Citrus Sinensis ID: 012918

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450---
MISVAVIIIGFSADIGYILGDTKEHCSKFRGTRTRAAFVFVIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLSSNSFR
cHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHccccHHHcEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHcHHHHHHHccccccHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccccccccc
cEEEEEEEEccHHHHHHHcccccHccccccccccEEEEEEEEEEEHEEcHHcccccHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHccccccHEEccccccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcccHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccccccccc
MISVAVIIIGFSADIGYILGDTKEHCSKFRGTRTRAAFVFVIGFWLLDlanntvqgPARALLadlsgpdqrnsanAIFCSWMAVGNILgfsagasgswhrwfpfltsRACCAACGNLKAAFLVAVVFLTLCALVTIyfadevpltvnqpnhltdsapllddpqrnaiskskhdmpaapnangnkvesghesdANLKHISKkaedtngsfndgpGAVLVNLLTSLRHLPPAMHVVLIVMALTWlswfpfflfdtdwmgrevyhgdpkgndhevkfydQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVReysggiehgigaNQAIKVASLVVFTLLGFplaitysvpfAITAEltadsgggqglAIGVLNLAIVIPQMIVslgagpwdalfgggnipAFVLASLSALAGGVVatlklphlssnsfr
MISVAVIIIGFSADIGYILGDTKEHCSKFRGTRTRAAFVFVIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEdtngsfndGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATlklphlssnsfr
MISVAVIIIGFSADIGYILGDTKEHCSKFRGTRTRAAFVFVIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAfglllnsvvlgvssflIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLSSNSFR
**SVAVIIIGFSADIGYILGDTKEHCSKFRGTRTRAAFVFVIGFWLLDLANNTVQGPARALLADL*******SANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADEVPLTVN******************************************************************GAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKL*********
MISVAVIIIGFSADIGYILGDTKEHCSKFRGTRTRAAFVFVIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDT**SFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAE**A**GGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLK***L******
MISVAVIIIGFSADIGYILGDTKEHCSKFRGTRTRAAFVFVIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISK***********************ANLKHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLSSNSFR
MISVAVIIIGFSADIGYILGDTKEHCSKFRGTRTRAAFVFVIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADEVPL********************************************************************PGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHL******
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MISVAVIIIGFSADIGYILGDTKEHCSKFRGTRTRAAFVFVIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLSSNSFR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query453 2.2.26 [Sep-21-2011]
O80605594 Sucrose transport protein yes no 0.988 0.754 0.728 0.0
Q6YK44595 Sucrose transport protein yes no 0.977 0.744 0.673 1e-178
B8AF63595 Sucrose transport protein N/A no 0.977 0.744 0.673 1e-178
Q10R54538 Sucrose transport protein no no 0.885 0.745 0.547 1e-138
Q9LKH3538 Sucrose transport protein N/A no 0.885 0.745 0.547 1e-138
Q948L0506 Sucrose transport protein no no 0.849 0.760 0.496 1e-112
Q69JW3535 Sucrose transport protein no no 0.858 0.727 0.475 1e-112
Q944W2506 Sucrose transport protein N/A no 0.849 0.760 0.505 1e-112
A2X6E6535 Sucrose transport protein N/A no 0.858 0.727 0.475 1e-112
A2ZN77501 Sucrose transport protein N/A no 0.845 0.764 0.423 5e-84
>sp|O80605|SUC3_ARATH Sucrose transport protein SUC3 OS=Arabidopsis thaliana GN=SUC3 PE=1 SV=1 Back     alignment and function desciption
 Score =  677 bits (1747), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/453 (72%), Positives = 383/453 (84%), Gaps = 5/453 (1%)

Query: 1   MISVAVIIIGFSADIGYILGDTKEHCSKFRGTRTRAAFVFVIGFWLLDLANNTVQGPARA 60
           MIS+AVIIIGFSADIGY+LGD+KEHCS F+GTRTRAA VF+IGFWLLDLANNTVQGPARA
Sbjct: 140 MISIAVIIIGFSADIGYLLGDSKEHCSTFKGTRTRAAVVFIIGFWLLDLANNTVQGPARA 199

Query: 61  LLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAA 120
           LLADLSGPDQRN+ANA+FC WMA+GNILGFSAGASG W  WFPFLTSRACCAACGNLKAA
Sbjct: 200 LLADLSGPDQRNTANAVFCLWMAIGNILGFSAGASGKWQEWFPFLTSRACCAACGNLKAA 259

Query: 121 FLVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNA 180
           FL+AVVFLT+C LVTIYFA E+P T N+P  + DSAPLLDD Q   +  SK +      A
Sbjct: 260 FLLAVVFLTICTLVTIYFAKEIPFTSNKPTRIQDSAPLLDDLQSKGLEHSKLN---NGTA 316

Query: 181 NGNKVESGHESDANLKHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMAL 240
           NG K E   E D + +  + + E  + ++ DGPG+VLVNLLTSLRHLPPAMH VLIVMAL
Sbjct: 317 NGIKYER-VERDTDEQFGNSENEHQDETYVDGPGSVLVNLLTSLRHLPPAMHSVLIVMAL 375

Query: 241 TWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLI 300
           TWLSWFPFFLFDTDWMGREVYHGDP G+   ++ YDQGVREGA GLLLNSVVLG+SSFLI
Sbjct: 376 TWLSWFPFFLFDTDWMGREVYHGDPTGDSLHMELYDQGVREGALGLLLNSVVLGISSFLI 435

Query: 301 EPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVF 360
           EPMC+ +G+R+VWA+SNF VFACMA TA+IS++S+ +   GIE+ +  N+  + A+++VF
Sbjct: 436 EPMCQRMGARVVWALSNFTVFACMAGTAVISLMSLSDDKNGIEYIMRGNETTRTAAVIVF 495

Query: 361 TLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGG 420
            LLGFPLAITYSVPF++TAE+TADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWD LFGG
Sbjct: 496 ALLGFPLAITYSVPFSVTAEVTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDQLFGG 555

Query: 421 GNIPAFVLASLSALAGGVVATLKLPHLSSNSFR 453
           GN+PAFVLAS++A A GV+A  +LP LSS SF+
Sbjct: 556 GNLPAFVLASVAAFAAGVIALQRLPTLSS-SFK 587
Responsible for the transport of sucrose into the cell, with the concomitant uptake of protons (symport system). Can also transport maltose at a lesser rate. May also transport biotin. Probably involved in carpel maturation that leads to pod shatter and seed dispersal.
Arabidopsis thaliana (taxid: 3702)
>sp|Q6YK44|SUT4_ORYSJ Sucrose transport protein SUT4 OS=Oryza sativa subsp. japonica GN=SUT4 PE=2 SV=1 Back     alignment and function description
>sp|B8AF63|SUT4_ORYSI Sucrose transport protein SUT4 OS=Oryza sativa subsp. indica GN=SUT4 PE=3 SV=1 Back     alignment and function description
>sp|Q10R54|SUT1_ORYSJ Sucrose transport protein SUT1 OS=Oryza sativa subsp. japonica GN=SUT1 PE=1 SV=1 Back     alignment and function description
>sp|Q9LKH3|SUT1_ORYSI Sucrose transport protein SUT1 OS=Oryza sativa subsp. indica GN=SUT1 PE=3 SV=1 Back     alignment and function description
>sp|Q948L0|SUT3_ORYSJ Sucrose transport protein SUT3 OS=Oryza sativa subsp. japonica GN=SUT3 PE=2 SV=1 Back     alignment and function description
>sp|Q69JW3|SUT5_ORYSJ Sucrose transport protein SUT5 OS=Oryza sativa subsp. japonica GN=SUT5 PE=1 SV=1 Back     alignment and function description
>sp|Q944W2|SUT3_ORYSI Sucrose transport protein SUT3 OS=Oryza sativa subsp. indica GN=SUT3 PE=3 SV=1 Back     alignment and function description
>sp|A2X6E6|SUT5_ORYSI Sucrose transport protein SUT5 OS=Oryza sativa subsp. indica GN=SUT5 PE=3 SV=1 Back     alignment and function description
>sp|A2ZN77|SUT2_ORYSI Sucrose transport protein SUT2 OS=Oryza sativa subsp. indica GN=SUT2 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query453
21063927 607 sucrose transporter 2 [Citrus sinensis] 0.997 0.744 0.973 0.0
255558166 615 sucrose transport protein, putative [Ric 0.997 0.734 0.802 0.0
321531556 597 sucrose transporter 5 [Populus tremula x 0.991 0.752 0.796 0.0
224099731 605 sucrose proton symporter [Populus tricho 0.997 0.747 0.795 0.0
116008244 611 sucrose transporter 2B [Hevea brasiliens 0.984 0.729 0.808 0.0
356570033 600 PREDICTED: LOW QUALITY PROTEIN: sucrose 1.0 0.755 0.782 0.0
356524144 601 PREDICTED: sucrose transport protein SUC 1.0 0.753 0.780 0.0
125629442 639 Sucrose Transporter 2C [Hevea brasiliens 0.984 0.697 0.759 0.0
116008248 611 sucrose transporter 2A [Hevea brasiliens 0.986 0.731 0.804 0.0
321531558 601 sucrose transporter 6 [Populus tremula x 0.984 0.742 0.781 0.0
>gi|21063927|gb|AAM29153.1| sucrose transporter 2 [Citrus sinensis] Back     alignment and taxonomy information
 Score =  885 bits (2288), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 441/453 (97%), Positives = 442/453 (97%), Gaps = 1/453 (0%)

Query: 1   MISVAVIIIGFSADIGYILGDTKEHCSKFRGTRTRAAFVFVIGFWLLDLANNTVQGPARA 60
           MISVAVIIIGFSADIGYILGDTKEHCSKFRGTRTRAAFVFVIGFWLLDLANNTVQGPARA
Sbjct: 147 MISVAVIIIGFSADIGYILGDTKEHCSKFRGTRTRAAFVFVIGFWLLDLANNTVQGPARA 206

Query: 61  LLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAA 120
           LLADLSGPDQRNSANAI CSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAA
Sbjct: 207 LLADLSGPDQRNSANAILCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAA 266

Query: 121 FLVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNA 180
           FLVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQR AISKSKHDMPAAPNA
Sbjct: 267 FLVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRTAISKSKHDMPAAPNA 326

Query: 181 NGNKVESGHESDANLKHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMAL 240
           NGNKVESGHE DANLKHISKKAED NGSFNDGPGAVLVNLLTSLRHLPPAMHVVL+VMAL
Sbjct: 327 NGNKVESGHERDANLKHISKKAEDPNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLVVMAL 386

Query: 241 TWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLI 300
           TWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLI
Sbjct: 387 TWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLI 446

Query: 301 EPMCRWIGSRLVWAISNFIVFACMATTAIISVISVRE-YSGGIEHGIGANQAIKVASLVV 359
           EPMCRWIGSRLVWAISNFIVFACMATTAIISVISVR     GIEHGIGANQAIKVASLVV
Sbjct: 447 EPMCRWIGSRLVWAISNFIVFACMATTAIISVISVRRNILEGIEHGIGANQAIKVASLVV 506

Query: 360 FTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFG 419
           FTLLGFPLAITYSVPFAIT ELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFG
Sbjct: 507 FTLLGFPLAITYSVPFAITGELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFG 566

Query: 420 GGNIPAFVLASLSALAGGVVATLKLPHLSSNSF 452
           GGNIPAF LASLSALAGGVVATLKLPHLSSNSF
Sbjct: 567 GGNIPAFGLASLSALAGGVVATLKLPHLSSNSF 599

Source: Citrus sinensis

Species: Citrus sinensis

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255558166|ref|XP_002520110.1| sucrose transport protein, putative [Ricinus communis] gi|223540602|gb|EEF42165.1| sucrose transport protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|321531556|gb|ADW94618.1| sucrose transporter 5 [Populus tremula x Populus alba] Back     alignment and taxonomy information
>gi|224099731|ref|XP_002311596.1| sucrose proton symporter [Populus trichocarpa] gi|222851416|gb|EEE88963.1| sucrose proton symporter [Populus trichocarpa] Back     alignment and taxonomy information
>gi|116008244|gb|ABJ51932.1| sucrose transporter 2B [Hevea brasiliensis] Back     alignment and taxonomy information
>gi|356570033|ref|XP_003553197.1| PREDICTED: LOW QUALITY PROTEIN: sucrose transport protein SUC3-like [Glycine max] Back     alignment and taxonomy information
>gi|356524144|ref|XP_003530692.1| PREDICTED: sucrose transport protein SUC3-like [Glycine max] Back     alignment and taxonomy information
>gi|125629442|emb|CAM33449.1| Sucrose Transporter 2C [Hevea brasiliensis subsp. brasiliensis] Back     alignment and taxonomy information
>gi|116008248|gb|ABJ51934.1| sucrose transporter 2A [Hevea brasiliensis] Back     alignment and taxonomy information
>gi|321531558|gb|ADW94619.1| sucrose transporter 6 [Populus tremula x Populus alba] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query453
TAIR|locus:2056675594 SUT2 "AT2G02860" [Arabidopsis 0.988 0.754 0.697 9.4e-169
UNIPROTKB|Q10R54538 SUT1 "Sucrose transport protei 0.532 0.447 0.543 7.2e-124
UNIPROTKB|Q69JW3535 SUT5 "Sucrose transport protei 0.540 0.457 0.477 1.2e-106
TAIR|locus:2016069513 SUC1 "AT1G71880" [Arabidopsis 0.467 0.413 0.472 2.5e-81
TAIR|locus:2024422510 SUT4 "AT1G09960" [Arabidopsis 0.529 0.470 0.421 1.4e-80
TAIR|locus:2160732491 SUC9 "AT5G06170" [Arabidopsis 0.467 0.431 0.447 1.2e-79
TAIR|locus:2016074512 SUC5 "AT1G71890" [Arabidopsis 0.485 0.429 0.438 4.1e-79
TAIR|locus:2064253492 SUC8 "AT2G14670" [Arabidopsis 0.467 0.430 0.458 2.2e-78
TAIR|locus:2199633512 SUC2 "AT1G22710" [Arabidopsis 0.487 0.431 0.442 2.8e-78
TAIR|locus:2158352492 SUC6 "AT5G43610" [Arabidopsis 0.467 0.430 0.444 2e-77
TAIR|locus:2056675 SUT2 "AT2G02860" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1641 (582.7 bits), Expect = 9.4e-169, P = 9.4e-169
 Identities = 316/453 (69%), Positives = 368/453 (81%)

Query:     1 MISVAVIIIGFSADIGYILGDTKEHCSKFRGTRTRAAFVFVIGFWLLDLANNTVQGPARA 60
             MIS+AVIIIGFSADIGY+LGD+KEHCS F+GTRTRAA VF+IGFWLLDLANNTVQGPARA
Sbjct:   140 MISIAVIIIGFSADIGYLLGDSKEHCSTFKGTRTRAAVVFIIGFWLLDLANNTVQGPARA 199

Query:    61 LLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAA 120
             LLADLSGPDQRN+ANA+FC WMA+GNILGFSAGASG W  WFPFLTSRACCAACGNLKAA
Sbjct:   200 LLADLSGPDQRNTANAVFCLWMAIGNILGFSAGASGKWQEWFPFLTSRACCAACGNLKAA 259

Query:   121 FLVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNA 180
             FL+AVVFLT+C LVTIYFA E+P T N+P  + DSAPLLDD Q   +  SK +   A   
Sbjct:   260 FLLAVVFLTICTLVTIYFAKEIPFTSNKPTRIQDSAPLLDDLQSKGLEHSKLNNGTA--- 316

Query:   181 NGNKVESGHESDANLKHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMAL 240
             NG K E   E D + +  + + E  + ++ DGPG+VLVNLLTSLRHLPPAMH VLIVMAL
Sbjct:   317 NGIKYERV-ERDTDEQFGNSENEHQDETYVDGPGSVLVNLLTSLRHLPPAMHSVLIVMAL 375

Query:   241 TWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAXXXXXXXXXXXXXXXXI 300
             TWLSWFPFFLFDTDWMGREVYHGDP G+   ++ YDQGVREGA                I
Sbjct:   376 TWLSWFPFFLFDTDWMGREVYHGDPTGDSLHMELYDQGVREGALGLLLNSVVLGISSFLI 435

Query:   301 EPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVF 360
             EPMC+ +G+R+VWA+SNF VFACMA TA+IS++S+ +   GIE+ +  N+  + A+++VF
Sbjct:   436 EPMCQRMGARVVWALSNFTVFACMAGTAVISLMSLSDDKNGIEYIMRGNETTRTAAVIVF 495

Query:   361 TLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGG 420
              LLGFPLAITYSVPF++TAE+TADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWD LFGG
Sbjct:   496 ALLGFPLAITYSVPFSVTAEVTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDQLFGG 555

Query:   421 GNIPAFVLASLSALAGGVVATLKLPHLSSNSFR 453
             GN+PAFVLAS++A A GV+A  +LP LSS SF+
Sbjct:   556 GNLPAFVLASVAAFAAGVIALQRLPTLSS-SFK 587
GO:0005351 "sugar:hydrogen symporter activity" evidence=ISS
GO:0005886 "plasma membrane" evidence=ISM;NAS
GO:0005887 "integral to plasma membrane" evidence=IEA
GO:0008506 "sucrose:hydrogen symporter activity" evidence=ISS
GO:0008515 "sucrose transmembrane transporter activity" evidence=IEA;IGI;IDA
GO:0015144 "carbohydrate transmembrane transporter activity" evidence=ISS
GO:0015770 "sucrose transport" evidence=IEA;NAS;TAS
GO:0016020 "membrane" evidence=ISS
GO:0016021 "integral to membrane" evidence=IEA
GO:0055085 "transmembrane transport" evidence=IEA
GO:0009611 "response to wounding" evidence=IEP;RCA
GO:0090406 "pollen tube" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0009620 "response to fungus" evidence=RCA
GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA
GO:0009753 "response to jasmonic acid stimulus" evidence=RCA
GO:0010200 "response to chitin" evidence=RCA
UNIPROTKB|Q10R54 SUT1 "Sucrose transport protein SUT1" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|Q69JW3 SUT5 "Sucrose transport protein SUT5" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2016069 SUC1 "AT1G71880" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2024422 SUT4 "AT1G09960" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2160732 SUC9 "AT5G06170" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2016074 SUC5 "AT1G71890" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2064253 SUC8 "AT2G14670" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2199633 SUC2 "AT1G22710" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2158352 SUC6 "AT5G43610" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O80605SUC3_ARATHNo assigned EC number0.72840.98890.7542yesno
Q6YK44SUT4_ORYSJNo assigned EC number0.67320.97790.7445yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query453
TIGR01301477 TIGR01301, GPH_sucrose, GPH family sucrose/H+ symp 1e-132
>gnl|CDD|233349 TIGR01301, GPH_sucrose, GPH family sucrose/H+ symporter Back     alignment and domain information 
 Score =  390 bits (1004), Expect = e-132
 Identities = 187/449 (41%), Positives = 266/449 (59%), Gaps = 65/449 (14%)

Query: 2   ISVAVIIIGFSADIGYILGDTKEHCSKFRGTRTRAAFVFVIGFWLLDLANNTVQGPARAL 61
           ++ AVI+IGF+ADIG++ GD  +     + T+ RA  VFV+GFW+LD+ANN +QGP RA 
Sbjct: 84  VAFAVILIGFAADIGHLFGDNLD-----KKTKPRAIIVFVVGFWILDVANNMLQGPCRAF 138

Query: 62  LADLSGPDQRNS--ANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKA 119
           LADL+G D R +  ANA F  +MA+GN+LG++AGA    ++ FPF  + AC  +C NLK+
Sbjct: 139 LADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKS 198

Query: 120 AFLVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPN 179
            FL+ ++ L +   + +    E PL  +            D     A   SKH       
Sbjct: 199 CFLIDIILLAILTYIALSAVKENPLIGSD-----------DFINSEAAPPSKH------- 240

Query: 180 ANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMA 239
                                           G  A    L  + ++LP  + ++L+V  
Sbjct: 241 --------------------------------GEEAFFGELFGAFKYLPRPVWILLLVTC 268

Query: 240 LTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFL 299
           L W++WFPF LFDTDWMGREVY G       +   YD GVR GAFGL+LNSVVLG++S  
Sbjct: 269 LNWIAWFPFILFDTDWMGREVYGGSVN----QGAKYDDGVRAGAFGLMLNSVVLGITSIG 324

Query: 300 IEPMCRWIGS-RLVWAISNFIVFACMATTAIISVI--SVREYSGGIEHGIGANQAIKVAS 356
           +E +CR  G+ + +W I N I+  C+A T +++ +  + R Y G  E        IK ++
Sbjct: 325 MEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESL-PPPTGIKASA 383

Query: 357 LVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDA 416
           L+VF +LG PLAITYS+PFA+ +  +++ G GQGL++GVLNLAIVIPQ+IVSLG+GPWD 
Sbjct: 384 LIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQ 443

Query: 417 LFGGGNIPAFVLASLSALAGGVVATLKLP 445
           LFGGGN+PAFV+ +++A   G++A + LP
Sbjct: 444 LFGGGNLPAFVVGAVAAFVSGLLALILLP 472

This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot. Length = 477

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 453
TIGR01301477 GPH_sucrose GPH family sucrose/H+ symporter. This 100.0
KOG0637498 consensus Sucrose transporter and related proteins 100.0
KOG0569485 consensus Permease of the major facilitator superf 99.94
KOG0254513 consensus Predicted transporter (major facilitator 99.89
PF00083451 Sugar_tr: Sugar (and other) transporter; InterPro: 99.87
TIGR00887502 2A0109 phosphate:H+ symporter. This model represen 99.85
PF13347428 MFS_2: MFS/sugar transport protein 99.84
TIGR00792437 gph sugar (Glycoside-Pentoside-Hexuronide) transpo 99.78
PRK10077479 xylE D-xylose transporter XylE; Provisional 99.78
TIGR01299742 synapt_SV2 synaptic vesicle protein SV2. This mode 99.77
TIGR00879481 SP MFS transporter, sugar porter (SP) family. This 99.75
TIGR00898505 2A0119 cation transport protein. 99.75
PRK10429473 melibiose:sodium symporter; Provisional 99.71
PRK11551406 putative 3-hydroxyphenylpropionic transporter MhpT 99.7
TIGR00893399 2A0114 d-galactonate transporter. 99.68
PRK10642490 proline/glycine betaine transporter; Provisional 99.68
COG2211467 MelB Na+/melibiose symporter and related transport 99.67
PRK09669444 putative symporter YagG; Provisional 99.64
PRK09952438 shikimate transporter; Provisional 99.63
PRK10489417 enterobactin exporter EntS; Provisional 99.63
PRK10406432 alpha-ketoglutarate transporter; Provisional 99.63
PRK11462460 putative transporter; Provisional 99.62
PF11700477 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0 99.61
TIGR00899375 2A0120 sugar efflux transporter. This family of pr 99.6
PRK11663434 regulatory protein UhpC; Provisional 99.59
TIGR00712438 glpT glycerol-3-phosphate transporter. This model 99.57
PRK11010491 ampG muropeptide transporter; Validated 99.57
PRK09874408 drug efflux system protein MdtG; Provisional 99.56
TIGR00901356 2A0125 AmpG-related permease. 99.56
TIGR00900365 2A0121 H+ Antiporter protein. 99.55
PRK03545390 putative arabinose transporter; Provisional 99.55
PRK11273452 glpT sn-glycerol-3-phosphate transporter; Provisio 99.54
TIGR00710385 efflux_Bcr_CflA drug resistance transporter, Bcr/C 99.53
TIGR00883394 2A0106 metabolite-proton symporter. This model rep 99.53
TIGR00890377 2A0111 Oxalate/Formate Antiporter. 99.53
cd06174352 MFS The Major Facilitator Superfamily (MFS) is a l 99.52
TIGR00891405 2A0112 putative sialic acid transporter. 99.51
PRK09848448 glucuronide transporter; Provisional 99.5
TIGR00881379 2A0104 phosphoglycerate transporter family protein 99.49
TIGR02332412 HpaX 4-hydroxyphenylacetate permease. This protein 99.48
PRK11102377 bicyclomycin/multidrug efflux system; Provisional 99.47
COG2814394 AraJ Arabinose efflux permease [Carbohydrate trans 99.47
PRK09705393 cynX putative cyanate transporter; Provisional 99.47
PRK08633 1146 2-acyl-glycerophospho-ethanolamine acyltransferase 99.47
PRK15075434 citrate-proton symporter; Provisional 99.46
PRK15011393 sugar efflux transporter B; Provisional 99.46
PRK12382392 putative transporter; Provisional 99.46
PRK11646400 multidrug resistance protein MdtH; Provisional 99.46
TIGR00897402 2A0118 polyol permease family. This family of prot 99.46
PRK10473392 multidrug efflux system protein MdtL; Provisional 99.46
PRK11902402 ampG muropeptide transporter; Reviewed 99.45
PRK05122399 major facilitator superfamily transporter; Provisi 99.45
PRK12307426 putative sialic acid transporter; Provisional 99.45
KOG0253528 consensus Synaptic vesicle transporter SV2 (major 99.45
PRK09556467 uhpT sugar phosphate antiporter; Reviewed 99.45
TIGR00903368 2A0129 major facilitator 4 family protein. This fa 99.42
TIGR00895398 2A0115 benzoate transport. 99.41
PRK10213394 nepI ribonucleoside transporter; Reviewed 99.41
PRK10091382 MFS transport protein AraJ; Provisional 99.39
PRK11195393 lysophospholipid transporter LplT; Provisional 99.39
PRK06814 1140 acylglycerophosphoethanolamine acyltransferase; Pr 99.38
PRK10054395 putative transporter; Provisional 99.38
TIGR00894465 2A0114euk Na(+)-dependent inorganic phosphate cotr 99.37
PF07690352 MFS_1: Major Facilitator Superfamily; InterPro: IP 99.37
PRK10504471 putative transporter; Provisional 99.34
PRK09528420 lacY galactoside permease; Reviewed 99.33
PRK15402406 multidrug efflux system translocase MdfA; Provisio 99.33
TIGR00892455 2A0113 monocarboxylate transporter 1. 99.33
TIGR00902382 2A0127 phenyl proprionate permease family protein. 99.32
TIGR00711485 efflux_EmrB drug resistance transporter, EmrB/QacA 99.31
PRK14995495 methyl viologen resistance protein SmvA; Provision 99.29
PRK03893496 putative sialic acid transporter; Provisional 99.29
PF05977 524 MFS_3: Transmembrane secretion effector; InterPro: 99.29
PRK11128382 putative 3-phenylpropionic acid transporter; Provi 99.29
TIGR00882396 2A0105 oligosaccharide:H+ symporter. 99.28
TIGR02718390 sider_RhtX_FptX siderophore transporter, RhtX/FptX 99.27
KOG0255521 consensus Synaptic vesicle transporter SVOP and re 99.27
PLN00028476 nitrate transmembrane transporter; Provisional 99.26
PRK03699394 putative transporter; Provisional 99.26
TIGR00886366 2A0108 nitrite extrusion protein (nitrite facilita 99.23
TIGR00889418 2A0110 nucleoside transporter. This family of prot 99.22
PRK11043401 putative transporter; Provisional 99.22
KOG0252538 consensus Inorganic phosphate transporter [Inorgan 99.2
TIGR01272310 gluP glucose/galactose transporter. Disruption of 99.14
PRK10133438 L-fucose transporter; Provisional 99.13
TIGR00896355 CynX cyanate transporter. This family of proteins 99.12
COG2270438 Permeases of the major facilitator superfamily [Ge 99.12
PRK15403413 multidrug efflux system protein MdtM; Provisional 99.1
PRK03633381 putative MFS family transporter protein; Provision 99.1
PRK11652394 emrD multidrug resistance protein D; Provisional 99.09
PRK10054 395 putative transporter; Provisional 98.98
KOG2532466 consensus Permease of the major facilitator superf 98.98
COG2271448 UhpC Sugar phosphate permease [Carbohydrate transp 98.97
PRK15034462 nitrate/nitrite transport protein NarU; Provisiona 98.95
PRK11646 400 multidrug resistance protein MdtH; Provisional 98.92
PF03209403 PUCC: PUCC protein; InterPro: IPR004896 This prote 98.91
TIGR00880141 2_A_01_02 Multidrug resistance protein. 98.89
PRK10207 489 dipeptide/tripeptide permease B; Provisional 98.87
PRK15403 413 multidrug efflux system protein MdtM; Provisional 98.86
TIGR00710 385 efflux_Bcr_CflA drug resistance transporter, Bcr/C 98.8
TIGR00788468 fbt folate/biopterin transporter. The only functio 98.79
PRK10091 382 MFS transport protein AraJ; Provisional 98.79
PF07690 352 MFS_1: Major Facilitator Superfamily; InterPro: IP 98.79
TIGR00900 365 2A0121 H+ Antiporter protein. 98.77
TIGR00895 398 2A0115 benzoate transport. 98.76
TIGR00885410 fucP L-fucose:H+ symporter permease. This family d 98.75
PRK09584 500 tppB putative tripeptide transporter permease; Rev 98.75
TIGR00924 475 yjdL_sub1_fam amino acid/peptide transporter (Pept 98.75
TIGR00711 485 efflux_EmrB drug resistance transporter, EmrB/QacA 98.75
PRK10473 392 multidrug efflux system protein MdtL; Provisional 98.73
PRK10504 471 putative transporter; Provisional 98.73
TIGR00891 405 2A0112 putative sialic acid transporter. 98.72
PRK11663 434 regulatory protein UhpC; Provisional 98.7
PRK11195 393 lysophospholipid transporter LplT; Provisional 98.7
COG2223417 NarK Nitrate/nitrite transporter [Inorganic ion tr 98.69
PRK03545 390 putative arabinose transporter; Provisional 98.69
TIGR02332 412 HpaX 4-hydroxyphenylacetate permease. This protein 98.68
PF01306412 LacY_symp: LacY proton/sugar symporter; InterPro: 98.68
TIGR00881 379 2A0104 phosphoglycerate transporter family protein 98.67
PRK15462 493 dipeptide/tripeptide permease D; Provisional 98.66
PRK10213 394 nepI ribonucleoside transporter; Reviewed 98.65
PRK15402 406 multidrug efflux system translocase MdfA; Provisio 98.65
TIGR00893 399 2A0114 d-galactonate transporter. 98.64
PRK05122 399 major facilitator superfamily transporter; Provisi 98.63
PRK11551 406 putative 3-hydroxyphenylpropionic transporter MhpT 98.63
PRK14995 495 methyl viologen resistance protein SmvA; Provision 98.63
KOG2504509 consensus Monocarboxylate transporter [Carbohydrat 98.63
KOG2615451 consensus Permease of the major facilitator superf 98.63
PRK09874 408 drug efflux system protein MdtG; Provisional 98.62
PRK10207489 dipeptide/tripeptide permease B; Provisional 98.62
KOG1330493 consensus Sugar transporter/spinster transmembrane 98.61
TIGR00897 402 2A0118 polyol permease family. This family of prot 98.58
TIGR00924475 yjdL_sub1_fam amino acid/peptide transporter (Pept 98.58
cd06174 352 MFS The Major Facilitator Superfamily (MFS) is a l 98.58
TIGR00899 375 2A0120 sugar efflux transporter. This family of pr 98.57
TIGR00903 368 2A0129 major facilitator 4 family protein. This fa 98.56
PRK10489 417 enterobactin exporter EntS; Provisional 98.55
TIGR01299 742 synapt_SV2 synaptic vesicle protein SV2. This mode 98.53
PRK11102 377 bicyclomycin/multidrug efflux system; Provisional 98.52
PRK11652 394 emrD multidrug resistance protein D; Provisional 98.52
PRK10642 490 proline/glycine betaine transporter; Provisional 98.51
PRK10077 479 xylE D-xylose transporter XylE; Provisional 98.51
PRK12307 426 putative sialic acid transporter; Provisional 98.49
TIGR00712 438 glpT glycerol-3-phosphate transporter. This model 98.49
TIGR00886 366 2A0108 nitrite extrusion protein (nitrite facilita 98.49
PRK03633 381 putative MFS family transporter protein; Provision 98.48
PRK12382 392 putative transporter; Provisional 98.48
PRK11043 401 putative transporter; Provisional 98.47
TIGR00879 481 SP MFS transporter, sugar porter (SP) family. This 98.47
TIGR00898 505 2A0119 cation transport protein. 98.46
TIGR00890 377 2A0111 Oxalate/Formate Antiporter. 98.45
PRK08633 1146 2-acyl-glycerophospho-ethanolamine acyltransferase 98.45
TIGR00882 396 2A0105 oligosaccharide:H+ symporter. 98.44
PRK09952 438 shikimate transporter; Provisional 98.42
PF03825400 Nuc_H_symport: Nucleoside H+ symporter 98.42
PRK10406 432 alpha-ketoglutarate transporter; Provisional 98.42
KOG3764 464 consensus Vesicular amine transporter [Intracellul 98.41
PRK03893 496 putative sialic acid transporter; Provisional 98.41
PRK09556 467 uhpT sugar phosphate antiporter; Reviewed 98.39
PRK09528 420 lacY galactoside permease; Reviewed 98.39
PLN00028 476 nitrate transmembrane transporter; Provisional 98.39
TIGR00887 502 2A0109 phosphate:H+ symporter. This model represen 98.38
TIGR01301 477 GPH_sucrose GPH family sucrose/H+ symporter. This 98.37
PRK11273 452 glpT sn-glycerol-3-phosphate transporter; Provisio 98.36
PRK03699 394 putative transporter; Provisional 98.35
PRK09705 393 cynX putative cyanate transporter; Provisional 98.34
PRK15011 393 sugar efflux transporter B; Provisional 98.34
TIGR00805633 oat sodium-independent organic anion transporter. 98.33
PF05977 524 MFS_3: Transmembrane secretion effector; InterPro: 98.31
TIGR00892 455 2A0113 monocarboxylate transporter 1. 98.31
TIGR00883 394 2A0106 metabolite-proton symporter. This model rep 98.3
PRK06814 1140 acylglycerophosphoethanolamine acyltransferase; Pr 98.29
KOG1330 493 consensus Sugar transporter/spinster transmembrane 98.26
PRK09584500 tppB putative tripeptide transporter permease; Rev 98.2
KOG2533495 consensus Permease of the major facilitator superf 98.2
KOG2615 451 consensus Permease of the major facilitator superf 98.18
COG2814 394 AraJ Arabinose efflux permease [Carbohydrate trans 98.16
PRK15075 434 citrate-proton symporter; Provisional 98.12
TIGR00901 356 2A0125 AmpG-related permease. 98.12
TIGR00896 355 CynX cyanate transporter. This family of proteins 98.1
TIGR00894 465 2A0114euk Na(+)-dependent inorganic phosphate cotr 98.1
COG2271 448 UhpC Sugar phosphate permease [Carbohydrate transp 98.09
PRK15034 462 nitrate/nitrite transport protein NarU; Provisiona 98.02
TIGR00885 410 fucP L-fucose:H+ symporter permease. This family d 98.0
KOG0255 521 consensus Synaptic vesicle transporter SVOP and re 97.99
PRK11010 491 ampG muropeptide transporter; Validated 97.96
PF06609599 TRI12: Fungal trichothecene efflux pump (TRI12); I 97.95
PRK10133 438 L-fucose transporter; Provisional 97.9
KOG0254 513 consensus Predicted transporter (major facilitator 97.84
COG3104 498 PTR2 Dipeptide/tripeptide permease [Amino acid tra 97.84
KOG2816463 consensus Predicted transporter ADD1 (major facili 97.83
TIGR00792 437 gph sugar (Glycoside-Pentoside-Hexuronide) transpo 97.77
PRK11902 402 ampG muropeptide transporter; Reviewed 97.76
PTZ00207 591 hypothetical protein; Provisional 97.69
PF03092433 BT1: BT1 family; InterPro: IPR004324 Members of th 97.64
TIGR00889 418 2A0110 nucleoside transporter. This family of prot 97.61
KOG4686459 consensus Predicted sugar transporter [Carbohydrat 97.57
COG0738422 FucP Fucose permease [Carbohydrate transport and m 97.57
TIGR00806 511 rfc RFC reduced folate carrier. Proteins of the RF 97.57
PF06609 599 TRI12: Fungal trichothecene efflux pump (TRI12); I 97.55
COG2807395 CynX Cyanate permease [Inorganic ion transport and 97.53
PF13347 428 MFS_2: MFS/sugar transport protein 97.51
KOG3764464 consensus Vesicular amine transporter [Intracellul 97.5
KOG2325488 consensus Predicted transporter/transmembrane prot 97.46
TIGR00805 633 oat sodium-independent organic anion transporter. 97.43
KOG0569 485 consensus Permease of the major facilitator superf 97.4
PF00083 451 Sugar_tr: Sugar (and other) transporter; InterPro: 97.38
KOG2816 463 consensus Predicted transporter ADD1 (major facili 97.35
KOG2563480 consensus Permease of the major facilitator superf 97.35
PRK11128 382 putative 3-phenylpropionic acid transporter; Provi 97.32
TIGR00806511 rfc RFC reduced folate carrier. Proteins of the RF 97.29
COG2223 417 NarK Nitrate/nitrite transporter [Inorganic ion tr 97.23
TIGR00902 382 2A0127 phenyl proprionate permease family protein. 97.22
KOG3626735 consensus Organic anion transporter [Secondary met 97.2
PTZ00207591 hypothetical protein; Provisional 97.2
PRK11462 460 putative transporter; Provisional 97.03
TIGR02718 390 sider_RhtX_FptX siderophore transporter, RhtX/FptX 96.99
PRK09669 444 putative symporter YagG; Provisional 96.99
PRK10429 473 melibiose:sodium symporter; Provisional 96.96
KOG2533 495 consensus Permease of the major facilitator superf 96.88
TIGR00880141 2_A_01_02 Multidrug resistance protein. 96.85
KOG2504 509 consensus Monocarboxylate transporter [Carbohydrat 96.77
PRK15462493 dipeptide/tripeptide permease D; Provisional 96.75
COG2211 467 MelB Na+/melibiose symporter and related transport 96.73
KOG2532 466 consensus Permease of the major facilitator superf 96.66
PF03825 400 Nuc_H_symport: Nucleoside H+ symporter 96.22
PF05631 354 DUF791: Protein of unknown function (DUF791); Inte 96.17
PF01770412 Folate_carrier: Reduced folate carrier; InterPro: 96.17
PF03137539 OATP: Organic Anion Transporter Polypeptide (OATP) 96.12
PF05978156 UNC-93: Ion channel regulatory protein UNC-93; Int 96.11
PF01306 412 LacY_symp: LacY proton/sugar symporter; InterPro: 95.98
PRK09848 448 glucuronide transporter; Provisional 95.97
KOG0252 538 consensus Inorganic phosphate transporter [Inorgan 95.94
TIGR00788 468 fbt folate/biopterin transporter. The only functio 95.9
COG0738 422 FucP Fucose permease [Carbohydrate transport and m 95.86
COG2807 395 CynX Cyanate permease [Inorganic ion transport and 95.72
KOG2563 480 consensus Permease of the major facilitator superf 95.52
PF03209 403 PUCC: PUCC protein; InterPro: IPR004896 This prote 94.64
PF13000544 Acatn: Acetyl-coenzyme A transporter 1; InterPro: 94.46
PF11700 477 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0 93.41
PF03092 433 BT1: BT1 family; InterPro: IPR004324 Members of th 93.2
PF06813250 Nodulin-like: Nodulin-like; InterPro: IPR010658 Th 91.58
COG0477 338 ProP Permeases of the major facilitator superfamil 90.86
KOG3810433 consensus Micronutrient transporters (folate trans 90.27
KOG0253 528 consensus Synaptic vesicle transporter SV2 (major 89.94
KOG2325 488 consensus Predicted transporter/transmembrane prot 89.62
TIGR00939 437 2a57 Equilibrative Nucleoside Transporter (ENT). 89.31
PF1283277 MFS_1_like: MFS_1 like family 88.47
TIGR00926 654 2A1704 Peptide:H+ symporter (also transports b-lac 86.63
COG2270 438 Permeases of the major facilitator superfamily [Ge 85.46
PF02487402 CLN3: CLN3 protein; InterPro: IPR003492 Batten's d 85.14
KOG3762618 consensus Predicted transporter [General function 82.02
PF06963432 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi 81.21
KOG3574510 consensus Acetyl-CoA transporter [Inorganic ion tr 80.03
TIGR00769472 AAA ADP/ATP carrier protein family. These proteins 80.01
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter Back     alignment and domain information 
Probab=100.00  E-value=9.3e-59  Score=481.91  Aligned_cols=388  Identities=46%  Similarity=0.885  Sum_probs=324.2

Q ss_pred             eeehhhhhchhhHHhhhcCCcccccccCCCceeehhHHHHHHHHHhhcccccchhhHHHHhcCCCccch--hhHHHHHHH
Q 012918            3 SVAVIIIGFSADIGYILGDTKEHCSKFRGTRTRAAFVFVIGFWLLDLANNTVQGPARALLADLSGPDQR--NSANAIFCS   80 (453)
Q Consensus         3 ~i~ll~l~~~~~ig~~l~d~~~~~~~~~~~~~~~i~~~v~g~~lld~a~n~~~~p~rA~i~D~~p~~qr--~~a~~~~~~   80 (453)
                      ++++++++++++++..++|+.+     +..+++.++.++++++++|++.|.+|.|.||+++|.+|++||  +.+++++++
T Consensus        85 ~~~l~ll~~~~~~~~~~~~~~~-----~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~  159 (477)
T TIGR01301        85 AFAVILIGFAADIGHLFGDNLD-----KKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSF  159 (477)
T ss_pred             HHHHHHHHhCchhhhhcccccc-----ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHH
Confidence            3567888899988888877532     345577788889999999999999999999999999999876  589999999


Q ss_pred             HHHhhhhHhhccccccccccccccccchhhhcccchhhHHHHHHHHHHHHHhhheeeEeecccCCCCCCCCCCCCCCCCC
Q 012918           81 WMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLD  160 (453)
Q Consensus        81 ~~~lG~ilgy~ig~~~~~~~~~~~~~~~~~~~~~~~~r~~f~i~~i~~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~  160 (453)
                      +.++|+++||.+|++++|.+.+++..++.++..+.++|.+|.++++.++++++++++++||+|...++..+++|      
T Consensus       160 ~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~~------  233 (477)
T TIGR01301       160 FMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINSE------  233 (477)
T ss_pred             HHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhhh------
Confidence            99999999999999865677777766666677788999999999999999999999999998864322110000      


Q ss_pred             CcccccccccCCCCCCCCCCCCCCcccCcccchhhhhccccccccCCCCCCCchhhHHHHHHHhccCCHHHHHHHHHHHH
Q 012918          161 DPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMAL  240 (453)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~l~~l~~~~f~  240 (453)
                                                        .+   +.+       +.+....++++++++++|||++|++|++|||
T Consensus       234 ----------------------------------~~---~~~-------~~~~~~~~~~i~~~~~~mP~~m~~l~~vqff  269 (477)
T TIGR01301       234 ----------------------------------AA---PPS-------KHGEEAFFGELFGAFKYLPRPVWILLLVTCL  269 (477)
T ss_pred             ----------------------------------cc---ccc-------ccchhhhHHHHHHHHHHCCHHHHHHHHHHHH
Confidence                                              00   000       0112346889999999999999999999999


Q ss_pred             HHHhhhhhhhcccccceeeeecCCCCCCChhhhhHHhhhhHHHHHHHHHHHHHHHHhhhHHHhhhhcC-cchhhHHHHHH
Q 012918          241 TWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG-SRLVWAISNFI  319 (453)
Q Consensus       241 ~w~g~~~~~~y~t~~vg~~if~g~p~~~~~~~~~y~~gv~~g~~~l~~~s~~~~i~s~~~~~l~d~~g-rr~l~~~g~~~  319 (453)
                      +|+||+++++|.|||||+++|+++|.+    .+.|++|+|+|+|+++++++++.++|++++++++|+| ||++|.+|+++
T Consensus       270 sW~a~f~~~~y~T~~vg~~v~~~~~~~----~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~  345 (477)
T TIGR01301       270 NWIAWFPFILFDTDWMGREVYGGSVNQ----GAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNII  345 (477)
T ss_pred             HHHHHHHHHHhccHHHHHHHcCCCCcc----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHH
Confidence            999999999999999999999997643    3589999999999999999999999999999999998 58999999999


Q ss_pred             HHHHHHHHHHHhhhhhcc-ccCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhcccccCCCCCcceeehhhHH
Q 012918          320 VFACMATTAIISVISVRE-YSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNL  398 (453)
Q Consensus       320 ~~i~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~r~~G~~~gi~n~  398 (453)
                      .++|++.+.+++....|. ..+.....++++...++.+++++++.|++|++++|+||+++++++|++.|++|+|||++|+
T Consensus       346 ~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~  425 (477)
T TIGR01301       346 LAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNL  425 (477)
T ss_pred             HHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHH
Confidence            999999988877432110 0000001112233346888999999999999999999999999999877899999999999


Q ss_pred             HHHHHHHHHhhccccceecccccchhhHhHHHHHHHHHHHHhheeccCCCC
Q 012918          399 AIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLSS  449 (453)
Q Consensus       399 ~~~l~q~i~s~~~g~l~~~~g~~~~~~f~~~a~~~liaa~~v~~~vpet~g  449 (453)
                      ++++||+++++..|++.+.+|+++.++|.++|++++++++++.+.+|+++.
T Consensus       426 ~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~~~  476 (477)
T TIGR01301       426 AIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPRPRV  476 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence            999999999999999889999888889999999999999999999999875

This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters Back     alignment and domain information
>TIGR00887 2A0109 phosphate:H+ symporter Back     alignment and domain information
>PF13347 MFS_2: MFS/sugar transport protein Back     alignment and domain information
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter Back     alignment and domain information
>PRK10077 xylE D-xylose transporter XylE; Provisional Back     alignment and domain information
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2 Back     alignment and domain information
>TIGR00879 SP MFS transporter, sugar porter (SP) family Back     alignment and domain information
>TIGR00898 2A0119 cation transport protein Back     alignment and domain information
>PRK10429 melibiose:sodium symporter; Provisional Back     alignment and domain information
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional Back     alignment and domain information
>TIGR00893 2A0114 d-galactonate transporter Back     alignment and domain information
>PRK10642 proline/glycine betaine transporter; Provisional Back     alignment and domain information
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09669 putative symporter YagG; Provisional Back     alignment and domain information
>PRK09952 shikimate transporter; Provisional Back     alignment and domain information
>PRK10489 enterobactin exporter EntS; Provisional Back     alignment and domain information
>PRK10406 alpha-ketoglutarate transporter; Provisional Back     alignment and domain information
>PRK11462 putative transporter; Provisional Back     alignment and domain information
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions Back     alignment and domain information
>TIGR00899 2A0120 sugar efflux transporter Back     alignment and domain information
>PRK11663 regulatory protein UhpC; Provisional Back     alignment and domain information
>TIGR00712 glpT glycerol-3-phosphate transporter Back     alignment and domain information
>PRK11010 ampG muropeptide transporter; Validated Back     alignment and domain information
>PRK09874 drug efflux system protein MdtG; Provisional Back     alignment and domain information
>TIGR00901 2A0125 AmpG-related permease Back     alignment and domain information
>TIGR00900 2A0121 H+ Antiporter protein Back     alignment and domain information
>PRK03545 putative arabinose transporter; Provisional Back     alignment and domain information
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional Back     alignment and domain information
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily Back     alignment and domain information
>TIGR00883 2A0106 metabolite-proton symporter Back     alignment and domain information
>TIGR00890 2A0111 Oxalate/Formate Antiporter Back     alignment and domain information
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>TIGR00891 2A0112 putative sialic acid transporter Back     alignment and domain information
>PRK09848 glucuronide transporter; Provisional Back     alignment and domain information
>TIGR00881 2A0104 phosphoglycerate transporter family protein Back     alignment and domain information
>TIGR02332 HpaX 4-hydroxyphenylacetate permease Back     alignment and domain information
>PRK11102 bicyclomycin/multidrug efflux system; Provisional Back     alignment and domain information
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09705 cynX putative cyanate transporter; Provisional Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>PRK15075 citrate-proton symporter; Provisional Back     alignment and domain information
>PRK15011 sugar efflux transporter B; Provisional Back     alignment and domain information
>PRK12382 putative transporter; Provisional Back     alignment and domain information
>PRK11646 multidrug resistance protein MdtH; Provisional Back     alignment and domain information
>TIGR00897 2A0118 polyol permease family Back     alignment and domain information
>PRK10473 multidrug efflux system protein MdtL; Provisional Back     alignment and domain information
>PRK11902 ampG muropeptide transporter; Reviewed Back     alignment and domain information
>PRK05122 major facilitator superfamily transporter; Provisional Back     alignment and domain information
>PRK12307 putative sialic acid transporter; Provisional Back     alignment and domain information
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>PRK09556 uhpT sugar phosphate antiporter; Reviewed Back     alignment and domain information
>TIGR00903 2A0129 major facilitator 4 family protein Back     alignment and domain information
>TIGR00895 2A0115 benzoate transport Back     alignment and domain information
>PRK10213 nepI ribonucleoside transporter; Reviewed Back     alignment and domain information
>PRK10091 MFS transport protein AraJ; Provisional Back     alignment and domain information
>PRK11195 lysophospholipid transporter LplT; Provisional Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>PRK10054 putative transporter; Provisional Back     alignment and domain information
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter Back     alignment and domain information
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms Back     alignment and domain information
>PRK10504 putative transporter; Provisional Back     alignment and domain information
>PRK09528 lacY galactoside permease; Reviewed Back     alignment and domain information
>PRK15402 multidrug efflux system translocase MdfA; Provisional Back     alignment and domain information
>TIGR00892 2A0113 monocarboxylate transporter 1 Back     alignment and domain information
>TIGR00902 2A0127 phenyl proprionate permease family protein Back     alignment and domain information
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily Back     alignment and domain information
>PRK14995 methyl viologen resistance protein SmvA; Provisional Back     alignment and domain information
>PRK03893 putative sialic acid transporter; Provisional Back     alignment and domain information
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily Back     alignment and domain information
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional Back     alignment and domain information
>TIGR00882 2A0105 oligosaccharide:H+ symporter Back     alignment and domain information
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family Back     alignment and domain information
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>PLN00028 nitrate transmembrane transporter; Provisional Back     alignment and domain information
>PRK03699 putative transporter; Provisional Back     alignment and domain information
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator) Back     alignment and domain information
>TIGR00889 2A0110 nucleoside transporter Back     alignment and domain information
>PRK11043 putative transporter; Provisional Back     alignment and domain information
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR01272 gluP glucose/galactose transporter Back     alignment and domain information
>PRK10133 L-fucose transporter; Provisional Back     alignment and domain information
>TIGR00896 CynX cyanate transporter Back     alignment and domain information
>COG2270 Permeases of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>PRK15403 multidrug efflux system protein MdtM; Provisional Back     alignment and domain information
>PRK03633 putative MFS family transporter protein; Provisional Back     alignment and domain information
>PRK11652 emrD multidrug resistance protein D; Provisional Back     alignment and domain information
>PRK10054 putative transporter; Provisional Back     alignment and domain information
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK15034 nitrate/nitrite transport protein NarU; Provisional Back     alignment and domain information
>PRK11646 multidrug resistance protein MdtH; Provisional Back     alignment and domain information
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon Back     alignment and domain information
>TIGR00880 2_A_01_02 Multidrug resistance protein Back     alignment and domain information
>PRK10207 dipeptide/tripeptide permease B; Provisional Back     alignment and domain information
>PRK15403 multidrug efflux system protein MdtM; Provisional Back     alignment and domain information
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily Back     alignment and domain information
>TIGR00788 fbt folate/biopterin transporter Back     alignment and domain information
>PRK10091 MFS transport protein AraJ; Provisional Back     alignment and domain information
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms Back     alignment and domain information
>TIGR00900 2A0121 H+ Antiporter protein Back     alignment and domain information
>TIGR00895 2A0115 benzoate transport Back     alignment and domain information
>TIGR00885 fucP L-fucose:H+ symporter permease Back     alignment and domain information
>PRK09584 tppB putative tripeptide transporter permease; Reviewed Back     alignment and domain information
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial Back     alignment and domain information
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily Back     alignment and domain information
>PRK10473 multidrug efflux system protein MdtL; Provisional Back     alignment and domain information
>PRK10504 putative transporter; Provisional Back     alignment and domain information
>TIGR00891 2A0112 putative sialic acid transporter Back     alignment and domain information
>PRK11663 regulatory protein UhpC; Provisional Back     alignment and domain information
>PRK11195 lysophospholipid transporter LplT; Provisional Back     alignment and domain information
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK03545 putative arabinose transporter; Provisional Back     alignment and domain information
>TIGR02332 HpaX 4-hydroxyphenylacetate permease Back     alignment and domain information
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) [] Back     alignment and domain information
>TIGR00881 2A0104 phosphoglycerate transporter family protein Back     alignment and domain information
>PRK15462 dipeptide/tripeptide permease D; Provisional Back     alignment and domain information
>PRK10213 nepI ribonucleoside transporter; Reviewed Back     alignment and domain information
>PRK15402 multidrug efflux system translocase MdfA; Provisional Back     alignment and domain information
>TIGR00893 2A0114 d-galactonate transporter Back     alignment and domain information
>PRK05122 major facilitator superfamily transporter; Provisional Back     alignment and domain information
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional Back     alignment and domain information
>PRK14995 methyl viologen resistance protein SmvA; Provisional Back     alignment and domain information
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>PRK09874 drug efflux system protein MdtG; Provisional Back     alignment and domain information
>PRK10207 dipeptide/tripeptide permease B; Provisional Back     alignment and domain information
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00897 2A0118 polyol permease family Back     alignment and domain information
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial Back     alignment and domain information
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>TIGR00899 2A0120 sugar efflux transporter Back     alignment and domain information
>TIGR00903 2A0129 major facilitator 4 family protein Back     alignment and domain information
>PRK10489 enterobactin exporter EntS; Provisional Back     alignment and domain information
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2 Back     alignment and domain information
>PRK11102 bicyclomycin/multidrug efflux system; Provisional Back     alignment and domain information
>PRK11652 emrD multidrug resistance protein D; Provisional Back     alignment and domain information
>PRK10642 proline/glycine betaine transporter; Provisional Back     alignment and domain information
>PRK10077 xylE D-xylose transporter XylE; Provisional Back     alignment and domain information
>PRK12307 putative sialic acid transporter; Provisional Back     alignment and domain information
>TIGR00712 glpT glycerol-3-phosphate transporter Back     alignment and domain information
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator) Back     alignment and domain information
>PRK03633 putative MFS family transporter protein; Provisional Back     alignment and domain information
>PRK12382 putative transporter; Provisional Back     alignment and domain information
>PRK11043 putative transporter; Provisional Back     alignment and domain information
>TIGR00879 SP MFS transporter, sugar porter (SP) family Back     alignment and domain information
>TIGR00898 2A0119 cation transport protein Back     alignment and domain information
>TIGR00890 2A0111 Oxalate/Formate Antiporter Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>TIGR00882 2A0105 oligosaccharide:H+ symporter Back     alignment and domain information
>PRK09952 shikimate transporter; Provisional Back     alignment and domain information
>PF03825 Nuc_H_symport: Nucleoside H+ symporter Back     alignment and domain information
>PRK10406 alpha-ketoglutarate transporter; Provisional Back     alignment and domain information
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PRK03893 putative sialic acid transporter; Provisional Back     alignment and domain information
>PRK09556 uhpT sugar phosphate antiporter; Reviewed Back     alignment and domain information
>PRK09528 lacY galactoside permease; Reviewed Back     alignment and domain information
>PLN00028 nitrate transmembrane transporter; Provisional Back     alignment and domain information
>TIGR00887 2A0109 phosphate:H+ symporter Back     alignment and domain information
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter Back     alignment and domain information
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional Back     alignment and domain information
>PRK03699 putative transporter; Provisional Back     alignment and domain information
>PRK09705 cynX putative cyanate transporter; Provisional Back     alignment and domain information
>PRK15011 sugar efflux transporter B; Provisional Back     alignment and domain information
>TIGR00805 oat sodium-independent organic anion transporter Back     alignment and domain information
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily Back     alignment and domain information
>TIGR00892 2A0113 monocarboxylate transporter 1 Back     alignment and domain information
>TIGR00883 2A0106 metabolite-proton symporter Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09584 tppB putative tripeptide transporter permease; Reviewed Back     alignment and domain information
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK15075 citrate-proton symporter; Provisional Back     alignment and domain information
>TIGR00901 2A0125 AmpG-related permease Back     alignment and domain information
>TIGR00896 CynX cyanate transporter Back     alignment and domain information
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter Back     alignment and domain information
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK15034 nitrate/nitrite transport protein NarU; Provisional Back     alignment and domain information
>TIGR00885 fucP L-fucose:H+ symporter permease Back     alignment and domain information
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>PRK11010 ampG muropeptide transporter; Validated Back     alignment and domain information
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins Back     alignment and domain information
>PRK10133 L-fucose transporter; Provisional Back     alignment and domain information
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism] Back     alignment and domain information
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter Back     alignment and domain information
>PRK11902 ampG muropeptide transporter; Reviewed Back     alignment and domain information
>PTZ00207 hypothetical protein; Provisional Back     alignment and domain information
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins Back     alignment and domain information
>TIGR00889 2A0110 nucleoside transporter Back     alignment and domain information
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00806 rfc RFC reduced folate carrier Back     alignment and domain information
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins Back     alignment and domain information
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF13347 MFS_2: MFS/sugar transport protein Back     alignment and domain information
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only] Back     alignment and domain information
>TIGR00805 oat sodium-independent organic anion transporter Back     alignment and domain information
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters Back     alignment and domain information
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional Back     alignment and domain information
>TIGR00806 rfc RFC reduced folate carrier Back     alignment and domain information
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00902 2A0127 phenyl proprionate permease family protein Back     alignment and domain information
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PTZ00207 hypothetical protein; Provisional Back     alignment and domain information
>PRK11462 putative transporter; Provisional Back     alignment and domain information
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family Back     alignment and domain information
>PRK09669 putative symporter YagG; Provisional Back     alignment and domain information
>PRK10429 melibiose:sodium symporter; Provisional Back     alignment and domain information
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00880 2_A_01_02 Multidrug resistance protein Back     alignment and domain information
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK15462 dipeptide/tripeptide permease D; Provisional Back     alignment and domain information
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF03825 Nuc_H_symport: Nucleoside H+ symporter Back     alignment and domain information
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function Back     alignment and domain information
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX) Back     alignment and domain information
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs) Back     alignment and domain information
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans Back     alignment and domain information
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) [] Back     alignment and domain information
>PRK09848 glucuronide transporter; Provisional Back     alignment and domain information
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00788 fbt folate/biopterin transporter Back     alignment and domain information
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon Back     alignment and domain information
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ] Back     alignment and domain information
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions Back     alignment and domain information
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins Back     alignment and domain information
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins Back     alignment and domain information
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only] Back     alignment and domain information
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism] Back     alignment and domain information
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only] Back     alignment and domain information
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT) Back     alignment and domain information
>PF12832 MFS_1_like: MFS_1 like family Back     alignment and domain information
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors) Back     alignment and domain information
>COG2270 Permeases of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age Back     alignment and domain information
>KOG3762 consensus Predicted transporter [General function prediction only] Back     alignment and domain information
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1 Back     alignment and domain information
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00769 AAA ADP/ATP carrier protein family Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query453
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-06
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 47.2 bits (111), Expect = 9e-06
 Identities = 64/408 (15%), Positives = 116/408 (28%), Gaps = 154/408 (37%)

Query: 144 LTVNQPNHLTDSAPLLD-----DPQRNAISKSKHD-MPAAPNA-------------NGNK 184
           L+V +   + +     D     D  ++ +SK + D +  + +A                +
Sbjct: 22  LSVFEDAFVDN----FDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEE 77

Query: 185 -----VESGHESDAN--LKHISKKAEDT-----------NGSFNDG----PGAV-----L 217
                VE     +    +  I  +               +  +ND        V      
Sbjct: 78  MVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPY 137

Query: 218 VNLLTSLRHLPPAMHVVLIVMA---LTWL-----------SWFPFFLFDTDWM--GRE-- 259
           + L  +L  L PA +V++  +     TW+               F +F   W+       
Sbjct: 138 LKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIF---WLNLKNCNS 194

Query: 260 -----------VYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIE---PMCR 305
                      +Y  DP  N      +   ++     L ++S+   +   L       C 
Sbjct: 195 PETVLEMLQKLLYQIDP--NWTSRSDHSSNIK-----LRIHSIQAELRRLLKSKPYENCL 247

Query: 306 WIGSRL--VW---AISNFIVFAC--MATTAIISV-----------ISVREYSGGIEHGIG 347
            +   L  V    A + F   +C  + TT    V           IS+  +S  +     
Sbjct: 248 LV---LLNVQNAKAWNAF-NLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEV 303

Query: 348 ANQAIKVASLVVFTL-----LGFPLAITYSVPFAITAELTADSGGGQGLA-------IGV 395
            +  +K        L        P  +      +I AE   D     GLA       +  
Sbjct: 304 KSLLLKYLDCRPQDLPREVLTTNPRRL------SIIAESIRD-----GLATWDNWKHVNC 352

Query: 396 LNLAIVI--------P----QMIVSLGAGPWDALFGGGNIPAFVLASL 431
             L  +I        P    +M   L   P  A     +IP  +L+ +
Sbjct: 353 DKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSA-----HIPTILLSLI 395

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query453
4gc0_A491 D-xylose-proton symporter; MFS, transport protein; 99.9
1pw4_A451 Glycerol-3-phosphate transporter; transmembrane, i 99.72
3o7q_A438 L-fucose-proton symporter; transporter, multi-PASS 99.63
2gfp_A375 EMRD, multidrug resistance protein D; membrane pro 99.54
4aps_A491 DI-OR tripeptide H+ symporter; transport protein, 99.52
2cfq_A417 Lactose permease; transport, transport mechanism, 99.46
2xut_A524 Proton/peptide symporter family protein; transport 99.1
4aps_A 491 DI-OR tripeptide H+ symporter; transport protein, 99.06
2gfp_A 375 EMRD, multidrug resistance protein D; membrane pro 99.03
1pw4_A 451 Glycerol-3-phosphate transporter; transmembrane, i 98.92
2xut_A 524 Proton/peptide symporter family protein; transport 98.82
3o7q_A 438 L-fucose-proton symporter; transporter, multi-PASS 98.79
4gc0_A 491 D-xylose-proton symporter; MFS, transport protein; 98.11
2cfq_A 417 Lactose permease; transport, transport mechanism, 98.02
>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A* Back     alignment and structure
Probab=99.90  E-value=3.7e-25  Score=229.50  Aligned_cols=333  Identities=9%  Similarity=0.004  Sum_probs=212.2

Q ss_pred             HHhhcccccchhhHHHHhcCCCccchhhHHHHHHHHHHhhhhHhhccccccccccccccccchhhhcccchhhHHHHHHH
Q 012918           46 LLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAV  125 (453)
Q Consensus        46 lld~a~n~~~~p~rA~i~D~~p~~qr~~a~~~~~~~~~lG~ilgy~ig~~~~~~~~~~~~~~~~~~~~~~~~r~~f~i~~  125 (453)
                      +..++........++|++|.+|+++|++..++.+....+|.++++.++...  ......     .......||.++.+..
T Consensus       135 l~G~g~G~~~~~~~~~i~E~~p~~~rg~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~-----~~~~~~~~~~~~~~~~  207 (491)
T 4gc0_A          135 IGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFI--ARSGDA-----SWLNTDGWRYMFASEC  207 (491)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTSCGGGHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTSCT-----TTTTTTHHHHHHHTTH
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCHHhhhhhHHhhhhhhhhhhhhhhhcchhh--cccccc-----ccccchhhHHHhhhhh
Confidence            445666677888999999999999999999999999999999998887541  110000     0001247999998888


Q ss_pred             HHHHHHhhheeeEeecccCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCcccCcccchhhhhcccccccc
Q 012918          126 VFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDT  205 (453)
Q Consensus       126 i~~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (453)
                      ++.+ ..++..+..||+|+|...+++.+++++.+        ++.+.                  .+...++..+.++..
T Consensus       208 ~~~~-~~~~~~~~~peSp~~L~~~~~~~~a~~~l--------~~~~~------------------~~~~~~~~~~~~~~~  260 (491)
T 4gc0_A          208 IPAL-LFLMLLYTVPESPRWLMSRGKQEQAEGIL--------RKIMG------------------NTLATQAVQEIKHSL  260 (491)
T ss_dssp             HHHH-HHHHHGGGSCCCHHHHHHTTCHHHHHHHH--------HHHHH------------------HHHHHHHHHHHHHHH
T ss_pred             hhhh-hhhhhhhcCCCChHHHHHcCchhHHHHhH--------HHhcC------------------CchhHHHHHHHHHHH
Confidence            8864 45567888999999987766543332221        11110                  000000000000000


Q ss_pred             CCCCCCCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhcccccceeeeecCCCCCCChhhhhHHhhhhHHHHH
Q 012918          206 NGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFG  285 (453)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~P~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~if~g~p~~~~~~~~~y~~gv~~g~~~  285 (453)
                       +    ..+..  .........++.....+...+.++.+++.+.+|.+....+.  +.+            .  ......
T Consensus       261 -~----~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~------------~--~~~~~~  317 (491)
T 4gc0_A          261 -D----HGRKT--GGRLLMFGVGVIVIGVMLSIFQQFVGINVVLYYAPEVFKTL--GAS------------T--DIALLQ  317 (491)
T ss_dssp             -H----HHHHH--TTHHHHSCCTHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS--SCC------------H--HHHHHH
T ss_pred             -H----hhhhh--hhHHHHhcccHHHHHHHHHHHHHHhhhhHHHhcchHHHHhc--CCC------------c--cchhhH
Confidence             0    00000  00111234455555556666677788888888877654321  111            1  011133


Q ss_pred             HHHHHHHHHHHhhhHHHhhhhcCcchhhHHHHHHHHHHHHHHHHHhhhhhccccCCcccCCCCchhHHHHHHHHHHHhcc
Q 012918          286 LLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGF  365 (453)
Q Consensus       286 l~~~s~~~~i~s~~~~~l~d~~grr~l~~~g~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi  365 (453)
                      ..+.+++..+.+++..+++||+|||+.++.+...++++++..+.......+            ++......++....+++
T Consensus       318 ~~~~~~~~~~~~~~~~~l~dr~Grr~~~~~~~~~~~~~~~~l~~~~~~~~~------------~~~~~~~~~~~~~~~~~  385 (491)
T 4gc0_A          318 TIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAP------------GIVALLSMLFYVAAFAM  385 (491)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHTTCC------------HHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCcchhccchHHHHHHHHHHHHHHhcccc------------hHHHHHHHHHHHHHHHh
Confidence            445667788888999999999999999999988888877665554322100            22223333344455566


Q ss_pred             chhhhccccchhhcccccCCCCCcceeehhhHHHHHHHHHHHhhccccceeccc----ccchhhHhHHHHHHHHHHHHhh
Q 012918          366 PLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFG----GGNIPAFVLASLSALAGGVVAT  441 (453)
Q Consensus       366 ~~a~~~~vP~aLise~~p~~~r~~G~~~gi~n~~~~l~q~i~s~~~g~l~~~~g----~~~~~~f~~~a~~~liaa~~v~  441 (453)
                      ++++.   ++.+.+|.+|.+  -+|+.+|+.+...++++++++.+++.+.+..+    ......|+++++++++++++++
T Consensus       386 ~~~~~---~~~~~~E~fPt~--~R~~~~g~~~~~~~~~~~i~~~~~p~l~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~  460 (491)
T 4gc0_A          386 SWGPV---CWVLLSEIFPNA--IRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMW  460 (491)
T ss_dssp             TTTHH---HHHHHHHSSCTT--THHHHHHHHHHHHHHHHHHHHTHHHHHCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHH---HHHHHHHhCCHh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHH
Confidence            66654   455999999987  45666999999999999999998887654311    1122468899999999999999


Q ss_pred             eeccCCCCCCC
Q 012918          442 LKLPHLSSNSF  452 (453)
Q Consensus       442 ~~vpet~g~~~  452 (453)
                      +++|||||||+
T Consensus       461 ~~~PETkg~tL  471 (491)
T 4gc0_A          461 KFVPETKGKTL  471 (491)
T ss_dssp             HHCCCCTTCCH
T ss_pred             heecCCCCCCH
Confidence            99999999985
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Back     alignment and structure
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* Back     alignment and structure
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} Back     alignment and structure
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} Back     alignment and structure
>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Back     alignment and structure
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} Back     alignment and structure
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} Back     alignment and structure
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} Back     alignment and structure
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Back     alignment and structure
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} Back     alignment and structure
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* Back     alignment and structure
>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A* Back     alignment and structure
>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query453
d1pw4a_447 Glycerol-3-phosphate transporter {Escherichia coli 99.65
d1pv7a_417 Lactose permease {Escherichia coli [TaxId: 562]} 99.4
d1pw4a_ 447 Glycerol-3-phosphate transporter {Escherichia coli 98.71
d1pv7a_ 417 Lactose permease {Escherichia coli [TaxId: 562]} 98.45
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=99.65  E-value=1.3e-16  Score=159.26  Aligned_cols=306  Identities=12%  Similarity=0.077  Sum_probs=188.8

Q ss_pred             HhhcccccchhhHHHHhcCCCccchhhHHHHHHHHHHhhhhHhhccccccccccccccccchhhhcccchhhHHHHHHHH
Q 012918           47 LDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVV  126 (453)
Q Consensus        47 ld~a~n~~~~p~rA~i~D~~p~~qr~~a~~~~~~~~~lG~ilgy~ig~~~~~~~~~~~~~~~~~~~~~~~~r~~f~i~~i  126 (453)
                      ..++......+..+++.|..|+++|+++.++.+....+|..++..++...     ..         ....||+.|.+.++
T Consensus       126 ~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~-----~~---------~~~~w~~~~~~~~~  191 (447)
T d1pw4a_         126 CGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLG-----MA---------WFNDWHAALYMPAF  191 (447)
T ss_dssp             HHHHHHHTHHHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHHH-----HH---------HTCCSTTCTHHHHH
T ss_pred             HHHhhhhhhhHHHHHHHHHHHhhcccccccccccccchhhhhhhhhhhhH-----hh---------hhhcccccchhhhh
Confidence            34444556778899999999999999999999999999998887666431     00         01368888888777


Q ss_pred             HHHHHhhheeeEeecccCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCcccCcccchhhhhccccccccC
Q 012918          127 FLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTN  206 (453)
Q Consensus       127 ~~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (453)
                      +.++..++..+..+|+|........++ .++..                                .+..++  + .    
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--------------------------------~~~~~~--~-~----  231 (447)
T d1pw4a_         192 CAILVALFAFAMMRDTPQSCGLPPIEE-YKNDY--------------------------------PDDYNE--K-A----  231 (447)
T ss_dssp             HHHHHHHHHHHHCCCSSTTTCCCSCTT-TCCC------------------------------------------------
T ss_pred             hHHHHHHHHHHhcccchhhcccchhhh-hhhhc--------------------------------ccchhh--c-c----
Confidence            776666777777888775443222110 00000                                000000  0 0    


Q ss_pred             CCCCCCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhcccccceeeeecCCCCCCChhhhhHHhhhhHHHHHH
Q 012918          207 GSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGL  286 (453)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~P~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~if~g~p~~~~~~~~~y~~gv~~g~~~l  286 (453)
                      +     .....++.........+.++.++...++.+...+.+..|.+.|+.+ .++.+            .  ....+..
T Consensus       232 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~------------~--~~~~~~~  291 (447)
T d1pw4a_         232 E-----QELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKE-VKHFA------------L--DKSSWAY  291 (447)
T ss_dssp             ---------CCTHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHBTT-BSCCC------------H--HHHHHHH
T ss_pred             c-----cccchhhHHHHHHHcCchHHHHHHHhhhhhhhhhcchhhhhhhccc-ccccc------------c--chhhhhh
Confidence            0     0000011111112234566777778888888888888888887654 22222            1  1222445


Q ss_pred             HHHHHHHHHHhhhHHHhhhhcCcchhhHHHHHHHHHHHHHHHHHhhhhhccccCCcccCCCCchhHHHHHHHHHHHhccc
Q 012918          287 LLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFP  366 (453)
Q Consensus       287 ~~~s~~~~i~s~~~~~l~d~~grr~l~~~g~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~  366 (453)
                      ..+.+...+..++.+++.||++||+..........+.............+               ..+..++.....|++
T Consensus       292 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~g~~  356 (447)
T d1pw4a_         292 FLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAG---------------NPTVDMICMIVIGFL  356 (447)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHHTTSCCTT---------------CHHHHHHHHHHHHHH
T ss_pred             hcchhhhhhhhhhhhhhhhhccccccccccchhHHHHHHHHHHHHhcccc---------------cHHHHHHHHHHHHHH
Confidence            56677788889999999999998876555443333322222222111000               133444455556776


Q ss_pred             hhhhccccchhhcccccCCCCCcceeehhhHHHHHH-HHHHHhhccccceecccccchhhHhHHHHHHHHHHHHhheecc
Q 012918          367 LAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVI-PQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLP  445 (453)
Q Consensus       367 ~a~~~~vP~aLise~~p~~~r~~G~~~gi~n~~~~l-~q~i~s~~~g~l~~~~g~~~~~~f~~~a~~~liaa~~v~~~vp  445 (453)
                      .+....+.++++.|..|++  .+|+.+|+.|...++ +.++.+...|.+.+..|..  ..|.+.+++++++.++...+++
T Consensus       357 ~~~~~~~~~~~~~~~~p~~--~~g~~~g~~~~~~~~~g~~~~~~~~g~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~  432 (447)
T d1pw4a_         357 IYGPVMLIGLHALELAPKK--AAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWD--GGFMVMIGGSILAVILLIVVMI  432 (447)
T ss_dssp             HTHHHHHHHHHHHHTSCTT--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSH--HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH--HHHHHHHHHHHHHHHHHHHHHH
Confidence            6666666677899999975  678889999888776 5677788888888888744  4677777777777776655443
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Back     information, alignment and structure