~v~~~~~~D~K~t~LK~LQG~iW~~gy~~G~l~~~~y~Dv~~~l~~w~~~g~~lyiYSS~~~~~ 431 (454)
|++++.+..|+++|+|.||||+|||+||++||++|+||+|||||++++||+|++.|++||||||||+--
T Consensus 64 E~lva~~~~wiaed~K~t~lK~lQG~iWa~Gy~sgelkahlypDav~~ik~wk~~g~~vyiYSSGSV~A 132 (229)
T COG4229 64 EALVALLLEWIAEDSKDTPLKALQGMIWAHGYESGELKAHLYPDAVQAIKRWKALGMRVYIYSSGSVKA 132 (229)
T ss_pred HHHHHHHHHHHhcccccchHHHHHhHHHHhccccCccccccCHhHHHHHHHHHHcCCcEEEEcCCCchh
Confidence 566677777999999999999999999999999999999999999999999999999999999999853
|
|
| >KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PRK06833 L-fuculose phosphate aldolase; Provisional | Back alignment and domain information |
|---|
| >PRK08087 L-fuculose phosphate aldolase; Provisional | Back alignment and domain information |
|---|
| >cd00398 Aldolase_II Class II Aldolase and Adducin head (N-terminal) domain | Back alignment and domain information |
|---|
| >PRK05874 L-fuculose-phosphate aldolase; Validated | Back alignment and domain information |
|---|
| >PRK07490 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK06557 L-ribulose-5-phosphate 4-epimerase; Validated | Back alignment and domain information |
|---|
| >PRK08130 putative aldolase; Validated | Back alignment and domain information |
|---|
| >PRK08193 araD L-ribulose-5-phosphate 4-epimerase; Reviewed | Back alignment and domain information |
|---|
| >PRK12348 sgaE L-ribulose-5-phosphate 4-epimerase; Reviewed | Back alignment and domain information |
|---|
| >PRK06754 mtnB methylthioribulose-1-phosphate dehydratase; Reviewed | Back alignment and domain information |
|---|
| >TIGR00760 araD L-ribulose-5-phosphate 4-epimerase | Back alignment and domain information |
|---|
| >PRK06486 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >TIGR01086 fucA L-fuculose phosphate aldolase | Back alignment and domain information |
|---|
| >PRK12347 sgbE L-ribulose-5-phosphate 4-epimerase; Reviewed | Back alignment and domain information |
|---|
| >PRK06755 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK07090 class II aldolase/adducin domain protein; Provisional | Back alignment and domain information |
|---|
| >PRK05834 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK13213 araD L-ribulose-5-phosphate 4-epimerase; Reviewed | Back alignment and domain information |
|---|
| >PRK07044 aldolase II superfamily protein; Provisional | Back alignment and domain information |
|---|
| >PRK13145 araD L-ribulose-5-phosphate 4-epimerase; Provisional | Back alignment and domain information |
|---|
| >PRK09220 methylthioribulose-1-phosphate dehydratase; Provisional | Back alignment and domain information |
|---|
| >PRK06661 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK06208 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >TIGR03328 salvage_mtnB methylthioribulose-1-phosphate dehydratase | Back alignment and domain information |
|---|
| >PRK08333 L-fuculose phosphate aldolase; Provisional | Back alignment and domain information |
|---|
| >PRK06357 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK08660 L-fuculose phosphate aldolase; Provisional | Back alignment and domain information |
|---|
| >COG0235 AraD Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR02624 rhamnu_1P_ald rhamnulose-1-phosphate aldolase | Back alignment and domain information |
|---|
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
| >PRK03634 rhamnulose-1-phosphate aldolase; Provisional | Back alignment and domain information |
|---|
| >PF00596 Aldolase_II: Class II Aldolase and Adducin N-terminal domain; InterPro: IPR001303 This entry represents the alpha/beta/alpha domain found in class II aldolases and adducin, usually at the N terminus | Back alignment and domain information |
|---|
| >KOG2631 consensus Class II aldolase/adducin N-terminal domain protein [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
| >COG3347 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG3699 consensus Cytoskeletal protein Adducin [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG3699 consensus Cytoskeletal protein Adducin [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
| >PHA02597 30 | Back alignment and domain information |
|---|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 454 | ||||
| 1yns_A | 261 | Crystal Structure Of Human Enolase-Phosphatase E1 A | 1e-30 | ||
| 1zs9_A | 261 | Crystal Structure Of Human Enolase-Phosphatase E1 L | 2e-29 | ||
| 2irp_A | 208 | Crystal Structure Of The L-fuculose-1-phosphate Ald | 2e-10 | ||
| 2g80_A | 253 | Crystal Structure Of Utr4 Protein (Unknown Transcri | 7e-09 | ||
| 1e46_P | 215 | L-Fuculose 1-Phosphate Aldolase From Escherichia Co | 3e-04 | ||
| 1e48_P | 215 | L-Fuculose 1-Phosphate Aldolase From Escherichia Co | 5e-04 | ||
| 1e47_P | 215 | L-Fuculose 1-Phosphate Aldolase From Escherichia Co | 5e-04 | ||
| 1dzv_P | 215 | L-Fuculose-1-Phosphate Aldolase From Escherichia Co | 7e-04 | ||
| 1dzz_P | 215 | L-Fuculose-1-Phosphate Aldolase From Escherichia Co | 7e-04 | ||
| 1dzy_P | 215 | L-Fuculose-1-Phosphate Aldolase From Escherichia Co | 7e-04 | ||
| 1fua_A | 215 | L-Fuculose 1-Phosphate Aldolase Crystal Form T Leng | 7e-04 | ||
| 1dzx_P | 215 | L-Fuculose-1-Phosphate Aldolase From Escherichia Co | 7e-04 | ||
| 1dzw_P | 215 | L-Fuculose-1-Phosphate Aldolase From Escherichia Co | 7e-04 |
| >pdb|1YNS|A Chain A, Crystal Structure Of Human Enolase-Phosphatase E1 And Its Complex With A Substrate Analog Length = 261 | Back alignment and structure |
|
| >pdb|1ZS9|A Chain A, Crystal Structure Of Human Enolase-Phosphatase E1 Length = 261 | Back alignment and structure |
| >pdb|2IRP|A Chain A, Crystal Structure Of The L-fuculose-1-phosphate Aldolase (aq_1979) From Aquifex Aeolicus Vf5 Length = 208 | Back alignment and structure |
| >pdb|2G80|A Chain A, Crystal Structure Of Utr4 Protein (Unknown Transcript 4 Protein) (Yel038w) From Saccharomyces Cerevisiae At 2.28 A Resolution Length = 253 | Back alignment and structure |
| >pdb|1E46|P Chain P, L-Fuculose 1-Phosphate Aldolase From Escherichia Coli Mutant E73s Length = 215 | Back alignment and structure |
| >pdb|1E48|P Chain P, L-Fuculose 1-Phosphate Aldolase From Escherichia Coli Mutant E73qY113FY209F Length = 215 | Back alignment and structure |
| >pdb|1E47|P Chain P, L-Fuculose 1-Phosphate Aldolase From Escherichia Coli Mutant E73q Length = 215 | Back alignment and structure |
| >pdb|1DZV|P Chain P, L-Fuculose-1-Phosphate Aldolase From Escherichia Coli Mutant Y113fY209F Length = 215 | Back alignment and structure |
| >pdb|1DZZ|P Chain P, L-Fuculose-1-Phosphate Aldolase From Escherichia Coli Mutant Y113f Length = 215 | Back alignment and structure |
| >pdb|1DZY|P Chain P, L-Fuculose-1-Phosphate Aldolase From Escherichia Coli Mutant E214a Length = 215 | Back alignment and structure |
| >pdb|1FUA|A Chain A, L-Fuculose 1-Phosphate Aldolase Crystal Form T Length = 215 | Back alignment and structure |
| >pdb|1DZX|P Chain P, L-Fuculose-1-Phosphate Aldolase From Escherichia Coli Mutant R212a Length = 215 | Back alignment and structure |
| >pdb|1DZW|P Chain P, L-Fuculose-1-Phosphate Aldolase From Escherichia Coli Mutant F131a Length = 215 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus} Length = 208 | Back alignment and structure |
|---|
Score = 215 bits (550), Expect = 3e-68
Identities = 48/216 (22%), Positives = 86/216 (39%), Gaps = 20/216 (9%)
Query: 28 KETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDM 87
E I E R ++ GWV T G+I+ KV ++ I ++ SG K ++ PED+
Sbjct: 10 SEKVEEIIEAGRILHSRGWVPATSGNISAKVSEE-------YIAITASGKHKGKLTPEDI 62
Query: 88 YVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMIN 146
++ G + P S L Y+ + AV+H+H + +++++
Sbjct: 63 LLIDYEGRPVGGGKP----------SAETLLHTTVYKLFPEVNAVVHTHSPNATVISIVE 112
Query: 147 PMSKEFRITHMEMIKGIKG-HGYYDELVVPIIENTAYENELTDSLAKAIDAYPKATAVLV 205
+ E++K H + ++ +PI N L + L+
Sbjct: 113 K-KDFVELEDYELLKAFPDIHTHEVKIKIPIFPNEQNIPLLAKEVENYFKTSEDKYGFLI 171
Query: 206 RNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLG 241
R HG+Y WG S A E ++F+ +KL
Sbjct: 172 RGHGLYTWGRSMEEALIHTEALEFIFECELKLLSFH 207
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A Length = 261 | Back alignment and structure |
|---|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 Length = 253 | Back alignment and structure |
|---|
| >2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A Length = 200 | Back alignment and structure |
|---|
| >1k0w_A L-ribulose 5 phosphate 4-epimerase; aldolase, isomerase; 2.10A {Escherichia coli} SCOP: c.74.1.1 PDB: 1jdi_A Length = 231 | Back alignment and structure |
|---|
| >1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P Length = 215 | Back alignment and structure |
|---|
| >2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron} Length = 212 | Back alignment and structure |
|---|
| >1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1 Length = 238 | Back alignment and structure |
|---|
| >2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A Length = 274 | Back alignment and structure |
|---|
| >2z7b_A MLR6791 protein; class II aldolase superfamily, lyase; 1.90A {Mesorhizobium loti} Length = 270 | Back alignment and structure |
|---|
| >3m4r_A Uncharacterized protein; short chain dehydrogenase, class II aldolase, adducin head D carbohydrate metabolism, structural genomics; 2.00A {Thermoplasma acidophilum} Length = 222 | Back alignment and structure |
|---|
| >3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV} Length = 273 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 454 | |||
| 1e4c_P | 215 | L-fuculose 1-phosphate aldolase; aldolase (class I | 100.0 | |
| 2irp_A | 208 | Putative aldolase class 2 protein AQ_1979; aldehyd | 100.0 | |
| 3ocr_A | 273 | Class II aldolase/adducin domain protein; PSI-2, m | 100.0 | |
| 2opi_A | 212 | L-fuculose-1-phosphate aldolase; L-fuculose-1-phos | 100.0 | |
| 1k0w_A | 231 | L-ribulose 5 phosphate 4-epimerase; aldolase, isom | 100.0 | |
| 2fk5_A | 200 | Fuculose-1-phosphate aldolase; class II aldolase, | 100.0 | |
| 2v9l_A | 274 | Rhamnulose-1-phosphate aldolase; entropy index, me | 100.0 | |
| 1pvt_A | 238 | Sugar-phosphate aldolase; structural genomics, PSI | 100.0 | |
| 2z7b_A | 270 | MLR6791 protein; class II aldolase superfamily, ly | 100.0 | |
| 3m4r_A | 222 | Uncharacterized protein; short chain dehydrogenase | 100.0 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 99.69 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 99.26 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 97.26 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 97.06 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 97.0 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 96.99 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 96.82 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 96.79 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 96.66 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 96.66 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 96.59 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 96.57 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 96.53 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 96.52 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 96.46 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 96.42 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 96.15 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 96.13 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 96.11 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 96.08 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 96.05 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 96.05 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 96.05 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 96.0 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 95.94 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 95.86 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 95.85 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 95.77 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 95.7 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 95.68 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 95.64 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 95.63 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 95.6 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 95.54 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 95.52 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 95.47 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 95.46 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 95.43 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 95.39 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 95.33 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 95.17 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 95.17 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 95.17 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 95.16 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 95.15 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 95.14 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 95.13 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 94.96 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 94.93 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 94.88 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 94.81 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 94.73 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 94.7 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 94.64 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 94.61 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 94.51 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 94.44 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 94.28 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 93.94 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 93.81 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 93.81 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 93.73 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 93.71 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 93.66 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 93.56 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 93.39 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 93.26 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 93.24 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 92.7 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 90.6 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 90.0 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 89.49 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 89.13 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 88.81 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 88.45 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 87.73 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 86.88 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 86.27 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 86.17 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 85.85 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 85.24 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 82.98 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 80.73 |
| >1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-43 Score=336.68 Aligned_cols=204 Identities=22% Similarity=0.320 Sum_probs=179.1
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCccccCceEEEEeCCCCCCCCccEEEEeCCCCCCCCCCCCCEEEEeCCCCcccCCCCCC
Q 012894 25 RAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKP 104 (454)
Q Consensus 25 ~~~~~~r~eLa~a~R~L~~~Gl~~~~~GNISvRv~~~~~~~~~~~flItpSG~~~~~l~~eDlv~VdldG~~v~g~~~~P 104 (454)
|+.+++|++|++++|+|+++||+.+++||||+|+++ .|||||||.+|++++++||++||+||++++|. +|
T Consensus 1 m~~~~~r~~l~~~~r~l~~~gl~~~~~GNiS~R~~~--------~~lItpsG~~~~~l~~~dlv~vd~~G~~~~g~--~p 70 (215)
T 1e4c_P 1 MERNKLARQIIDTCLEMTRLGLNQGTAGNVSVRYQD--------GMLITPTGIPYEKLTESHIVFIDGNGKHEEGK--LP 70 (215)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTSCCTTCCEEEEEETT--------EEEECCTTCCGGGCCGGGCEEECTTCCBCTTC--CC
T ss_pred CCHHHHHHHHHHHHHHHHHCcCCCCCCCeEEEEeCC--------cEEEeCCCCCcccCCHHHEEEEcCCCCCCCCC--CC
Confidence 456789999999999999999999999999999986 69999999999999999999999999999874 24
Q ss_pred CCCCCCCCCccHHHHHHHHhhC-CccEEEecCChHHHHHHhhcCCCcccccchHHHHhhhhCCccccccceeeeeCC-CC
Q 012894 105 YPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-AY 182 (454)
Q Consensus 105 ~~~~P~~~S~E~~lH~~IYr~r-dv~aVvHtHp~~~~ala~~~~~~~~lp~~~~e~~~~~~G~~~~~~~~VPiv~~~-p~ 182 (454)
|+|+.+|+.|||.| |++||+|+||+++++||+.+.. +|+.++ +...++|. .||+++|. |+
T Consensus 71 --------Sse~~lH~~iy~~rpdv~aVvHtHs~~~~a~s~~~~~---l~~~~~-~~~~~~~~------~ip~~~y~~~g 132 (215)
T 1e4c_P 71 --------QSEWRFHMAAYQSRPDANAVVHNHAVHCTAVSILNRS---IPAIHY-MIAAAGGN------SIPCAPYATFG 132 (215)
T ss_dssp --------CTTHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCC---BCSSSG-GGGGGTSS------CBCEECCCCTT
T ss_pred --------ChHHHHHHHHHHhCCCCCEEEEcCcHHHHHHHHhCCC---CCcccH-HHHHhCCC------CcceeeCCCCC
Confidence 89999999999998 9999999999999999999864 443332 33334321 49999995 78
Q ss_pred cHHHHHHHHHHHhcCCCCeEEEEcCCceEEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhhhhhccc
Q 012894 183 ENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKLGL 259 (454)
Q Consensus 183 ~~ela~~ia~~L~~~p~~~aVLL~nHGvlv~G~sl~eA~~~~e~LE~~A~i~l~A~~~G~~~~~~~~~~~~~~~~~~ 259 (454)
+.++++.++++|++ .++|||+|||+++||+|+++||.+++.+|++|++++.++++|.+....++++++++...+
T Consensus 133 ~~~la~~i~~~l~~---~~avll~nHG~~~~G~~~~eA~~~~~~lE~~a~~~~~a~~~g~~~~~l~~~~~~~~~~~~ 206 (215)
T 1e4c_P 133 TRELSEHVALALKN---RKATLLQHHGLIACEVNLEKALWLAHEVEVLAQLYLTTLAITDPVPVLSDEEIAVVLEKF 206 (215)
T ss_dssp CHHHHHHHHHHTSS---CSEEEETTTEEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCSSCCCCCHHHHHHHHHHC
T ss_pred cHHHHHHHHHHhcc---CCEEEEcCCCcEEEeCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHH
Confidence 89999999999985 799999999999999999999999999999999999999999885567777888887543
|
| >2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
| >3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
| >2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
| >1k0w_A L-ribulose 5 phosphate 4-epimerase; aldolase, isomerase; 2.10A {Escherichia coli} SCOP: c.74.1.1 PDB: 1jdi_A | Back alignment and structure |
|---|
| >2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A | Back alignment and structure |
|---|
| >2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A | Back alignment and structure |
|---|
| >1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1 | Back alignment and structure |
|---|
| >2z7b_A MLR6791 protein; class II aldolase superfamily, lyase; 1.90A {Mesorhizobium loti} | Back alignment and structure |
|---|
| >3m4r_A Uncharacterized protein; short chain dehydrogenase, class II aldolase, adducin head D carbohydrate metabolism, structural genomics; 2.00A {Thermoplasma acidophilum} | Back alignment and structure |
|---|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 454 | ||||
| d1pvta_ | 232 | c.74.1.1 (A:) Putative sugar-phosphate aldolase {T | 2e-25 | |
| d1k0wa_ | 223 | c.74.1.1 (A:) L-ribulose-5-phosphate 4-epimerase { | 3e-24 | |
| d1ojra_ | 274 | c.74.1.1 (A:) L-rhamnulose-1-phosphate aldolase {E | 4e-18 | |
| d1e4cp_ | 206 | c.74.1.1 (P:) L-fuculose-1-phosphate aldolase {Esc | 2e-17 | |
| d1zs9a1 | 253 | c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapien | 8e-17 | |
| d2g80a1 | 225 | c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast | 2e-11 |
| >d1pvta_ c.74.1.1 (A:) Putative sugar-phosphate aldolase {Thermotoga maritima [TaxId: 2336]} Length = 232 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: AraD/HMP-PK domain-like superfamily: AraD/HMP-PK domain-like family: AraD-like aldolase/epimerase domain: Putative sugar-phosphate aldolase species: Thermotoga maritima [TaxId: 2336]
Score = 101 bits (252), Expect = 2e-25
Identities = 32/230 (13%), Positives = 77/230 (33%), Gaps = 22/230 (9%)
Query: 28 KETRVLISELCRHFYTLGWVSGTGGSITIKVHDD--------------SIPKPQQLILMS 73
+ET I ++ G G+I++++ + P+ +L++
Sbjct: 4 RETIREIQKVAYWLAIKGLSEANAGNISVRLDERPEGYEVKSVNEYGFDYDGPEMYLLIT 63
Query: 74 PSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKR--DAGAV 131
+G + + +D + + KP + +++ + A+
Sbjct: 64 ATGSRMREVYEDDSKICLLHVLPGKHYEILHGNGKPTSEFPTHLMIHAKFKEMNPEKKAI 123
Query: 132 IHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDSLA 191
+H+H + + + +E M++ + VV + + E L
Sbjct: 124 VHTHPLNLLTLMNLEE-FQELLPKMMKIHPEVLIFFPQGISVVEFEKPGSVELGL----- 177
Query: 192 KAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLG 241
K ++ AVL HG+ +G A + E + +++ LG
Sbjct: 178 KTVEKSEGKDAVLWDKHGVVAFGKDVAEAYDRVEILEKAAEILLRVLSLG 227
|
| >d1k0wa_ c.74.1.1 (A:) L-ribulose-5-phosphate 4-epimerase {Escherichia coli [TaxId: 562]} Length = 223 | Back information, alignment and structure |
|---|
| >d1ojra_ c.74.1.1 (A:) L-rhamnulose-1-phosphate aldolase {Escherichia coli [TaxId: 562]} Length = 274 | Back information, alignment and structure |
|---|
| >d1e4cp_ c.74.1.1 (P:) L-fuculose-1-phosphate aldolase {Escherichia coli [TaxId: 562]} Length = 206 | Back information, alignment and structure |
|---|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} Length = 253 | Back information, alignment and structure |
|---|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 225 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 454 | |||
| d1e4cp_ | 206 | L-fuculose-1-phosphate aldolase {Escherichia coli | 100.0 | |
| d1ojra_ | 274 | L-rhamnulose-1-phosphate aldolase {Escherichia col | 100.0 | |
| d1pvta_ | 232 | Putative sugar-phosphate aldolase {Thermotoga mari | 100.0 | |
| d1k0wa_ | 223 | L-ribulose-5-phosphate 4-epimerase {Escherichia co | 100.0 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 99.86 | |
| d2g80a1 | 225 | Protein UTR4 {Baker's yeast (Saccharomyces cerevis | 99.63 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 97.06 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 97.0 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 96.77 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 96.76 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 96.71 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 96.69 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 96.66 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 96.47 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 96.22 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 95.57 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 95.21 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 94.99 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 94.75 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 94.69 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 94.32 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 93.65 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 93.6 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 92.13 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 88.68 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 86.45 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 84.03 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 82.55 |
| >d1e4cp_ c.74.1.1 (P:) L-fuculose-1-phosphate aldolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: AraD/HMP-PK domain-like superfamily: AraD/HMP-PK domain-like family: AraD-like aldolase/epimerase domain: L-fuculose-1-phosphate aldolase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.5e-42 Score=324.05 Aligned_cols=201 Identities=20% Similarity=0.296 Sum_probs=176.7
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCccccCceEEEEeCCCCCCCCccEEEEeCCCCCCCCCCCCCEEEEeCCCCcccCCCCCC
Q 012894 25 RAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKP 104 (454)
Q Consensus 25 ~~~~~~r~eLa~a~R~L~~~Gl~~~~~GNISvRv~~~~~~~~~~~flItpSG~~~~~l~~eDlv~VdldG~~v~g~~~~P 104 (454)
|+.+++|++|+.+||.|+++||+.+++||||+|+++ .|||||||.++++++++|++.||++|+.++|. +|
T Consensus 1 m~~~~l~~~l~~~~r~l~~~Gl~~g~~GniS~R~~d--------~~lIt~sG~~~~~l~~~dlv~v~~~g~~~~g~--~p 70 (206)
T d1e4cp_ 1 MERNKLARQIIDTCLEMTRLGLNQGTAGNVSVRYQD--------GMLITPTGIPYEKLTESHIVFIDGNGKHEEGK--LP 70 (206)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTSCCTTCCEEEEEETT--------EEEECCTTCCGGGCCGGGCEEECTTCCBCTTC--CC
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEeCC--------cEEEeCCCCChhhCCHHhcccccccccccccc--cc
Confidence 467899999999999999999999999999999976 79999999999999999999999999988764 34
Q ss_pred CCCCCCCCCccHHHHHHHHhhC-CccEEEecCChHHHHHHhhcCCCcccccchHHHHhhhhCCccccccceeeeeCC-CC
Q 012894 105 YPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-AY 182 (454)
Q Consensus 105 ~~~~P~~~S~E~~lH~~IYr~r-dv~aVvHtHp~~~~ala~~~~~~~~lp~~~~e~~~~~~G~~~~~~~~VPiv~~~-p~ 182 (454)
|+|+.+|..||+.| |++||+|+||++++++|+.... ++....+....+++ .+|+++|. |+
T Consensus 71 --------s~e~~~H~~iy~~rpdv~avvH~H~~~~~a~s~~~~~---~~~~~~~~~~~~~~-------~~~~~~y~~~g 132 (206)
T d1e4cp_ 71 --------QSEWRFHMAAYQSRPDANAVVHNHAVHCTAVSILNRS---IPAIHYMIAAAGGN-------SIPCAPYATFG 132 (206)
T ss_dssp --------CTTHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCC---BCSSSGGGGGGTSS-------CBCEECCCCTT
T ss_pred --------chhHHHHHHHHHhccCcceEEEecCcceeeehhhcCC---CCchhHHHHHHcCC-------ceeecCCcCCc
Confidence 88999999999998 9999999999999999999864 33222222111211 47888885 88
Q ss_pred cHHHHHHHHHHHhcCCCCeEEEEcCCceEEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhhhhh
Q 012894 183 ENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFK 256 (454)
Q Consensus 183 ~~ela~~ia~~L~~~p~~~aVLL~nHGvlv~G~sl~eA~~~~e~LE~~A~i~l~A~~~G~~~~~~~~~~~~~~~ 256 (454)
+.++++.+++++++ .+++||+|||+++||+|+++||.+++.+|++|++++.|+++|.+...+++++++++.
T Consensus 133 ~~~~~~~~~~~l~~---~~~~ll~nHG~~~~G~s~~eA~~~~~~lE~~a~~~l~a~~~G~~~~~l~~ee~~~~~ 203 (206)
T d1e4cp_ 133 TRELSEHVALALKN---RKATLLQHHGLIACEVNLEKALWLAHEVEVLAQLYLTTLAITDPVPVLSDEEIAVVL 203 (206)
T ss_dssp CHHHHHHHHHHTSS---CSEEEETTTEEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCSSCCCCCHHHHHHHH
T ss_pred chhHHHHHHHHHhc---CCceeecCcccEEEcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCHHHHHHHH
Confidence 99999999999986 799999999999999999999999999999999999999999998888888888875
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| >d1ojra_ c.74.1.1 (A:) L-rhamnulose-1-phosphate aldolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1pvta_ c.74.1.1 (A:) Putative sugar-phosphate aldolase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
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| >d1k0wa_ c.74.1.1 (A:) L-ribulose-5-phosphate 4-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
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| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
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| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
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| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
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| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
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| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
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| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
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| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
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| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
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| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
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| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
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| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
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| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
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| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
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| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
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