Citrus Sinensis ID: 012947
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 452 | 2.2.26 [Sep-21-2011] | |||||||
| Q8LGI2 | 454 | Probable mitochondrial sa | yes | no | 0.971 | 0.966 | 0.733 | 0.0 | |
| Q8R127 | 429 | Saccharopine dehydrogenas | yes | no | 0.915 | 0.965 | 0.361 | 5e-74 | |
| Q6AY30 | 429 | Saccharopine dehydrogenas | yes | no | 0.915 | 0.965 | 0.352 | 7e-73 | |
| Q8NBX0 | 429 | Saccharopine dehydrogenas | yes | no | 0.915 | 0.965 | 0.368 | 3e-72 | |
| Q5R5C9 | 429 | Saccharopine dehydrogenas | yes | no | 0.915 | 0.965 | 0.361 | 2e-71 | |
| Q3T067 | 429 | Saccharopine dehydrogenas | yes | no | 0.909 | 0.958 | 0.348 | 5e-71 | |
| Q7D745 | 419 | Putative trans-acting eno | yes | no | 0.331 | 0.357 | 0.378 | 5e-25 | |
| O53176 | 419 | Putative trans-acting eno | yes | no | 0.331 | 0.357 | 0.378 | 5e-25 | |
| Q9CD87 | 418 | Trans-acting enoyl reduct | yes | no | 0.431 | 0.466 | 0.328 | 2e-23 | |
| P95139 | 418 | Trans-acting enoyl reduct | yes | no | 0.431 | 0.466 | 0.313 | 3e-23 |
| >sp|Q8LGI2|SCPDL_ARATH Probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410 OS=Arabidopsis thaliana GN=At5g39410 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 671 bits (1731), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/450 (73%), Positives = 394/450 (87%), Gaps = 11/450 (2%)
Query: 5 SQIPE-LFDVIILGASGFTGKYVVREALKLFNFPSS-PIKSLALAGRNPTRVKQALQWAS 62
+Q PE ++D++ILGASGFTGKYVVREALK PSS P+KSLALAGRNPTR+ Q+L+WA+
Sbjct: 4 TQKPEPVYDMVILGASGFTGKYVVREALKFLQTPSSSPLKSLALAGRNPTRLTQSLEWAA 63
Query: 63 -----PSHSLSIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDY 117
PS S+ ILTADT+DP SL RLC+QTKL+LNCVGP+R+HGDPV +AC SGCDY
Sbjct: 64 RPNPPPS---SVAILTADTSDPDSLRRLCTQTKLILNCVGPFRIHGDPVVSACADSGCDY 120
Query: 118 LDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWIPPAVPNQIE 177
LDISGEPEFMERMEA YH++A ETGSL+VSACGFDSIPAELG++FN++QW+ P+VPNQIE
Sbjct: 121 LDISGEPEFMERMEANYHDRAEETGSLIVSACGFDSIPAELGLLFNAKQWVSPSVPNQIE 180
Query: 178 AYVSLESDKRIVGNFGTYESAVLGVANAQELQKLRRSRPRRARPVIPGPAPLRGPLVESQ 237
AY+SLESDK+I GNFGTYESAVLGVANA++L++LRRSRPRR RP I GP P +GP +E+Q
Sbjct: 181 AYLSLESDKKIAGNFGTYESAVLGVANAEKLKELRRSRPRRPRPTICGP-PAKGPTLENQ 239
Query: 238 KRIGLWAIKLPSADATVVRRTLSILTENPHGLPGANESPEQREKREAFWSTVKPAHFGVK 297
K IGLWA+KLPSADA VVRRTL+ LTE PHGLPG NESPEQ +KREAFWS++KPAHFGVK
Sbjct: 240 KTIGLWALKLPSADAVVVRRTLTTLTEKPHGLPGINESPEQIQKREAFWSSIKPAHFGVK 299
Query: 298 LGSKSLLDIFRFIILGISIGLLSGLSFGRWLLLKFPSIFSLGWFRKRGPSEDEVESASFK 357
+ SKSL IFR++ LG+S+GLLS SFGRWLLLKFPS+FSLGWF+K+GPSE+EVESA+FK
Sbjct: 300 ITSKSLFGIFRYVTLGVSLGLLSKFSFGRWLLLKFPSVFSLGWFQKKGPSEEEVESATFK 359
Query: 358 MWFIGHGFSDSSLVSQGNAKPDMEIITRVTGPEIGYIATPIILMQCALIVLSQREILPKG 417
MWFIG G+S+ SL SQG KPD+EIITR++GPEIGYI TPI L+QC LIVL QRE L KG
Sbjct: 360 MWFIGRGYSEESLASQGETKPDLEIITRISGPEIGYITTPITLVQCGLIVLGQRESLVKG 419
Query: 418 GVFPPGIVFGATELQQRLQENGISFDVISK 447
GV+ PGIVFG+T++QQRL++NGISF++ISK
Sbjct: 420 GVYTPGIVFGSTDIQQRLEDNGISFELISK 449
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Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: -EC: .EC: -EC: .EC: - |
| >sp|Q8R127|SCPDL_MOUSE Saccharopine dehydrogenase-like oxidoreductase OS=Mus musculus GN=Sccpdh PE=2 SV=1 | Back alignment and function description |
|---|
Score = 278 bits (712), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 162/448 (36%), Positives = 251/448 (56%), Gaps = 34/448 (7%)
Query: 11 FDVIILGASGFTGKYVVRE-ALKLFNFPSSPIKSLALAGRNPTRVKQALQWAS-----PS 64
F +++ GASGFTG++V E A + S A+AGR+ +++Q L+ A+ PS
Sbjct: 8 FHLVVFGASGFTGQFVTEEVAREQIASEQSSRLPWAVAGRSKEKLQQVLEKAAQKLGRPS 67
Query: 65 HSLSIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEP 124
S + ++ D ++P SL + Q KL+LNCVGPYR +G+PV AC+ +G +DI GEP
Sbjct: 68 LSSEVGVIICDISNPASLDEMAKQAKLVLNCVGPYRFYGEPVVKACIENGTSCIDICGEP 127
Query: 125 EFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWIPPAVPNQIEAYVSLES 184
+F+E M A+YHEKA E G ++ + GFDSIPA+LGV++ Q +E+++++ +
Sbjct: 128 QFLELMHAKYHEKAAEKGVYIIGSSGFDSIPADLGVLYTRNQM--NGTLTAVESFLTINT 185
Query: 185 D-KRIVGNFGTYESAVLGVANAQELQKLRRSRPRRARPVIPGPAPLRGPLVESQKRIGLW 243
+ + + GT++SA+ G + L+KLR + P++ R P V + + +
Sbjct: 186 GPEGLCIHDGTWKSAIYGFGDKGSLRKLRSVSCLKPVPIVGTKLKRRWP-VSYCRELNSY 244
Query: 244 AIKLPSADATVVRRTLSILTENPHGLPGANESPEQREKREAFWSTVKPAHFGVKLGSKSL 303
+I +D +VV+RT L EN +SP Q A + TV +
Sbjct: 245 SIPFLGSDISVVKRTQRYLHEN------LEDSPVQY----AAYVTV-----------GGI 283
Query: 304 LDIFRFIILGISIGLLSGLSFGRWLLLKFPSIFSLGWFRKRGPSEDEVESASFKMWFIGH 363
+ + + G+ S GR LL+KFP +FS G+F K+GP++ +++ SF M F G
Sbjct: 284 TSVIKLMFAGLFFLFFVKFSIGRQLLIKFPWLFSFGYFSKQGPTQKQMDETSFTMTFFGQ 343
Query: 364 GFSDSSLVSQGNAKPDMEIITRVTGPEIGYIATPIILMQCALIVLSQREILPK-GGVFPP 422
G+S + V + KP++ I T+V GPE GY+ATPI ++Q A+ LS LPK GGVF P
Sbjct: 344 GYSHGTCVEKN--KPNIRICTQVKGPEAGYVATPIAMVQAAMTFLSDASDLPKGGGVFTP 401
Query: 423 GIVFGATELQQRLQENGISFDVISKSSL 450
G F T+L RL ++GI F VIS S +
Sbjct: 402 GAAFSRTKLIDRLNKHGIEFSVISSSEV 429
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Mus musculus (taxid: 10090) EC: 1 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|Q6AY30|SCPDL_RAT Saccharopine dehydrogenase-like oxidoreductase OS=Rattus norvegicus GN=Sccpdh PE=2 SV=1 | Back alignment and function description |
|---|
Score = 275 bits (702), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 158/448 (35%), Positives = 243/448 (54%), Gaps = 34/448 (7%)
Query: 11 FDVIILGASGFTGKYVVRE-ALKLFNFPSSPIKSLALAGRNPTRVKQALQWAS-----PS 64
F +++ GASGFTG++V E A + S A+AGR+ +++Q L+ A+ +
Sbjct: 8 FQLVVFGASGFTGQFVTEEVAREQMASEQSSRLPWAVAGRSKEKLQQVLEKAAQKLGRAT 67
Query: 65 HSLSIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEP 124
S + I+ D ++P SL + + L+LNCVGPYR +G+PV AC+ +G +DI GEP
Sbjct: 68 LSSEVGIIICDISNPASLDEMAKKATLVLNCVGPYRFYGEPVVKACIENGTSCIDICGEP 127
Query: 125 EFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWIPPAVPNQIEAYVSLES 184
+F+E M +YHEKA E G ++ + GFDSIPA+LGV++ Q +E+++++ S
Sbjct: 128 QFLELMHVKYHEKAAEKGVYIIGSSGFDSIPADLGVLYTRNQM--NGTLTAVESFLTINS 185
Query: 185 D-KRIVGNFGTYESAVLGVANAQELQKLRRSRPRRARPVIPGPAPLRGPLVESQKRIGLW 243
+ + + GT++SA+ G + L+KLR + PVI R P V + + +
Sbjct: 186 GPEGLCIHDGTWKSAIYGFGDKGSLRKLRSVSNLKPVPVIGSKLKRRWP-VSYCRELNSY 244
Query: 244 AIKLPSADATVVRRTLSILTENPHGLPGANESPEQREKREAFWSTVKPAHFGVKLGSKSL 303
AI +D +VV+RT L EN P + + +
Sbjct: 245 AIPFLGSDMSVVKRTQRYLHENLED---------------------SPVQYAAYITVGGI 283
Query: 304 LDIFRFIILGISIGLLSGLSFGRWLLLKFPSIFSLGWFRKRGPSEDEVESASFKMWFIGH 363
+ + + G+ S GR LL+KFP +FS G+F KRGP++ +++ +SF M F G
Sbjct: 284 TSVIKLMFAGLFFLFFVKFSIGRQLLVKFPWLFSFGYFSKRGPTQKQMDESSFTMTFFGQ 343
Query: 364 GFSDSSLVSQGNAKPDMEIITRVTGPEIGYIATPIILMQCALIVLSQREILPK-GGVFPP 422
G+S VS KP++ I T+V GPE GY+ATPI ++Q A+ L+ LPK GGVF P
Sbjct: 344 GYSHG--VSAEKNKPNIRICTQVKGPEAGYVATPIAMVQAAVTFLNDASDLPKGGGVFTP 401
Query: 423 GIVFGATELQQRLQENGISFDVISKSSL 450
G F T+L RL ++GI F VIS S +
Sbjct: 402 GAAFSRTKLIDRLNQHGIQFSVISSSEV 429
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Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|Q8NBX0|SCPDL_HUMAN Saccharopine dehydrogenase-like oxidoreductase OS=Homo sapiens GN=SCCPDH PE=1 SV=1 | Back alignment and function description |
|---|
Score = 272 bits (696), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 165/448 (36%), Positives = 254/448 (56%), Gaps = 34/448 (7%)
Query: 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIK-SLALAGRNPTRV-----KQALQWASPS 64
F +++ GASGFTG++V E + P + A+AGR+ ++ K AL+ P+
Sbjct: 8 FHLVVFGASGFTGQFVTEEVAREQVDPERSSRLPWAVAGRSREKLQRVLEKAALKLGRPT 67
Query: 65 HSLSIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEP 124
S + I+ D +P SL + Q ++LNCVGPYR +G+PV AC+ +G +DISGEP
Sbjct: 68 LSSEVGIIICDIANPASLDEMAKQATVVLNCVGPYRFYGEPVIKACIENGASCIDISGEP 127
Query: 125 EFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWIPPAVPNQIEAYVSLES 184
+F+E M+ +YHEKA + G ++ + GFDSIPA+LGV++ + +E+++++ S
Sbjct: 128 QFLELMQLKYHEKAADKGVYIIGSSGFDSIPADLGVIYTRNKM--NGTLTAVESFLTIHS 185
Query: 185 D-KRIVGNFGTYESAVLGVANAQELQKLRRSRPRRARPVIPGPAPLRGPLVESQKRIGLW 243
+ + + GT++SA+ G + L+KLR + P+I R P+ ++ G +
Sbjct: 186 GPEGLSIHDGTWKSAIYGFGDQSNLRKLRNVSNLKPVPLIGPKLKRRWPISYCRELKG-Y 244
Query: 244 AIKLPSADATVVRRTLSILTENPHGLPGANESPEQREKREAFWSTVKPAHFGVKLGSKSL 303
+I +D +VVRRT L EN ESP Q A + TV +KL L
Sbjct: 245 SIPFMGSDVSVVRRTQRYLYEN------LEESPVQY----AAYVTVGGITSVIKLMFAGL 294
Query: 304 LDIFRFIILGISIGLLSGLSFGRWLLLKFPSIFSLGWFRKRGPSEDEVESASFKMWFIGH 363
+F F+ GI GR LL+KFP FS G+F K+GP++ ++++ASF + F G
Sbjct: 295 FFLF-FVRFGI----------GRQLLIKFPWFFSFGYFSKQGPTQKQIDAASFTLTFFGQ 343
Query: 364 GFSDSSLVSQGNAKPDMEIITRVTGPEIGYIATPIILMQCALIVLSQREILPK-GGVFPP 422
G+S + + KP+++I T+V GPE GY+ATPI ++Q A+ +LS LPK GGVF P
Sbjct: 344 GYSQGTGTDKN--KPNIKICTQVKGPEAGYVATPIAMVQAAMTLLSDASHLPKAGGVFTP 401
Query: 423 GIVFGATELQQRLQENGISFDVISKSSL 450
G F T+L RL ++GI F VIS S +
Sbjct: 402 GAAFSKTKLIDRLNKHGIEFSVISSSEV 429
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Homo sapiens (taxid: 9606) EC: 1 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|Q5R5C9|SCPDL_PONAB Saccharopine dehydrogenase-like oxidoreductase OS=Pongo abelii GN=SCCPDH PE=2 SV=1 | Back alignment and function description |
|---|
Score = 270 bits (690), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 162/448 (36%), Positives = 254/448 (56%), Gaps = 34/448 (7%)
Query: 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIK-SLALAGRNPTRV-----KQALQWASPS 64
F +++ GASGFTG++V E + P + A+AGR+ ++ K AL+ P+
Sbjct: 8 FHLVVFGASGFTGQFVTEEVAREQVDPERSSRLPWAVAGRSREKLQRVLEKAALKLGRPT 67
Query: 65 HSLSIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEP 124
S + I+ D +P SL + Q ++ NCVGPYR +G+PV AC+ +G +DISGEP
Sbjct: 68 LSSEVGIIICDIANPASLDEMAKQATVVPNCVGPYRFYGEPVIKACIENGASCIDISGEP 127
Query: 125 EFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWIPPAVPNQIEAYVSLES 184
+F+E M+ +YHEKA + G ++ + GFDSIPA+LGV++ + +E+++++ S
Sbjct: 128 QFLELMQLKYHEKAADKGVYIIGSSGFDSIPADLGVIYTRNKM--NGTLTAVESFLTIHS 185
Query: 185 D-KRIVGNFGTYESAVLGVANAQELQKLRRSRPRRARPVIPGPAPLRGPLVESQKRIGLW 243
+ + + GT++SA+ G + L+KLR + + P++ R P+ ++ G +
Sbjct: 186 GPEGLSIHDGTWKSAIYGFGDQSNLRKLRNASNLKPVPLVGPKLKRRWPISYCRELKG-Y 244
Query: 244 AIKLPSADATVVRRTLSILTENPHGLPGANESPEQREKREAFWSTVKPAHFGVKLGSKSL 303
+I +D +VVRRT L EN ESP Q A ++TV +KL L
Sbjct: 245 SIPFMGSDVSVVRRTQRYLYEN------LEESPVQY----AAYATVGGITSVIKLMFAGL 294
Query: 304 LDIFRFIILGISIGLLSGLSFGRWLLLKFPSIFSLGWFRKRGPSEDEVESASFKMWFIGH 363
+F F+ GI GR LL+KFP FS G+F K+GP++ ++++ASF + F G
Sbjct: 295 FFLF-FVRFGI----------GRQLLIKFPWFFSFGYFSKQGPTQKQIDAASFTLTFFGQ 343
Query: 364 GFSDSSLVSQGNAKPDMEIITRVTGPEIGYIATPIILMQCALIVLSQREILPK-GGVFPP 422
G+S + KP+++I T+V GPE GY+ATPI ++Q A+ +L+ LPK GGVF P
Sbjct: 344 GYSQG--IGTDKNKPNIKICTQVKGPEAGYVATPIAMVQAAMTLLNDASHLPKAGGVFTP 401
Query: 423 GIVFGATELQQRLQENGISFDVISKSSL 450
G F T+L RL ++GI F VIS S +
Sbjct: 402 GAAFSKTKLIDRLNKHGIEFSVISSSEV 429
|
Pongo abelii (taxid: 9601) EC: 1 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|Q3T067|SCPDL_BOVIN Saccharopine dehydrogenase-like oxidoreductase OS=Bos taurus GN=SCCPDH PE=2 SV=1 | Back alignment and function description |
|---|
Score = 268 bits (686), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 157/451 (34%), Positives = 249/451 (55%), Gaps = 40/451 (8%)
Query: 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKS----LALAGRNPTRVKQALQWAS---- 62
F +++ GASGFTG++V E + SP ++ A+AGR+ ++ + L+ A+
Sbjct: 8 FHLVVFGASGFTGQFVTEEVARE---QVSPERTSHLPWAVAGRSREKLLRVLERAAMKLG 64
Query: 63 -PSHSLSIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121
P+ S + I+ D T+P SL + Q ++LNCVGPYR +G+PV AC+ +G +DIS
Sbjct: 65 RPTLSSEVGIIICDITNPASLDEMAKQATVVLNCVGPYRFYGEPVIKACIENGTSCIDIS 124
Query: 122 GEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWIPPAVPNQIEAYVS 181
GEP+F+E M +YHEKA E G ++ + GFDSIPA+LGV++ + +E++++
Sbjct: 125 GEPQFLELMYWKYHEKAAEKGVYIIGSSGFDSIPADLGVIYTRNKM--NGTLTAVESFLT 182
Query: 182 LESD-KRIVGNFGTYESAVLGVANAQELQKLRRSRPRRARPVIPGPAPLRGPLVESQKRI 240
+ S + + + GT++SAV G + L+KLR + P++ GP R + + +
Sbjct: 183 ISSGPEGLCVHDGTWKSAVYGFGDKSNLKKLRNESDMKPVPIV-GPKLKRRWPISYCREL 241
Query: 241 GLWAIKLPSADATVVRRTLSILTENPHGLPGANESPEQREKREAFWSTVKPAHFGVKLGS 300
++I AD +VV+RT L EN EQ P + +
Sbjct: 242 NSYSIPFLGADVSVVKRTQRYLHEN----------LEQ-----------SPVQYAAYINV 280
Query: 301 KSLLDIFRFIILGISIGLLSGLSFGRWLLLKFPSIFSLGWFRKRGPSEDEVESASFKMWF 360
+ + + + G+ GR LL+KF +FS G+F K+GP++ +++++SF M F
Sbjct: 281 GGITSVIKLMFAGLFFLFFVRFGIGRQLLIKFTWLFSFGYFSKQGPTQKQIDASSFTMTF 340
Query: 361 IGHGFSDSSLVSQGNAKPDMEIITRVTGPEIGYIATPIILMQCALIVLSQREILPK-GGV 419
G GFS VS KP++ I T+V GPE GY++T I ++Q A+I+L+ LPK GGV
Sbjct: 341 FGQGFSQG--VSPVKNKPNIRICTQVKGPEAGYVSTSIAMVQAAMILLNDASDLPKAGGV 398
Query: 420 FPPGIVFGATELQQRLQENGISFDVISKSSL 450
F PG F T+L RL E+GI F VIS + +
Sbjct: 399 FTPGAAFSRTKLIDRLNEHGIEFSVISSTEV 429
|
Bos taurus (taxid: 9913) EC: 1 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|Q7D745|Y2525_MYCTU Putative trans-acting enoyl reductase MT2525 OS=Mycobacterium tuberculosis GN=MT2525 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 115 bits (289), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 94/156 (60%), Gaps = 6/156 (3%)
Query: 5 SQIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS 64
+ P FD+++ GA+GF GK + + +ALAGR+ RV A++ A
Sbjct: 2 TATPREFDIVLYGATGFVGKLTAEYLAR-----AGGDARIALAGRSTQRV-LAVREALGE 55
Query: 65 HSLSIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEP 124
+ + PILTAD + P +L + ++ ++++ VGPY +G P+ AAC +G DY D++GEP
Sbjct: 56 SAQTWPILTADASLPSTLQAMAARAQVVVTTVGPYTRYGLPLVAACAAAGTDYADLTGEP 115
Query: 125 EFMERMEARYHEKAVETGSLLVSACGFDSIPAELGV 160
FM YH++A +TG+ +V ACGFDS+P++L V
Sbjct: 116 MFMRNSIDLYHKQAADTGARIVHACGFDSVPSDLSV 151
|
Mycobacterium tuberculosis (taxid: 1773) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
| >sp|O53176|Y2449_MYCTU Putative trans-acting enoyl reductase Rv2449c OS=Mycobacterium tuberculosis GN=Rv2449c PE=1 SV=3 | Back alignment and function description |
|---|
Score = 115 bits (289), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 94/156 (60%), Gaps = 6/156 (3%)
Query: 5 SQIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS 64
+ P FD+++ GA+GF GK + + +ALAGR+ RV A++ A
Sbjct: 2 TATPREFDIVLYGATGFVGKLTAEYLAR-----AGGDARIALAGRSTQRV-LAVREALGE 55
Query: 65 HSLSIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEP 124
+ + PILTAD + P +L + ++ ++++ VGPY +G P+ AAC +G DY D++GEP
Sbjct: 56 SAQTWPILTADASLPSTLQAMAARAQVVVTTVGPYTRYGLPLVAACAAAGTDYADLTGEP 115
Query: 125 EFMERMEARYHEKAVETGSLLVSACGFDSIPAELGV 160
FM YH++A +TG+ +V ACGFDS+P++L V
Sbjct: 116 MFMRNSIDLYHKQAADTGARIVHACGFDSVPSDLSV 151
|
Mycobacterium tuberculosis (taxid: 1773) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
| >sp|Q9CD87|TAER_MYCLE Trans-acting enoyl reductase OS=Mycobacterium leprae (strain TN) GN=ML0129 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 110/204 (53%), Gaps = 9/204 (4%)
Query: 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIP 70
FD+++ GA+GF+GK + E L L S +ALAGR+ R++ P ++ P
Sbjct: 8 FDIVLYGATGFSGK-LTAEHLAL----SESTARIALAGRSSERLRNVRALLGP-NAQDWP 61
Query: 71 ILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERM 130
++ AD + P +L + + +++L VGPY +G P+ AAC +G DY D++GE F
Sbjct: 62 LIVADASQPSTLEAMAGRAQVVLTTVGPYTRYGLPLVAACARTGTDYADLTGELMFCRNS 121
Query: 131 EARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWIPPAVPNQIEAYVSLES-DKRIV 189
+H++A TG+ ++ ACGFDS+P++L V R+ I + + L S +R V
Sbjct: 122 IDLHHKQAAATGARIILACGFDSVPSDLNVYQLYRRVIEDRTGELCDTDLVLRSFSQRWV 181
Query: 190 --GNFGTYESAVLGVANAQELQKL 211
G+ Y A+L +N E +L
Sbjct: 182 SGGSVAAYSEAMLTTSNDPEALRL 205
|
Involved in the reduction of the double bond between C-4 and C-5 during phthiocerol dimycocerosates (DIM A) and glycosylated phenolphthiocerol dimycocerosates (PGL) biosynthesis. Mycobacterium leprae (taxid: 1769) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
| >sp|P95139|TAER_MYCTU Trans-acting enoyl reductase OS=Mycobacterium tuberculosis GN=Rv2953 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 109/204 (53%), Gaps = 9/204 (4%)
Query: 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIP 70
FD+++ GA+GF+GK S +ALAGR+ R++ P ++ P
Sbjct: 8 FDIVLYGATGFSGKLTAEHLAH-----SGSTARIALAGRSSERLRGVRMMLGP-NAADWP 61
Query: 71 ILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERM 130
++ AD + P +L + ++ +++L VGPY +G P+ AAC +G DY D++GE F
Sbjct: 62 LILADASQPLTLEAMAARAQVVLTTVGPYTRYGLPLVAACAKAGTDYADLTGELMFCRNS 121
Query: 131 EARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWIPPAVPNQIEAYVSLES-DKRIV 189
YH++A +TG+ ++ ACGFDSIP++L V R+ + + + L S +R V
Sbjct: 122 IDLYHKQAADTGARIILACGFDSIPSDLNVYQLYRRSVEDGTGELCDTDLVLRSFSQRWV 181
Query: 190 --GNFGTYESAVLGVANAQELQKL 211
G+ TY A+ ++ E ++L
Sbjct: 182 SGGSVATYSEAMRTASSDPEARRL 205
|
Involved in the reduction of the double bond between C-4 and C-5 during phthiocerol dimycocerosates (DIM A) and glycosylated phenolphthiocerol dimycocerosates (PGL) biosynthesis. Mycobacterium tuberculosis (taxid: 1773) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 452 | ||||||
| 224077724 | 458 | predicted protein [Populus trichocarpa] | 0.982 | 0.969 | 0.744 | 0.0 | |
| 297801672 | 453 | hypothetical protein ARALYDRAFT_494045 [ | 0.971 | 0.969 | 0.739 | 0.0 | |
| 21536519 | 453 | unknown [Arabidopsis thaliana] | 0.971 | 0.969 | 0.732 | 0.0 | |
| 255584329 | 457 | conserved hypothetical protein [Ricinus | 1.0 | 0.989 | 0.721 | 0.0 | |
| 18421863 | 454 | Saccharopine dehydrogenase [Arabidopsis | 0.971 | 0.966 | 0.733 | 0.0 | |
| 225452928 | 451 | PREDICTED: probable mitochondrial saccha | 0.991 | 0.993 | 0.753 | 0.0 | |
| 356523590 | 451 | PREDICTED: probable mitochondrial saccha | 0.973 | 0.975 | 0.736 | 0.0 | |
| 357502067 | 450 | hypothetical protein MTR_7g011890 [Medic | 0.973 | 0.977 | 0.739 | 0.0 | |
| 449437814 | 442 | PREDICTED: probable mitochondrial saccha | 0.964 | 0.986 | 0.706 | 1e-174 | |
| 356551032 | 444 | PREDICTED: probable mitochondrial saccha | 0.960 | 0.977 | 0.655 | 1e-165 |
| >gi|224077724|ref|XP_002305380.1| predicted protein [Populus trichocarpa] gi|222848344|gb|EEE85891.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 695 bits (1793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/446 (74%), Positives = 383/446 (85%), Gaps = 2/446 (0%)
Query: 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSL 67
P L+D+IILGASGFTGKYVV+EALK N PSSP+KSLALAGRNPT++ Q L+WAS
Sbjct: 14 PTLYDLIILGASGFTGKYVVKEALKFLNVPSSPLKSLALAGRNPTKLAQTLKWASHPDHP 73
Query: 68 SIPI-LTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEF 126
LTADTTDP SLH LCSQ+KL+LNCVGP+RL G+PV AAC +GCDYLDI GEPEF
Sbjct: 74 PPIPILTADTTDPASLHHLCSQSKLILNCVGPFRLLGEPVVAACAETGCDYLDICGEPEF 133
Query: 127 MERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWIPPAVPNQIEAYVSLESDK 186
MERME +YHEKA+ETGSL+VSACGFDS+PAELG MFNSR W+ PA PNQIEAY+SLES+K
Sbjct: 134 MERMEVKYHEKAMETGSLVVSACGFDSVPAELGWMFNSRHWVGPAAPNQIEAYLSLESEK 193
Query: 187 RIVGNFGTYESAVLGVANAQELQKLRRSRPRRARPVIPGPAPLRGPLVESQKRIGLWAIK 246
RIVGNFGTYESAVLGVAN ++L +LRRSRP+RARP IPGP P +GP+++ QK IGLWA+K
Sbjct: 194 RIVGNFGTYESAVLGVANVEQLVELRRSRPKRARPAIPGPFPTKGPMIDHQKEIGLWAVK 253
Query: 247 LPSADATVVRRTLSILTENPHGLPGANESPEQREKREAFWSTVKPAHFGVKLGSKSLLDI 306
LPSAD+ VVRRTL+ LTENP GLPG NESPEQ EKR+AFWSTVKPAHFGVKLGSK+LL +
Sbjct: 254 LPSADSVVVRRTLTTLTENPRGLPGLNESPEQIEKRDAFWSTVKPAHFGVKLGSKTLLGV 313
Query: 307 FRFIILGISIGLLSGLSFGRWLLLKFPSIFSLGWFRKRGPSEDEVESASFKMWFIGHGFS 366
FRFI +G+ IGLL + GRWLLLKFPS FSLGWFRK+GPS+DEV SASFKMWF+G GFS
Sbjct: 314 FRFIAVGMFIGLLGRNAIGRWLLLKFPSFFSLGWFRKKGPSDDEVRSASFKMWFVGRGFS 373
Query: 367 DSSLVSQGNAKPDMEIITRVTGPEIGYIATPIILMQCALIVLSQREILPKGGVFPPGIVF 426
D + VSQ KPDMEIITRV GPEIGY+ TPIIL+QCA I+LS R+ LPKGGVFPPGIVF
Sbjct: 374 DMN-VSQDKKKPDMEIITRVVGPEIGYLTTPIILVQCARILLSHRDNLPKGGVFPPGIVF 432
Query: 427 GATELQQRLQENGISFDVISKSSLPA 452
G T+LQ++L++NGISFD+ISK S+ A
Sbjct: 433 GPTDLQEQLEQNGISFDLISKKSILA 458
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297801672|ref|XP_002868720.1| hypothetical protein ARALYDRAFT_494045 [Arabidopsis lyrata subsp. lyrata] gi|297314556|gb|EFH44979.1| hypothetical protein ARALYDRAFT_494045 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/449 (73%), Positives = 394/449 (87%), Gaps = 10/449 (2%)
Query: 5 SQIPE-LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWAS- 62
+Q P+ ++D++ILGASG+TGKYVVREALK PSSP+KSLALAGRNPTR+ Q+L+WA+
Sbjct: 4 TQKPDPVYDIVILGASGYTGKYVVREALKFLQTPSSPLKSLALAGRNPTRLTQSLEWAAR 63
Query: 63 ----PSHSLSIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYL 118
PS S+ ILTADT+DP SL RLC+QTKL+LNCVGP+R+HGDPV +AC SGCDYL
Sbjct: 64 PNPPPS---SVAILTADTSDPDSLRRLCTQTKLILNCVGPFRIHGDPVVSACADSGCDYL 120
Query: 119 DISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWIPPAVPNQIEA 178
DISGEPEFMERMEA YHE+A ETGSL+VSACGFDSIPAELG++FN++QW+ P+VPNQIEA
Sbjct: 121 DISGEPEFMERMEANYHERAEETGSLIVSACGFDSIPAELGLLFNAKQWVSPSVPNQIEA 180
Query: 179 YVSLESDKRIVGNFGTYESAVLGVANAQELQKLRRSRPRRARPVIPGPAPLRGPLVESQK 238
Y+SLESDK+I GNFGTYESAVLGVANA++L++LRRSRPRR RP I GP P +GP +E+QK
Sbjct: 181 YLSLESDKKIAGNFGTYESAVLGVANAEKLKELRRSRPRRPRPSICGP-PAKGPTLENQK 239
Query: 239 RIGLWAIKLPSADATVVRRTLSILTENPHGLPGANESPEQREKREAFWSTVKPAHFGVKL 298
IGLWA+KLPSADA VVRRTL+ LTE PHGLPG NESPEQ +KREAFWS++KPAHFGVK+
Sbjct: 240 TIGLWALKLPSADAVVVRRTLTTLTEKPHGLPGLNESPEQIQKREAFWSSIKPAHFGVKI 299
Query: 299 GSKSLLDIFRFIILGISIGLLSGLSFGRWLLLKFPSIFSLGWFRKRGPSEDEVESASFKM 358
SKSL IFR++ LG+S+GLLS SFGRWLLLKFPS+FSLGWF+K+GPSE+EVESA+FKM
Sbjct: 300 TSKSLFGIFRYVTLGVSLGLLSKFSFGRWLLLKFPSVFSLGWFQKKGPSEEEVESATFKM 359
Query: 359 WFIGHGFSDSSLVSQGNAKPDMEIITRVTGPEIGYIATPIILMQCALIVLSQREILPKGG 418
WFIG G+S+ SL SQG KPD+EIITR++GPEIGYI TPI L+QC LIVL QRE L KGG
Sbjct: 360 WFIGRGYSEESLASQGETKPDLEIITRISGPEIGYITTPITLVQCGLIVLGQRESLVKGG 419
Query: 419 VFPPGIVFGATELQQRLQENGISFDVISK 447
VF PGIVFG+T++QQRL+ENGISF+VISK
Sbjct: 420 VFTPGIVFGSTDIQQRLEENGISFEVISK 448
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|21536519|gb|AAM60851.1| unknown [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/449 (73%), Positives = 395/449 (87%), Gaps = 10/449 (2%)
Query: 5 SQIPE-LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWAS- 62
+Q P+ ++D++ILGASGFTGKYVVREALK PSSP+KSLALAGRNPTR+ Q+L+WA+
Sbjct: 4 TQKPDPVYDIVILGASGFTGKYVVREALKFLQTPSSPLKSLALAGRNPTRLTQSLEWAAR 63
Query: 63 ----PSHSLSIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYL 118
PS S+ ILTADT+DP SL RLC+QTKL+LNCVGP+R+HGDPV +AC SGCDYL
Sbjct: 64 PNPPPS---SVAILTADTSDPDSLRRLCTQTKLILNCVGPFRIHGDPVVSACADSGCDYL 120
Query: 119 DISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWIPPAVPNQIEA 178
DISGEPEFMERMEA+YH++A ETGSL+VSACGFDSIPAELG++FN++QW+ P+VPNQIEA
Sbjct: 121 DISGEPEFMERMEAKYHDRAEETGSLIVSACGFDSIPAELGLLFNAKQWVSPSVPNQIEA 180
Query: 179 YVSLESDKRIVGNFGTYESAVLGVANAQELQKLRRSRPRRARPVIPGPAPLRGPLVESQK 238
Y+SLESDK+I GNFGTYESAVLGVANA++L++LRRSRPRR RP I GP P +GP +E+QK
Sbjct: 181 YLSLESDKKIAGNFGTYESAVLGVANAEKLKELRRSRPRRPRPTICGP-PAKGPTLENQK 239
Query: 239 RIGLWAIKLPSADATVVRRTLSILTENPHGLPGANESPEQREKREAFWSTVKPAHFGVKL 298
IGLWA+KLPSADA VVRRTL+ LTE PHGLPG NESPEQ +KREAFWS++KPAHFGVK+
Sbjct: 240 TIGLWALKLPSADAVVVRRTLTTLTEKPHGLPGINESPEQIQKREAFWSSIKPAHFGVKI 299
Query: 299 GSKSLLDIFRFIILGISIGLLSGLSFGRWLLLKFPSIFSLGWFRKRGPSEDEVESASFKM 358
SKSL IFR++ LG+S+GLLS SFGRWLLLKFPS+FSLGWF+K+GPSE+EVESA+FKM
Sbjct: 300 TSKSLFGIFRYVTLGVSLGLLSKFSFGRWLLLKFPSVFSLGWFQKKGPSEEEVESATFKM 359
Query: 359 WFIGHGFSDSSLVSQGNAKPDMEIITRVTGPEIGYIATPIILMQCALIVLSQREILPKGG 418
WFIG G+S+ SL SQG KPD+EIITR++GPEIGYI TPI L+QC LIVL QRE L KGG
Sbjct: 360 WFIGRGYSEESLASQGETKPDLEIITRISGPEIGYITTPITLLQCGLIVLGQRESLVKGG 419
Query: 419 VFPPGIVFGATELQQRLQENGISFDVISK 447
V+ PGIVFG+T++QQRL++NGISF++ISK
Sbjct: 420 VYTPGIVFGSTDIQQRLEDNGISFELISK 448
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255584329|ref|XP_002532900.1| conserved hypothetical protein [Ricinus communis] gi|223527334|gb|EEF29480.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 676 bits (1744), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/453 (72%), Positives = 385/453 (84%), Gaps = 1/453 (0%)
Query: 1 MQAQSQIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQW 60
M+ S+ +D+IILGASGFTGKYV++EALK N SSP+K+LALAGRNPTR+ Q+L W
Sbjct: 1 MENLSEFHPPYDLIILGASGFTGKYVIKEALKFLNTSSSPLKTLALAGRNPTRLTQSLNW 60
Query: 61 AS-PSHSLSIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLD 119
A+ P+ SIPI+TADTTDP S+ LC+QTKL+L+CVGP+RLH + V AAC +GCDYLD
Sbjct: 61 AAHPNPPPSIPIITADTTDPASIRHLCTQTKLILSCVGPFRLHSESVVAACADTGCDYLD 120
Query: 120 ISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWIPPAVPNQIEAY 179
I GEPEFMERME +YHEKA+E GSL+VSACGFDS+PAE+G MFNSRQW+ P+ PNQIEAY
Sbjct: 121 ICGEPEFMERMELKYHEKAMENGSLVVSACGFDSVPAEIGWMFNSRQWVAPSEPNQIEAY 180
Query: 180 VSLESDKRIVGNFGTYESAVLGVANAQELQKLRRSRPRRARPVIPGPAPLRGPLVESQKR 239
+SLES+KRIVGNFGTYESAVLGVAN +LQ+LR+SR +RARPVIPGP P +GP+++ QK
Sbjct: 181 LSLESEKRIVGNFGTYESAVLGVANVDKLQELRQSRSKRARPVIPGPFPPKGPMIDHQKE 240
Query: 240 IGLWAIKLPSADATVVRRTLSILTENPHGLPGANESPEQREKREAFWSTVKPAHFGVKLG 299
IGLWA+KLPSAD+ VVRRTLS LTENP GLPG +ES EQ EKRE FWS VKPAHFGVKL
Sbjct: 241 IGLWAVKLPSADSVVVRRTLSTLTENPRGLPGVDESAEQIEKREEFWSAVKPAHFGVKLS 300
Query: 300 SKSLLDIFRFIILGISIGLLSGLSFGRWLLLKFPSIFSLGWFRKRGPSEDEVESASFKMW 359
SK++L IFR I +G+ IGLL S GRWLLLKFPS+FSLGWFRK+GPSEDEV SA+FKMW
Sbjct: 301 SKTILGIFRSITVGMFIGLLGRNSIGRWLLLKFPSVFSLGWFRKKGPSEDEVRSATFKMW 360
Query: 360 FIGHGFSDSSLVSQGNAKPDMEIITRVTGPEIGYIATPIILMQCALIVLSQREILPKGGV 419
F+G GFSD + VSQ N KPDMEI+TRV GPEIGY+ TPIIL+QCALI+LS+R LPKGGV
Sbjct: 361 FVGRGFSDVNQVSQANMKPDMEIVTRVMGPEIGYLTTPIILVQCALILLSERNNLPKGGV 420
Query: 420 FPPGIVFGATELQQRLQENGISFDVISKSSLPA 452
FPPGIVFG T+LQ+RLQ NGISFD ISK +LP+
Sbjct: 421 FPPGIVFGPTDLQERLQRNGISFDFISKRALPS 453
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|18421863|ref|NP_568564.1| Saccharopine dehydrogenase [Arabidopsis thaliana] gi|90173749|sp|Q8LGI2.2|SCPDL_ARATH RecName: Full=Probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410; Short=SDH gi|4099092|gb|AAD09232.1| unknown [Arabidopsis thaliana] gi|10177688|dbj|BAB11014.1| unnamed protein product [Arabidopsis thaliana] gi|115646780|gb|ABJ17115.1| At5g39410 [Arabidopsis thaliana] gi|332007047|gb|AED94430.1| Saccharopine dehydrogenase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 671 bits (1731), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/450 (73%), Positives = 394/450 (87%), Gaps = 11/450 (2%)
Query: 5 SQIPE-LFDVIILGASGFTGKYVVREALKLFNFPSS-PIKSLALAGRNPTRVKQALQWAS 62
+Q PE ++D++ILGASGFTGKYVVREALK PSS P+KSLALAGRNPTR+ Q+L+WA+
Sbjct: 4 TQKPEPVYDMVILGASGFTGKYVVREALKFLQTPSSSPLKSLALAGRNPTRLTQSLEWAA 63
Query: 63 -----PSHSLSIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDY 117
PS S+ ILTADT+DP SL RLC+QTKL+LNCVGP+R+HGDPV +AC SGCDY
Sbjct: 64 RPNPPPS---SVAILTADTSDPDSLRRLCTQTKLILNCVGPFRIHGDPVVSACADSGCDY 120
Query: 118 LDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWIPPAVPNQIE 177
LDISGEPEFMERMEA YH++A ETGSL+VSACGFDSIPAELG++FN++QW+ P+VPNQIE
Sbjct: 121 LDISGEPEFMERMEANYHDRAEETGSLIVSACGFDSIPAELGLLFNAKQWVSPSVPNQIE 180
Query: 178 AYVSLESDKRIVGNFGTYESAVLGVANAQELQKLRRSRPRRARPVIPGPAPLRGPLVESQ 237
AY+SLESDK+I GNFGTYESAVLGVANA++L++LRRSRPRR RP I GP P +GP +E+Q
Sbjct: 181 AYLSLESDKKIAGNFGTYESAVLGVANAEKLKELRRSRPRRPRPTICGP-PAKGPTLENQ 239
Query: 238 KRIGLWAIKLPSADATVVRRTLSILTENPHGLPGANESPEQREKREAFWSTVKPAHFGVK 297
K IGLWA+KLPSADA VVRRTL+ LTE PHGLPG NESPEQ +KREAFWS++KPAHFGVK
Sbjct: 240 KTIGLWALKLPSADAVVVRRTLTTLTEKPHGLPGINESPEQIQKREAFWSSIKPAHFGVK 299
Query: 298 LGSKSLLDIFRFIILGISIGLLSGLSFGRWLLLKFPSIFSLGWFRKRGPSEDEVESASFK 357
+ SKSL IFR++ LG+S+GLLS SFGRWLLLKFPS+FSLGWF+K+GPSE+EVESA+FK
Sbjct: 300 ITSKSLFGIFRYVTLGVSLGLLSKFSFGRWLLLKFPSVFSLGWFQKKGPSEEEVESATFK 359
Query: 358 MWFIGHGFSDSSLVSQGNAKPDMEIITRVTGPEIGYIATPIILMQCALIVLSQREILPKG 417
MWFIG G+S+ SL SQG KPD+EIITR++GPEIGYI TPI L+QC LIVL QRE L KG
Sbjct: 360 MWFIGRGYSEESLASQGETKPDLEIITRISGPEIGYITTPITLVQCGLIVLGQRESLVKG 419
Query: 418 GVFPPGIVFGATELQQRLQENGISFDVISK 447
GV+ PGIVFG+T++QQRL++NGISF++ISK
Sbjct: 420 GVYTPGIVFGSTDIQQRLEDNGISFELISK 449
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225452928|ref|XP_002284146.1| PREDICTED: probable mitochondrial saccharopine dehydrogenase At5g39410-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 669 bits (1727), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/451 (75%), Positives = 394/451 (87%), Gaps = 3/451 (0%)
Query: 1 MQAQSQIPEL-FDVIILGASGFTGKYVVREALKLFNFPSS-PIKSLALAGRNPTRVKQAL 58
M+ + Q P++ +D+IILGASGFTGKYVVREALK F+ SS P+K+LALAGRNP+++ QAL
Sbjct: 1 MEGEEQSPKIIYDIIILGASGFTGKYVVREALKFFDASSSSPLKTLALAGRNPSKLAQAL 60
Query: 59 QWAS-PSHSLSIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDY 117
+WA+ P+ +IPILTADTTDPPSL RLCSQ +L+LNCVGP+RL+G+PV AACV SGCDY
Sbjct: 61 EWAAHPNPPPAIPILTADTTDPPSLRRLCSQARLILNCVGPFRLYGEPVVAACVESGCDY 120
Query: 118 LDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWIPPAVPNQIE 177
LDI GEPEFMERME YHEKA E GSL+VSACGFDS+PAELG+MFNSRQW+ PA PN++E
Sbjct: 121 LDICGEPEFMERMEVAYHEKASEKGSLVVSACGFDSVPAELGLMFNSRQWVSPAAPNRVE 180
Query: 178 AYVSLESDKRIVGNFGTYESAVLGVANAQELQKLRRSRPRRARPVIPGPAPLRGPLVESQ 237
AYVSLES+KR+VGN GTYESAVLGVANA +LQ+ RRSRPRRARPVIPGP P +GP +E Q
Sbjct: 181 AYVSLESEKRVVGNMGTYESAVLGVANAGKLQEFRRSRPRRARPVIPGPPPPKGPTIEHQ 240
Query: 238 KRIGLWAIKLPSADATVVRRTLSILTENPHGLPGANESPEQREKREAFWSTVKPAHFGVK 297
K+IG+WA+KLPSAD+ VVRRTLSILTENP GLPG NES EQ K+EAFWSTVKPAHFGVK
Sbjct: 241 KQIGVWAVKLPSADSIVVRRTLSILTENPRGLPGVNESSEQIAKKEAFWSTVKPAHFGVK 300
Query: 298 LGSKSLLDIFRFIILGISIGLLSGLSFGRWLLLKFPSIFSLGWFRKRGPSEDEVESASFK 357
+ SKSLL IFR I +GI IG+ +FGRWLLLKFPS+FSLGWFRK+GPSEDEV SASFK
Sbjct: 301 ISSKSLLGIFRIITVGIFIGVFGKTAFGRWLLLKFPSVFSLGWFRKKGPSEDEVRSASFK 360
Query: 358 MWFIGHGFSDSSLVSQGNAKPDMEIITRVTGPEIGYIATPIILMQCALIVLSQREILPKG 417
MWF+GHGFSD L+S+GN KPD EIITRV GPEIGY+ TPIIL+QC LIVLSQR+ LPKG
Sbjct: 361 MWFVGHGFSDCRLLSEGNMKPDSEIITRVMGPEIGYLTTPIILLQCTLIVLSQRDNLPKG 420
Query: 418 GVFPPGIVFGATELQQRLQENGISFDVISKS 448
GVFPPGIVFG T+LQQRLQENGISFDV+ ++
Sbjct: 421 GVFPPGIVFGHTDLQQRLQENGISFDVVLRN 451
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356523590|ref|XP_003530420.1| PREDICTED: probable mitochondrial saccharopine dehydrogenase At5g39410-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 661 bits (1705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/441 (73%), Positives = 384/441 (87%), Gaps = 1/441 (0%)
Query: 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWAS-PSHSLSI 69
FD+IILGASGFTGKYV+REALK N PSSP+KS+A+AGR+P ++ QALQWAS P+ S+
Sbjct: 10 FDLIILGASGFTGKYVLREALKFLNTPSSPLKSIAIAGRSPQKLTQALQWASRPNPPPSL 69
Query: 70 PILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMER 129
PILTADT DP SL LC++T LLLNCVGP+RLHG+PV AAC +GCDYLDISGEPEFMER
Sbjct: 70 PILTADTADPSSLRSLCARTGLLLNCVGPFRLHGEPVVAACAAAGCDYLDISGEPEFMER 129
Query: 130 MEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWIPPAVPNQIEAYVSLESDKRIV 189
+EA +HE+AVETG+L+VSACGFDS+PAELGVMFNSRQW+ PA PN++EAYV+LES+KRIV
Sbjct: 130 VEAAHHERAVETGALVVSACGFDSVPAELGVMFNSRQWMGPAAPNRVEAYVALESEKRIV 189
Query: 190 GNFGTYESAVLGVANAQELQKLRRSRPRRARPVIPGPAPLRGPLVESQKRIGLWAIKLPS 249
GNF TYESAVLGVANA +LQ+LRRSRPR+ RP IPGP +G +E+ K+IGLWA+KLPS
Sbjct: 190 GNFATYESAVLGVANAHQLQQLRRSRPRKPRPQIPGPPTSKGETIENNKKIGLWAVKLPS 249
Query: 250 ADATVVRRTLSILTENPHGLPGANESPEQREKREAFWSTVKPAHFGVKLGSKSLLDIFRF 309
AD+ VVRRTL ILTEN HGLPG NES E EKREAFWS+VKPAHFGVK+GSKS L I R
Sbjct: 250 ADSIVVRRTLGILTENLHGLPGLNESAETVEKREAFWSSVKPAHFGVKIGSKSFLGILRI 309
Query: 310 IILGISIGLLSGLSFGRWLLLKFPSIFSLGWFRKRGPSEDEVESASFKMWFIGHGFSDSS 369
I++G+ IGL + FGR LLLKFP IFSLGWFRK GPSE+EVESASFKMWF+GHG+SD S
Sbjct: 310 IMVGVFIGLFGSIGFGRQLLLKFPEIFSLGWFRKNGPSEEEVESASFKMWFVGHGYSDGS 369
Query: 370 LVSQGNAKPDMEIITRVTGPEIGYIATPIILMQCALIVLSQREILPKGGVFPPGIVFGAT 429
+ SQGN KPDMEI+TRV GPE+GY+ TPIIL+QCAL++L QR+ LPKGGV+PPGI+FG T
Sbjct: 370 IASQGNTKPDMEIVTRVMGPEVGYLTTPIILIQCALVLLCQRDNLPKGGVYPPGIIFGPT 429
Query: 430 ELQQRLQENGISFDVISKSSL 450
+LQ+RLQ+NGISFDVISKS++
Sbjct: 430 DLQERLQQNGISFDVISKSTI 450
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357502067|ref|XP_003621322.1| hypothetical protein MTR_7g011890 [Medicago truncatula] gi|355496337|gb|AES77540.1| hypothetical protein MTR_7g011890 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 658 bits (1697), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/441 (73%), Positives = 381/441 (86%), Gaps = 1/441 (0%)
Query: 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWAS-PSHSLSI 69
FD+IILGASGFTGKYV++EALK N SSP+ S+A+AGR+PT++ Q LQWAS P+ S+
Sbjct: 8 FDLIILGASGFTGKYVLKEALKFLNTSSSPLTSIAIAGRSPTKLAQTLQWASKPNPPPSL 67
Query: 70 PILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMER 129
PIL ADTTDP SL LCSQT L+LNCVGP+R HG+PV AAC +GCDYLDI GEPEFME+
Sbjct: 68 PILHADTTDPSSLRSLCSQTHLILNCVGPFRHHGEPVVAACTDTGCDYLDICGEPEFMEK 127
Query: 130 MEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWIPPAVPNQIEAYVSLESDKRIV 189
EA YH++AVETGSL+VSACGFDS+PAELG++FNS QW+ AV N++EAYV LES+KR+V
Sbjct: 128 TEASYHQRAVETGSLVVSACGFDSVPAELGLLFNSVQWVGEAVVNRVEAYVGLESEKRMV 187
Query: 190 GNFGTYESAVLGVANAQELQKLRRSRPRRARPVIPGPAPLRGPLVESQKRIGLWAIKLPS 249
GNF TYESAVLGVANA L K RRSRPRR RP IPGP+P +G +E QK+IGLWA+ LPS
Sbjct: 188 GNFATYESAVLGVANASNLHKFRRSRPRRPRPQIPGPSPTKGDTIEHQKKIGLWAVVLPS 247
Query: 250 ADATVVRRTLSILTENPHGLPGANESPEQREKREAFWSTVKPAHFGVKLGSKSLLDIFRF 309
ADA+VVRRTLS LTENPHGLPG++ESPE KREAFWS+VKPAHFGVK+GSKSLL I R
Sbjct: 248 ADASVVRRTLSTLTENPHGLPGSDESPEMVVKREAFWSSVKPAHFGVKIGSKSLLGILRI 307
Query: 310 IILGISIGLLSGLSFGRWLLLKFPSIFSLGWFRKRGPSEDEVESASFKMWFIGHGFSDSS 369
I++GI IGL SFGRWLLLKFPS+FSLGWFRK GP+E+EVESASFKMWF+G GFS+ S
Sbjct: 308 IMVGIFIGLFGNTSFGRWLLLKFPSLFSLGWFRKNGPAEEEVESASFKMWFVGRGFSNES 367
Query: 370 LVSQGNAKPDMEIITRVTGPEIGYIATPIILMQCALIVLSQREILPKGGVFPPGIVFGAT 429
L SQGN KPDMEIITR+TGPEIGY+ TPII++QCALI+LSQR+ LPKGGV+PPGIVFG T
Sbjct: 368 LASQGNTKPDMEIITRITGPEIGYVTTPIIIVQCALILLSQRKNLPKGGVYPPGIVFGHT 427
Query: 430 ELQQRLQENGISFDVISKSSL 450
+LQQRLQ+NGISFDVISKS++
Sbjct: 428 DLQQRLQQNGISFDVISKSTI 448
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449437814|ref|XP_004136685.1| PREDICTED: probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 619 bits (1596), Expect = e-174, Method: Compositional matrix adjust.
Identities = 311/440 (70%), Positives = 374/440 (85%), Gaps = 4/440 (0%)
Query: 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLS-I 69
+D+IILGA+GFTGKYVVREAL+ N PSSP+KS ALAGRN T++ Q LQWA+ HS I
Sbjct: 6 YDLIILGATGFTGKYVVREALRFLN-PSSPLKSFALAGRNLTKLTQTLQWAAHPHSPPPI 64
Query: 70 PILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMER 129
P+L AD DP S+HRLC+QTKL+LNCVGP+R +G+PV AACV +GCDYLDI GEPEFME+
Sbjct: 65 PLLIADIADPQSIHRLCTQTKLILNCVGPFRRYGEPVVAACVETGCDYLDICGEPEFMEK 124
Query: 130 MEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWIPPAVPNQIEAYVSLESDKRIV 189
MEA YHE+AV++G+L+VSACGFDS+PAELG+MFNSRQW+ PN+IEAY+SLES K+IV
Sbjct: 125 MEANYHERAVQSGALVVSACGFDSVPAELGLMFNSRQWVGQTAPNRIEAYLSLESSKKIV 184
Query: 190 GNFGTYESAVLGVANAQELQKLRRSRPRRARPVIPGPAPLRGPLVESQKRIGLWAIKLPS 249
GNFGT+ESAVLGVANA +L KLRRSRPR+ RP IPGP P +GP +E +K IGLW+++LPS
Sbjct: 185 GNFGTFESAVLGVANADQLLKLRRSRPRKPRPKIPGPPPPKGPTIEHKKEIGLWSVRLPS 244
Query: 250 ADATVVRRTLSILTENPHGLPGANESPEQREKREAFWSTVKPAHFGVKLGSKSLLDIFRF 309
AD+TVVRRTLS L ENP GLPG NES + E+R+ FWS+VKPAHFGVK+G+KSL+ I R
Sbjct: 245 ADSTVVRRTLSTLVENPQGLPGVNESAYEIEQRKTFWSSVKPAHFGVKIGTKSLIGILRI 304
Query: 310 IILGISIGLLSGLSFGRWLLLKFPSIFSLGWFRKRGPSEDEVESASFKMWFIGHGFSDSS 369
I +G+ IGLL S GRWLLL FPS+FSLGWFRK+GPSE+EV SASFKMWF+GHGF S+
Sbjct: 305 IAVGMFIGLLGKTSLGRWLLLTFPSVFSLGWFRKKGPSEEEVNSASFKMWFVGHGFRSSN 364
Query: 370 LVSQGNAKPDMEIITRVTGPEIGYIATPIILMQCALIVLSQREILPKGGVFPPGIVFGAT 429
++ N +P+MEI+TRV GPEIGY+ TPIIL+QCALIVLS+RE LPKGGV PGIVFG T
Sbjct: 365 --NEANVEPEMEIVTRVMGPEIGYLTTPIILVQCALIVLSRREALPKGGVLTPGIVFGPT 422
Query: 430 ELQQRLQENGISFDVISKSS 449
+LQQRLQENGISFDVISK++
Sbjct: 423 DLQQRLQENGISFDVISKNA 442
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356551032|ref|XP_003543883.1| PREDICTED: probable mitochondrial saccharopine dehydrogenase At5g39410-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust.
Identities = 289/441 (65%), Positives = 360/441 (81%), Gaps = 7/441 (1%)
Query: 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIP 70
FDV+ILGASGFTGK V++EALK N S+ SLA+AGR+P+++ Q L+WA+ +
Sbjct: 8 FDVVILGASGFTGKQVLKEALKFLN--SNHFTSLAIAGRDPSKLAQTLKWAAQPNPPPQI 65
Query: 71 I-LTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMER 129
L ADT DPPSL LC QT+LLLNCVGP+R HG+PV AACV GCDYLDI+GE EFMER
Sbjct: 66 PILAADTADPPSLRSLCDQTRLLLNCVGPFRRHGEPVVAACVACGCDYLDITGESEFMER 125
Query: 130 MEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWIPPAVPNQIEAYVSLESDKRIV 189
+E YH +A + GSL+VSACGFDS+PAE+G +F+SRQW+ PA PN++ AY+SLESDKRIV
Sbjct: 126 VEREYHAEATKKGSLVVSACGFDSVPAEMGFLFHSRQWVGPARPNRVGAYLSLESDKRIV 185
Query: 190 GNFGTYESAVLGVANAQELQKLRRSRPRRARPVIPGPAPLRGPLVESQKRIGLWAIKLPS 249
GNFGT+ESAV+ V ++L+++ RSR R P IPGP P +G ++E QK+IGLW + LPS
Sbjct: 186 GNFGTFESAVMAV---KDLKEMERSRVTRVIPEIPGPPP-KGEIIEHQKKIGLWGVTLPS 241
Query: 250 ADATVVRRTLSILTENPHGLPGANESPEQREKREAFWSTVKPAHFGVKLGSKSLLDIFRF 309
ADAT+V RTLS LTE+PHGLPG NE+ E EKR+A+W++VKPAHFGVK+GSKSLL +F F
Sbjct: 242 ADATLVGRTLSTLTESPHGLPGLNENAEMVEKRKAYWTSVKPAHFGVKIGSKSLLHVFGF 301
Query: 310 IILGISIGLLSGLSFGRWLLLKFPSIFSLGWFRKRGPSEDEVESASFKMWFIGHGFSDSS 369
I++GI IG+L SFGRWLLLK+PSIF+ G F K GPSE+E+ SASFKMWF+GHGFS+ S
Sbjct: 302 ILIGIIIGVLGRTSFGRWLLLKYPSIFTFGGFSKNGPSEEEIASASFKMWFVGHGFSNES 361
Query: 370 LVSQGNAKPDMEIITRVTGPEIGYIATPIILMQCALIVLSQREILPKGGVFPPGIVFGAT 429
L +QGN KPDMEIITRV GPE+GY+ TPII++QCAL++ QR+ LPKGGV+ PGIVFG T
Sbjct: 362 LAAQGNTKPDMEIITRVMGPEMGYVTTPIIMVQCALVLHGQRKNLPKGGVYTPGIVFGPT 421
Query: 430 ELQQRLQENGISFDVISKSSL 450
+LQ+RLQ+NGISFDVISKSS+
Sbjct: 422 DLQERLQQNGISFDVISKSSI 442
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 452 | ||||||
| TAIR|locus:2175723 | 454 | AT5G39410 [Arabidopsis thalian | 0.975 | 0.971 | 0.685 | 4.2e-166 | |
| MGI|MGI:1924486 | 429 | Sccpdh "saccharopine dehydroge | 0.579 | 0.610 | 0.344 | 4.7e-68 | |
| RGD|1311440 | 429 | Sccpdh "saccharopine dehydroge | 0.579 | 0.610 | 0.347 | 1.1e-66 | |
| UNIPROTKB|Q6AY30 | 429 | Sccpdh "Saccharopine dehydroge | 0.579 | 0.610 | 0.347 | 1.1e-66 | |
| UNIPROTKB|F1MX05 | 429 | SCCPDH "Saccharopine dehydroge | 0.570 | 0.601 | 0.344 | 3.7e-66 | |
| UNIPROTKB|Q8NBX0 | 429 | SCCPDH "Saccharopine dehydroge | 0.570 | 0.601 | 0.337 | 3.7e-66 | |
| UNIPROTKB|F1S8P1 | 429 | SCCPDH "Uncharacterized protei | 0.570 | 0.601 | 0.351 | 2e-65 | |
| UNIPROTKB|Q3T067 | 429 | SCCPDH "Saccharopine dehydroge | 0.570 | 0.601 | 0.344 | 2.6e-65 | |
| ZFIN|ZDB-GENE-041010-211 | 429 | sccpdhb "saccharopine dehydrog | 0.586 | 0.617 | 0.316 | 1.4e-64 | |
| ZFIN|ZDB-GENE-080212-12 | 466 | zgc:174379 "zgc:174379" [Danio | 0.586 | 0.568 | 0.351 | 3.7e-62 |
| TAIR|locus:2175723 AT5G39410 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1616 (573.9 bits), Expect = 4.2e-166, P = 4.2e-166
Identities = 307/448 (68%), Positives = 367/448 (81%)
Query: 5 SQIPE-LFDVIILGASGFTGKYVVREALKLFNFPSS-PIKSLALAGRNPTRVKQALQWAS 62
+Q PE ++D++ILGASGFTGKYVVREALK PSS P+KSLALAGRNPTR+ Q+L+WA+
Sbjct: 4 TQKPEPVYDMVILGASGFTGKYVVREALKFLQTPSSSPLKSLALAGRNPTRLTQSLEWAA 63
Query: 63 ---PSHSLSIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLD 119
P S S+ ILTADT+DP SL RLC+QTKL+LNCVGP+R+HGDPV +AC SGCDYLD
Sbjct: 64 RPNPPPS-SVAILTADTSDPDSLRRLCTQTKLILNCVGPFRIHGDPVVSACADSGCDYLD 122
Query: 120 ISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWIPPAVPNQIEAY 179
ISGEPEFMERMEA YH++A ETGSL+VSACGFDSIPAELG++FN++QW+ P+VPNQIEAY
Sbjct: 123 ISGEPEFMERMEANYHDRAEETGSLIVSACGFDSIPAELGLLFNAKQWVSPSVPNQIEAY 182
Query: 180 VSLESDKRIVGNFGTYESAVLGVANAQELQKLXXXXXXXXXXVIPGPAPLRGPLVESQKR 239
+SLESDK+I GNFGTYESAVLGVANA++L++L I GP P +GP +E+QK
Sbjct: 183 LSLESDKKIAGNFGTYESAVLGVANAEKLKELRRSRPRRPRPTICGP-PAKGPTLENQKT 241
Query: 240 IGLWAIKLPSADATVVRRTLSILTENPHGLPGANESPEQREKREAFWSTVKPAHFGVKLG 299
IGLWA+KLPSADA VVRRTL+ LTE PHGLPG NESPEQ +KREAFWS++KPAHFGVK+
Sbjct: 242 IGLWALKLPSADAVVVRRTLTTLTEKPHGLPGINESPEQIQKREAFWSSIKPAHFGVKIT 301
Query: 300 SKSLLDXXXXXXXXXXXXXXXXXXXXXWLLLKFPSIFSLGWFRKRGPSEDEVESASFKMW 359
SKSL WLLLKFPS+FSLGWF+K+GPSE+EVESA+FKMW
Sbjct: 302 SKSLFGIFRYVTLGVSLGLLSKFSFGRWLLLKFPSVFSLGWFQKKGPSEEEVESATFKMW 361
Query: 360 FIGHGFSDSSLVSQGNAKPDMEIITRVTGPEIGYIATPIILMQCALIVLSQREILPKGGV 419
FIG G+S+ SL SQG KPD+EIITR++GPEIGYI TPI L+QC LIVL QRE L KGGV
Sbjct: 362 FIGRGYSEESLASQGETKPDLEIITRISGPEIGYITTPITLVQCGLIVLGQRESLVKGGV 421
Query: 420 FPPGIVFGATELQQRLQENGISFDVISK 447
+ PGIVFG+T++QQRL++NGISF++ISK
Sbjct: 422 YTPGIVFGSTDIQQRLEDNGISFELISK 449
|
|
| MGI|MGI:1924486 Sccpdh "saccharopine dehydrogenase (putative)" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 413 (150.4 bits), Expect = 4.7e-68, Sum P(2) = 4.7e-68
Identities = 95/276 (34%), Positives = 155/276 (56%)
Query: 3 AQSQIPELFDVIILGASGFTGKYVVREALK--LFNFPSSPIKSLALAGRNPTRVKQALQW 60
A Q P F +++ GASGFTG++V E + + + SS + A+AGR+ +++Q L+
Sbjct: 2 ATEQRP--FHLVVFGASGFTGQFVTEEVAREQIASEQSSRLP-WAVAGRSKEKLQQVLEK 58
Query: 61 AS-----PSHSLSIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGC 115
A+ PS S + ++ D ++P SL + Q KL+LNCVGPYR +G+PV AC+ +G
Sbjct: 59 AAQKLGRPSLSSEVGVIICDISNPASLDEMAKQAKLVLNCVGPYRFYGEPVVKACIENGT 118
Query: 116 DYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWIPPAVPNQ 175
+DI GEP+F+E M A+YHEKA E G ++ + GFDSIPA+LGV++ Q
Sbjct: 119 SCIDICGEPQFLELMHAKYHEKAAEKGVYIIGSSGFDSIPADLGVLYTRNQM--NGTLTA 176
Query: 176 IEAYVSLESDKR-IVGNFGTYESAVLGVANAQELQKLXXXXXXXXXXVIPGPAPLRGPLV 234
+E+++++ + + + GT++SA+ G + L+KL ++ R P V
Sbjct: 177 VESFLTINTGPEGLCIHDGTWKSAIYGFGDKGSLRKLRSVSCLKPVPIVGTKLKRRWP-V 235
Query: 235 ESQKRIGLWAIKLPSADATVVRRTLSILTENPHGLP 270
+ + ++I +D +VV+RT L EN P
Sbjct: 236 SYCRELNSYSIPFLGSDISVVKRTQRYLHENLEDSP 271
|
|
| RGD|1311440 Sccpdh "saccharopine dehydrogenase (putative)" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 401 (146.2 bits), Expect = 1.1e-66, Sum P(2) = 1.1e-66
Identities = 96/276 (34%), Positives = 153/276 (55%)
Query: 3 AQSQIPELFDVIILGASGFTGKYVVREALK--LFNFPSSPIKSLALAGRNPTRVKQALQW 60
A Q P F +++ GASGFTG++V E + + + SS + A+AGR+ +++Q L+
Sbjct: 2 ATEQRP--FQLVVFGASGFTGQFVTEEVAREQMASEQSSRLP-WAVAGRSKEKLQQVLEK 58
Query: 61 ASPS---HSLS--IPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGC 115
A+ +LS + I+ D ++P SL + + L+LNCVGPYR +G+PV AC+ +G
Sbjct: 59 AAQKLGRATLSSEVGIIICDISNPASLDEMAKKATLVLNCVGPYRFYGEPVVKACIENGT 118
Query: 116 DYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWIPPAVPNQ 175
+DI GEP+F+E M +YHEKA E G ++ + GFDSIPA+LGV++ Q
Sbjct: 119 SCIDICGEPQFLELMHVKYHEKAAEKGVYIIGSSGFDSIPADLGVLYTRNQM--NGTLTA 176
Query: 176 IEAYVSLESDKR-IVGNFGTYESAVLGVANAQELQKLXXXXXXXXXXVIPGPAPLRGPLV 234
+E+++++ S + + GT++SA+ G + L+KL VI R P V
Sbjct: 177 VESFLTINSGPEGLCIHDGTWKSAIYGFGDKGSLRKLRSVSNLKPVPVIGSKLKRRWP-V 235
Query: 235 ESQKRIGLWAIKLPSADATVVRRTLSILTENPHGLP 270
+ + +AI +D +VV+RT L EN P
Sbjct: 236 SYCRELNSYAIPFLGSDMSVVKRTQRYLHENLEDSP 271
|
|
| UNIPROTKB|Q6AY30 Sccpdh "Saccharopine dehydrogenase-like oxidoreductase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 401 (146.2 bits), Expect = 1.1e-66, Sum P(2) = 1.1e-66
Identities = 96/276 (34%), Positives = 153/276 (55%)
Query: 3 AQSQIPELFDVIILGASGFTGKYVVREALK--LFNFPSSPIKSLALAGRNPTRVKQALQW 60
A Q P F +++ GASGFTG++V E + + + SS + A+AGR+ +++Q L+
Sbjct: 2 ATEQRP--FQLVVFGASGFTGQFVTEEVAREQMASEQSSRLP-WAVAGRSKEKLQQVLEK 58
Query: 61 ASPS---HSLS--IPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGC 115
A+ +LS + I+ D ++P SL + + L+LNCVGPYR +G+PV AC+ +G
Sbjct: 59 AAQKLGRATLSSEVGIIICDISNPASLDEMAKKATLVLNCVGPYRFYGEPVVKACIENGT 118
Query: 116 DYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWIPPAVPNQ 175
+DI GEP+F+E M +YHEKA E G ++ + GFDSIPA+LGV++ Q
Sbjct: 119 SCIDICGEPQFLELMHVKYHEKAAEKGVYIIGSSGFDSIPADLGVLYTRNQM--NGTLTA 176
Query: 176 IEAYVSLESDKR-IVGNFGTYESAVLGVANAQELQKLXXXXXXXXXXVIPGPAPLRGPLV 234
+E+++++ S + + GT++SA+ G + L+KL VI R P V
Sbjct: 177 VESFLTINSGPEGLCIHDGTWKSAIYGFGDKGSLRKLRSVSNLKPVPVIGSKLKRRWP-V 235
Query: 235 ESQKRIGLWAIKLPSADATVVRRTLSILTENPHGLP 270
+ + +AI +D +VV+RT L EN P
Sbjct: 236 SYCRELNSYAIPFLGSDMSVVKRTQRYLHENLEDSP 271
|
|
| UNIPROTKB|F1MX05 SCCPDH "Saccharopine dehydrogenase-like oxidoreductase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 396 (144.5 bits), Expect = 3.7e-66, Sum P(2) = 3.7e-66
Identities = 93/270 (34%), Positives = 149/270 (55%)
Query: 3 AQSQIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIK-SLALAGRNPTRVKQALQWA 61
A Q P F +++ GASGFTG++V E + P A+AGR+ ++ + L+ A
Sbjct: 2 ATQQRP--FHLVVFGASGFTGQFVTEEVAREQVSPERTSHLPWAVAGRSREKLLRVLERA 59
Query: 62 S-----PSHSLSIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCD 116
+ P+ S + I+ D T+P SL + Q ++LNCVGPYR +G+PV AC+ +G
Sbjct: 60 AMKLGRPTLSSEVGIIICDITNPASLDEMAKQATVVLNCVGPYRFYGEPVIKACIENGTS 119
Query: 117 YLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWIPPAVPNQI 176
+DISGEP+F+E M +YHEKA E G ++ + GFDSIPA+LGV++ + +
Sbjct: 120 CIDISGEPQFLELMYWKYHEKAAEKGVYIIGSSGFDSIPADLGVIYTRNKM--NGTLTAV 177
Query: 177 EAYVSLESDKR-IVGNFGTYESAVLGVANAQELQKLXXXXXXXXXXVIPGPAPLRGPLVE 235
E+++++ S + + GT++SAV G + L+KL ++ GP R +
Sbjct: 178 ESFLTISSGPEGLCVHDGTWKSAVYGFGDKSNLKKLRNESDMKPVPIV-GPKLKRRWPIS 236
Query: 236 SQKRIGLWAIKLPSADATVVRRTLSILTEN 265
+ + ++I AD +VV+RT L EN
Sbjct: 237 YCRELNSYSIPFLGADVSVVKRTQRYLHEN 266
|
|
| UNIPROTKB|Q8NBX0 SCCPDH "Saccharopine dehydrogenase-like oxidoreductase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 396 (144.5 bits), Expect = 3.7e-66, Sum P(2) = 3.7e-66
Identities = 91/270 (33%), Positives = 151/270 (55%)
Query: 3 AQSQIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIK-SLALAGRNPTRVKQALQWA 61
A Q P F +++ GASGFTG++V E + P + A+AGR+ ++++ L+ A
Sbjct: 2 ATEQRP--FHLVVFGASGFTGQFVTEEVAREQVDPERSSRLPWAVAGRSREKLQRVLEKA 59
Query: 62 S-----PSHSLSIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCD 116
+ P+ S + I+ D +P SL + Q ++LNCVGPYR +G+PV AC+ +G
Sbjct: 60 ALKLGRPTLSSEVGIIICDIANPASLDEMAKQATVVLNCVGPYRFYGEPVIKACIENGAS 119
Query: 117 YLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWIPPAVPNQI 176
+DISGEP+F+E M+ +YHEKA + G ++ + GFDSIPA+LGV++ + +
Sbjct: 120 CIDISGEPQFLELMQLKYHEKAADKGVYIIGSSGFDSIPADLGVIYTRNKM--NGTLTAV 177
Query: 177 EAYVSLESDKRIVG-NFGTYESAVLGVANAQELQKLXXXXXXXXXXVIPGPAPLRGPLVE 235
E+++++ S + + GT++SA+ G + L+KL +I R P+
Sbjct: 178 ESFLTIHSGPEGLSIHDGTWKSAIYGFGDQSNLRKLRNVSNLKPVPLIGPKLKRRWPISY 237
Query: 236 SQKRIGLWAIKLPSADATVVRRTLSILTEN 265
++ G ++I +D +VVRRT L EN
Sbjct: 238 CRELKG-YSIPFMGSDVSVVRRTQRYLYEN 266
|
|
| UNIPROTKB|F1S8P1 SCCPDH "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 390 (142.3 bits), Expect = 2.0e-65, Sum P(2) = 2.0e-65
Identities = 95/270 (35%), Positives = 149/270 (55%)
Query: 3 AQSQIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIK-SLALAGRNPTRVKQALQWA 61
A Q P F +++ GASGFTG++V E + P A+AGR ++++ L+ A
Sbjct: 2 ATQQRP--FHLVVFGASGFTGQFVTEEVAREQVSPERRTSLPWAVAGRCREKLQRVLERA 59
Query: 62 S-----PSHSLSIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCD 116
+ P+ + I+ D T+P SL + Q ++LNCVGPYR +G+PV AC+ +G
Sbjct: 60 AMKLGRPTLPSEVGIIICDITNPASLDEMAKQAAVVLNCVGPYRFYGEPVVRACIENGAS 119
Query: 117 YLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWIPPAVPNQI 176
+DI GEP+F+E + +YHEKA E G ++ + GFDSIPA++GV+F + + A +
Sbjct: 120 CIDICGEPQFLELIYWKYHEKAAEKGVYIIGSSGFDSIPADMGVIFTTNKM--NARLTAV 177
Query: 177 EAYVSLES-DKRIVGNFGTYESAVLGVANAQELQKLXXXXXXXXXXVIPGPAPLRGPLVE 235
++S S K + + GT++SAV G A+ +L+KL V+ GP R V
Sbjct: 178 VRFLSWHSGSKGLCIHDGTWKSAVYGFADKSQLKKLRNESHLKPVPVV-GPKLKRRWPVS 236
Query: 236 SQKRIGLWAIKLPSADATVVRRTLSILTEN 265
+ + ++I AD +VV+RT L EN
Sbjct: 237 YCRELNSYSIPFLGADVSVVKRTQRYLHEN 266
|
|
| UNIPROTKB|Q3T067 SCCPDH "Saccharopine dehydrogenase-like oxidoreductase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 396 (144.5 bits), Expect = 2.6e-65, Sum P(2) = 2.6e-65
Identities = 93/270 (34%), Positives = 149/270 (55%)
Query: 3 AQSQIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIK-SLALAGRNPTRVKQALQWA 61
A Q P F +++ GASGFTG++V E + P A+AGR+ ++ + L+ A
Sbjct: 2 ATQQRP--FHLVVFGASGFTGQFVTEEVAREQVSPERTSHLPWAVAGRSREKLLRVLERA 59
Query: 62 S-----PSHSLSIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCD 116
+ P+ S + I+ D T+P SL + Q ++LNCVGPYR +G+PV AC+ +G
Sbjct: 60 AMKLGRPTLSSEVGIIICDITNPASLDEMAKQATVVLNCVGPYRFYGEPVIKACIENGTS 119
Query: 117 YLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWIPPAVPNQI 176
+DISGEP+F+E M +YHEKA E G ++ + GFDSIPA+LGV++ + +
Sbjct: 120 CIDISGEPQFLELMYWKYHEKAAEKGVYIIGSSGFDSIPADLGVIYTRNKM--NGTLTAV 177
Query: 177 EAYVSLESDKR-IVGNFGTYESAVLGVANAQELQKLXXXXXXXXXXVIPGPAPLRGPLVE 235
E+++++ S + + GT++SAV G + L+KL ++ GP R +
Sbjct: 178 ESFLTISSGPEGLCVHDGTWKSAVYGFGDKSNLKKLRNESDMKPVPIV-GPKLKRRWPIS 236
Query: 236 SQKRIGLWAIKLPSADATVVRRTLSILTEN 265
+ + ++I AD +VV+RT L EN
Sbjct: 237 YCRELNSYSIPFLGADVSVVKRTQRYLHEN 266
|
|
| ZFIN|ZDB-GENE-041010-211 sccpdhb "saccharopine dehydrogenase b" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 396 (144.5 bits), Expect = 1.4e-64, Sum P(2) = 1.4e-64
Identities = 87/275 (31%), Positives = 151/275 (54%)
Query: 1 MQAQSQIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQW 60
++ S+ P + +I+LGASGFTG++VV E ++ A+AGR+ R+++ L
Sbjct: 4 LKTSSKRP--YHLIVLGASGFTGQFVVEEVARIIEEGPGGTLQWAVAGRSRHRLEKTLSQ 61
Query: 61 ASPSHSL----SIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCD 116
A+ + S S+ ++ AD + SL +C Q ++LNCVGPYR +G+PV AC+ +G
Sbjct: 62 AADALSKPELKSVEVIVADVAEAESLAIMCKQAVIVLNCVGPYRFYGEPVVKACIENGAH 121
Query: 117 YLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWIPPAVPNQI 176
+DI GEP+F+E ++ YH KA E G ++ +CGFDSIPA++G+++ + +
Sbjct: 122 CIDICGEPQFLEGIQLMYHSKAEENGVYVIGSCGFDSIPADMGIIYTRNHF--QGTLTAV 179
Query: 177 EAYVSLESDKRI-VGNFGTYESAVLGVANAQELQKLXXXXXXXXXXVIPGPAPLRGPLVE 235
E+++++ + + T++SA+ G A++ L+++ + RG +
Sbjct: 180 ESFLTISTGPEGGCAHDATWQSAIFGFADSGNLRRIRKKFGHKPLPAVGARIKKRGAVFF 239
Query: 236 SQKRIGLWAIKLPSADATVVRRTLSILTENPHGLP 270
S K I +AI +D +VVRRT + E P
Sbjct: 240 S-KEIEQYAIPFMGSDPSVVRRTQRFMHEEQKHSP 273
|
|
| ZFIN|ZDB-GENE-080212-12 zgc:174379 "zgc:174379" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 409 (149.0 bits), Expect = 3.7e-62, Sum P(2) = 3.7e-62
Identities = 98/279 (35%), Positives = 158/279 (56%)
Query: 1 MQAQSQIP-ELFDVIILGASGFTGKYVVREALKLFNF-PSSPIKSLALAGRNPTRVKQAL 58
M A S P + +II GASGFTG++VV E + + P+ +K A+AGR+ +++++ +
Sbjct: 1 MTAFSTSPGRPYHIIIFGASGFTGQFVVEEVSRCASEGPNGSLK-WAVAGRSKSKLEKVI 59
Query: 59 QWAS-----PSHSLSIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHS 113
+ AS P + I+ AD +D SL +C Q ++L+CVGPYR G+ V +CV +
Sbjct: 60 EQASANLSKPELKTEVDIIVADVSDQESLAAMCKQAVIVLSCVGPYRFFGESVVKSCVEN 119
Query: 114 GCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWIPPAVP 173
G LDISGEP+F+E M+ YH++A + G +V +CGFDSIPA++GV++ Q+
Sbjct: 120 GAHCLDISGEPQFLEGMQLNYHDQAADKGVYIVGSCGFDSIPADMGVIYTRDQF--KGTL 177
Query: 174 NQIEAYVSLESDKRIVG--NFGTYESAVLGVANAQELQKLXXXXXXXXXXVIPGPAPLRG 231
++++++L S G N GT++SA+ G+A+ +L+ L V+ GP R
Sbjct: 178 TAVDSFLTLGSGPE-GGCLNDGTWQSAIYGLADKGKLKTLRKKFGHKPLLVV-GPKIKRK 235
Query: 232 PLVESQKRIGLWAIKLPSADATVVRRTLSILTENPHGLP 270
L+ + +AI D +VV+RT L E + P
Sbjct: 236 GLLFYSSEVQQYAIPFMGTDPSVVKRTQRYLHEELNETP 274
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q3T067 | SCPDL_BOVIN | 1, ., -, ., -, ., - | 0.3481 | 0.9092 | 0.9580 | yes | no |
| Q6AY30 | SCPDL_RAT | 1, ., -, ., -, ., - | 0.3526 | 0.9159 | 0.9650 | yes | no |
| Q8NBX0 | SCPDL_HUMAN | 1, ., -, ., -, ., - | 0.3683 | 0.9159 | 0.9650 | yes | no |
| Q5R5C9 | SCPDL_PONAB | 1, ., -, ., -, ., - | 0.3616 | 0.9159 | 0.9650 | yes | no |
| Q8R127 | SCPDL_MOUSE | 1, ., -, ., -, ., - | 0.3616 | 0.9159 | 0.9650 | yes | no |
| Q8LGI2 | SCPDL_ARATH | 1, ., -, ., -, ., - | 0.7333 | 0.9712 | 0.9669 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 4th Layer | 2.5.1.44 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 452 | |||
| COG3268 | 382 | COG3268, COG3268, Uncharacterized conserved protei | 1e-45 | |
| pfam03435 | 380 | pfam03435, Saccharop_dh, Saccharopine dehydrogenas | 5e-17 | |
| COG1748 | 389 | COG1748, LYS9, Saccharopine dehydrogenase and rela | 6e-11 |
| >gnl|CDD|225807 COG3268, COG3268, Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Score = 162 bits (412), Expect = 1e-45
Identities = 105/445 (23%), Positives = 171/445 (38%), Gaps = 85/445 (19%)
Query: 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIP 70
+D+II GA+G+ G V + ALAGR+ ++ P +
Sbjct: 7 YDIIIYGATGYAGGLVAEYLA-------REGLTAALAGRSSAKLDALRASLGPEAA---- 55
Query: 71 ILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERM 130
P +L + S+T+++LNCVGPY +G+P+ AAC +G DY DI+GE F E
Sbjct: 56 --VFPLGVPAALEAMASRTQVVLNCVGPYTRYGEPLVAACAAAGTDYADITGEIMFFENS 113
Query: 131 EARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWIPPAVPNQIEAYVSLESDKRIVG 190
YH +A + G+ ++ CGFDSIP++LGV +Q A+P+ E L + +G
Sbjct: 114 IDLYHAQAADAGARIIPGCGFDSIPSDLGVYALLKQ----ALPDGTE---ELIATHLALG 166
Query: 191 NFGTYESAVLGVANAQELQKLRRSRP--RRARPVIPGPAPLRGPLVESQKRIGL------ 242
+F + A + E P R V RG ++ R G
Sbjct: 167 SFTGSGISGGTAATSVEGLATAGKDPEAGRLLRVPYALKKRRGAEIDFPSRRGRRLAPTL 226
Query: 243 -WAIKLPSADATVVRRTLSILTENPHGLPGANESPEQREKREAFWSTVKPAHFGVKLGSK 301
W + + T+V R+ ++ W P G
Sbjct: 227 PWGFVAAAFNTTIVPRSNALE----------------------VWIYAAPVLALAGRGIG 264
Query: 302 SLLDIF--RFIILGISIGLLSGLSFGRWLLLKFPSIFSLGWFRKRGPSEDEVESASFKMW 359
+LL + ++ + R L+L+ GP+E+ + +
Sbjct: 265 ALLPLLGSAYVRDLL-----------RGLVLRVVPK------PGTGPTEEAQARGRYTIE 307
Query: 360 FIGHGFSDSSLVSQGNAKPDMEIITRVTGPEIGYIATPIILMQCALIVLSQREIL-PKGG 418
+ + R+T Y +T ++L Q AL + R+ L GG
Sbjct: 308 GET---------TTATGERYT---ARITTDNDYY-STAVLLAQAALALALDRDKLSEPGG 354
Query: 419 VFPPGIVFGATELQQRLQENGISFD 443
V P GA +L +RL G++F
Sbjct: 355 VLTPAAALGA-DLVERLPGAGVTFG 378
|
Length = 382 |
| >gnl|CDD|217556 pfam03435, Saccharop_dh, Saccharopine dehydrogenase | Back alignment and domain information |
|---|
Score = 82.0 bits (203), Expect = 5e-17
Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 16/149 (10%)
Query: 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPIL 72
V+I+GA G G+ V + + + +A R+ + + A+P L +
Sbjct: 1 VLIIGA-GGVGQGVAPLLARHGD------LEITVADRSLEKAQAL---AAPKLGLRFIAI 50
Query: 73 TADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEA 132
D + +L L + L++N P+ L V AC+ +G Y+D S ++ +
Sbjct: 51 AVDADNYEALVALLKEGDLVINLAPPF-LSLT-VLKACIETGVHYVDTS----YLREAQL 104
Query: 133 RYHEKAVETGSLLVSACGFDSIPAELGVM 161
HEKA + G V CGFD L
Sbjct: 105 ALHEKAKDAGVTAVLGCGFDPGLVSLFAK 133
|
This family comprised of three structural domains that can not be separated in the linear sequence. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase. The saccharopine dehydrogenase can also function as a saccharopine reductase. Length = 380 |
| >gnl|CDD|224662 COG1748, LYS9, Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 63.5 bits (155), Expect = 6e-11
Identities = 43/198 (21%), Positives = 73/198 (36%), Gaps = 40/198 (20%)
Query: 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPI 71
++++GA G G V + + + + +A R+ + + + +
Sbjct: 3 KILVIGA-GGVGSVVAHKLAQ------NGDGEVTIADRSKEKCARIAE----LIGGKVEA 51
Query: 72 LTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERME 131
L D D +L L L++N P+ + AC+ +G DY+D S + E
Sbjct: 52 LQVDAADVDALVALIKDFDLVINAAPPF--VDLTILKACIKTGVDYVDTS----YYEEPP 105
Query: 132 ARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWIPPAVPNQIEAYVSLESDKRI--- 188
+ E+A + G V CGFD P + N + AY + E I
Sbjct: 106 WKLDEEAKKAGITAVLGCGFD-----------------PGITNVLAAYAAKELFDEIESI 148
Query: 189 ---VGNFGTYESAVLGVA 203
VG G + LG A
Sbjct: 149 DIYVGGLGEHGDNPLGYA 166
|
Length = 389 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 452 | |||
| KOG2733 | 423 | consensus Uncharacterized membrane protein [Functi | 100.0 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 100.0 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 99.92 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 99.75 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 99.55 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 99.37 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 99.36 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 99.32 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 99.29 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 99.26 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.21 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.17 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.16 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 99.16 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 99.15 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.14 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 99.13 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 99.13 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.12 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 99.12 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 99.12 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.1 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.09 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.08 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.07 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.07 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.07 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 99.06 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.06 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.05 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.05 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.05 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 99.05 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.04 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.04 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.04 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 99.04 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.04 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.04 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 99.03 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.03 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.03 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 99.03 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.03 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 99.03 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 99.03 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.03 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.03 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.03 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.02 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.02 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 99.02 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.02 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.02 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.01 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.01 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 99.01 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 99.01 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 99.01 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 99.01 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.0 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 99.0 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 98.99 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 98.99 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 98.99 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 98.99 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 98.99 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 98.99 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 98.99 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 98.98 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 98.98 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 98.98 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 98.98 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 98.98 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 98.97 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 98.97 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.97 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 98.97 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.97 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 98.97 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 98.97 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 98.97 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 98.97 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 98.97 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 98.97 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 98.97 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.97 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 98.96 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 98.96 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 98.96 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 98.96 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 98.96 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 98.96 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 98.96 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 98.95 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 98.95 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 98.95 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 98.95 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 98.94 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 98.94 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 98.94 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 98.94 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 98.94 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 98.94 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 98.94 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 98.93 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 98.93 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.93 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.92 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 98.92 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 98.92 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 98.92 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 98.91 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 98.91 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 98.91 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 98.91 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 98.91 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 98.91 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 98.91 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 98.91 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 98.91 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 98.9 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.9 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 98.9 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 98.9 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 98.9 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 98.89 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 98.89 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 98.89 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 98.88 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 98.88 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 98.88 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 98.88 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 98.88 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 98.88 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 98.87 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 98.87 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 98.87 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 98.87 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 98.87 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 98.87 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 98.86 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 98.86 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 98.86 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 98.85 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 98.85 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 98.85 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 98.85 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 98.85 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 98.85 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 98.85 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.84 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 98.84 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 98.84 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 98.84 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 98.84 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 98.83 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 98.83 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 98.83 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 98.83 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 98.83 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 98.83 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.83 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.83 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.83 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 98.83 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 98.83 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 98.82 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 98.82 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 98.82 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 98.82 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 98.82 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.82 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 98.81 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 98.81 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 98.81 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 98.81 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 98.81 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.8 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 98.8 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 98.79 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 98.79 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 98.79 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 98.79 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.79 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 98.79 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 98.79 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.79 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 98.78 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 98.78 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 98.78 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 98.78 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 98.77 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.77 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 98.77 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 98.77 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 98.76 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 98.76 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 98.76 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 98.76 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.76 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 98.76 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 98.76 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 98.76 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.75 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 98.75 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 98.75 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.75 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 98.74 | |
| KOG0172 | 445 | consensus Lysine-ketoglutarate reductase/saccharop | 98.74 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 98.74 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 98.74 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 98.74 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 98.74 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 98.73 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 98.73 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 98.73 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 98.73 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 98.73 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.72 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 98.72 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 98.71 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.71 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 98.7 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 98.7 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 98.7 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 98.7 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.69 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 98.69 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 98.69 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.68 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 98.68 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 98.68 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 98.67 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 98.67 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 98.67 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 98.67 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 98.65 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 98.65 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 98.64 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 98.64 | |
| PLN00015 | 308 | protochlorophyllide reductase | 98.64 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.64 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 98.63 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 98.63 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 98.63 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 98.62 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 98.61 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 98.61 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 98.6 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 98.6 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.57 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 98.56 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 98.55 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 98.54 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.52 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 98.52 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 98.5 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 98.5 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 98.49 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 98.48 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 98.48 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 98.48 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 98.48 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 98.48 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 98.47 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 98.46 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 98.46 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 98.46 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.44 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 98.41 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 98.39 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 98.38 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 98.37 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 98.36 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 98.36 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 98.31 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 98.31 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 98.31 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 98.3 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 98.3 | |
| PRK00048 | 257 | dihydrodipicolinate reductase; Provisional | 98.28 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 98.27 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 98.25 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 98.23 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 98.23 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 98.2 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 98.11 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 98.09 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 98.07 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 97.98 | |
| PF01118 | 121 | Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi | 97.98 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 97.97 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 97.97 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 97.96 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 97.95 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 97.93 | |
| KOG1478 | 341 | consensus 3-keto sterol reductase [Lipid transport | 97.92 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 97.89 | |
| PLN02968 | 381 | Probable N-acetyl-gamma-glutamyl-phosphate reducta | 97.85 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 97.84 | |
| PRK14027 | 283 | quinate/shikimate dehydrogenase; Provisional | 97.83 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 97.83 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 97.81 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 97.8 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 97.8 | |
| COG0169 | 283 | AroE Shikimate 5-dehydrogenase [Amino acid transpo | 97.78 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.74 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 97.72 | |
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 97.71 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 97.7 | |
| PRK00436 | 343 | argC N-acetyl-gamma-glutamyl-phosphate reductase; | 97.68 | |
| PRK12749 | 288 | quinate/shikimate dehydrogenase; Reviewed | 97.64 | |
| TIGR01850 | 346 | argC N-acetyl-gamma-glutamyl-phosphate reductase, | 97.62 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 97.61 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 97.57 | |
| PRK13304 | 265 | L-aspartate dehydrogenase; Reviewed | 97.55 | |
| PRK14874 | 334 | aspartate-semialdehyde dehydrogenase; Provisional | 97.55 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 97.54 | |
| COG0002 | 349 | ArgC Acetylglutamate semialdehyde dehydrogenase [A | 97.51 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 97.48 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 97.44 | |
| TIGR01759 | 323 | MalateDH-SF1 malate dehydrogenase. This model repr | 97.44 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 97.43 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 97.43 | |
| PRK05671 | 336 | aspartate-semialdehyde dehydrogenase; Reviewed | 97.42 | |
| PRK13302 | 271 | putative L-aspartate dehydrogenase; Provisional | 97.42 | |
| PLN00106 | 323 | malate dehydrogenase | 97.41 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 97.35 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 97.33 | |
| PLN00112 | 444 | malate dehydrogenase (NADP); Provisional | 97.33 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 97.33 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 97.32 | |
| TIGR00036 | 266 | dapB dihydrodipicolinate reductase. | 97.32 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 97.31 | |
| TIGR01757 | 387 | Malate-DH_plant malate dehydrogenase, NADP-depende | 97.3 | |
| COG0373 | 414 | HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | 97.29 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 97.29 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 97.28 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 97.25 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 97.22 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 97.22 | |
| TIGR01921 | 324 | DAP-DH diaminopimelate dehydrogenase. This model r | 97.21 | |
| TIGR01296 | 339 | asd_B aspartate-semialdehyde dehydrogenase (peptid | 97.2 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 97.2 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 97.19 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 97.19 | |
| PLN02383 | 344 | aspartate semialdehyde dehydrogenase | 97.19 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 97.18 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.18 | |
| PRK05442 | 326 | malate dehydrogenase; Provisional | 97.18 | |
| PRK12550 | 272 | shikimate 5-dehydrogenase; Reviewed | 97.17 | |
| COG0289 | 266 | DapB Dihydrodipicolinate reductase [Amino acid tra | 97.17 | |
| cd01483 | 143 | E1_enzyme_family Superfamily of activating enzymes | 97.16 | |
| PRK08664 | 349 | aspartate-semialdehyde dehydrogenase; Reviewed | 97.15 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 97.11 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 97.11 | |
| PRK08223 | 287 | hypothetical protein; Validated | 97.1 | |
| TIGR01851 | 310 | argC_other N-acetyl-gamma-glutamyl-phosphate reduc | 97.09 | |
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 97.09 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 97.08 | |
| TIGR00978 | 341 | asd_EA aspartate-semialdehyde dehydrogenase (non-p | 97.07 | |
| PLN02520 | 529 | bifunctional 3-dehydroquinate dehydratase/shikimat | 97.06 | |
| COG1712 | 255 | Predicted dinucleotide-utilizing enzyme [General f | 97.05 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 97.01 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 97.01 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 97.01 | |
| PRK13303 | 265 | L-aspartate dehydrogenase; Provisional | 97.0 | |
| cd00650 | 263 | LDH_MDH_like NAD-dependent, lactate dehydrogenase- | 96.99 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 96.98 | |
| PRK06223 | 307 | malate dehydrogenase; Reviewed | 96.98 | |
| PRK08328 | 231 | hypothetical protein; Provisional | 96.97 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 96.96 | |
| PRK11863 | 313 | N-acetyl-gamma-glutamyl-phosphate reductase; Provi | 96.95 | |
| PRK05600 | 370 | thiamine biosynthesis protein ThiF; Validated | 96.94 | |
| PRK15116 | 268 | sulfur acceptor protein CsdL; Provisional | 96.91 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 96.9 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 96.86 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 96.85 | |
| PLN02602 | 350 | lactate dehydrogenase | 96.85 | |
| cd05292 | 308 | LDH_2 A subgroup of L-lactate dehydrogenases. L-la | 96.84 | |
| cd01485 | 198 | E1-1_like Ubiquitin activating enzyme (E1), repeat | 96.78 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 96.78 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 96.78 | |
| cd05293 | 312 | LDH_1 A subgroup of L-lactate dehydrogenases. L-la | 96.77 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 96.76 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 96.76 | |
| cd05295 | 452 | MDH_like Malate dehydrogenase-like. These MDH-like | 96.75 | |
| PTZ00117 | 319 | malate dehydrogenase; Provisional | 96.73 | |
| PRK07877 | 722 | hypothetical protein; Provisional | 96.71 | |
| PF10727 | 127 | Rossmann-like: Rossmann-like domain; InterPro: IPR | 96.71 | |
| cd05311 | 226 | NAD_bind_2_malic_enz NAD(P) binding domain of mali | 96.69 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 96.67 | |
| PRK09310 | 477 | aroDE bifunctional 3-dehydroquinate dehydratase/sh | 96.66 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 96.64 | |
| PRK06728 | 347 | aspartate-semialdehyde dehydrogenase; Provisional | 96.63 | |
| COG2085 | 211 | Predicted dinucleotide-binding enzymes [General fu | 96.62 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 96.62 | |
| PRK08040 | 336 | putative semialdehyde dehydrogenase; Provisional | 96.61 | |
| cd00755 | 231 | YgdL_like Family of activating enzymes (E1) of ubi | 96.6 | |
| PRK13301 | 267 | putative L-aspartate dehydrogenase; Provisional | 96.59 | |
| PRK05447 | 385 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; P | 96.55 | |
| PRK07878 | 392 | molybdopterin biosynthesis-like protein MoeZ; Vali | 96.53 | |
| PRK07340 | 304 | ornithine cyclodeaminase; Validated | 96.53 | |
| smart00859 | 122 | Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin | 96.52 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 96.52 | |
| PRK08618 | 325 | ornithine cyclodeaminase; Validated | 96.51 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 96.51 | |
| cd01484 | 234 | E1-2_like Ubiquitin activating enzyme (E1), repeat | 96.51 | |
| cd05290 | 307 | LDH_3 A subgroup of L-lactate dehydrogenases. L-la | 96.5 | |
| cd01337 | 310 | MDH_glyoxysomal_mitochondrial Glyoxysomal and mito | 96.5 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 96.49 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 96.49 | |
| PRK14851 | 679 | hypothetical protein; Provisional | 96.48 | |
| PRK11559 | 296 | garR tartronate semialdehyde reductase; Provisiona | 96.47 | |
| PRK07411 | 390 | hypothetical protein; Validated | 96.46 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 96.44 | |
| PRK09599 | 301 | 6-phosphogluconate dehydrogenase-like protein; Rev | 96.43 | |
| TIGR00872 | 298 | gnd_rel 6-phosphogluconate dehydrogenase (decarbox | 96.43 | |
| PF02571 | 249 | CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: | 96.42 | |
| cd01489 | 312 | Uba2_SUMO Ubiquitin activating enzyme (E1) subunit | 96.4 | |
| PF01408 | 120 | GFO_IDH_MocA: Oxidoreductase family, NAD-binding R | 96.39 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 96.36 | |
| PRK08057 | 248 | cobalt-precorrin-6x reductase; Reviewed | 96.33 | |
| PRK06153 | 393 | hypothetical protein; Provisional | 96.31 | |
| TIGR01505 | 291 | tartro_sem_red 2-hydroxy-3-oxopropionate reductase | 96.25 | |
| TIGR01761 | 343 | thiaz-red thiazolinyl imide reductase. This reduct | 96.25 | |
| COG2084 | 286 | MmsB 3-hydroxyisobutyrate dehydrogenase and relate | 96.25 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 96.21 | |
| PTZ00082 | 321 | L-lactate dehydrogenase; Provisional | 96.19 | |
| cd01339 | 300 | LDH-like_MDH L-lactate dehydrogenase-like malate d | 96.17 | |
| cd00300 | 300 | LDH_like L-lactate dehydrogenase-like enzymes. Mem | 96.16 | |
| PRK06270 | 341 | homoserine dehydrogenase; Provisional | 96.12 | |
| COG0673 | 342 | MviM Predicted dehydrogenases and related proteins | 96.09 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 96.07 | |
| PRK14852 | 989 | hypothetical protein; Provisional | 96.03 | |
| TIGR02130 | 275 | dapB_plant dihydrodipicolinate reductase. This nar | 96.02 | |
| PRK08291 | 330 | ectoine utilization protein EutC; Validated | 96.0 | |
| cd01486 | 307 | Apg7 Apg7 is an E1-like protein, that activates tw | 95.97 | |
| PRK10669 | 558 | putative cation:proton antiport protein; Provision | 95.96 | |
| COG0039 | 313 | Mdh Malate/lactate dehydrogenases [Energy producti | 95.94 | |
| PRK12490 | 299 | 6-phosphogluconate dehydrogenase-like protein; Rev | 95.94 | |
| TIGR02992 | 326 | ectoine_eutC ectoine utilization protein EutC. Mem | 95.89 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 95.87 | |
| PLN02350 | 493 | phosphogluconate dehydrogenase (decarboxylating) | 95.84 | |
| COG1064 | 339 | AdhP Zn-dependent alcohol dehydrogenases [General | 95.84 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 95.82 | |
| PRK03562 | 621 | glutathione-regulated potassium-efflux system prot | 95.78 | |
| PRK06141 | 314 | ornithine cyclodeaminase; Validated | 95.76 | |
| COG0743 | 385 | Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomeras | 95.75 | |
| PRK06598 | 369 | aspartate-semialdehyde dehydrogenase; Reviewed | 95.75 | |
| TIGR01772 | 312 | MDH_euk_gproteo malate dehydrogenase, NAD-dependen | 95.74 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 95.71 | |
| PF01210 | 157 | NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate | 95.7 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 95.7 | |
| PRK08300 | 302 | acetaldehyde dehydrogenase; Validated | 95.69 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 95.68 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 95.67 | |
| PTZ00142 | 470 | 6-phosphogluconate dehydrogenase; Provisional | 95.64 | |
| PRK03659 | 601 | glutathione-regulated potassium-efflux system prot | 95.62 | |
| PRK06349 | 426 | homoserine dehydrogenase; Provisional | 95.6 | |
| PF02670 | 129 | DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re | 95.6 | |
| TIGR01692 | 288 | HIBADH 3-hydroxyisobutyrate dehydrogenase. This en | 95.59 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.59 | |
| PRK15461 | 296 | NADH-dependent gamma-hydroxybutyrate dehydrogenase | 95.53 | |
| TIGR01763 | 305 | MalateDH_bact malate dehydrogenase, NAD-dependent. | 95.53 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 95.52 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 95.48 | |
| PRK00094 | 325 | gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr | 95.44 | |
| PRK04207 | 341 | glyceraldehyde-3-phosphate dehydrogenase; Provisio | 95.42 | |
| PRK09424 | 509 | pntA NAD(P) transhydrogenase subunit alpha; Provis | 95.39 | |
| TIGR01019 | 286 | sucCoAalpha succinyl-CoA synthetase, alpha subunit | 95.37 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 95.34 | |
| PLN03154 | 348 | putative allyl alcohol dehydrogenase; Provisional | 95.31 | |
| TIGR00561 | 511 | pntA NAD(P) transhydrogenase, alpha subunit. In so | 95.3 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 95.25 | |
| KOG0023 | 360 | consensus Alcohol dehydrogenase, class V [Secondar | 95.2 | |
| TIGR01381 | 664 | E1_like_apg7 E1-like protein-activating enzyme Gsa | 95.15 | |
| TIGR00873 | 467 | gnd 6-phosphogluconate dehydrogenase, decarboxylat | 95.13 | |
| PLN02696 | 454 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase | 95.11 | |
| TIGR03736 | 244 | PRTRC_ThiF PRTRC system ThiF family protein. A nov | 95.04 | |
| TIGR02371 | 325 | ala_DH_arch alanine dehydrogenase, Archaeoglobus f | 94.97 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 94.95 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.93 | |
| cd05296 | 419 | GH4_P_beta_glucosidase Glycoside Hydrolases Family | 94.83 | |
| TIGR01771 | 299 | L-LDH-NAD L-lactate dehydrogenase. This model repr | 94.77 | |
| cd05276 | 323 | p53_inducible_oxidoreductase PIG3 p53-inducible qu | 94.72 | |
| COG2099 | 257 | CobK Precorrin-6x reductase [Coenzyme metabolism] | 94.72 | |
| TIGR03693 | 637 | ocin_ThiF_like putative thiazole-containing bacter | 94.7 | |
| PRK06129 | 308 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 94.68 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 94.67 | |
| COG1179 | 263 | Dinucleotide-utilizing enzymes involved in molybdo | 94.57 | |
| PRK06823 | 315 | ornithine cyclodeaminase; Validated | 94.56 | |
| TIGR00243 | 389 | Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomeras | 94.54 | |
| PRK07502 | 307 | cyclohexadienyl dehydrogenase; Validated | 94.54 | |
| PF01262 | 168 | AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal | 94.52 | |
| cd01491 | 286 | Ube1_repeat1 Ubiquitin activating enzyme (E1), rep | 94.52 | |
| PRK08374 | 336 | homoserine dehydrogenase; Provisional | 94.48 | |
| COG0686 | 371 | Ald Alanine dehydrogenase [Amino acid transport an | 94.45 | |
| PRK09260 | 288 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 94.42 |
| >KOG2733 consensus Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-94 Score=696.27 Aligned_cols=411 Identities=43% Similarity=0.760 Sum_probs=371.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCC---CCCCccEEEEeCCCHHHHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS---HSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~---~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
+||++|+|||||+|+++++++++.+.- +...|+++|||++||++++++++.. +.....++.+|.+|+++|.+++
T Consensus 5 ~yDvVIyGASGfTG~yivee~v~~~~~---~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~ema 81 (423)
T KOG2733|consen 5 RYDVVIYGASGFTGKYIVEEAVSSQVF---EGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMA 81 (423)
T ss_pred eeeEEEEccccccceeeHHHHhhhhcc---cCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHH
Confidence 699999999999999999999994421 1289999999999999999988652 2233459999999999999999
Q ss_pred cCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhh
Q 012947 87 SQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQ 166 (452)
Q Consensus 87 ~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~ 166 (452)
+++.+||||+|||..+|++|++||+++|+||||++||+.|++.|+.+||++|+++|+.||++|||||+|.||+++++.+.
T Consensus 82 k~~~vivN~vGPyR~hGE~VVkacienG~~~vDISGEP~f~E~mq~kYhd~A~ekGVYIVsaCGfDSIPaDlGv~f~~k~ 161 (423)
T KOG2733|consen 82 KQARVIVNCVGPYRFHGEPVVKACIENGTHHVDISGEPQFMERMQLKYHDLAKEKGVYIVSACGFDSIPADLGVMFLRKN 161 (423)
T ss_pred hhhEEEEeccccceecCcHHHHHHHHcCCceeccCCCHHHHHHHHHHHHHHHHhcCeEEEeecccCCCCccceeeeehhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcceEEEEEEecc-CCc-cccccccHHHHHHhHhcchhhHHHHhcCCCCCCCCCCCCCCCCCCccccccccCeEE
Q 012947 167 WIPPAVPNQIEAYVSLES-DKR-IVGNFGTYESAVLGVANAQELQKLRRSRPRRARPVIPGPAPLRGPLVESQKRIGLWA 244 (452)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~-~~~-~~g~~GT~~S~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (452)
+. +.++.||+|+.|+. |++ ++-|.|||+|+++++++.+++.+||++..|.+++... |++++++.++..++.+.|+
T Consensus 162 fd--g~ln~VEsfl~Lh~~gp~G~sln~gTweSallg~~n~~~l~~lR~~~~p~~ip~~~-~~lkkR~~l~~~~e~~g~a 238 (423)
T KOG2733|consen 162 FD--GVLNHVESFLQLHSKGPSGYSLNTGTWESALLGVANASELKALRKSIMPQPIPNGC-PPLKKRPTLWKIKEKGGVA 238 (423)
T ss_pred cc--ccHHHHHHHHhhhccCCcccccccccHHHHHHHhcChHHHHHHHhhhCCCcCccCC-CCCCCCCceeeeeeccceE
Confidence 98 56889999999987 654 5567899999999999999999999998877765543 3456677777778888999
Q ss_pred EeCCCCchhhhhhhhhccccCCCCCCCCCCChhHHhhhhhhcCCCcCeeEEEEeeccchHHHHHHHHHHHHHHHhhccch
Q 012947 245 IKLPSADATVVRRTLSILTENPHGLPGANESPEQREKREAFWSTVKPAHFGVKLGSKSLLDIFRFIILGISIGLLSGLSF 324 (452)
Q Consensus 245 ~~f~~~d~~vV~RS~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 324 (452)
+||+++|.+||+|||.++... ...+|.||..|++++++++++.+++++.++.++++|++
T Consensus 239 lpFpgaD~SVV~RSQ~~l~~~---------------------~~~rPv~~~ay~~~~s~~~~~~~~~~~~~~~~fskf~~ 297 (423)
T KOG2733|consen 239 LPFPGADKSVVRRSQYYLYES---------------------RKVRPVHMQAYITVGSRFGAIKLVFFGWILGFFSKFSF 297 (423)
T ss_pred eecCCCchhheehHHHHHHHh---------------------ccCCceeEEEEEeeccchHHHHHHHHHHHHHHHHhhhH
Confidence 999999999999999876532 24679999999999999999999999999999999999
Q ss_pred hhhhhhccCcccccCccCCCCCCHhhhccceEEEEEEEEecCCCccccc-CCCCCCceEEEEEecCCCcchhHHHHHHHH
Q 012947 325 GRWLLLKFPSIFSLGWFRKRGPSEDEVESASFKMWFIGHGFSDSSLVSQ-GNAKPDMEIITRVTGPEIGYIATPIILMQC 403 (452)
Q Consensus 325 ~R~ll~~~p~~fs~g~~~g~GPs~~~~~~~~f~~~~~a~g~~~~~~~~~-~~~~~~~~~~~~~~g~dpgY~~Ta~~l~e~ 403 (452)
+||||++||++||+|+|+.+|||++||++..|+++|+|.||++.+..++ ++.+++++++++++||||||.+|++++.++
T Consensus 298 gR~lLlkyP~~fSfg~fsksGPSe~qm~~AtFt~~f~g~Gy~~~~~l~~~~~~~~~~kl~~~~sGPd~gYiaT~i~vlsa 377 (423)
T KOG2733|consen 298 GRRLLLKYPDFFSFGMFSKSGPSEEQMEEATFTMWFFGYGYKEGEPLDKQHEQKTDKKLLVRCSGPDPGYIATSICVLSA 377 (423)
T ss_pred HHHHHHhCcccccccccccCCCCHHHHhhcEEEEEEEEeccCCCCccccccccccccEEEEEecCCCcchhhccHHHHHH
Confidence 9999999999999999999999999999999999999999988554443 344567899999999999999999999999
Q ss_pred HHHhhhccCCCC-CCccccccccccCCchHHHHhhCCcEEEEeeC
Q 012947 404 ALIVLSQREILP-KGGVFPPGIVFGATELQQRLQENGISFDVISK 447 (452)
Q Consensus 404 Al~ll~~~~~~~-~gGvlTPa~afg~~~li~rL~~~G~~f~v~~~ 447 (452)
||+||.+++++| .|||||||+|||+|+++|||+++|++||++++
T Consensus 378 alt~L~~~~~lpk~GGV~tPaaaF~~T~i~~~L~~~GI~Fel~s~ 422 (423)
T KOG2733|consen 378 ALTLLKDKDKLPKGGGVYTPAAAFGNTKIIDRLAKHGIKFELISE 422 (423)
T ss_pred HHHHHHHhhcCCCCCCccCchhhhcCChHHHHHHhcCceEEEEeC
Confidence 999999999999 79999999999999999999999999999875
|
|
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-56 Score=427.13 Aligned_cols=368 Identities=28% Similarity=0.424 Sum_probs=277.2
Q ss_pred CCCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 012947 6 QIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 6 ~~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
.+.++++++|+|||||+|+.++++|++++ .+.++++||..|+..+.+.|+. +.. ..++-+++.++++
T Consensus 2 ~~e~e~d~iiYGAtGy~G~lvae~l~~~g-------~~~aLAgRs~~kl~~l~~~LG~----~~~--~~p~~~p~~~~~~ 68 (382)
T COG3268 2 PMEREYDIIIYGATGYAGGLVAEYLAREG-------LTAALAGRSSAKLDALRASLGP----EAA--VFPLGVPAALEAM 68 (382)
T ss_pred CCCcceeEEEEccccchhHHHHHHHHHcC-------CchhhccCCHHHHHHHHHhcCc----ccc--ccCCCCHHHHHHH
Confidence 45688999999999999999999999998 5679999999999999998852 333 3344559999999
Q ss_pred HcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhh
Q 012947 86 CSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSR 165 (452)
Q Consensus 86 ~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~ 165 (452)
+++++||+||+|||..++++++++|+.+|+||+||+||..|.+.++.+||++|+.+|+.||++|||||+|+|+++|.+.+
T Consensus 69 ~~~~~VVlncvGPyt~~g~plv~aC~~~GTdY~DiTGEi~~fe~~i~~yh~~A~~~Ga~Ii~~cGFDsIPsDl~v~~l~~ 148 (382)
T COG3268 69 ASRTQVVLNCVGPYTRYGEPLVAACAAAGTDYADITGEIMFFENSIDLYHAQAADAGARIIPGCGFDSIPSDLGVYALLK 148 (382)
T ss_pred HhcceEEEeccccccccccHHHHHHHHhCCCeeeccccHHHHHHHHHHHHHHHHhcCCEEeccCCCCcCccchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred hcCCCC--CcceEEEEEEeccCCccccccccHHHHHHhHhcchhhHHHHhc-CCCCCCCCCCC--CCCCCCCcccccccc
Q 012947 166 QWIPPA--VPNQIEAYVSLESDKRIVGNFGTYESAVLGVANAQELQKLRRS-RPRRARPVIPG--PAPLRGPLVESQKRI 240 (452)
Q Consensus 166 ~~~~~~--~~~~~~~~~~~~~~~~~~g~~GT~~S~~~~~~~~~~~~~l~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~ 240 (452)
+..+.+ ++-..+..+....+.++|| ||.+|.+..+......+.-++. ..|+.+..-.. +..+.+.-.+..+.+
T Consensus 149 ~~~~d~~~~~~~t~l~l~s~t~~g~S~--GTaat~~e~l~~~~~~~~~gr~~~~P~~~~~~r~~~iDf~~~rg~~~a~~~ 226 (382)
T COG3268 149 QALPDGTEELIATHLALGSFTGSGISG--GTAATSVEGLATAGKDPEAGRLLRVPYALKKRRGAEIDFPSRRGRRLAPTL 226 (382)
T ss_pred hhCcccccchhhhheeeeecccCCccc--ccHHHHHHHHHhccCCcccCceeccCceeccCCCCCCCcccCCccccCccc
Confidence 887652 3334555554444444666 9999999998876555433332 33444322111 111111111122233
Q ss_pred CeEEEeC--CCCchhhhhhhhhccccCCCCCCCCCCChhHHhhhhhhcCCCcCeeEEEEeeccchHHHH-HHHHHHHHHH
Q 012947 241 GLWAIKL--PSADATVVRRTLSILTENPHGLPGANESPEQREKREAFWSTVKPAHFGVKLGSKSLLDIF-RFIILGISIG 317 (452)
Q Consensus 241 ~~~~~~f--~~~d~~vV~RS~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~-~~~~~~~~~~ 317 (452)
+ | +| ...|+.||+|||.+. . |.+ .+..+.+. ..+...+.+.
T Consensus 227 ~-W--g~V~a~~~t~iv~rsn~l~-~---------------------~~~-----------~~pv~~~a~~~~~~~~~ll 270 (382)
T COG3268 227 P-W--GFVAAAFNTTIVPRSNALE-V---------------------WIY-----------AAPVLALAGRGIGALLPLL 270 (382)
T ss_pred C-c--hhhhhhhccCcccccccee-e---------------------eec-----------hhHHHHHHHhccchhhhhh
Confidence 3 6 55 488999999999772 1 111 11111111 1111111111
Q ss_pred Hhhc-cchhhhhhhcc-CcccccCccCCCCCCHhhhccceEEEEEEEEecCCCcccccCCCCCCceEEEEEecCCCcchh
Q 012947 318 LLSG-LSFGRWLLLKF-PSIFSLGWFRKRGPSEDEVESASFKMWFIGHGFSDSSLVSQGNAKPDMEIITRVTGPEIGYIA 395 (452)
Q Consensus 318 ~l~~-~~~~R~ll~~~-p~~fs~g~~~g~GPs~~~~~~~~f~~~~~a~g~~~~~~~~~~~~~~~~~~~~~~~g~dpgY~~ 395 (452)
.... -.+.|+++.|+ |+ ||.||++|.++.|++.++.+++..++ .+..+++..... |..
T Consensus 271 ~~~~~~~~~r~lv~r~~~k-------~g~GPt~e~qarg~~~~~~~~~tatG------------~r~~ari~t~~~-y~s 330 (382)
T COG3268 271 GSAYVRDLLRGLVLRVVPK-------PGTGPTEEAQARGRYTIEGETTTATG------------ERYTARITTDND-YYS 330 (382)
T ss_pred hhHHHhhhhHhhhheeccC-------CCCCCCHHHHhcCcceEEEEEEeccC------------CceeeEEecccc-hHH
Confidence 1111 23567777777 43 99999999999999999988876432 235678887755 999
Q ss_pred HHHHHHHHHHHhhhccCCCC-CCccccccccccCCchHHHHhhCCcEEEEe
Q 012947 396 TPIILMQCALIVLSQREILP-KGGVFPPGIVFGATELQQRLQENGISFDVI 445 (452)
Q Consensus 396 Ta~~l~e~Al~ll~~~~~~~-~gGvlTPa~afg~~~li~rL~~~G~~f~v~ 445 (452)
|++.++++|++++.+++++. .|||+|||++||. +||+||-.+|+.|++.
T Consensus 331 tav~~a~~~l~~ald~~~~~~~gGv~TPA~~lG~-dlv~rLp~aGv~~~~~ 380 (382)
T COG3268 331 TAVLLAQAALALALDRDKLSEPGGVLTPAAALGA-DLVERLPGAGVTFGTT 380 (382)
T ss_pred HHHHHHHHHHHHHhcCCcccCCCcccChHHHHhH-HHHHhcccccceeecc
Confidence 99999999999999998776 7999999999996 8999999999999864
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.8e-24 Score=222.76 Aligned_cols=150 Identities=27% Similarity=0.472 Sum_probs=121.6
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCCCCCCce-EEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCccE
Q 012947 13 VIILGASGFTGKYVVREALKLFNFPSSPIK-SLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKL 91 (452)
Q Consensus 13 ilV~GATG~iG~~va~~L~~~g~~~~~~~~-~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~dv 91 (452)
|+|+|| |++|+.++++|+++.+ . +|++++|+.++++++.+++. ..++..+.+|++|.++|.++++++|+
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~------~~~v~va~r~~~~~~~~~~~~~---~~~~~~~~~d~~~~~~l~~~~~~~dv 70 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGP------FEEVTVADRNPEKAERLAEKLL---GDRVEAVQVDVNDPESLAELLRGCDV 70 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTC------E-EEEEEESSHHHHHHHHT--T---TTTEEEEE--TTTHHHHHHHHTTSSE
T ss_pred CEEEcC-cHHHHHHHHHHhcCCC------CCcEEEEECCHHHHHHHHhhcc---ccceeEEEEecCCHHHHHHHHhcCCE
Confidence 799999 9999999999999874 5 99999999999999987652 46889999999999999999999999
Q ss_pred EeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhhcCCCC
Q 012947 92 LLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWIPPA 171 (452)
Q Consensus 92 VIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~~~~~~ 171 (452)
||||+||+ ++.+++++|++.|+||||.+. +...+..+++.|+++|+.++++||++++++++.+..+.+++..
T Consensus 71 Vin~~gp~--~~~~v~~~~i~~g~~yvD~~~----~~~~~~~l~~~a~~~g~~~l~~~G~~PGl~~~~a~~~~~~~~~-- 142 (386)
T PF03435_consen 71 VINCAGPF--FGEPVARACIEAGVHYVDTSY----VTEEMLALDEEAKEAGVTALPGCGFDPGLSNLLARYAADELDA-- 142 (386)
T ss_dssp EEE-SSGG--GHHHHHHHHHHHT-EEEESS-----HHHHHHHCHHHHHHTTSEEE-S-BTTTBHHHHHHHHHHHHHHH--
T ss_pred EEECCccc--hhHHHHHHHHHhCCCeeccch----hHHHHHHHHHHHHhhCCEEEeCcccccchHHHHHHHHHHHhhh--
Confidence 99999998 668999999999999999654 3444578899999999999999999999999999999999972
Q ss_pred CcceEEEEE
Q 012947 172 VPNQIEAYV 180 (452)
Q Consensus 172 ~~~~~~~~~ 180 (452)
....++++.
T Consensus 143 ~~~~v~~~~ 151 (386)
T PF03435_consen 143 EGDEVESVD 151 (386)
T ss_dssp TTHEEEEEE
T ss_pred hcccceEEE
Confidence 234444444
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.2e-17 Score=166.19 Aligned_cols=152 Identities=22% Similarity=0.364 Sum_probs=133.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
++|+|+|| |++|+.++..|+++++ .+|.+++|+.++++++.+.. ..+++.+++|+.|.+++.+++++.|
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d------~~V~iAdRs~~~~~~i~~~~----~~~v~~~~vD~~d~~al~~li~~~d 70 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGD------GEVTIADRSKEKCARIAELI----GGKVEALQVDAADVDALVALIKDFD 70 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCC------ceEEEEeCCHHHHHHHHhhc----cccceeEEecccChHHHHHHHhcCC
Confidence 57999999 9999999999999984 79999999999998887754 3489999999999999999999999
Q ss_pred EEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhhcCCC
Q 012947 91 LLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWIPP 170 (452)
Q Consensus 91 vVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~~~~~ 170 (452)
+||||+.|+.. ..++++|+++|+||||++...... .++++.++++|+.+|+.|||++.-+++.+..+++++.+
T Consensus 71 ~VIn~~p~~~~--~~i~ka~i~~gv~yvDts~~~~~~----~~~~~~a~~Agit~v~~~G~dPGi~nv~a~~a~~~~~~- 143 (389)
T COG1748 71 LVINAAPPFVD--LTILKACIKTGVDYVDTSYYEEPP----WKLDEEAKKAGITAVLGCGFDPGITNVLAAYAAKELFD- 143 (389)
T ss_pred EEEEeCCchhh--HHHHHHHHHhCCCEEEcccCCchh----hhhhHHHHHcCeEEEcccCcCcchHHHHHHHHHHHhhc-
Confidence 99999977644 689999999999999999766552 56789999999999999999999999999888888863
Q ss_pred CCcceEEEEEE
Q 012947 171 AVPNQIEAYVS 181 (452)
Q Consensus 171 ~~~~~~~~~~~ 181 (452)
...+++++..
T Consensus 144 -~i~si~iy~g 153 (389)
T COG1748 144 -EIESIDIYVG 153 (389)
T ss_pred -cccEEEEEEe
Confidence 4677777765
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.4e-14 Score=140.19 Aligned_cols=149 Identities=19% Similarity=0.225 Sum_probs=108.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
+...++|||||++||+.+++.|+++| +++++++|+++||+++.+++.......+.++.+|++|++++.++.+
T Consensus 5 ~~~~~lITGASsGIG~~~A~~lA~~g-------~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~ 77 (265)
T COG0300 5 KGKTALITGASSGIGAELAKQLARRG-------YNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDE 77 (265)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHH
Confidence 34689999999999999999999999 8999999999999999999864234567899999999999988775
Q ss_pred ------CccEEeecCCCCCCCCHHHHHHHHH--hCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHH
Q 012947 88 ------QTKLLLNCVGPYRLHGDPVAAACVH--SGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELG 159 (452)
Q Consensus 88 ------~~dvVIn~aGp~~~~~~~vv~ac~~--~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~ 159 (452)
.+|++|||||... ++ ++.+.-.+ ...--+++.+...+++.+.+.+.++.+..-+.|.|..|+-+.| .+.
T Consensus 78 l~~~~~~IdvLVNNAG~g~-~g-~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p-~~a 154 (265)
T COG0300 78 LKERGGPIDVLVNNAGFGT-FG-PFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTP-YMA 154 (265)
T ss_pred HHhcCCcccEEEECCCcCC-cc-chhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCc-chH
Confidence 5899999999533 22 12221111 1122345556666667776666553333333466778887776 567
Q ss_pred HHHHhhhc
Q 012947 160 VMFNSRQW 167 (452)
Q Consensus 160 ~~~~~~~~ 167 (452)
+|.+.|.+
T Consensus 155 vY~ATKa~ 162 (265)
T COG0300 155 VYSATKAF 162 (265)
T ss_pred HHHHHHHH
Confidence 77776665
|
|
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.7e-11 Score=138.20 Aligned_cols=159 Identities=18% Similarity=0.164 Sum_probs=123.2
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCC-------CCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFP-------SSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPS 81 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~-------~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~s 81 (452)
+..+|+|+|| |++|+.++++|++..... ......|++++++.++++++.+.+ .++..+..|++|.++
T Consensus 568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~-----~~~~~v~lDv~D~e~ 641 (1042)
T PLN02819 568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI-----ENAEAVQLDVSDSES 641 (1042)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc-----CCCceEEeecCCHHH
Confidence 4678999998 999999999999864200 001134899999999988887754 356789999999999
Q ss_pred HHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHH
Q 012947 82 LHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVM 161 (452)
Q Consensus 82 l~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~ 161 (452)
+.++++++|+||+|..+ .. ...++++|+++|+||++.+....- ...+++.|+++|+.+++.|||++.-..|.+.
T Consensus 642 L~~~v~~~DaVIsalP~-~~-H~~VAkaAieaGkHvv~eky~~~e----~~~L~e~Ak~AGV~~m~e~GlDPGid~~lA~ 715 (1042)
T PLN02819 642 LLKYVSQVDVVISLLPA-SC-HAVVAKACIELKKHLVTASYVSEE----MSALDSKAKEAGITILCEMGLDPGIDHMMAM 715 (1042)
T ss_pred HHHhhcCCCEEEECCCc-hh-hHHHHHHHHHcCCCEEECcCCHHH----HHHHHHHHHHcCCEEEECCccCHHHHHHHHH
Confidence 99999999999999954 33 379999999999999999844333 3566889999999999999999888777777
Q ss_pred HHhhhcCCCCCcceEEEEEE
Q 012947 162 FNSRQWIPPAVPNQIEAYVS 181 (452)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~ 181 (452)
.+.++.... ...+.++.+
T Consensus 716 ~~Id~~~~~--~GkI~s~~s 733 (1042)
T PLN02819 716 KMIDDAHER--GGKVKSFTS 733 (1042)
T ss_pred HHHHhhccc--CCcEEEEEE
Confidence 667666422 334444443
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.36 E-value=3.4e-12 Score=120.90 Aligned_cols=119 Identities=19% Similarity=0.150 Sum_probs=93.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
.-++|||||++||.++++.|++.| ++|++++|+.++|+++.+++.. ..+..+..|++|.++++++++
T Consensus 7 kv~lITGASSGiG~A~A~~l~~~G-------~~vvl~aRR~drL~~la~~~~~---~~~~~~~~DVtD~~~~~~~i~~~~ 76 (246)
T COG4221 7 KVALITGASSGIGEATARALAEAG-------AKVVLAARREERLEALADEIGA---GAALALALDVTDRAAVEAAIEALP 76 (246)
T ss_pred cEEEEecCcchHHHHHHHHHHHCC-------CeEEEEeccHHHHHHHHHhhcc---CceEEEeeccCCHHHHHHHHHHHH
Confidence 569999999999999999999999 8999999999999999999852 467889999999999777765
Q ss_pred ----CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEe--cCcHHHHHHHHHHHHHHHHhCcc
Q 012947 88 ----QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDI--SGEPEFMERMEARYHEKAVETGS 143 (452)
Q Consensus 88 ----~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDl--sge~~~~~~~~~~~~~~A~~~gv 143 (452)
++|++|||||.+.. .++.++-.+.+-..||+ .|-...++..++.+ .+++.|-
T Consensus 77 ~~~g~iDiLvNNAGl~~g--~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m--~~r~~G~ 134 (246)
T COG4221 77 EEFGRIDILVNNAGLALG--DPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGM--VERKSGH 134 (246)
T ss_pred HhhCcccEEEecCCCCcC--ChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHH--HhcCCce
Confidence 68999999997654 56666666665554444 45555556655444 4555663
|
|
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.3e-11 Score=122.29 Aligned_cols=87 Identities=22% Similarity=0.255 Sum_probs=74.3
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHH--HHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQ--ALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~--l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
....|+|||||||||++|++.|+++| ++|....|++++.+. .+.++.. ...++.++.+|+.|++++.+++
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rG-------Y~V~gtVR~~~~~k~~~~L~~l~~-a~~~l~l~~aDL~d~~sf~~ai 76 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRG-------YTVRGTVRDPEDEKKTEHLRKLEG-AKERLKLFKADLLDEGSFDKAI 76 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCC-------CEEEEEEcCcchhhhHHHHHhccc-CcccceEEeccccccchHHHHH
Confidence 34789999999999999999999999 999999999887444 3555542 2346899999999999999999
Q ss_pred cCccEEeecCCCCCCCC
Q 012947 87 SQTKLLLNCVGPYRLHG 103 (452)
Q Consensus 87 ~~~dvVIn~aGp~~~~~ 103 (452)
++||.|+|+|.|+....
T Consensus 77 ~gcdgVfH~Asp~~~~~ 93 (327)
T KOG1502|consen 77 DGCDGVFHTASPVDFDL 93 (327)
T ss_pred hCCCEEEEeCccCCCCC
Confidence 99999999999976643
|
|
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.29 E-value=2.9e-11 Score=117.94 Aligned_cols=147 Identities=17% Similarity=0.129 Sum_probs=108.2
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHH----HHHHHc
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPS----LHRLCS 87 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~s----l~~~~~ 87 (452)
=.+|+|||.+||+..+++|+++| ++|++++|+++||+++.+++......++.++.+|.++++. +.+.+.
T Consensus 51 WAVVTGaTDGIGKayA~eLAkrG-------~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~ 123 (312)
T KOG1014|consen 51 WAVVTGATDGIGKAYARELAKRG-------FNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLA 123 (312)
T ss_pred EEEEECCCCcchHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhc
Confidence 38999999999999999999999 8999999999999999999864233568899999987664 566666
Q ss_pred Cc--cEEeecCCCCCCCCHHHHHHHHH--hCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEE--cCCCCCcchhhHHHH
Q 012947 88 QT--KLLLNCVGPYRLHGDPVAAACVH--SGCDYLDISGEPEFMERMEARYHEKAVETGSLLV--SACGFDSIPAELGVM 161 (452)
Q Consensus 88 ~~--dvVIn~aGp~~~~~~~vv~ac~~--~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv--~~~G~~s~P~dl~~~ 161 (452)
+. -++|||+|....+.+...+.-.. ..+.-|++.+.....+.+.+.+. .+++|+++. ++.|..+.| .+.+|
T Consensus 124 ~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~--~r~~G~IvnigS~ag~~p~p-~~s~y 200 (312)
T KOG1014|consen 124 GLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMV--ERKKGIIVNIGSFAGLIPTP-LLSVY 200 (312)
T ss_pred CCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhh--cCCCceEEEeccccccccCh-hHHHH
Confidence 54 58999999877666666655442 23446666666667777665544 467787765 444554555 45667
Q ss_pred HHhhhcC
Q 012947 162 FNSRQWI 168 (452)
Q Consensus 162 ~~~~~~~ 168 (452)
.+.|.+-
T Consensus 201 sasK~~v 207 (312)
T KOG1014|consen 201 SASKAFV 207 (312)
T ss_pred HHHHHHH
Confidence 7776653
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.4e-11 Score=120.38 Aligned_cols=147 Identities=18% Similarity=0.199 Sum_probs=100.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCC-CccEEEEeCCCHHHHHHHHc
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSL-SIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~-~v~~v~~Dl~d~~sl~~~~~ 87 (452)
+...++|||||++||.++|.+|++.| .++++..|..++++.+.+++...... ++.++.+|++|.+++.++++
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G-------~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~ 83 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRG-------AKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVE 83 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCC-------CceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHH
Confidence 45679999999999999999999999 78888888888887776666431122 58899999999999997764
Q ss_pred -------CccEEeecCCCCCCCCHHHHHHHHH--hCCcEEEecCcHHHHHHHHHHHHHHHHhCccE-EEcCCCCCcchhh
Q 012947 88 -------QTKLLLNCVGPYRLHGDPVAAACVH--SGCDYLDISGEPEFMERMEARYHEKAVETGSL-LVSACGFDSIPAE 157 (452)
Q Consensus 88 -------~~dvVIn~aGp~~~~~~~vv~ac~~--~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~-iv~~~G~~s~P~d 157 (452)
+.|++|||||... .+ .+...-.+ ..+--+|+-|....++..++.+.++- ...+. |-|.+|..+.|..
T Consensus 84 ~~~~~fg~vDvLVNNAG~~~-~~-~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~-~GhIVvisSiaG~~~~P~~ 160 (282)
T KOG1205|consen 84 WAIRHFGRVDVLVNNAGISL-VG-FLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN-DGHIVVISSIAGKMPLPFR 160 (282)
T ss_pred HHHHhcCCCCEEEecCcccc-cc-ccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC-CCeEEEEeccccccCCCcc
Confidence 6899999999755 22 11111111 11223455577788888776665443 12233 3366788888853
Q ss_pred HHHHHHhhh
Q 012947 158 LGVMFNSRQ 166 (452)
Q Consensus 158 l~~~~~~~~ 166 (452)
.+|.++|+
T Consensus 161 -~~Y~ASK~ 168 (282)
T KOG1205|consen 161 -SIYSASKH 168 (282)
T ss_pred -cccchHHH
Confidence 24444444
|
|
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.1e-10 Score=116.94 Aligned_cols=98 Identities=15% Similarity=0.171 Sum_probs=79.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
|+|+|+|||||+|++++++|+++| ++|.+..|+.++.+.+. ..+++++.+|++|++++.++++++|
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g-------~~V~~l~R~~~~~~~l~-------~~~v~~v~~Dl~d~~~l~~al~g~d 66 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEG-------YQVRCLVRNLRKASFLK-------EWGAELVYGDLSLPETLPPSFKGVT 66 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-------CeEEEEEcChHHhhhHh-------hcCCEEEECCCCCHHHHHHHHCCCC
Confidence 479999999999999999999998 89999999987654332 1367899999999999999999999
Q ss_pred EEeecCCCCCCC-----------CHHHHHHHHHhCC-cEEEecC
Q 012947 91 LLLNCVGPYRLH-----------GDPVAAACVHSGC-DYLDISG 122 (452)
Q Consensus 91 vVIn~aGp~~~~-----------~~~vv~ac~~~g~-~yvDlsg 122 (452)
+|||+++..... ..+++++|.+.|+ ++|.+++
T Consensus 67 ~Vi~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss 110 (317)
T CHL00194 67 AIIDASTSRPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSI 110 (317)
T ss_pred EEEECCCCCCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEecc
Confidence 999998743211 1467788888887 5666654
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.7e-10 Score=105.89 Aligned_cols=73 Identities=22% Similarity=0.464 Sum_probs=66.9
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCccEE
Q 012947 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKLL 92 (452)
Q Consensus 13 ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~dvV 92 (452)
|+|+||||++|+.++++|++++ ++|.+..|+++++++ ..+++++.+|+.|++++.++++++|+|
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~-------~~V~~~~R~~~~~~~---------~~~~~~~~~d~~d~~~~~~al~~~d~v 64 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRG-------HEVTALVRSPSKAED---------SPGVEIIQGDLFDPDSVKAALKGADAV 64 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT-------SEEEEEESSGGGHHH---------CTTEEEEESCTTCHHHHHHHHTTSSEE
T ss_pred eEEECCCChHHHHHHHHHHHCC-------CEEEEEecCchhccc---------ccccccceeeehhhhhhhhhhhhcchh
Confidence 7999999999999999999998 899999999999876 147899999999999999999999999
Q ss_pred eecCCCCCC
Q 012947 93 LNCVGPYRL 101 (452)
Q Consensus 93 In~aGp~~~ 101 (452)
|+++|+...
T Consensus 65 i~~~~~~~~ 73 (183)
T PF13460_consen 65 IHAAGPPPK 73 (183)
T ss_dssp EECCHSTTT
T ss_pred hhhhhhhcc
Confidence 999986543
|
... |
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.4e-10 Score=114.02 Aligned_cols=115 Identities=16% Similarity=0.038 Sum_probs=83.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..+++|+||+|+||++++++|+++| ++|++++|+.+++++..+++.. ...++.++.+|++|.++++++++
T Consensus 6 ~k~vlVtGasggIG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~ 77 (287)
T PRK06194 6 GKVAVITGAASGFGLAFARIGAALG-------MKLVLADVQQDALDRAVAELRA-QGAEVLGVRTDVSDAAQVEALADAA 77 (287)
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCC-------CEEEEEeCChHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 7999999999888877776632 12356778999999999998887
Q ss_pred -----CccEEeecCCCCCCC-----CHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHH
Q 012947 88 -----QTKLLLNCVGPYRLH-----GDPVAAACVHSGCDYLDISGEPEFMERMEARYHEK 137 (452)
Q Consensus 88 -----~~dvVIn~aGp~~~~-----~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~ 137 (452)
+.|+||||||..... ...-.+. ...+++.|...+++...+.+.+.
T Consensus 78 ~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~-----~~~~N~~g~~~~~~~~~~~~~~~ 132 (287)
T PRK06194 78 LERFGAVHLLFNNAGVGAGGLVWENSLADWEW-----VLGVNLWGVIHGVRAFTPLMLAA 132 (287)
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHH-----HHhhccHHHHHHHHHHHHHHHhc
Confidence 469999999965321 1111111 12345556566666655544443
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.1e-10 Score=118.00 Aligned_cols=82 Identities=21% Similarity=0.220 Sum_probs=70.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||||+||+.+++.|+++| ++|++++|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 7 ~k~vlITGAs~GIG~aia~~la~~G-------~~Vvl~~R~~~~l~~~~~~~~~-~g~~~~~~~~Dv~d~~~v~~~~~~~ 78 (330)
T PRK06139 7 GAVVVITGASSGIGQATAEAFARRG-------ARLVLAARDEEALQAVAEECRA-LGAEVLVVPTDVTDADQVKALATQA 78 (330)
T ss_pred CCEEEEcCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEeeCCCHHHHHHHHHHH
Confidence 4589999999999999999999998 8999999999999888776632 23456788999999999998874
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
++|++|||||..
T Consensus 79 ~~~~g~iD~lVnnAG~~ 95 (330)
T PRK06139 79 ASFGGRIDVWVNNVGVG 95 (330)
T ss_pred HHhcCCCCEEEECCCcC
Confidence 579999999853
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.9e-10 Score=110.64 Aligned_cols=132 Identities=16% Similarity=0.066 Sum_probs=105.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||++++|++++.++++++ .++++++.|.+..++.++++.. .+++....||++|.+++.+..+
T Consensus 38 g~~vLITGgg~GlGr~ialefa~rg-------~~~vl~Din~~~~~etv~~~~~--~g~~~~y~cdis~~eei~~~a~~V 108 (300)
T KOG1201|consen 38 GEIVLITGGGSGLGRLIALEFAKRG-------AKLVLWDINKQGNEETVKEIRK--IGEAKAYTCDISDREEIYRLAKKV 108 (300)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHhC-------CeEEEEeccccchHHHHHHHHh--cCceeEEEecCCCHHHHHHHHHHH
Confidence 4569999999999999999999999 7999999999998888888752 2468899999999999887766
Q ss_pred -----CccEEeecCCCCCC-----CCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcch
Q 012947 88 -----QTKLLLNCVGPYRL-----HGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIP 155 (452)
Q Consensus 88 -----~~dvVIn~aGp~~~-----~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P 155 (452)
.+|++|||||.... ..+..++-|.+ |++.+....++.+.+.+.+.-+..-|.|-|.+|..+.|
T Consensus 109 k~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~-----vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~ 181 (300)
T KOG1201|consen 109 KKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFD-----VNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPA 181 (300)
T ss_pred HHhcCCceEEEeccccccCCCccCCCHHHHHHHHH-----HhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCc
Confidence 57999999996433 33667777776 56667677778888877766555556677888887766
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.14 E-value=3.6e-10 Score=116.39 Aligned_cols=89 Identities=15% Similarity=0.179 Sum_probs=69.8
Q ss_pred CCCCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH
Q 012947 5 SQIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHR 84 (452)
Q Consensus 5 ~~~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~ 84 (452)
.+..++++|+|||||||+|+++++.|++++. ++|.+++|+.++.+.+..........+++++.+|+.|.+.+.+
T Consensus 9 ~~~~~~~~VlVTGgtGfIGs~lv~~L~~~~g------~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~ 82 (386)
T PLN02427 9 GKPIKPLTICMIGAGGFIGSHLCEKLMTETP------HKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEG 82 (386)
T ss_pred CCcccCcEEEEECCcchHHHHHHHHHHhcCC------CEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHH
Confidence 3445678999999999999999999999841 6899899987776554321100012368899999999999999
Q ss_pred HHcCccEEeecCCCC
Q 012947 85 LCSQTKLLLNCVGPY 99 (452)
Q Consensus 85 ~~~~~dvVIn~aGp~ 99 (452)
+++++|+|||+|+..
T Consensus 83 ~~~~~d~ViHlAa~~ 97 (386)
T PLN02427 83 LIKMADLTINLAAIC 97 (386)
T ss_pred HhhcCCEEEEccccc
Confidence 999999999999853
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=3e-10 Score=110.23 Aligned_cols=80 Identities=24% Similarity=0.250 Sum_probs=69.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
++++|+||+|++|+.++++|+++| ++|++.+|+.++++++.+++.. ..++.++.+|++|+++++++++
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~Dv~d~~~~~~~~~~~~ 71 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKG-------ARVVISSRNEENLEKALKELKE--YGEVYAVKADLSDKDDLKNLVKEAW 71 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHHHh--cCCceEEEcCCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 8999999999998888777742 2357789999999999988775
Q ss_pred ----CccEEeecCCCC
Q 012947 88 ----QTKLLLNCVGPY 99 (452)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (452)
+.|+||||+|..
T Consensus 72 ~~~g~id~li~naG~~ 87 (259)
T PRK08340 72 ELLGGIDALVWNAGNV 87 (259)
T ss_pred HhcCCCCEEEECCCCC
Confidence 579999999964
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.1e-10 Score=105.50 Aligned_cols=129 Identities=16% Similarity=0.206 Sum_probs=93.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
-.|+|+||+.+||..+++.+.+.| -+|+++||++++|++..++. +.+...+||+.|.++++++++
T Consensus 6 nTiLITGG~sGIGl~lak~f~elg-------N~VIi~gR~e~~L~e~~~~~-----p~~~t~v~Dv~d~~~~~~lvewLk 73 (245)
T COG3967 6 NTILITGGASGIGLALAKRFLELG-------NTVIICGRNEERLAEAKAEN-----PEIHTEVCDVADRDSRRELVEWLK 73 (245)
T ss_pred cEEEEeCCcchhhHHHHHHHHHhC-------CEEEEecCcHHHHHHHHhcC-----cchheeeecccchhhHHHHHHHHH
Confidence 369999999999999999999998 59999999999999988754 578889999999999888876
Q ss_pred ----CccEEeecCCCCCCCC----HHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcch
Q 012947 88 ----QTKLLLNCVGPYRLHG----DPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIP 155 (452)
Q Consensus 88 ----~~dvVIn~aGp~~~~~----~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P 155 (452)
+.++||||||...... +...+...+ ...+++.+....+..+++.+-. +....+|--|+|..-+|
T Consensus 74 k~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~--eI~~Nl~API~Lt~~~lphl~~--q~~a~IInVSSGLafvP 145 (245)
T COG3967 74 KEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQ--EIATNLLAPIRLTALLLPHLLR--QPEATIINVSSGLAFVP 145 (245)
T ss_pred hhCCchheeeecccccchhhccCCcchhhHHHH--HHHHhhhhHHHHHHHHHHHHHh--CCCceEEEeccccccCc
Confidence 5699999999754432 222222111 1234566777777777654433 22333444555665565
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=2e-10 Score=112.98 Aligned_cols=82 Identities=12% Similarity=0.138 Sum_probs=69.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~- 88 (452)
...++|+||+|++|+++++.|+++| ++|++++|+.++++++.+++.. ...++.++.+|++|++++.+++++
T Consensus 6 ~k~vlVTGas~gIG~ala~~La~~G-------~~Vv~~~r~~~~l~~~~~~l~~-~~~~~~~~~~Dv~d~~~v~~~~~~~ 77 (275)
T PRK05876 6 GRGAVITGGASGIGLATGTEFARRG-------ARVVLGDVDKPGLRQAVNHLRA-EGFDVHGVMCDVRHREEVTHLADEA 77 (275)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEeCCCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 7999999999998888777642 123567889999999999888764
Q ss_pred ------ccEEeecCCCC
Q 012947 89 ------TKLLLNCVGPY 99 (452)
Q Consensus 89 ------~dvVIn~aGp~ 99 (452)
+|+||||||..
T Consensus 78 ~~~~g~id~li~nAg~~ 94 (275)
T PRK05876 78 FRLLGHVDVVFSNAGIV 94 (275)
T ss_pred HHHcCCCCEEEECCCcC
Confidence 69999999853
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=3.3e-10 Score=109.41 Aligned_cols=83 Identities=14% Similarity=0.099 Sum_probs=70.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|+||+.+++.|+++| ++|++.+|+.++++++.+++.. ...++..+.+|++|+++++++++
T Consensus 9 ~k~vlVtGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (253)
T PRK05867 9 GKRALITGASTGIGKRVALAYVEAG-------AQVAIAARHLDALEKLADEIGT-SGGKVVPVCCDVSQHQQVTSMLDQV 80 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEcCCHHHHHHHHHHHHh-cCCeEEEEEccCCCHHHHHHHHHHH
Confidence 4579999999999999999999998 7999999999998888777642 12456788999999999988775
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
++|+||||+|...
T Consensus 81 ~~~~g~id~lv~~ag~~~ 98 (253)
T PRK05867 81 TAELGGIDIAVCNAGIIT 98 (253)
T ss_pred HHHhCCCCEEEECCCCCC
Confidence 6799999999754
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=2.4e-10 Score=111.54 Aligned_cols=82 Identities=18% Similarity=0.156 Sum_probs=69.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..++|+||+|+||+.+++.|+++| ++|++.+|+.++++++.+++......++.++.+|++|+++++++++
T Consensus 9 k~~lItGas~gIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~ 81 (263)
T PRK08339 9 KLAFTTASSKGIGFGVARVLARAG-------ADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK 81 (263)
T ss_pred CEEEEeCCCCcHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 8999999999998887776632112467889999999999988876
Q ss_pred ---CccEEeecCCCC
Q 012947 88 ---QTKLLLNCVGPY 99 (452)
Q Consensus 88 ---~~dvVIn~aGp~ 99 (452)
+.|++|||+|..
T Consensus 82 ~~g~iD~lv~nag~~ 96 (263)
T PRK08339 82 NIGEPDIFFFSTGGP 96 (263)
T ss_pred hhCCCcEEEECCCCC
Confidence 479999999864
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=3.3e-10 Score=114.63 Aligned_cols=82 Identities=16% Similarity=0.078 Sum_probs=70.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||||++|+.++++|+++| ++|++++|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 8 ~k~vlITGas~gIG~~la~~la~~G-------~~Vvl~~R~~~~l~~~~~~l~~-~g~~~~~v~~Dv~d~~~v~~~~~~~ 79 (334)
T PRK07109 8 RQVVVITGASAGVGRATARAFARRG-------AKVVLLARGEEGLEALAAEIRA-AGGEALAVVADVADAEAVQAAADRA 79 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHH-cCCcEEEEEecCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 7999999999998887776632 23467788999999999988765
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
++|++|||+|..
T Consensus 80 ~~~~g~iD~lInnAg~~ 96 (334)
T PRK07109 80 EEELGPIDTWVNNAMVT 96 (334)
T ss_pred HHHCCCCCEEEECCCcC
Confidence 579999999864
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=3e-10 Score=110.08 Aligned_cols=81 Identities=20% Similarity=0.262 Sum_probs=69.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~-- 88 (452)
.+++|+||+|++|+.++++|+++| ++|++.+|+.++++++.+++.. ..++.++.+|++|++++.+++++
T Consensus 3 ~~vlItGas~gIG~~la~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~i~~~~~~~~ 73 (257)
T PRK07024 3 LKVFITGASSGIGQALAREYARQG-------ATLGLVARRTDALQAFAARLPK--AARVSVYAADVRDADALAAAAADFI 73 (257)
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHhccc--CCeeEEEEcCCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 7999999999998887776642 12678899999999999887764
Q ss_pred -----ccEEeecCCCCC
Q 012947 89 -----TKLLLNCVGPYR 100 (452)
Q Consensus 89 -----~dvVIn~aGp~~ 100 (452)
.|+||||+|...
T Consensus 74 ~~~g~id~lv~~ag~~~ 90 (257)
T PRK07024 74 AAHGLPDVVIANAGISV 90 (257)
T ss_pred HhCCCCCEEEECCCcCC
Confidence 699999999643
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=5.9e-10 Score=107.74 Aligned_cols=82 Identities=15% Similarity=0.091 Sum_probs=69.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~- 88 (452)
...++|+||||++|+.++++|+++| ++|++.+|++++++++.+++.. ...++.++.+|++|++++++++++
T Consensus 7 ~~~vlItGasg~iG~~la~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~ 78 (262)
T PRK13394 7 GKTAVVTGAASGIGKEIALELARAG-------AAVAIADLNQDGANAVADEINK-AGGKAIGVAMDVTNEDAVNAGIDKV 78 (262)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC-------CeEEEEeCChHHHHHHHHHHHh-cCceEEEEECCCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 7999999999888887776642 123567889999999999887764
Q ss_pred ------ccEEeecCCCC
Q 012947 89 ------TKLLLNCVGPY 99 (452)
Q Consensus 89 ------~dvVIn~aGp~ 99 (452)
+|+||||+|..
T Consensus 79 ~~~~~~~d~vi~~ag~~ 95 (262)
T PRK13394 79 AERFGSVDILVSNAGIQ 95 (262)
T ss_pred HHHcCCCCEEEECCccC
Confidence 79999999864
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.3e-09 Score=110.57 Aligned_cols=84 Identities=19% Similarity=0.190 Sum_probs=67.2
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHH-HHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQ-ALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~-l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
+..+|+|+|||||+|++++++|+++| ++|.+.+|+.++... ....+.. ...++.++.+|+.|++++.++++
T Consensus 9 ~~~~vlVTGatGfIG~~l~~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~ 80 (342)
T PLN02214 9 AGKTVCVTGAGGYIASWIVKILLERG-------YTVKGTVRNPDDPKNTHLRELEG-GKERLILCKADLQDYEALKAAID 80 (342)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCc-------CEEEEEeCCchhhhHHHHHHhhC-CCCcEEEEecCcCChHHHHHHHh
Confidence 44689999999999999999999998 799999998765322 1222211 11357788999999999999999
Q ss_pred CccEEeecCCCCC
Q 012947 88 QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ~~dvVIn~aGp~~ 100 (452)
++|+|||+|++..
T Consensus 81 ~~d~Vih~A~~~~ 93 (342)
T PLN02214 81 GCDGVFHTASPVT 93 (342)
T ss_pred cCCEEEEecCCCC
Confidence 9999999999864
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.4e-09 Score=115.85 Aligned_cols=107 Identities=18% Similarity=0.260 Sum_probs=85.3
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC--------CCCCCccEEEEeCCCHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--------SHSLSIPILTADTTDPP 80 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~--------~~~~~v~~v~~Dl~d~~ 80 (452)
....|+|+||+|+||++++++|++.| ++|++++|+.++++.+.+.+.. ....++.++.+|+.|.+
T Consensus 79 ~gKvVLVTGATGgIG~aLAr~LLk~G-------~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~e 151 (576)
T PLN03209 79 DEDLAFVAGATGKVGSRTVRELLKLG-------FRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPD 151 (576)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC-------CeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHH
Confidence 34579999999999999999999998 8999999999998777654421 00135788999999999
Q ss_pred HHHHHHcCccEEeecCCCCCCC--------------CHHHHHHHHHhCC-cEEEecC
Q 012947 81 SLHRLCSQTKLLLNCVGPYRLH--------------GDPVAAACVHSGC-DYLDISG 122 (452)
Q Consensus 81 sl~~~~~~~dvVIn~aGp~~~~--------------~~~vv~ac~~~g~-~yvDlsg 122 (452)
++.+++.++|+||||+|..... ..+++++|.+.++ ++|.++.
T Consensus 152 sI~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSS 208 (576)
T PLN03209 152 QIGPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTS 208 (576)
T ss_pred HHHHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEcc
Confidence 9999999999999999864210 1567888888876 6777764
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=4e-10 Score=110.12 Aligned_cols=77 Identities=21% Similarity=0.151 Sum_probs=66.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..++|+||||++|+.++++|+++| ++|++.+|+.++++++.+++. ++.++.+|++|+++++++++
T Consensus 6 ~~ilVtGasggiG~~la~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~ 73 (273)
T PRK07825 6 KVVAITGGARGIGLATARALAALG-------ARVAIGDLDEALAKETAAELG-----LVVGGPLDVTDPASFAAFLDAVE 73 (273)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHhc-----cceEEEccCCCHHHHHHHHHHHH
Confidence 579999999999999999999998 799999999999988777652 46788999999999877665
Q ss_pred ----CccEEeecCCCC
Q 012947 88 ----QTKLLLNCVGPY 99 (452)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (452)
.+|+||||+|..
T Consensus 74 ~~~~~id~li~~ag~~ 89 (273)
T PRK07825 74 ADLGPIDVLVNNAGVM 89 (273)
T ss_pred HHcCCCCEEEECCCcC
Confidence 469999999964
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=6.8e-10 Score=107.59 Aligned_cols=83 Identities=19% Similarity=0.161 Sum_probs=70.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~-~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++|+||+|+||+.+++.|+++| ++|++.+|+.++++++.+++... ...++.++.+|++|++++.++++
T Consensus 7 ~k~vlVtGas~gIG~~~a~~l~~~G-------~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 79 (260)
T PRK07063 7 GKVALVTGAAQGIGAAIARAFAREG-------AAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAA 79 (260)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHH
Confidence 4579999999999999999999998 79999999999988887776420 12457788999999999988876
Q ss_pred ------CccEEeecCCCC
Q 012947 88 ------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (452)
+.|+||||+|..
T Consensus 80 ~~~~~g~id~li~~ag~~ 97 (260)
T PRK07063 80 AEEAFGPLDVLVNNAGIN 97 (260)
T ss_pred HHHHhCCCcEEEECCCcC
Confidence 589999999964
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.4e-09 Score=105.89 Aligned_cols=82 Identities=15% Similarity=0.174 Sum_probs=69.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|++|++++++|+++| ++|++++|+.++++++.+.+.. ...++.++.+|++|++++.++++
T Consensus 10 ~~~vlItGasggIG~~~a~~l~~~G-------~~Vi~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 81 (263)
T PRK07814 10 DQVAVVTGAGRGLGAAIALAFAEAG-------ADVLIAARTESQLDEVAEQIRA-AGRRAHVVAADLAHPEATAGLAGQA 81 (263)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHH
Confidence 4679999999999999999999998 8999999999888877766532 12457788999999999987766
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
++|+|||+||..
T Consensus 82 ~~~~~~id~vi~~Ag~~ 98 (263)
T PRK07814 82 VEAFGRLDIVVNNVGGT 98 (263)
T ss_pred HHHcCCCCEEEECCCCC
Confidence 579999999853
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.05 E-value=7.4e-10 Score=107.10 Aligned_cols=89 Identities=11% Similarity=-0.023 Sum_probs=71.4
Q ss_pred CCCCCCCCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHH
Q 012947 1 MQAQSQIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPP 80 (452)
Q Consensus 1 ~~~~~~~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~ 80 (452)
|..|.-......++|+||+|+||+.++++|+++| .+|++++|+.++.+++.+++. .++.++.+|++|++
T Consensus 1 ~~~~~~~~~~k~vlItG~sg~IG~~~a~~l~~~g-------~~v~~~~~~~~~~~~~~~~~~----~~~~~~~~Dl~~~~ 69 (255)
T PRK05717 1 MSEPNPGHNGRVALVTGAARGIGLGIAAWLIAEG-------WQVVLADLDRERGSKVAKALG----ENAWFIAMDVADEA 69 (255)
T ss_pred CCCCCcccCCCEEEEeCCcchHHHHHHHHHHHcC-------CEEEEEcCCHHHHHHHHHHcC----CceEEEEccCCCHH
Confidence 3444444455689999999999999999999998 799999999888877666552 35778999999999
Q ss_pred HHHHHHc-------CccEEeecCCCCC
Q 012947 81 SLHRLCS-------QTKLLLNCVGPYR 100 (452)
Q Consensus 81 sl~~~~~-------~~dvVIn~aGp~~ 100 (452)
++.++++ ++|+||||+|...
T Consensus 70 ~~~~~~~~~~~~~g~id~li~~ag~~~ 96 (255)
T PRK05717 70 QVAAGVAEVLGQFGRLDALVCNAAIAD 96 (255)
T ss_pred HHHHHHHHHHHHhCCCCEEEECCCccc
Confidence 8876654 3699999998643
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=4.4e-10 Score=108.93 Aligned_cols=79 Identities=15% Similarity=0.032 Sum_probs=68.6
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc----
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~---- 87 (452)
+++|+||||++|+.++++|+++| ++|.+.+|+.++++++.+.+. ..++.++.+|++|.+++.++++
T Consensus 3 ~vlItGasg~iG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~ 72 (260)
T PRK08267 3 SIFITGAASGIGRATALLFAAEG-------WRVGAYDINEAGLAALAAELG---AGNAWTGALDVTDRAAWDAALADFAA 72 (260)
T ss_pred EEEEeCCCchHHHHHHHHHHHCC-------CeEEEEeCCHHHHHHHHHHhc---CCceEEEEecCCCHHHHHHHHHHHHH
Confidence 69999999999999999999998 799999999999988877653 3467899999999999888765
Q ss_pred ----CccEEeecCCCCC
Q 012947 88 ----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (452)
+.|+||||+|...
T Consensus 73 ~~~~~id~vi~~ag~~~ 89 (260)
T PRK08267 73 ATGGRLDVLFNNAGILR 89 (260)
T ss_pred HcCCCCCEEEECCCCCC
Confidence 3599999999643
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.05 E-value=8.9e-10 Score=107.72 Aligned_cols=76 Identities=22% Similarity=0.208 Sum_probs=66.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..++|+||+|++|+.++++|+++| ++|++.+|+.++++++.+ .++.++.+|++|+++++++++
T Consensus 4 k~vlItGasggiG~~la~~l~~~G-------~~V~~~~r~~~~l~~~~~-------~~~~~~~~Dv~~~~~~~~~~~~~~ 69 (273)
T PRK06182 4 KVALVTGASSGIGKATARRLAAQG-------YTVYGAARRVDKMEDLAS-------LGVHPLSLDVTDEASIKAAVDTII 69 (273)
T ss_pred CEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHh-------CCCeEEEeeCCCHHHHHHHHHHHH
Confidence 579999999999999999999988 799999999988866543 247889999999999988887
Q ss_pred ----CccEEeecCCCCC
Q 012947 88 ----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (452)
++|+||||+|...
T Consensus 70 ~~~~~id~li~~ag~~~ 86 (273)
T PRK06182 70 AEEGRIDVLVNNAGYGS 86 (273)
T ss_pred HhcCCCCEEEECCCcCC
Confidence 6899999999643
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.3e-09 Score=108.22 Aligned_cols=82 Identities=16% Similarity=0.086 Sum_probs=69.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|++|+.++++|+++| ++|++.+|+.++++++.++++. ...+..+.+|++|+++++++++
T Consensus 9 gk~vlItGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~l~~~~~~l~~--~~~~~~~~~Dv~d~~~v~~~~~~~ 79 (296)
T PRK05872 9 GKVVVVTGAARGIGAELARRLHARG-------AKLALVDLEEAELAALAAELGG--DDRVLTVVADVTDLAAMQAAAEEA 79 (296)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhcC--CCcEEEEEecCCCHHHHHHHHHHH
Confidence 4689999999999999999999998 7999999999999988887742 2345566799999999988765
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
..|+||||+|...
T Consensus 80 ~~~~g~id~vI~nAG~~~ 97 (296)
T PRK05872 80 VERFGGIDVVVANAGIAS 97 (296)
T ss_pred HHHcCCCCEEEECCCcCC
Confidence 4799999999643
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.2e-09 Score=105.76 Aligned_cols=79 Identities=19% Similarity=0.194 Sum_probs=69.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|++|+.++++|+++| ++|++++|+.++++++.+++. .++.++.+|++|+++++++++
T Consensus 6 ~~~vlItGas~~iG~~ia~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~ 74 (257)
T PRK07067 6 GKVALLTGAASGIGEAVAERYLAEG-------ARVVIADIKPARARLAALEIG----PAAIAVSLDVTRQDSIDRIVAAA 74 (257)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcC-------CEEEEEcCCHHHHHHHHHHhC----CceEEEEccCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 899999999999888877653 357788999999999988876
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
+.|+||||+|..
T Consensus 75 ~~~~~~id~li~~ag~~ 91 (257)
T PRK07067 75 VERFGGIDILFNNAALF 91 (257)
T ss_pred HHHcCCCCEEEECCCcC
Confidence 479999999864
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=3.9e-10 Score=109.92 Aligned_cols=75 Identities=21% Similarity=0.221 Sum_probs=64.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~- 88 (452)
...++|+||||++|+.++++|+++| ++|++.+|+.++++. ..++.++.+|++|++++++++++
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g-------~~V~~~~r~~~~~~~---------~~~~~~~~~D~~d~~~~~~~~~~~ 67 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAG-------YRVFGTSRNPARAAP---------IPGVELLELDVTDDASVQAAVDEV 67 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCC-------CEEEEEeCChhhccc---------cCCCeeEEeecCCHHHHHHHHHHH
Confidence 3579999999999999999999998 799999999876532 23578899999999999998874
Q ss_pred ------ccEEeecCCCCC
Q 012947 89 ------TKLLLNCVGPYR 100 (452)
Q Consensus 89 ------~dvVIn~aGp~~ 100 (452)
.|+||||+|...
T Consensus 68 ~~~~g~~d~li~~ag~~~ 85 (270)
T PRK06179 68 IARAGRIDVLVNNAGVGL 85 (270)
T ss_pred HHhCCCCCEEEECCCCCC
Confidence 699999999753
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.04 E-value=8.7e-10 Score=108.95 Aligned_cols=79 Identities=27% Similarity=0.352 Sum_probs=62.0
Q ss_pred EEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHH-HHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCccEE
Q 012947 14 IILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVK-QALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKLL 92 (452)
Q Consensus 14 lV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~-~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~dvV 92 (452)
|||||+||+|++++++|+++++ ..+|.+.+|+..... ..... .....++.+|++|++++.++++++|+|
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~-----~~~Vr~~d~~~~~~~~~~~~~-----~~~~~~~~~Di~d~~~l~~a~~g~d~V 70 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGY-----IYEVRVLDRSPPPKFLKDLQK-----SGVKEYIQGDITDPESLEEALEGVDVV 70 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCC-----ceEEEEcccccccccchhhhc-----ccceeEEEeccccHHHHHHHhcCCceE
Confidence 6999999999999999999983 268888888765432 11121 122348999999999999999999999
Q ss_pred eecCCCCCCC
Q 012947 93 LNCVGPYRLH 102 (452)
Q Consensus 93 In~aGp~~~~ 102 (452)
||+|++....
T Consensus 71 ~H~Aa~~~~~ 80 (280)
T PF01073_consen 71 FHTAAPVPPW 80 (280)
T ss_pred EEeCcccccc
Confidence 9999876443
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=6.3e-10 Score=107.43 Aligned_cols=82 Identities=17% Similarity=0.199 Sum_probs=67.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
+.++|+||++++|+.++++|+ ++ .+|++++|+.++++++.+++.......+.++.+|++|+++++++++
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g-------~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 72 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HG-------EDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQ 72 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CC-------CEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHH
Confidence 368999999999999999998 47 7999999999999988877742111246788999999999887765
Q ss_pred ----CccEEeecCCCCC
Q 012947 88 ----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (452)
+.|++|||+|.+.
T Consensus 73 ~~~g~id~lv~nag~~~ 89 (246)
T PRK05599 73 ELAGEISLAVVAFGILG 89 (246)
T ss_pred HhcCCCCEEEEecCcCC
Confidence 4799999999753
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=7.2e-10 Score=108.76 Aligned_cols=78 Identities=17% Similarity=0.063 Sum_probs=67.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..++|+||+|++|++++++|+++| ++|++++|+.++++.+.+.. ..++..+.+|++|++++.++++
T Consensus 5 ~~vlVtGasggiG~~la~~l~~~G-------~~V~~~~r~~~~~~~l~~~~----~~~~~~~~~D~~d~~~~~~~~~~~~ 73 (277)
T PRK06180 5 KTWLITGVSSGFGRALAQAALAAG-------HRVVGTVRSEAARADFEALH----PDRALARLLDVTDFDAIDAVVADAE 73 (277)
T ss_pred CEEEEecCCChHHHHHHHHHHhCc-------CEEEEEeCCHHHHHHHHhhc----CCCeeEEEccCCCHHHHHHHHHHHH
Confidence 469999999999999999999998 79999999999887766543 2467788999999999988877
Q ss_pred ----CccEEeecCCCC
Q 012947 88 ----QTKLLLNCVGPY 99 (452)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (452)
++|+||||+|..
T Consensus 74 ~~~~~~d~vv~~ag~~ 89 (277)
T PRK06180 74 ATFGPIDVLVNNAGYG 89 (277)
T ss_pred HHhCCCCEEEECCCcc
Confidence 479999999964
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=7.3e-10 Score=106.41 Aligned_cols=82 Identities=18% Similarity=0.192 Sum_probs=68.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHc--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~-~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..++|+||+|++|+.++++|++++ .+|++.+|+.++++++.+++... ...++.++.+|++|++++.++++
T Consensus 3 k~vlItGas~giG~~la~~l~~~g-------~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 75 (248)
T PRK08251 3 QKILITGASSGLGAGMAREFAAKG-------RDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEF 75 (248)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHH
Confidence 479999999999999999999998 79999999999888776655321 13467888999999999887766
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
++|+||||+|..
T Consensus 76 ~~~~~~id~vi~~ag~~ 92 (248)
T PRK08251 76 RDELGGLDRVIVNAGIG 92 (248)
T ss_pred HHHcCCCCEEEECCCcC
Confidence 579999999854
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=8.5e-10 Score=106.52 Aligned_cols=82 Identities=17% Similarity=0.128 Sum_probs=70.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|++|+.++++|+++| ++|++++|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 6 ~k~~lItGas~giG~~ia~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 77 (254)
T PRK07478 6 GKVAIITGASSGIGRAAAKLFAREG-------AKVVVGARRQAELDQLVAEIRA-EGGEAVALAGDVRDEAYAKALVALA 77 (254)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 7999999999998888776642 12467788999999999988876
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
+.|+||||||..
T Consensus 78 ~~~~~~id~li~~ag~~ 94 (254)
T PRK07478 78 VERFGGLDIAFNNAGTL 94 (254)
T ss_pred HHhcCCCCEEEECCCCC
Confidence 579999999964
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.03 E-value=8.4e-10 Score=106.61 Aligned_cols=81 Identities=15% Similarity=0.097 Sum_probs=68.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..++|+||+|++|+.++++|+++| ++|++.+|+.++++++..++.. ...++.++.+|++|+++++++++
T Consensus 3 k~~lItGas~giG~~la~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~ 74 (256)
T PRK08643 3 KVALVTGAGQGIGFAIAKRLVEDG-------FKVAIVDYNEETAQAAADKLSK-DGGKAIAVKADVSDRDQVFAAVRQVV 74 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 379999999999999999999998 7999999999888777766632 12456788999999999888776
Q ss_pred ----CccEEeecCCCC
Q 012947 88 ----QTKLLLNCVGPY 99 (452)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (452)
++|+||||+|..
T Consensus 75 ~~~~~id~vi~~ag~~ 90 (256)
T PRK08643 75 DTFGDLNVVVNNAGVA 90 (256)
T ss_pred HHcCCCCEEEECCCCC
Confidence 479999999864
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.2e-09 Score=104.58 Aligned_cols=82 Identities=20% Similarity=0.150 Sum_probs=69.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..++|+||+|++|+.++++|+++| ++|++++|+.++++++.+++.. ...++.++.+|++|++++.++++
T Consensus 7 k~vlItG~sg~iG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~ 78 (241)
T PRK07454 7 PRALITGASSGIGKATALAFAKAG-------WDLALVARSQDALEALAAELRS-TGVKAAAYSIDLSNPEAIAPGIAELL 78 (241)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-CCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 579999999999999999999998 7999999999888777665532 12467789999999999888776
Q ss_pred ----CccEEeecCCCCC
Q 012947 88 ----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (452)
++|+||||+|...
T Consensus 79 ~~~~~id~lv~~ag~~~ 95 (241)
T PRK07454 79 EQFGCPDVLINNAGMAY 95 (241)
T ss_pred HHcCCCCEEEECCCccC
Confidence 4799999999653
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=1e-09 Score=106.77 Aligned_cols=79 Identities=16% Similarity=0.198 Sum_probs=69.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||||++|+.++++|+++| ++|++.+|+.++++++.++++ .++.++.+|++|++++.++++
T Consensus 6 ~k~vlItGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dl~~~~~~~~~~~~~ 74 (261)
T PRK08265 6 GKVAIVTGGATLIGAAVARALVAAG-------ARVAIVDIDADNGAAVAASLG----ERARFIATDITDDAAIERAVATV 74 (261)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhC----CeeEEEEecCCCHHHHHHHHHHH
Confidence 3589999999999999999999998 899999999998888877653 467889999999999988776
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
..|+||||+|..
T Consensus 75 ~~~~g~id~lv~~ag~~ 91 (261)
T PRK08265 75 VARFGRVDILVNLACTY 91 (261)
T ss_pred HHHhCCCCEEEECCCCC
Confidence 469999999964
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.03 E-value=2.9e-09 Score=108.30 Aligned_cols=90 Identities=14% Similarity=0.204 Sum_probs=74.4
Q ss_pred CCCCCCCCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHH
Q 012947 1 MQAQSQIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPP 80 (452)
Q Consensus 1 ~~~~~~~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~ 80 (452)
|.........++|+|+||+||+|++++++|+++| ++|++.+|+.++.+.+...+. ...++.++.+|+.|.+
T Consensus 1 ~~~~~~~~~~~~vLVtG~~GfIG~~l~~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~ 71 (353)
T PLN02896 1 MELEGRESATGTYCVTGATGYIGSWLVKLLLQRG-------YTVHATLRDPAKSLHLLSKWK--EGDRLRLFRADLQEEG 71 (353)
T ss_pred CCccccccCCCEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCChHHHHHHHHhhc--cCCeEEEEECCCCCHH
Confidence 3444455567899999999999999999999998 799999999887766655542 1245788999999999
Q ss_pred HHHHHHcCccEEeecCCCC
Q 012947 81 SLHRLCSQTKLLLNCVGPY 99 (452)
Q Consensus 81 sl~~~~~~~dvVIn~aGp~ 99 (452)
.+.++++++|+|||+|+..
T Consensus 72 ~~~~~~~~~d~Vih~A~~~ 90 (353)
T PLN02896 72 SFDEAVKGCDGVFHVAASM 90 (353)
T ss_pred HHHHHHcCCCEEEECCccc
Confidence 9999999999999999864
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=8.9e-10 Score=107.56 Aligned_cols=81 Identities=21% Similarity=0.137 Sum_probs=69.1
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc----
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~---- 87 (452)
+++|+||||++|+.++++|+++| .+|++.+|+.++++++.+++.. ...++.++.+|++|++++.++++
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g-------~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~ 73 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREG-------WRLALADVNEEGGEETLKLLRE-AGGDGFYQRCDVRDYSQLTALAQACEE 73 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 69999999999999999999998 7999999999998887776642 23467788999999999888775
Q ss_pred ---CccEEeecCCCCC
Q 012947 88 ---QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ---~~dvVIn~aGp~~ 100 (452)
+.|+||||+|...
T Consensus 74 ~~~~id~lI~~ag~~~ 89 (270)
T PRK05650 74 KWGGIDVIVNNAGVAS 89 (270)
T ss_pred HcCCCCEEEECCCCCC
Confidence 5899999999653
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=8.3e-10 Score=109.62 Aligned_cols=82 Identities=13% Similarity=0.145 Sum_probs=70.1
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..++|+||+|++|+.+++.|+++| ++|++++|+.++++++.+++.. ...++.++.+|++|++++.++++
T Consensus 41 k~vlItGasggIG~~la~~La~~G-------~~Vi~~~R~~~~l~~~~~~l~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~ 112 (293)
T PRK05866 41 KRILLTGASSGIGEAAAEQFARRG-------ATVVAVARREDLLDAVADRITR-AGGDAMAVPCDLSDLDAVDALVADVE 112 (293)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 579999999999999999999998 8999999999998887776631 12356788999999999988887
Q ss_pred ----CccEEeecCCCCC
Q 012947 88 ----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (452)
+.|+||||+|...
T Consensus 113 ~~~g~id~li~~AG~~~ 129 (293)
T PRK05866 113 KRIGGVDILINNAGRSI 129 (293)
T ss_pred HHcCCCCEEEECCCCCC
Confidence 6899999999653
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=9.8e-10 Score=106.15 Aligned_cols=84 Identities=20% Similarity=0.207 Sum_probs=70.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
...+++|+||+|++|+.++++|+++| ++|++.+|++++++++.+.+.. .+.++.++.+|++|++++++++++
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~i~~-~~~~~~~~~~D~~~~~~~~~~~~~ 80 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAG-------AEVILNGRDPAKLAAAAESLKG-QGLSAHALAFDVTDHDAVRAAIDA 80 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHHHh-cCceEEEEEccCCCHHHHHHHHHH
Confidence 34689999999999999999999998 8999999999988877776642 123577889999999999988764
Q ss_pred -------ccEEeecCCCCC
Q 012947 89 -------TKLLLNCVGPYR 100 (452)
Q Consensus 89 -------~dvVIn~aGp~~ 100 (452)
.|+|||++|...
T Consensus 81 ~~~~~~~~d~li~~ag~~~ 99 (255)
T PRK07523 81 FEAEIGPIDILVNNAGMQF 99 (255)
T ss_pred HHHhcCCCCEEEECCCCCC
Confidence 799999998653
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.6e-09 Score=104.28 Aligned_cols=82 Identities=16% Similarity=0.066 Sum_probs=69.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
.+++|+||||++|++++++|+++| ++|++.+|+.++++++.+++.. ...++.++.+|++|++++.++++
T Consensus 5 ~~vlItG~sg~iG~~la~~l~~~g-------~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~ 76 (258)
T PRK12429 5 KVALVTGAASGIGLEIALALAKEG-------AKVVIADLNDEAAAAAAEALQK-AGGKAIGVAMDVTDEEAINAGIDYAV 76 (258)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-------CeEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 579999999999999999999998 7999999999988877666532 13467789999999999988876
Q ss_pred ----CccEEeecCCCCC
Q 012947 88 ----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (452)
.+|+||||+|...
T Consensus 77 ~~~~~~d~vi~~a~~~~ 93 (258)
T PRK12429 77 ETFGGVDILVNNAGIQH 93 (258)
T ss_pred HHcCCCCEEEECCCCCC
Confidence 5799999998543
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=7.5e-10 Score=108.33 Aligned_cols=79 Identities=18% Similarity=0.146 Sum_probs=68.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..++|+||+|++|++++++|+++| ++|++..|+.++++.+.+.. ..++.++.+|++|.+++.++++
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g-------~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~ 71 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARG-------DRVAATVRRPDALDDLKARY----GDRLWVLQLDVTDSAAVRAVVDRAF 71 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHhc----cCceEEEEccCCCHHHHHHHHHHHH
Confidence 469999999999999999999998 79999999998888776654 2467889999999999988765
Q ss_pred ----CccEEeecCCCCC
Q 012947 88 ----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (452)
++|+||||+|...
T Consensus 72 ~~~~~id~vi~~ag~~~ 88 (276)
T PRK06482 72 AALGRIDVVVSNAGYGL 88 (276)
T ss_pred HHcCCCCEEEECCCCCC
Confidence 4799999999653
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=7.2e-10 Score=108.85 Aligned_cols=75 Identities=19% Similarity=0.147 Sum_probs=64.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..++|+||+|++|+.+++.|+++| ++|++++|+.++++++.+ ..+.++.+|++|+++++++++
T Consensus 5 k~vlItGasggiG~~la~~l~~~G-------~~Vi~~~r~~~~~~~l~~-------~~~~~~~~Dl~d~~~~~~~~~~~~ 70 (277)
T PRK05993 5 RSILITGCSSGIGAYCARALQSDG-------WRVFATCRKEEDVAALEA-------EGLEAFQLDYAEPESIAALVAQVL 70 (277)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHH-------CCceEEEccCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 799999999998876543 246788999999998887765
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
..|+||||+|..
T Consensus 71 ~~~~g~id~li~~Ag~~ 87 (277)
T PRK05993 71 ELSGGRLDALFNNGAYG 87 (277)
T ss_pred HHcCCCccEEEECCCcC
Confidence 469999999854
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.02 E-value=8.7e-10 Score=108.10 Aligned_cols=81 Identities=12% Similarity=0.074 Sum_probs=70.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|+||++++++|+++| ++|++++|+.++.+++.+++. ...++.++.+|++|+++++++++
T Consensus 18 ~k~~lItGas~gIG~~la~~l~~~G-------~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~ 88 (280)
T PLN02253 18 GKVALVTGGATGIGESIVRLFHKHG-------AKVCIVDLQDDLGQNVCDSLG--GEPNVCFFHCDVTVEDDVSRAVDFT 88 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHhc--CCCceEEEEeecCCHHHHHHHHHHH
Confidence 4579999999999999999999998 899999999888887777664 13467889999999999988877
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
++|+||||||..
T Consensus 89 ~~~~g~id~li~~Ag~~ 105 (280)
T PLN02253 89 VDKFGTLDIMVNNAGLT 105 (280)
T ss_pred HHHhCCCCEEEECCCcC
Confidence 589999999864
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.2e-09 Score=109.39 Aligned_cols=84 Identities=19% Similarity=0.152 Sum_probs=70.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~-~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++|+|||++||+.++++|+++| ++|++++|+.++++++.+++... ...++.++.+|++|.++++++++
T Consensus 14 gk~~lITGas~GIG~~~a~~La~~G-------~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~ 86 (313)
T PRK05854 14 GKRAVVTGASDGLGLGLARRLAAAG-------AEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQ 86 (313)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHH
Confidence 4689999999999999999999998 89999999999988877766321 12357789999999999988876
Q ss_pred ------CccEEeecCCCCC
Q 012947 88 ------QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (452)
+.|+||||||...
T Consensus 87 ~~~~~~~iD~li~nAG~~~ 105 (313)
T PRK05854 87 LRAEGRPIHLLINNAGVMT 105 (313)
T ss_pred HHHhCCCccEEEECCcccc
Confidence 3799999999653
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.02 E-value=9e-10 Score=118.49 Aligned_cols=84 Identities=10% Similarity=0.067 Sum_probs=71.1
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
+...++|+||+|++|+.++++|+++| ++|++++|+.++++++.+++.. ...++.++.+|++|++++.+++++
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~~~~~~~~ 385 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREG-------AEVVASDIDEAAAERTAELIRA-AGAVAHAYRVDVSDADAMEAFAEW 385 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHH
Confidence 45679999999999999999999998 7999999999998887776632 124678899999999999888763
Q ss_pred -------ccEEeecCCCCC
Q 012947 89 -------TKLLLNCVGPYR 100 (452)
Q Consensus 89 -------~dvVIn~aGp~~ 100 (452)
.|+||||||...
T Consensus 386 ~~~~~g~id~lv~~Ag~~~ 404 (582)
T PRK05855 386 VRAEHGVPDIVVNNAGIGM 404 (582)
T ss_pred HHHhcCCCcEEEECCccCC
Confidence 799999999753
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.02 E-value=2.4e-09 Score=106.99 Aligned_cols=84 Identities=15% Similarity=0.227 Sum_probs=66.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~-~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
..+|+|+|||||+|++++++|+++| ++|.+..|+.++.......... ....++.++.+|+.|++++.+++++
T Consensus 4 ~~~ilVtGatGfIG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 76 (322)
T PLN02662 4 GKVVCVTGASGYIASWLVKLLLQRG-------YTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDG 76 (322)
T ss_pred CCEEEEECChHHHHHHHHHHHHHCC-------CEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcC
Confidence 4689999999999999999999998 7999999987653322111100 0123678899999999999999999
Q ss_pred ccEEeecCCCCC
Q 012947 89 TKLLLNCVGPYR 100 (452)
Q Consensus 89 ~dvVIn~aGp~~ 100 (452)
+|+|||+|++..
T Consensus 77 ~d~Vih~A~~~~ 88 (322)
T PLN02662 77 CEGVFHTASPFY 88 (322)
T ss_pred CCEEEEeCCccc
Confidence 999999998753
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.4e-09 Score=106.63 Aligned_cols=90 Identities=18% Similarity=0.190 Sum_probs=70.9
Q ss_pred CCCCCCCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHH
Q 012947 2 QAQSQIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPS 81 (452)
Q Consensus 2 ~~~~~~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~s 81 (452)
..+..+..+..++|+||+|++|++++++|+++| ++|++++|+.++++++.+++.. ...++.++.+|++|+++
T Consensus 2 ~~~~~~~~~~~vlVtGa~g~iG~~la~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~ 73 (274)
T PRK07775 2 PRFEPHPDRRPALVAGASSGIGAATAIELAAAG-------FPVALGARRVEKCEELVDKIRA-DGGEAVAFPLDVTDPDS 73 (274)
T ss_pred CCCCCCCCCCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEECCCCCHHH
Confidence 333333334689999999999999999999998 7999999998887776655421 12356788899999999
Q ss_pred HHHHHc-------CccEEeecCCCC
Q 012947 82 LHRLCS-------QTKLLLNCVGPY 99 (452)
Q Consensus 82 l~~~~~-------~~dvVIn~aGp~ 99 (452)
+.++++ +.|+||||+|..
T Consensus 74 ~~~~~~~~~~~~~~id~vi~~Ag~~ 98 (274)
T PRK07775 74 VKSFVAQAEEALGEIEVLVSGAGDT 98 (274)
T ss_pred HHHHHHHHHHhcCCCCEEEECCCcC
Confidence 988776 569999999854
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.01 E-value=1e-09 Score=110.23 Aligned_cols=82 Identities=27% Similarity=0.208 Sum_probs=70.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~- 88 (452)
...++|+||+|+||+.+++.|+++| ++|++++|+.++++++.+++.. ...++.++.+|++|.++++++++.
T Consensus 6 ~k~vlVTGas~gIG~~~a~~L~~~G-------~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~v~~~~~~~ 77 (322)
T PRK07453 6 KGTVIITGASSGVGLYAAKALAKRG-------WHVIMACRNLKKAEAAAQELGI-PPDSYTIIHIDLGDLDSVRRFVDDF 77 (322)
T ss_pred CCEEEEEcCCChHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHhhc-cCCceEEEEecCCCHHHHHHHHHHH
Confidence 4579999999999999999999998 7999999999999888877642 124678889999999999888763
Q ss_pred ------ccEEeecCCCC
Q 012947 89 ------TKLLLNCVGPY 99 (452)
Q Consensus 89 ------~dvVIn~aGp~ 99 (452)
+|+||||||..
T Consensus 78 ~~~~~~iD~li~nAg~~ 94 (322)
T PRK07453 78 RALGKPLDALVCNAAVY 94 (322)
T ss_pred HHhCCCccEEEECCccc
Confidence 89999999964
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.5e-09 Score=104.76 Aligned_cols=83 Identities=17% Similarity=0.160 Sum_probs=69.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
....++|+||+|+||+.++++|+++| ++|++.+|+.++++++.+++.. ...++.++.+|++|++++.++++
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~ 81 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAG-------AHVLVNGRNAATLEAAVAALRA-AGGAAEALAFDIADEEAVAAAFAR 81 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcC-------CeEEEEeCCHHHHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHH
Confidence 45689999999999999999999998 8999999999888877766632 23457889999999999888776
Q ss_pred ------CccEEeecCCCC
Q 012947 88 ------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (452)
+.|+||||+|..
T Consensus 82 ~~~~~~~id~vi~~ag~~ 99 (256)
T PRK06124 82 IDAEHGRLDILVNNVGAR 99 (256)
T ss_pred HHHhcCCCCEEEECCCCC
Confidence 458999999964
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=1e-09 Score=106.47 Aligned_cols=86 Identities=15% Similarity=0.179 Sum_probs=68.5
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhH-HHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR-VKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~k-l~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
....++|+||+|++|+.++++|++++. ++|++.+|+.++ ++++.+++......++.++.+|++|++++.+.++
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg------~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~ 80 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAP------ARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVID 80 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCC------CeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHH
Confidence 345799999999999999999999852 799999999886 7777766642112367889999999988766554
Q ss_pred ------CccEEeecCCCCC
Q 012947 88 ------QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (452)
+.|++||++|...
T Consensus 81 ~~~~~g~id~li~~ag~~~ 99 (253)
T PRK07904 81 AAFAGGDVDVAIVAFGLLG 99 (253)
T ss_pred HHHhcCCCCEEEEeeecCC
Confidence 6899999998653
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=9.9e-10 Score=105.92 Aligned_cols=82 Identities=12% Similarity=0.086 Sum_probs=69.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~- 88 (452)
...++|+||+|++|+.++++|+++| .+|++++|+.++++++.+++.. ...++..+.+|++|++++.+++++
T Consensus 7 ~k~ilItGas~~iG~~ia~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~i~~~~~~~ 78 (253)
T PRK06172 7 GKVALVTGGAAGIGRATALAFAREG-------AKVVVADRDAAGGEETVALIRE-AGGEALFVACDVTRDAEVKALVEQT 78 (253)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHH
Confidence 4689999999999999999999998 7999999999888777666532 234678899999999999888764
Q ss_pred ------ccEEeecCCCC
Q 012947 89 ------TKLLLNCVGPY 99 (452)
Q Consensus 89 ------~dvVIn~aGp~ 99 (452)
.|+||||+|..
T Consensus 79 ~~~~g~id~li~~ag~~ 95 (253)
T PRK06172 79 IAAYGRLDYAFNNAGIE 95 (253)
T ss_pred HHHhCCCCEEEECCCCC
Confidence 59999999864
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=9.9e-10 Score=106.76 Aligned_cols=83 Identities=19% Similarity=0.185 Sum_probs=68.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~-~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++|+||+|++|+.+++.|+++| ++|++++|+.+++++..+++... ...++..+.+|++|+++++++++
T Consensus 8 ~k~~lItGas~giG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 80 (265)
T PRK07062 8 GRVAVVTGGSSGIGLATVELLLEAG-------ASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAA 80 (265)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHH
Confidence 4579999999999999999999998 79999999999888777665321 12356788999999999988765
Q ss_pred ------CccEEeecCCCC
Q 012947 88 ------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (452)
+.|+||||||..
T Consensus 81 ~~~~~g~id~li~~Ag~~ 98 (265)
T PRK07062 81 VEARFGGVDMLVNNAGQG 98 (265)
T ss_pred HHHhcCCCCEEEECCCCC
Confidence 469999999964
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.00 E-value=3.2e-09 Score=106.37 Aligned_cols=83 Identities=17% Similarity=0.185 Sum_probs=67.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~-~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
..+|+|+|||||+|++++++|+++| ++|.+..|+.++.+.+.+.... ....++.++.+|++|++++.+++++
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 77 (322)
T PLN02986 5 GKLVCVTGASGYIASWIVKLLLLRG-------YTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEG 77 (322)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhC
Confidence 4689999999999999999999998 7999899987654433222110 0124678899999999999999999
Q ss_pred ccEEeecCCCC
Q 012947 89 TKLLLNCVGPY 99 (452)
Q Consensus 89 ~dvVIn~aGp~ 99 (452)
+|+|||+|++.
T Consensus 78 ~d~vih~A~~~ 88 (322)
T PLN02986 78 CDAVFHTASPV 88 (322)
T ss_pred CCEEEEeCCCc
Confidence 99999999975
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=3.2e-09 Score=103.11 Aligned_cols=79 Identities=15% Similarity=0.140 Sum_probs=68.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|+||+.++++|+++| ++|++.+|+.++++++.+++. .++.++.+|++|+++++++++
T Consensus 6 ~k~vlVtGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~ 74 (263)
T PRK06200 6 GQVALITGGGSGIGRALVERFLAEG-------ARVAVLERSAEKLASLRQRFG----DHVLVVEGDVTSYADNQRAVDQT 74 (263)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhC----CcceEEEccCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 799999999999888877652 357889999999999888775
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
+.|+||||+|..
T Consensus 75 ~~~~g~id~li~~ag~~ 91 (263)
T PRK06200 75 VDAFGKLDCFVGNAGIW 91 (263)
T ss_pred HHhcCCCCEEEECCCCc
Confidence 579999999964
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=98.99 E-value=3.2e-09 Score=107.51 Aligned_cols=81 Identities=17% Similarity=0.210 Sum_probs=62.9
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh-----HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-----RVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~-----kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
+|+|||||||||++++++|++.| ++|++++|+.+ .++.+.+........++.++.+|+.|.+++.+++
T Consensus 2 ~vlVTGatGfIG~~l~~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~ 74 (343)
T TIGR01472 2 IALITGITGQDGSYLAEFLLEKG-------YEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRII 74 (343)
T ss_pred eEEEEcCCCcHHHHHHHHHHHCC-------CEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHH
Confidence 79999999999999999999998 79999999754 2332222110000235789999999999999999
Q ss_pred cC--ccEEeecCCCC
Q 012947 87 SQ--TKLLLNCVGPY 99 (452)
Q Consensus 87 ~~--~dvVIn~aGp~ 99 (452)
++ +|+|||+|+..
T Consensus 75 ~~~~~d~ViH~Aa~~ 89 (343)
T TIGR01472 75 DEIKPTEIYNLAAQS 89 (343)
T ss_pred HhCCCCEEEECCccc
Confidence 85 69999999864
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=3.3e-09 Score=102.37 Aligned_cols=82 Identities=20% Similarity=0.154 Sum_probs=69.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..+++|+||+|++|++++++|+++| ++|++++|+.++++++.+++.. ...++.++.+|++|++++.++++
T Consensus 9 ~k~ilItGasg~IG~~~a~~l~~~G-------~~Vi~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (258)
T PRK06949 9 GKVALVTGASSGLGARFAQVLAQAG-------AKVVLASRRVERLKELRAEIEA-EGGAAHVVSLDVTDYQSIKAAVAHA 80 (258)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHH
Confidence 4689999999999999999999998 7999999999998887766531 12457889999999999988876
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
++|+||||+|..
T Consensus 81 ~~~~~~~d~li~~ag~~ 97 (258)
T PRK06949 81 ETEAGTIDILVNNSGVS 97 (258)
T ss_pred HHhcCCCCEEEECCCCC
Confidence 479999999964
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=3.5e-09 Score=102.48 Aligned_cols=112 Identities=13% Similarity=0.078 Sum_probs=76.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh-HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~-kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++|+||+++||+.+++.|+++| ++|++.+|+.. ++.+..++. ..++.++.+|++|+++++++++
T Consensus 8 ~k~~lItGas~gIG~aia~~l~~~G-------~~vv~~~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~ 76 (251)
T PRK12481 8 GKVAIITGCNTGLGQGMAIGLAKAG-------ADIVGVGVAEAPETQAQVEAL----GRKFHFITADLIQQKDIDSIVSQ 76 (251)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CEEEEecCchHHHHHHHHHHc----CCeEEEEEeCCCCHHHHHHHHHH
Confidence 3579999999999999999999998 89999998653 333333332 3467889999999999988876
Q ss_pred ------CccEEeecCCCCCCCCHHHHH--HHHHhCCcEEEecCcHHHHHHHHHHH
Q 012947 88 ------QTKLLLNCVGPYRLHGDPVAA--ACVHSGCDYLDISGEPEFMERMEARY 134 (452)
Q Consensus 88 ------~~dvVIn~aGp~~~~~~~vv~--ac~~~g~~yvDlsge~~~~~~~~~~~ 134 (452)
+.|++|||+|..... ++.+ ...-..+.-+++.+.....+...+.+
T Consensus 77 ~~~~~g~iD~lv~~ag~~~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~ 129 (251)
T PRK12481 77 AVEVMGHIDILINNAGIIRRQ--DLLEFGNKDWDDVININQKTVFFLSQAVAKQF 129 (251)
T ss_pred HHHHcCCCCEEEECCCcCCCC--CcccCCHHHHHHHheeCcHHHHHHHHHHHHHH
Confidence 479999999965321 1111 11111233455555555556554444
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=98.99 E-value=2e-09 Score=103.07 Aligned_cols=83 Identities=10% Similarity=0.047 Sum_probs=69.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..+++|+||+|++|+.++++|+++| ++|++.+|+.++++...+++.. ...++.++.+|++|++++.++++
T Consensus 6 ~~~ilItGasg~iG~~l~~~l~~~g-------~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~~~~~~~~~ 77 (251)
T PRK12826 6 GRVALVTGAARGIGRAIAVRLAADG-------AEVIVVDICGDDAAATAELVEA-AGGKARARQVDVRDRAALKAAVAAG 77 (251)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHH
Confidence 4579999999999999999999998 7999999998887776665532 12357889999999999998876
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
++|+|||++|...
T Consensus 78 ~~~~~~~d~vi~~ag~~~ 95 (251)
T PRK12826 78 VEDFGRLDILVANAGIFP 95 (251)
T ss_pred HHHhCCCCEEEECCCCCC
Confidence 6899999998654
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=2e-09 Score=103.89 Aligned_cols=80 Identities=19% Similarity=0.155 Sum_probs=68.0
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-Ccc
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-QTK 90 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-~~d 90 (452)
.++|+||||++|+.++++|++.| ++|++.+|+.++++++.+.... ...++.++.+|++|++++.+++. ++|
T Consensus 4 ~vlVtGasg~iG~~ia~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~id 75 (257)
T PRK09291 4 TILITGAGSGFGREVALRLARKG-------HNVIAGVQIAPQVTALRAEAAR-RGLALRVEKLDLTDAIDRAQAAEWDVD 75 (257)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCcceEEEeeCCCHHHHHHHhcCCCC
Confidence 69999999999999999999998 7999999998887766554421 12457889999999999999887 899
Q ss_pred EEeecCCCC
Q 012947 91 LLLNCVGPY 99 (452)
Q Consensus 91 vVIn~aGp~ 99 (452)
+||||+|..
T Consensus 76 ~vi~~ag~~ 84 (257)
T PRK09291 76 VLLNNAGIG 84 (257)
T ss_pred EEEECCCcC
Confidence 999999864
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.2e-09 Score=106.99 Aligned_cols=79 Identities=18% Similarity=0.106 Sum_probs=67.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..++|+||+|++|+.++++|++++ ++|++++|+.++++++.+.+. ..+.++.+|++|++++.++++
T Consensus 4 k~vlItGasg~iG~~~a~~l~~~g-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~ 72 (275)
T PRK08263 4 KVWFITGASRGFGRAWTEAALERG-------DRVVATARDTATLADLAEKYG----DRLLPLALDVTDRAAVFAAVETAV 72 (275)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHhcc----CCeeEEEccCCCHHHHHHHHHHHH
Confidence 379999999999999999999998 799999999999887766542 457788999999999988776
Q ss_pred ----CccEEeecCCCCC
Q 012947 88 ----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (452)
++|+||||+|...
T Consensus 73 ~~~~~~d~vi~~ag~~~ 89 (275)
T PRK08263 73 EHFGRLDIVVNNAGYGL 89 (275)
T ss_pred HHcCCCCEEEECCCCcc
Confidence 4699999999653
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=2.3e-09 Score=102.02 Aligned_cols=76 Identities=18% Similarity=0.271 Sum_probs=66.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
++++|+||+|++|+.+++.|+++| ++|++.+|+.++++++.+++ ++.++.+|++|+++++++++
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g-------~~v~~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~v~~~~~~~~ 67 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDG-------HKVTLVGARRDDLEVAAKEL------DVDAIVCDNTDPASLEEARGLFP 67 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHhc------cCcEEecCCCCHHHHHHHHHHHh
Confidence 369999999999999999999988 79999999999988777654 35688999999999998876
Q ss_pred -CccEEeecCCCC
Q 012947 88 -QTKLLLNCVGPY 99 (452)
Q Consensus 88 -~~dvVIn~aGp~ 99 (452)
+.|+||||+|+.
T Consensus 68 ~~id~lv~~ag~~ 80 (223)
T PRK05884 68 HHLDTIVNVPAPS 80 (223)
T ss_pred hcCcEEEECCCcc
Confidence 579999999863
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=4.3e-09 Score=100.24 Aligned_cols=81 Identities=19% Similarity=0.154 Sum_probs=70.1
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..++|+||||++|+.++++|++++ ++|++++|++++++++.+++.. ...+.++.+|++|++++.++++
T Consensus 7 ~~ilItGatg~iG~~la~~l~~~g-------~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~D~~~~~~~~~~~~~~~ 77 (237)
T PRK07326 7 KVALITGGSKGIGFAIAEALLAEG-------YKVAITARDQKELEEAAAELNN--KGNVLGLAADVRDEADVQRAVDAIV 77 (237)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCC-------CEEEEeeCCHHHHHHHHHHHhc--cCcEEEEEccCCCHHHHHHHHHHHH
Confidence 579999999999999999999987 7899999999998888777642 1467889999999999988776
Q ss_pred ----CccEEeecCCCCC
Q 012947 88 ----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (452)
++|+|||++|+..
T Consensus 78 ~~~~~~d~vi~~ag~~~ 94 (237)
T PRK07326 78 AAFGGLDVLIANAGVGH 94 (237)
T ss_pred HHcCCCCEEEECCCCCC
Confidence 6899999998754
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=2.7e-09 Score=103.92 Aligned_cols=83 Identities=20% Similarity=0.151 Sum_probs=70.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~- 88 (452)
...++|+||+|++|+.++++|+++| +++++.+|+.++++++.+++.. ...++.++.+|++|++++++++++
T Consensus 10 ~k~~lItGa~~~iG~~ia~~l~~~G-------~~vv~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~ 81 (265)
T PRK07097 10 GKIALITGASYGIGFAIAKAYAKAG-------ATIVFNDINQELVDKGLAAYRE-LGIEAHGYVCDVTDEDGVQAMVSQI 81 (265)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CeEEEEeCCHHHHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHH
Confidence 4579999999999999999999998 7999999999988887766632 123678899999999999888763
Q ss_pred ------ccEEeecCCCCC
Q 012947 89 ------TKLLLNCVGPYR 100 (452)
Q Consensus 89 ------~dvVIn~aGp~~ 100 (452)
.|+||||+|...
T Consensus 82 ~~~~~~id~li~~ag~~~ 99 (265)
T PRK07097 82 EKEVGVIDILVNNAGIIK 99 (265)
T ss_pred HHhCCCCCEEEECCCCCC
Confidence 799999999643
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=98.98 E-value=4.6e-09 Score=106.67 Aligned_cols=83 Identities=20% Similarity=0.254 Sum_probs=67.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHcC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~-~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
..+|+|||||||||++++++|+++| ++|++.+|+.++...+....... ...++.++.+|+.|.+.+.+++++
T Consensus 5 ~k~iLVTGatGfIGs~l~~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~ 77 (351)
T PLN02650 5 KETVCVTGASGFIGSWLVMRLLERG-------YTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRG 77 (351)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHCC-------CEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhC
Confidence 4589999999999999999999998 79999999877665543322100 112567889999999999999999
Q ss_pred ccEEeecCCCC
Q 012947 89 TKLLLNCVGPY 99 (452)
Q Consensus 89 ~dvVIn~aGp~ 99 (452)
+|+|||+|++.
T Consensus 78 ~d~ViH~A~~~ 88 (351)
T PLN02650 78 CTGVFHVATPM 88 (351)
T ss_pred CCEEEEeCCCC
Confidence 99999999864
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=7.5e-09 Score=99.73 Aligned_cols=78 Identities=17% Similarity=0.252 Sum_probs=68.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
++++|+||||++|+.++++|+++| ++|++.+|+.++++++.+.+. .++.++.+|++|.+++.++++
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dl~~~~~i~~~~~~~~ 69 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQG-------HKVIATGRRQERLQELKDELG----DNLYIAQLDVRNRAAIEEMLASLP 69 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHhc----cceEEEEecCCCHHHHHHHHHHHH
Confidence 469999999999999999999998 799999999999888776653 367889999999999988775
Q ss_pred ----CccEEeecCCCC
Q 012947 88 ----QTKLLLNCVGPY 99 (452)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (452)
++|+|||++|..
T Consensus 70 ~~~~~id~vi~~ag~~ 85 (248)
T PRK10538 70 AEWRNIDVLVNNAGLA 85 (248)
T ss_pred HHcCCCCEEEECCCcc
Confidence 689999999854
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=98.98 E-value=5e-09 Score=108.34 Aligned_cols=107 Identities=20% Similarity=0.336 Sum_probs=77.9
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHH--HHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 012947 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQA--LQWASPSHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 8 ~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l--~~~l~~~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
.+.++|+|+|||||+|++++++|++++ ++|++..|+.++++.. .+++.. ...++.++.+|++|++++.++
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G-------~~V~~l~R~~~~~~~~~~~~~~~~-~~~~v~~v~~Dl~d~~~l~~~ 129 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRG-------YNVVAVAREKSGIRGKNGKEDTKK-ELPGAEVVFGDVTDADSLRKV 129 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEEechhhccccchhhHHhh-hcCCceEEEeeCCCHHHHHHH
Confidence 345789999999999999999999988 7999999988664311 111100 124688999999999999999
Q ss_pred Hc----CccEEeecCCCCCCC-----------CHHHHHHHHHhCC-cEEEecC
Q 012947 86 CS----QTKLLLNCVGPYRLH-----------GDPVAAACVHSGC-DYLDISG 122 (452)
Q Consensus 86 ~~----~~dvVIn~aGp~~~~-----------~~~vv~ac~~~g~-~yvDlsg 122 (452)
++ ++|+||||+|+.... ..+++++|.+.++ ++|.++.
T Consensus 130 ~~~~~~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS 182 (390)
T PLN02657 130 LFSEGDPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSA 182 (390)
T ss_pred HHHhCCCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEee
Confidence 98 589999999853211 1356666766665 3555553
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=2e-09 Score=104.32 Aligned_cols=81 Identities=15% Similarity=0.164 Sum_probs=65.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..+++|+||+|+||+.++++|+++| ++|++++|+ ++++++.+.+.. ...++.++.+|++|.+++.++++
T Consensus 15 ~k~vlItGas~gIG~~ia~~l~~~G-------~~v~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~i~~~~~~~ 85 (258)
T PRK06935 15 GKVAIVTGGNTGLGQGYAVALAKAG-------ADIIITTHG-TNWDETRRLIEK-EGRKVTFVQVDLTKPESAEKVVKEA 85 (258)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCC-cHHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHH
Confidence 4689999999999999999999998 899999998 455454444321 12467889999999999988887
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
..|++|||+|..
T Consensus 86 ~~~~g~id~li~~ag~~ 102 (258)
T PRK06935 86 LEEFGKIDILVNNAGTI 102 (258)
T ss_pred HHHcCCCCEEEECCCCC
Confidence 579999999864
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=4.2e-09 Score=107.08 Aligned_cols=82 Identities=16% Similarity=0.167 Sum_probs=63.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHH----HHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQ----ALQWASPSHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~----l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
.++|+|+|||||+|++++++|++++ ++|++.+|....... +..........++.++.+|+.|.+.+.++
T Consensus 15 ~~~vlVtGatGfiG~~lv~~L~~~g-------~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~ 87 (348)
T PRK15181 15 PKRWLITGVAGFIGSGLLEELLFLN-------QTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKA 87 (348)
T ss_pred CCEEEEECCccHHHHHHHHHHHHCC-------CEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHH
Confidence 4789999999999999999999998 789888885443222 21111100113577899999999999999
Q ss_pred HcCccEEeecCCC
Q 012947 86 CSQTKLLLNCVGP 98 (452)
Q Consensus 86 ~~~~dvVIn~aGp 98 (452)
++++|+|||+|+.
T Consensus 88 ~~~~d~ViHlAa~ 100 (348)
T PRK15181 88 CKNVDYVLHQAAL 100 (348)
T ss_pred hhCCCEEEECccc
Confidence 9999999999985
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.6e-09 Score=104.11 Aligned_cols=81 Identities=11% Similarity=0.090 Sum_probs=66.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEE-EecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLAL-AGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~i-agR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
.+++|+||+|++|+.++++|+++| ++|++ .+|+.++++++.+++.. ...++.++.+|++|++++.++++
T Consensus 5 ~~vlItGa~g~iG~~~a~~l~~~g-------~~v~~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 76 (250)
T PRK08063 5 KVALVTGSSRGIGKAIALRLAEEG-------YDIAVNYARSRKAAEETAEEIEA-LGRKALAVKANVGDVEKIKEMFAQI 76 (250)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEcCCCHHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 479999999999999999999998 67665 58998888777666532 13467888999999999988876
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
.+|+|||++|..
T Consensus 77 ~~~~~~id~vi~~ag~~ 93 (250)
T PRK08063 77 DEEFGRLDVFVNNAASG 93 (250)
T ss_pred HHHcCCCCEEEECCCCC
Confidence 479999999864
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=4.2e-09 Score=100.00 Aligned_cols=80 Identities=24% Similarity=0.223 Sum_probs=67.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..+++|+||||++|+.+++.|+++| ++|++++|+.++..+..+++. ...+.++.+|+.|.+++.++++
T Consensus 7 ~k~vlItGatg~iG~~la~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~ 76 (239)
T PRK12828 7 GKVVAITGGFGGLGRATAAWLAARG-------ARVALIGRGAAPLSQTLPGVP---ADALRIGGIDLVDPQAARRAVDEV 76 (239)
T ss_pred CCEEEEECCCCcHhHHHHHHHHHCC-------CeEEEEeCChHhHHHHHHHHh---hcCceEEEeecCCHHHHHHHHHHH
Confidence 4689999999999999999999998 799999999988777666553 2356788899999999988776
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
++|+|||++|..
T Consensus 77 ~~~~~~~d~vi~~ag~~ 93 (239)
T PRK12828 77 NRQFGRLDALVNIAGAF 93 (239)
T ss_pred HHHhCCcCEEEECCccc
Confidence 579999999854
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=3.2e-09 Score=101.82 Aligned_cols=81 Identities=17% Similarity=0.135 Sum_probs=69.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..+++|+||||++|+.++++|+++| ++|++++|+.++++++..++.. ..++.++.+|+.|+++++++++
T Consensus 5 ~~~vlItGasg~iG~~l~~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~ 75 (251)
T PRK07231 5 GKVAIVTGASSGIGEGIARRFAAEG-------ARVVVTDRNEEAAERVAAEILA--GGRAIAVAADVSDEADVEAAVAAA 75 (251)
T ss_pred CcEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHH
Confidence 4589999999999999999999998 7899999999988887776631 2457789999999999998876
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
+.|+|||++|..
T Consensus 76 ~~~~~~~d~vi~~ag~~ 92 (251)
T PRK07231 76 LERFGSVDILVNNAGTT 92 (251)
T ss_pred HHHhCCCCEEEECCCCC
Confidence 469999999864
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.5e-09 Score=104.50 Aligned_cols=80 Identities=15% Similarity=0.094 Sum_probs=67.1
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc----
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~---- 87 (452)
+++|+||+|++|+.++++|+++| .+|++.+|+.++++++.+++.. ...++.++.+|++|++++.++++
T Consensus 2 ~~lItG~sg~iG~~la~~l~~~G-------~~v~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~i~~~~~~~~~ 73 (254)
T TIGR02415 2 VALVTGGAQGIGKGIAERLAKDG-------FAVAVADLNEETAKETAKEINQ-AGGKAVAYKLDVSDKDQVFSAIDQAAE 73 (254)
T ss_pred EEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 58999999999999999999998 7999999998887777666532 13457888999999999988765
Q ss_pred ---CccEEeecCCCC
Q 012947 88 ---QTKLLLNCVGPY 99 (452)
Q Consensus 88 ---~~dvVIn~aGp~ 99 (452)
.+|+||||+|..
T Consensus 74 ~~~~id~vi~~ag~~ 88 (254)
T TIGR02415 74 KFGGFDVMVNNAGVA 88 (254)
T ss_pred HcCCCCEEEECCCcC
Confidence 469999999864
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=3.7e-09 Score=101.11 Aligned_cols=78 Identities=19% Similarity=0.162 Sum_probs=67.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..+++|+||+|++|+.+++.|+++| ++|++.+|+.++++++.+.. +..++.+|++|.+++.++++
T Consensus 9 ~~~~lItGa~g~iG~~~a~~l~~~g-------~~V~~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~v~~~~~~~ 75 (245)
T PRK07060 9 GKSVLVTGASSGIGRACAVALAQRG-------ARVVAAARNAAALDRLAGET------GCEPLRLDVGDDAAIRAALAAA 75 (245)
T ss_pred CCEEEEeCCcchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHh------CCeEEEecCCCHHHHHHHHHHh
Confidence 3689999999999999999999998 79999999998887776643 35678899999999988886
Q ss_pred -CccEEeecCCCCC
Q 012947 88 -QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -~~dvVIn~aGp~~ 100 (452)
++|+|||++|...
T Consensus 76 ~~~d~vi~~ag~~~ 89 (245)
T PRK07060 76 GAFDGLVNCAGIAS 89 (245)
T ss_pred CCCCEEEECCCCCC
Confidence 4799999998643
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.4e-09 Score=103.36 Aligned_cols=82 Identities=11% Similarity=0.097 Sum_probs=69.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|++|+.++++|+++| ++|++.+|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 9 ~k~~lItGas~giG~~ia~~L~~~G-------~~vvl~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~~~~~~~~~ 80 (254)
T PRK08085 9 GKNILITGSAQGIGFLLATGLAEYG-------AEIIINDITAERAELAVAKLRQ-EGIKAHAAPFNVTHKQEVEAAIEHI 80 (254)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcC-------CEEEEEcCCHHHHHHHHHHHHh-cCCeEEEEecCCCCHHHHHHHHHHH
Confidence 4579999999999999999999998 7999999999998887776642 12356778899999999988775
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
+.|+|||++|..
T Consensus 81 ~~~~~~id~vi~~ag~~ 97 (254)
T PRK08085 81 EKDIGPIDVLINNAGIQ 97 (254)
T ss_pred HHhcCCCCEEEECCCcC
Confidence 379999999854
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=3.1e-09 Score=102.04 Aligned_cols=81 Identities=14% Similarity=0.069 Sum_probs=69.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..+++|+||+|++|+.++++|+++| ++|++.+|+.+++++..+++. ...++.++.+|++|+++++++++
T Consensus 5 ~k~~lItG~sg~iG~~la~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~i 75 (252)
T PRK06138 5 GRVAIVTGAGSGIGRATAKLFAREG-------ARVVVADRDAEAAERVAAAIA--AGGRAFARQGDVGSAEAVEALVDFV 75 (252)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCC-------CeEEEecCCHHHHHHHHHHHh--cCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 3589999999999999999999998 799999999988877776653 13457889999999999988876
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
++|+||||+|..
T Consensus 76 ~~~~~~id~vi~~ag~~ 92 (252)
T PRK06138 76 AARWGRLDVLVNNAGFG 92 (252)
T ss_pred HHHcCCCCEEEECCCCC
Confidence 579999999964
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=6.2e-09 Score=100.34 Aligned_cols=83 Identities=23% Similarity=0.296 Sum_probs=68.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHcC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~-~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
..+++|+||+|++|+.+++.|+++| ++|++.+|+.++++++.+++... ....+.++.+|++|++++.+++++
T Consensus 4 ~k~vlItGas~giG~~~a~~l~~~g-------~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 76 (256)
T PRK09186 4 GKTILITGAGGLIGSALVKAILEAG-------GIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSK 76 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHH
Confidence 3579999999999999999999998 79999999999988887776321 122456779999999999888874
Q ss_pred -------ccEEeecCCCC
Q 012947 89 -------TKLLLNCVGPY 99 (452)
Q Consensus 89 -------~dvVIn~aGp~ 99 (452)
.|+||||||+.
T Consensus 77 ~~~~~~~id~vi~~A~~~ 94 (256)
T PRK09186 77 SAEKYGKIDGAVNCAYPR 94 (256)
T ss_pred HHHHcCCccEEEECCccc
Confidence 79999999753
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.3e-09 Score=103.64 Aligned_cols=77 Identities=17% Similarity=0.121 Sum_probs=66.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..+++|+||+|++|+.++++|+++| ++|++++|+..+++++.+++. ..++.+|++|+++++++++
T Consensus 7 ~~~vlItGasggIG~~~a~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~------~~~~~~D~~~~~~~~~~~~~~ 73 (255)
T PRK06057 7 GRVAVITGGGSGIGLATARRLAAEG-------ATVVVGDIDPEAGKAAADEVG------GLFVPTDVTDEDAVNALFDTA 73 (255)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHcC------CcEEEeeCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 799999999988877776552 2578999999999988876
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
+.|+||||+|..
T Consensus 74 ~~~~~~id~vi~~ag~~ 90 (255)
T PRK06057 74 AETYGSVDIAFNNAGIS 90 (255)
T ss_pred HHHcCCCCEEEECCCcC
Confidence 469999999864
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=98.97 E-value=4e-09 Score=102.45 Aligned_cols=112 Identities=10% Similarity=0.067 Sum_probs=80.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|+||+.+++.|+++| ++|++++|+.++++++.+.. ..++..+.+|++|.+++.++++
T Consensus 5 ~k~vlItGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~l~~~~----~~~~~~~~~D~~~~~~~~~~~~~~ 73 (262)
T TIGR03325 5 GEVVLVTGGASGLGRAIVDRFVAEG-------ARVAVLDKSAAGLQELEAAH----GDAVVGVEGDVRSLDDHKEAVARC 73 (262)
T ss_pred CcEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHhhc----CCceEEEEeccCCHHHHHHHHHHH
Confidence 3589999999999999999999998 89999999998888776543 2457788999999998887775
Q ss_pred -----CccEEeecCCCCCCCC------HH-HHHHHHHhCCcEEEecCcHHHHHHHHHHH
Q 012947 88 -----QTKLLLNCVGPYRLHG------DP-VAAACVHSGCDYLDISGEPEFMERMEARY 134 (452)
Q Consensus 88 -----~~dvVIn~aGp~~~~~------~~-vv~ac~~~g~~yvDlsge~~~~~~~~~~~ 134 (452)
+.|+||||+|.....+ .. ..+. -..+.-+++.+....++...+.+
T Consensus 74 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~--~~~~~~~N~~~~~~l~~~~~~~~ 130 (262)
T TIGR03325 74 VAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEA--FDEVFHINVKGYLLAVKAALPAL 130 (262)
T ss_pred HHHhCCCCEEEECCCCCccCCccccCCchhhhHH--HHHhheeecHhHHHHHHHHHHHH
Confidence 4699999999642111 00 0011 11234566666666666664433
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.1e-09 Score=102.77 Aligned_cols=83 Identities=20% Similarity=0.191 Sum_probs=69.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|++|+.++++|+++| ++|++++|+.++++++.+++.. ...++.++.+|++|++++.++++
T Consensus 7 ~~~vlVtG~sg~iG~~l~~~L~~~G-------~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 78 (239)
T PRK07666 7 GKNALITGAGRGIGRAVAIALAKEG-------VNVGLLARTEENLKAVAEEVEA-YGVKVVIATADVSDYEEVTAAIEQL 78 (239)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHH-hCCeEEEEECCCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 7999999999888777666532 23467788999999999988876
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
++|+|||++|...
T Consensus 79 ~~~~~~id~vi~~ag~~~ 96 (239)
T PRK07666 79 KNELGSIDILINNAGISK 96 (239)
T ss_pred HHHcCCccEEEEcCcccc
Confidence 6899999998643
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=98.96 E-value=7.9e-09 Score=104.10 Aligned_cols=82 Identities=17% Similarity=0.226 Sum_probs=67.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+|+|+||+||+|++++++|++++. ..+|.+.+|+..+...+.+.+. ..++.++.+|++|++++.++++++
T Consensus 4 ~k~vLVTGatG~IG~~l~~~L~~~g~-----~~~V~~~~r~~~~~~~~~~~~~---~~~~~~v~~Dl~d~~~l~~~~~~i 75 (324)
T TIGR03589 4 NKSILITGGTGSFGKAFISRLLENYN-----PKKIIIYSRDELKQWEMQQKFP---APCLRFFIGDVRDKERLTRALRGV 75 (324)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHhCC-----CcEEEEEcCChhHHHHHHHHhC---CCcEEEEEccCCCHHHHHHHHhcC
Confidence 35799999999999999999999862 1588899998777655554442 246788999999999999999999
Q ss_pred cEEeecCCCC
Q 012947 90 KLLLNCVGPY 99 (452)
Q Consensus 90 dvVIn~aGp~ 99 (452)
|+|||+||..
T Consensus 76 D~Vih~Ag~~ 85 (324)
T TIGR03589 76 DYVVHAAALK 85 (324)
T ss_pred CEEEECcccC
Confidence 9999999854
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.8e-09 Score=97.25 Aligned_cols=82 Identities=23% Similarity=0.355 Sum_probs=69.5
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC--hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN--PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~--~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
.++|+||++.+|+.++++|++++. .+|++++|+ .++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 2 ~~lItGa~~giG~~~a~~l~~~g~------~~v~~~~r~~~~~~~~~l~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 74 (167)
T PF00106_consen 2 TVLITGASSGIGRALARALARRGA------RVVILTSRSEDSEGAQELIQELKA-PGAKITFIECDLSDPESIRALIEEV 74 (167)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTT------EEEEEEESSCHHHHHHHHHHHHHH-TTSEEEEEESETTSHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHhcCc------eEEEEeeecccccccccccccccc-ccccccccccccccccccccccccc
Confidence 589999999999999999999962 789999999 7778777776642 23578899999999999988876
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
..|+||||+|...
T Consensus 75 ~~~~~~ld~li~~ag~~~ 92 (167)
T PF00106_consen 75 IKRFGPLDILINNAGIFS 92 (167)
T ss_dssp HHHHSSESEEEEECSCTT
T ss_pred cccccccccccccccccc
Confidence 5699999999765
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.9e-09 Score=103.39 Aligned_cols=76 Identities=26% Similarity=0.253 Sum_probs=66.0
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC---
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ--- 88 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~--- 88 (452)
.++|+||||++|+.+++.|+++| ++|++.+|+.++++++.+.. .++.++.+|++|++++++++++
T Consensus 3 ~vlItGas~giG~~la~~L~~~G-------~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~ 70 (240)
T PRK06101 3 AVLITGATSGIGKQLALDYAKQG-------WQVIACGRNQSVLDELHTQS-----ANIFTLAFDVTDHPGTKAALSQLPF 70 (240)
T ss_pred EEEEEcCCcHHHHHHHHHHHhCC-------CEEEEEECCHHHHHHHHHhc-----CCCeEEEeeCCCHHHHHHHHHhccc
Confidence 69999999999999999999998 79999999999887776532 3578899999999999999875
Q ss_pred -ccEEeecCCCC
Q 012947 89 -TKLLLNCVGPY 99 (452)
Q Consensus 89 -~dvVIn~aGp~ 99 (452)
.|++||++|..
T Consensus 71 ~~d~~i~~ag~~ 82 (240)
T PRK06101 71 IPELWIFNAGDC 82 (240)
T ss_pred CCCEEEEcCccc
Confidence 48899999853
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.96 E-value=4e-09 Score=103.29 Aligned_cols=81 Identities=15% Similarity=0.079 Sum_probs=67.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+++||+.+++.|+++| ++|++++|+ ++++++.+++.. ...++..+.+|++|+++++++++
T Consensus 6 ~k~vlItGas~gIG~aia~~l~~~G-------~~vi~~~r~-~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~ 76 (272)
T PRK08589 6 NKVAVITGASTGIGQASAIALAQEG-------AYVLAVDIA-EAVSETVDKIKS-NGGKAKAYHVDISDEQQVKDFASEI 76 (272)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCc-HHHHHHHHHHHh-cCCeEEEEEeecCCHHHHHHHHHHH
Confidence 3579999999999999999999998 899999999 777777766632 12457889999999999988776
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
+.|+||||||..
T Consensus 77 ~~~~g~id~li~~Ag~~ 93 (272)
T PRK08589 77 KEQFGRVDVLFNNAGVD 93 (272)
T ss_pred HHHcCCcCEEEECCCCC
Confidence 469999999864
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=3.8e-09 Score=104.47 Aligned_cols=83 Identities=16% Similarity=0.041 Sum_probs=67.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh---------hHHHHHHHHhCCCCCCCccEEEEeCCCHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP---------TRVKQALQWASPSHSLSIPILTADTTDPP 80 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~---------~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~ 80 (452)
...++|+||+++||+.+++.|+++| .+|++++|+. ++++++.+++.. ...++.++.+|++|++
T Consensus 6 ~k~~lITGas~GIG~aia~~la~~G-------~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~Dv~~~~ 77 (286)
T PRK07791 6 GRVVIVTGAGGGIGRAHALAFAAEG-------ARVVVNDIGVGLDGSASGGSAAQAVVDEIVA-AGGEAVANGDDIADWD 77 (286)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CEEEEeeCCccccccccchhHHHHHHHHHHh-cCCceEEEeCCCCCHH
Confidence 4589999999999999999999998 7899988876 777777776632 1345678899999999
Q ss_pred HHHHHHc-------CccEEeecCCCCC
Q 012947 81 SLHRLCS-------QTKLLLNCVGPYR 100 (452)
Q Consensus 81 sl~~~~~-------~~dvVIn~aGp~~ 100 (452)
+++++++ +.|+||||||...
T Consensus 78 ~v~~~~~~~~~~~g~id~lv~nAG~~~ 104 (286)
T PRK07791 78 GAANLVDAAVETFGGLDVLVNNAGILR 104 (286)
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence 9887765 5699999999653
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=3.5e-09 Score=101.49 Aligned_cols=83 Identities=16% Similarity=0.117 Sum_probs=69.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|++|+.++++|+++| +++++.+|++++++.+.+++.. ...++.++.+|++|+++++++++
T Consensus 7 ~~~vlItGa~g~iG~~la~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~ 78 (250)
T PRK12939 7 GKRALVTGAARGLGAAFAEALAEAG-------ATVAFNDGLAAEARELAAALEA-AGGRAHAIAADLADPASVQRFFDAA 78 (250)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHH
Confidence 4679999999999999999999998 7899999999988877766632 12467889999999999988774
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
++|+||||+|...
T Consensus 79 ~~~~~~id~vi~~ag~~~ 96 (250)
T PRK12939 79 AAALGGLDGLVNNAGITN 96 (250)
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 5899999998643
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=3.1e-09 Score=102.75 Aligned_cols=83 Identities=14% Similarity=0.096 Sum_probs=66.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh-HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~-kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
...++|+||+|+||+.+++.|+++| ++|++.+|+.+ .++++.+++.. ...++..+.+|+.|++++++++++
T Consensus 8 ~k~~lVtG~s~gIG~~ia~~l~~~G-------~~v~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~i~~~~~~ 79 (254)
T PRK06114 8 GQVAFVTGAGSGIGQRIAIGLAQAG-------ADVALFDLRTDDGLAETAEHIEA-AGRRAIQIAADVTSKADLRAAVAR 79 (254)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCCcchHHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHH
Confidence 3589999999999999999999998 89999999754 45555555531 124577889999999999887764
Q ss_pred -------ccEEeecCCCCC
Q 012947 89 -------TKLLLNCVGPYR 100 (452)
Q Consensus 89 -------~dvVIn~aGp~~ 100 (452)
.|+||||+|...
T Consensus 80 ~~~~~g~id~li~~ag~~~ 98 (254)
T PRK06114 80 TEAELGALTLAVNAAGIAN 98 (254)
T ss_pred HHHHcCCCCEEEECCCCCC
Confidence 599999999653
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=2.4e-09 Score=103.66 Aligned_cols=83 Identities=14% Similarity=0.118 Sum_probs=65.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR-~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
..+++|+||+|++|+.+++.|+++| ++++++.| +.++++.+.+++.. ...++.++.+|++|.+++.+++++
T Consensus 9 ~k~vlItGas~giG~~la~~l~~~g-------~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~ 80 (258)
T PRK09134 9 PRAALVTGAARRIGRAIALDLAAHG-------FDVAVHYNRSRDEAEALAAEIRA-LGRRAVALQADLADEAEVRALVAR 80 (258)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCCHHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHH
Confidence 4689999999999999999999988 68877665 55666666555421 134577899999999999888763
Q ss_pred -------ccEEeecCCCCC
Q 012947 89 -------TKLLLNCVGPYR 100 (452)
Q Consensus 89 -------~dvVIn~aGp~~ 100 (452)
+|+||||+|...
T Consensus 81 ~~~~~~~iD~vi~~ag~~~ 99 (258)
T PRK09134 81 ASAALGPITLLVNNASLFE 99 (258)
T ss_pred HHHHcCCCCEEEECCcCCC
Confidence 699999999643
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=2e-09 Score=103.92 Aligned_cols=81 Identities=17% Similarity=0.227 Sum_probs=68.1
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..++|+||+|++|+.+++.|+++| ++|++++|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 2 k~~lItG~s~giG~~ia~~l~~~G-------~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~ 73 (252)
T PRK07677 2 KVVIITGGSSGMGKAMAKRFAEEG-------ANVVITGRTKEKLEEAKLEIEQ-FPGQVLTVQMDVRNPEDVQKMVEQID 73 (252)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 7999999999888877766532 12467789999999999988775
Q ss_pred ----CccEEeecCCCC
Q 012947 88 ----QTKLLLNCVGPY 99 (452)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (452)
..|+||||+|..
T Consensus 74 ~~~~~id~lI~~ag~~ 89 (252)
T PRK07677 74 EKFGRIDALINNAAGN 89 (252)
T ss_pred HHhCCccEEEECCCCC
Confidence 469999999854
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=8.5e-09 Score=100.98 Aligned_cols=82 Identities=20% Similarity=0.208 Sum_probs=69.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|++|+.+++.|+++| ++|++.+|+.++++++.+++.. ...++..+.+|++|++++.++++
T Consensus 10 ~k~vlVtGas~giG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~ 81 (278)
T PRK08277 10 GKVAVITGGGGVLGGAMAKELARAG-------AKVAILDRNQEKAEAVVAEIKA-AGGEALAVKADVLDKESLEQARQQI 81 (278)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHH
Confidence 4679999999999999999999998 7999999999888877776632 12357788999999999887765
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
++|+||||+|..
T Consensus 82 ~~~~g~id~li~~ag~~ 98 (278)
T PRK08277 82 LEDFGPCDILINGAGGN 98 (278)
T ss_pred HHHcCCCCEEEECCCCC
Confidence 679999999954
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=2.3e-09 Score=104.86 Aligned_cols=81 Identities=15% Similarity=0.119 Sum_probs=65.6
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc----
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~---- 87 (452)
+++|+||||++|+.++++|+++| ++|++.+|+.++++++.+++.......+.++.+|++|+++++++++
T Consensus 2 ~vlItGas~giG~~la~~la~~G-------~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 74 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQG-------AELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHA 74 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHH
Confidence 69999999999999999999998 7899999999888777766532111224557899999999887765
Q ss_pred ---CccEEeecCCCC
Q 012947 88 ---QTKLLLNCVGPY 99 (452)
Q Consensus 88 ---~~dvVIn~aGp~ 99 (452)
+.|+||||+|..
T Consensus 75 ~~~~id~lv~~ag~~ 89 (272)
T PRK07832 75 AHGSMDVVMNIAGIS 89 (272)
T ss_pred hcCCCCEEEECCCCC
Confidence 369999999964
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.7e-09 Score=103.66 Aligned_cols=82 Identities=18% Similarity=0.218 Sum_probs=68.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~-- 88 (452)
++++|+||||++|+.++++|+++| ++|++++|+.++++++.+++......++.++.+|++|+++++++++.
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G-------~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 74 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAG-------ARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLP 74 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcC-------CEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHh
Confidence 379999999999999999999998 79999999999887776655321134678999999999998887764
Q ss_pred --ccEEeecCCCC
Q 012947 89 --TKLLLNCVGPY 99 (452)
Q Consensus 89 --~dvVIn~aGp~ 99 (452)
.|+|||++|..
T Consensus 75 ~~~d~vv~~ag~~ 87 (243)
T PRK07102 75 ALPDIVLIAVGTL 87 (243)
T ss_pred hcCCEEEECCcCC
Confidence 59999999854
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.1e-08 Score=105.98 Aligned_cols=80 Identities=18% Similarity=0.201 Sum_probs=66.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
+..+++|+||+|++|+++++.|+++| .+|++++|+.+++++..+.. ..++..+.+|++|++++.+.+.+
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G-------~~Vi~l~r~~~~l~~~~~~~----~~~v~~v~~Dvsd~~~v~~~l~~ 245 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQG-------AKVVALTSNSDKITLEINGE----DLPVKTLHWQVGQEAALAELLEK 245 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHhhc----CCCeEEEEeeCCCHHHHHHHhCC
Confidence 34689999999999999999999998 79999999988775443321 12456788999999999999999
Q ss_pred ccEEeecCCCC
Q 012947 89 TKLLLNCVGPY 99 (452)
Q Consensus 89 ~dvVIn~aGp~ 99 (452)
+|++|||+|..
T Consensus 246 IDiLInnAGi~ 256 (406)
T PRK07424 246 VDILIINHGIN 256 (406)
T ss_pred CCEEEECCCcC
Confidence 99999999864
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=5.8e-09 Score=100.00 Aligned_cols=78 Identities=21% Similarity=0.219 Sum_probs=66.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..++|+||+|++|+.++++|+++| ++|++.+|+.++++++.++++ .++.++.+|++|.+++.++++
T Consensus 7 k~vlItGasg~iG~~la~~l~~~g-------~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~ 75 (249)
T PRK06500 7 KTALITGGTSGIGLETARQFLAEG-------ARVAITGRDPASLEAARAELG----ESALVIRADAGDVAAQKALAQALA 75 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-------CEEEEecCCHHHHHHHHHHhC----CceEEEEecCCCHHHHHHHHHHHH
Confidence 579999999999999999999998 799999999988888777663 356788999999988776654
Q ss_pred ----CccEEeecCCCC
Q 012947 88 ----QTKLLLNCVGPY 99 (452)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (452)
++|+||||+|..
T Consensus 76 ~~~~~id~vi~~ag~~ 91 (249)
T PRK06500 76 EAFGRLDAVFINAGVA 91 (249)
T ss_pred HHhCCCCEEEECCCCC
Confidence 579999999864
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=5.7e-09 Score=101.21 Aligned_cols=82 Identities=28% Similarity=0.269 Sum_probs=68.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
.+++|+||+|++|+.+++.|++++ ++|++++|+.++.+++.+++.. ...++.++.+|+.|++++.++++
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g-------~~Vi~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~ 73 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAG-------AQLVLAARNETRLASLAQELAD-HGGEALVVPTDVSDAEACERLIEAAV 73 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 369999999999999999999988 7999999999888777666532 23467788999999999988776
Q ss_pred ----CccEEeecCCCCC
Q 012947 88 ----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (452)
+.|+||||+|...
T Consensus 74 ~~~~~id~vi~~ag~~~ 90 (263)
T PRK06181 74 ARFGGIDILVNNAGITM 90 (263)
T ss_pred HHcCCCCEEEECCCccc
Confidence 5799999998654
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=2.9e-09 Score=103.45 Aligned_cols=81 Identities=21% Similarity=0.187 Sum_probs=69.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|++|+.++++|+++| ++|++++|+.++++++..++. ...++.++.+|++|+++++++++
T Consensus 5 ~~~vlItG~s~~iG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~~~ 75 (263)
T PRK09072 5 DKRVLLTGASGGIGQALAEALAAAG-------ARLLLVGRNAEKLEALAARLP--YPGRHRWVVADLTSEAGREAVLARA 75 (263)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHh--cCCceEEEEccCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 799999999999888877663 23577889999999999887765
Q ss_pred ----CccEEeecCCCC
Q 012947 88 ----QTKLLLNCVGPY 99 (452)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (452)
..|+|||++|..
T Consensus 76 ~~~~~id~lv~~ag~~ 91 (263)
T PRK09072 76 REMGGINVLINNAGVN 91 (263)
T ss_pred HhcCCCCEEEECCCCC
Confidence 469999999864
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.2e-08 Score=99.71 Aligned_cols=83 Identities=19% Similarity=0.231 Sum_probs=69.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~-~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
..+++|+||+|+||++++++|+++| ++|++.+|+.++++.+.+++... ...++.++.+|+.|++++.++++
T Consensus 7 ~k~vlItGasg~IG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 79 (276)
T PRK05875 7 DRTYLVTGGGSGIGKGVAAGLVAAG-------AAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDA 79 (276)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-------CeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHH
Confidence 3689999999999999999999998 79999999998887776665320 12467788999999999988876
Q ss_pred ------CccEEeecCCCC
Q 012947 88 ------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (452)
++|+|||++|..
T Consensus 80 ~~~~~~~~d~li~~ag~~ 97 (276)
T PRK05875 80 ATAWHGRLHGVVHCAGGS 97 (276)
T ss_pred HHHHcCCCCEEEECCCcc
Confidence 579999999854
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=2.9e-09 Score=102.76 Aligned_cols=82 Identities=17% Similarity=0.112 Sum_probs=69.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..+++|+||||+||+.++++|+++| ++|++++|++++++++.+++.. ...++..+.+|++|+++++++++
T Consensus 5 ~k~vlItGa~~~IG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 76 (258)
T PRK07890 5 GKVVVVSGVGPGLGRTLAVRAARAG-------ADVVLAARTAERLDEVAAEIDD-LGRRALAVPTDITDEDQCANLVALA 76 (258)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHHHH-hCCceEEEecCCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 8999999999888877776632 12457889999999999987775
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
++|+|||++|..
T Consensus 77 ~~~~g~~d~vi~~ag~~ 93 (258)
T PRK07890 77 LERFGRVDALVNNAFRV 93 (258)
T ss_pred HHHcCCccEEEECCccC
Confidence 579999999864
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=5.6e-09 Score=105.91 Aligned_cols=76 Identities=17% Similarity=0.252 Sum_probs=62.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCC-CHHHHHHHHcCc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTT-DPPSLHRLCSQT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~-d~~sl~~~~~~~ 89 (452)
++|+|||||||+|++++++|++.+. ++|.+.+|+.++...+.. ...+.++.+|+. +.+.+.++++++
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~------~~V~~~~r~~~~~~~~~~------~~~~~~~~~Dl~~~~~~~~~~~~~~ 69 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTD------WEVYGMDMQTDRLGDLVN------HPRMHFFEGDITINKEWIEYHVKKC 69 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCC------CeEEEEeCcHHHHHHhcc------CCCeEEEeCCCCCCHHHHHHHHcCC
Confidence 4799999999999999999998631 789999998765543321 235789999997 778898999999
Q ss_pred cEEeecCCC
Q 012947 90 KLLLNCVGP 98 (452)
Q Consensus 90 dvVIn~aGp 98 (452)
|+|||+|+.
T Consensus 70 d~ViH~aa~ 78 (347)
T PRK11908 70 DVILPLVAI 78 (347)
T ss_pred CEEEECccc
Confidence 999999974
|
|
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.93 E-value=4.8e-09 Score=105.00 Aligned_cols=128 Identities=19% Similarity=0.118 Sum_probs=95.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~-~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++|||||.+||+.+|+.|+.+| .+|++++||.++.++.++++.. ....++.++.+|++|.+++.++++
T Consensus 35 ~~~~vVTGansGIG~eta~~La~~G-------a~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~ 107 (314)
T KOG1208|consen 35 GKVALVTGATSGIGFETARELALRG-------AHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEE 107 (314)
T ss_pred CcEEEEECCCCchHHHHHHHHHhCC-------CEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHH
Confidence 4679999999999999999999999 8999999999999998888864 234567779999999999998876
Q ss_pred ------CccEEeecCCCCCCCC---HHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCC
Q 012947 88 ------QTKLLLNCVGPYRLHG---DPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACG 150 (452)
Q Consensus 88 ------~~dvVIn~aGp~~~~~---~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G 150 (452)
..|++|||||.+.... ..-+|.+.. ++|+ |...+++.+++.+...+. ..+++|+|..
T Consensus 108 ~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~--tN~l---g~flLt~lLlp~lk~s~~-~RIV~vsS~~ 173 (314)
T KOG1208|consen 108 FKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFA--TNYL---GHFLLTELLLPLLKRSAP-SRIVNVSSIL 173 (314)
T ss_pred HHhcCCCccEEEeCcccccCCcccCccchhheeh--hhhH---HHHHHHHHHHHHHhhCCC-CCEEEEcCcc
Confidence 4699999999775542 111233322 3333 777778888777765443 4555555544
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=5.1e-09 Score=101.23 Aligned_cols=76 Identities=13% Similarity=0.135 Sum_probs=61.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh-HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~-kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++|+||+|++|+.++++|+++| ++|++..|+.+ .++++.+ .++.++.+|++|+++++++++
T Consensus 7 ~k~~lItGas~gIG~~~a~~l~~~G-------~~v~~~~~~~~~~~~~l~~-------~~~~~~~~Dl~~~~~~~~~~~~ 72 (255)
T PRK06463 7 GKVALITGGTRGIGRAIAEAFLREG-------AKVAVLYNSAENEAKELRE-------KGVFTIKCDVGNRDQVKKSKEV 72 (255)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCC-------CEEEEEeCCcHHHHHHHHh-------CCCeEEEecCCCHHHHHHHHHH
Confidence 3689999999999999999999998 78888776544 3333322 246789999999999988876
Q ss_pred ------CccEEeecCCCC
Q 012947 88 ------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (452)
+.|+||||+|..
T Consensus 73 ~~~~~~~id~li~~ag~~ 90 (255)
T PRK06463 73 VEKEFGRVDVLVNNAGIM 90 (255)
T ss_pred HHHHcCCCCEEEECCCcC
Confidence 579999999864
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=98.92 E-value=4.3e-09 Score=100.27 Aligned_cols=82 Identities=16% Similarity=0.131 Sum_probs=68.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~-- 88 (452)
.+++|+||+|++|+.++++|+++| ++|++++|+.++++.+.+++.. ...++.++.+|+.|++++.+++++
T Consensus 6 ~~ilItGasg~iG~~l~~~l~~~g-------~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~ 77 (246)
T PRK05653 6 KTALVTGASRGIGRAIALRLAADG-------AKVVIYDSNEEAAEALAAELRA-AGGEARVLVFDVSDEAAVRALIEAAV 77 (246)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCChhHHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHHHH
Confidence 579999999999999999999998 7899999999888776665531 234677888999999999887764
Q ss_pred -----ccEEeecCCCCC
Q 012947 89 -----TKLLLNCVGPYR 100 (452)
Q Consensus 89 -----~dvVIn~aGp~~ 100 (452)
+|+|||++|...
T Consensus 78 ~~~~~id~vi~~ag~~~ 94 (246)
T PRK05653 78 EAFGALDILVNNAGITR 94 (246)
T ss_pred HHhCCCCEEEECCCcCC
Confidence 599999998643
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=98.92 E-value=2.4e-09 Score=105.18 Aligned_cols=79 Identities=20% Similarity=0.313 Sum_probs=61.0
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC-CCCCCcc----EEEEeCCCHHHHHHHHc
Q 012947 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIP----ILTADTTDPPSLHRLCS 87 (452)
Q Consensus 13 ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~-~~~~~v~----~v~~Dl~d~~sl~~~~~ 87 (452)
|+||||+|.||+.+|++|++.+| .++++.+|++.++-++..++.. ....++. .+.+|+.|.+.+.++++
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p------~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~ 74 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGP------KKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFE 74 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-------SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT
T ss_pred CEEEccccHHHHHHHHHHHhcCC------CeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHh
Confidence 79999999999999999999986 6999999999999988888731 0122343 34789999999999999
Q ss_pred --CccEEeecCC
Q 012947 88 --QTKLLLNCVG 97 (452)
Q Consensus 88 --~~dvVIn~aG 97 (452)
++|+|+|+|.
T Consensus 75 ~~~pdiVfHaAA 86 (293)
T PF02719_consen 75 EYKPDIVFHAAA 86 (293)
T ss_dssp --T-SEEEE---
T ss_pred hcCCCEEEEChh
Confidence 8999999996
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.1e-08 Score=102.60 Aligned_cols=83 Identities=18% Similarity=0.203 Sum_probs=66.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~-~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
..+++|+||+||||+++++.|+++| ++|.+..|+.++.+.....+.. ....++.++.+|++|++++.+++++
T Consensus 5 ~k~vlVtG~~G~IG~~l~~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~ 77 (325)
T PLN02989 5 GKVVCVTGASGYIASWIVKLLLFRG-------YTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDG 77 (325)
T ss_pred CCEEEEECCchHHHHHHHHHHHHCC-------CEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcC
Confidence 4689999999999999999999998 7898889987765443222110 0123578889999999999999999
Q ss_pred ccEEeecCCCC
Q 012947 89 TKLLLNCVGPY 99 (452)
Q Consensus 89 ~dvVIn~aGp~ 99 (452)
+|+||||||+.
T Consensus 78 ~d~vih~A~~~ 88 (325)
T PLN02989 78 CETVFHTASPV 88 (325)
T ss_pred CCEEEEeCCCC
Confidence 99999999964
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.92 E-value=9.7e-09 Score=98.21 Aligned_cols=83 Identities=18% Similarity=0.152 Sum_probs=65.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC-hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~-~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
..+++|+||+|++|++++++|++++ ++|++++|+ .++++++.+.+.......+.++.+|++|.+++.++++
T Consensus 6 ~~~vlItGa~g~iG~~l~~~l~~~g-------~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 78 (249)
T PRK09135 6 AKVALITGGARRIGAAIARTLHAAG-------YRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAA 78 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHH
Confidence 3579999999999999999999998 799999986 4555555544421012356788999999999988876
Q ss_pred ------CccEEeecCCCC
Q 012947 88 ------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (452)
++|+||||+|..
T Consensus 79 ~~~~~~~~d~vi~~ag~~ 96 (249)
T PRK09135 79 CVAAFGRLDALVNNASSF 96 (249)
T ss_pred HHHHcCCCCEEEECCCCC
Confidence 469999999964
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=6.5e-09 Score=100.53 Aligned_cols=82 Identities=17% Similarity=0.169 Sum_probs=67.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceE-EEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKS-LALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~-v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
..+++|+||+|++|+.++++|+++| ++ |++.+|+.++++...+++.. ...++.++.+|++|++++.++++
T Consensus 6 ~k~vlItGa~g~iG~~la~~l~~~G-------~~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~ 77 (260)
T PRK06198 6 GKVALVTGGTQGLGAAIARAFAERG-------AAGLVICGRNAEKGEAQAAELEA-LGAKAVFVQADLSDVEDCRRVVAA 77 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCC-------CCeEEEEcCCHHHHHHHHHHHHh-cCCeEEEEEccCCCHHHHHHHHHH
Confidence 3579999999999999999999998 66 99999998887766665531 13456778999999999888775
Q ss_pred ------CccEEeecCCCC
Q 012947 88 ------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (452)
++|+||||+|..
T Consensus 78 ~~~~~g~id~li~~ag~~ 95 (260)
T PRK06198 78 ADEAFGRLDALVNAAGLT 95 (260)
T ss_pred HHHHhCCCCEEEECCCcC
Confidence 479999999864
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.4e-08 Score=102.58 Aligned_cols=81 Identities=19% Similarity=0.252 Sum_probs=65.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHH--HHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQAL--QWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~--~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
..+|+|+||+||+|++++++|+++| ++|.+..|+.+...... ..+. ...++.++.+|++|++++.++++
T Consensus 9 ~~~vlItG~~GfIG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~ 79 (338)
T PLN00198 9 KKTACVIGGTGFLASLLIKLLLQKG-------YAVNTTVRDPENQKKIAHLRALQ--ELGDLKIFGADLTDEESFEAPIA 79 (338)
T ss_pred CCeEEEECCchHHHHHHHHHHHHCC-------CEEEEEECCCCCHHHHHHHHhcC--CCCceEEEEcCCCChHHHHHHHh
Confidence 4679999999999999999999998 78988888865543322 1221 11357889999999999999999
Q ss_pred CccEEeecCCCC
Q 012947 88 QTKLLLNCVGPY 99 (452)
Q Consensus 88 ~~dvVIn~aGp~ 99 (452)
++|+|||+|++.
T Consensus 80 ~~d~vih~A~~~ 91 (338)
T PLN00198 80 GCDLVFHVATPV 91 (338)
T ss_pred cCCEEEEeCCCC
Confidence 999999999864
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=5.5e-09 Score=100.67 Aligned_cols=82 Identities=17% Similarity=0.162 Sum_probs=66.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEE-EecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLAL-AGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~i-agR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
..+++|+||+|++|++++++|+++| .++++ ..|+.+++++..+++.. ...++.++.+|++|++++.++++
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~G-------~~v~i~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~i~~~~~~ 77 (254)
T PRK12746 6 GKVALVTGASRGIGRAIAMRLANDG-------ALVAIHYGRNKQAADETIREIES-NGGKAFLIEADLNSIDGVKKLVEQ 77 (254)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEcCCCHHHHHHHHHHHHh-cCCcEEEEEcCcCCHHHHHHHHHH
Confidence 3589999999999999999999998 67766 47888887777666531 12356788999999999988776
Q ss_pred ------------CccEEeecCCCC
Q 012947 88 ------------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------------~~dvVIn~aGp~ 99 (452)
++|+|||++|..
T Consensus 78 ~~~~~~~~~~~~~id~vi~~ag~~ 101 (254)
T PRK12746 78 LKNELQIRVGTSEIDILVNNAGIG 101 (254)
T ss_pred HHHHhccccCCCCccEEEECCCCC
Confidence 479999999864
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=4.7e-09 Score=101.54 Aligned_cols=81 Identities=14% Similarity=0.212 Sum_probs=69.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
+..+++|+||+|++|+.++++|+++| ++|++++|+.+.++++.++.. ..++.++.+|++|++++.++++
T Consensus 10 ~~~~vlItGa~g~iG~~~a~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~ 79 (264)
T PRK12829 10 DGLRVLVTGGASGIGRAIAEAFAEAG-------ARVHVCDVSEAALAATAARLP---GAKVTATVADVADPAQVERVFDT 79 (264)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHh---cCceEEEEccCCCHHHHHHHHHH
Confidence 34689999999999999999999998 789999999988877766553 1256789999999999988775
Q ss_pred ------CccEEeecCCCC
Q 012947 88 ------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (452)
++|+|||++|..
T Consensus 80 ~~~~~~~~d~vi~~ag~~ 97 (264)
T PRK12829 80 AVERFGGLDVLVNNAGIA 97 (264)
T ss_pred HHHHhCCCCEEEECCCCC
Confidence 579999999965
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=98.91 E-value=4.5e-09 Score=100.80 Aligned_cols=81 Identities=17% Similarity=0.124 Sum_probs=68.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..++|+||||++|+.++++|++++ ++|++.+|+.++.+++.+++.. ...++.++.+|+.|.++++++++
T Consensus 4 ~~ilItGas~~iG~~la~~l~~~g-------~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~ 75 (250)
T TIGR03206 4 KTAIVTGGGGGIGGATCRRFAEEG-------AKVAVFDLNREAAEKVAADIRA-KGGNAQAFACDITDRDSVDTAVAAAE 75 (250)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC-------CEEEEecCCHHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 579999999999999999999998 7999999999888777665532 13467889999999999988876
Q ss_pred ----CccEEeecCCCC
Q 012947 88 ----QTKLLLNCVGPY 99 (452)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (452)
..|+|||++|..
T Consensus 76 ~~~~~~d~vi~~ag~~ 91 (250)
T TIGR03206 76 QALGPVDVLVNNAGWD 91 (250)
T ss_pred HHcCCCCEEEECCCCC
Confidence 579999999853
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=98.91 E-value=2.8e-09 Score=107.29 Aligned_cols=83 Identities=19% Similarity=0.206 Sum_probs=64.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCC--HHHHHHH-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTD--PPSLHRL- 85 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~-~~~~v~~v~~Dl~d--~~sl~~~- 85 (452)
...++|+||||+||++++++|+++| ++|++++|+.++++++.+++... ...++..+.+|+++ .+.++++
T Consensus 53 g~~~lITGAs~GIG~alA~~La~~G-------~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~ 125 (320)
T PLN02780 53 GSWALVTGPTDGIGKGFAFQLARKG-------LNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIK 125 (320)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC-------CCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHH
Confidence 3579999999999999999999998 79999999999999888776421 12356778899985 3444433
Q ss_pred --HcC--ccEEeecCCCC
Q 012947 86 --CSQ--TKLLLNCVGPY 99 (452)
Q Consensus 86 --~~~--~dvVIn~aGp~ 99 (452)
+.+ +|++|||||..
T Consensus 126 ~~~~~~didilVnnAG~~ 143 (320)
T PLN02780 126 ETIEGLDVGVLINNVGVS 143 (320)
T ss_pred HHhcCCCccEEEEecCcC
Confidence 333 55999999964
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.2e-08 Score=97.91 Aligned_cols=82 Identities=18% Similarity=0.175 Sum_probs=67.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..+++|+||+|++|+.++++|+++| .+|++.+|+.++++.+.+++.. ...++.++.+|++|.++++++++
T Consensus 6 ~k~vlItGasg~iG~~la~~l~~~g-------~~vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~ 77 (250)
T PRK07774 6 DKVAIVTGAAGGIGQAYAEALAREG-------ASVVVADINAEGAERVAKQIVA-DGGTAIAVQVDVSDPDSAKAMADAT 77 (250)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 7999999998887776665531 12356788999999999887766
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
..|+||||+|..
T Consensus 78 ~~~~~~id~vi~~ag~~ 94 (250)
T PRK07774 78 VSAFGGIDYLVNNAAIY 94 (250)
T ss_pred HHHhCCCCEEEECCCCc
Confidence 579999999964
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=6.2e-09 Score=100.78 Aligned_cols=82 Identities=15% Similarity=0.122 Sum_probs=65.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR-~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
.+++|+||+|++|+.++++|+++| ++|++..| +.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 3 k~vlItGas~giG~~~a~~l~~~G-------~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~ 74 (256)
T PRK12743 3 QVAIVTASDSGIGKACALLLAQQG-------FDIGITWHSDEEGAKETAEEVRS-HGVRAEIRQLDLSDLPEGAQALDKL 74 (256)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCCChHHHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHHH
Confidence 379999999999999999999998 78888764 66666666655532 23467889999999999887776
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
..|+||||+|...
T Consensus 75 ~~~~~~id~li~~ag~~~ 92 (256)
T PRK12743 75 IQRLGRIDVLVNNAGAMT 92 (256)
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 4799999998643
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=4.4e-09 Score=101.71 Aligned_cols=82 Identities=17% Similarity=0.123 Sum_probs=67.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCC-CCCccEEEEeCCCHHHHHHHHc--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSH-SLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~-~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..++|+||+|++|+.++++|++++ ++|++++|+.++++++.+++.... ..++.++.+|++|++++.++++
T Consensus 3 k~ilItG~~~~IG~~la~~l~~~g-------~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~ 75 (259)
T PRK12384 3 QVAVVIGGGQTLGAFLCHGLAEEG-------YRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGV 75 (259)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHH
Confidence 469999999999999999999998 899999999888877766553101 1357889999999999887775
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
+.|+|||++|..
T Consensus 76 ~~~~~~id~vv~~ag~~ 92 (259)
T PRK12384 76 DEIFGRVDLLVYNAGIA 92 (259)
T ss_pred HHHcCCCCEEEECCCcC
Confidence 469999999854
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=6e-09 Score=100.96 Aligned_cols=83 Identities=19% Similarity=0.217 Sum_probs=69.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|++|+.+++.|+++| ++|++++|+.++++++.+++......++.++.+|++|+++++++++
T Consensus 7 ~k~vlItG~~~giG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 79 (259)
T PRK06125 7 GKRVLITGASKGIGAAAAEAFAAEG-------CHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEA 79 (259)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHh
Confidence 3689999999999999999999998 7999999999988887766642113457788999999999988776
Q ss_pred -CccEEeecCCCC
Q 012947 88 -QTKLLLNCVGPY 99 (452)
Q Consensus 88 -~~dvVIn~aGp~ 99 (452)
++|+||||+|..
T Consensus 80 g~id~lv~~ag~~ 92 (259)
T PRK06125 80 GDIDILVNNAGAI 92 (259)
T ss_pred CCCCEEEECCCCC
Confidence 589999999864
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=9.2e-09 Score=99.64 Aligned_cols=79 Identities=11% Similarity=0.096 Sum_probs=64.2
Q ss_pred CCeEEEEcCC--chHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 10 LFDVIILGAS--GFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 10 ~~~ilV~GAT--G~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
...++|+||+ +.||+.+++.|+++| ++|++.+|+. +.++..+++. ...+.++.+|++|+++++++++
T Consensus 7 ~k~~lItGas~~~gIG~a~a~~la~~G-------~~Vi~~~r~~-~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~ 75 (252)
T PRK06079 7 GKKIVVMGVANKRSIAWGCAQAIKDQG-------ATVIYTYQND-RMKKSLQKLV---DEEDLLVECDVASDESIERAFA 75 (252)
T ss_pred CCEEEEeCCCCCCchHHHHHHHHHHCC-------CEEEEecCch-HHHHHHHhhc---cCceeEEeCCCCCHHHHHHHHH
Confidence 3579999999 799999999999998 8999999984 4445455543 2356788999999999988765
Q ss_pred -------CccEEeecCCCC
Q 012947 88 -------QTKLLLNCVGPY 99 (452)
Q Consensus 88 -------~~dvVIn~aGp~ 99 (452)
+.|+||||||..
T Consensus 76 ~~~~~~g~iD~lv~nAg~~ 94 (252)
T PRK06079 76 TIKERVGKIDGIVHAIAYA 94 (252)
T ss_pred HHHHHhCCCCEEEEccccc
Confidence 479999999964
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=5.2e-09 Score=101.65 Aligned_cols=83 Identities=12% Similarity=0.089 Sum_probs=66.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR-~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++|+||+++||+.+++.|++.| ++|++++| +.++++.+.+++......++.++.+|++|+++++++++
T Consensus 8 ~k~vlItGas~gIG~~ia~~l~~~G-------~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 80 (260)
T PRK08416 8 GKTLVISGGTRGIGKAIVYEFAQSG-------VNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKK 80 (260)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH
Confidence 4589999999999999999999998 78888765 66777666655532113467889999999999988776
Q ss_pred ------CccEEeecCCCC
Q 012947 88 ------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (452)
++|+||||||..
T Consensus 81 ~~~~~g~id~lv~nAg~~ 98 (260)
T PRK08416 81 IDEDFDRVDFFISNAIIS 98 (260)
T ss_pred HHHhcCCccEEEECcccc
Confidence 479999999854
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=98.90 E-value=6.5e-09 Score=99.29 Aligned_cols=79 Identities=19% Similarity=0.194 Sum_probs=67.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..+++|+||||++|+.+++.|++++ ..|.+.+|+.++++++.+.+. .++.++.+|++|.++++++++
T Consensus 6 ~~~vlItGa~g~iG~~la~~l~~~g-------~~v~~~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~ 74 (245)
T PRK12936 6 GRKALVTGASGGIGEEIARLLHAQG-------AIVGLHGTRVEKLEALAAELG----ERVKIFPANLSDRDEVKALGQKA 74 (245)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC-------CEEEEEcCCHHHHHHHHHHhC----CceEEEEccCCCHHHHHHHHHHH
Confidence 4589999999999999999999998 788899999999888776552 367888999999999988764
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
++|+||||+|..
T Consensus 75 ~~~~~~id~vi~~ag~~ 91 (245)
T PRK12936 75 EADLEGVDILVNNAGIT 91 (245)
T ss_pred HHHcCCCCEEEECCCCC
Confidence 579999999864
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=5.1e-09 Score=102.10 Aligned_cols=82 Identities=15% Similarity=0.119 Sum_probs=67.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~- 88 (452)
...++|+||+|+||+.++++|+++| ++|++++|+.+++++..+++.. ...++.++.+|++|++++++++++
T Consensus 9 ~k~ilItGasggIG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~i~~~~~~~ 80 (264)
T PRK07576 9 GKNVVVVGGTSGINLGIAQAFARAG-------ANVAVASRSQEKVDAAVAQLQQ-AGPEGLGVSADVRDYAAVEAAFAQI 80 (264)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHH-hCCceEEEECCCCCHHHHHHHHHHH
Confidence 3589999999999999999999988 7999999999888776655532 123567789999999999887764
Q ss_pred ------ccEEeecCCCC
Q 012947 89 ------TKLLLNCVGPY 99 (452)
Q Consensus 89 ------~dvVIn~aGp~ 99 (452)
+|+||||+|..
T Consensus 81 ~~~~~~iD~vi~~ag~~ 97 (264)
T PRK07576 81 ADEFGPIDVLVSGAAGN 97 (264)
T ss_pred HHHcCCCCEEEECCCCC
Confidence 69999999854
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=5.1e-09 Score=104.33 Aligned_cols=84 Identities=19% Similarity=0.129 Sum_probs=69.1
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHc
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~-~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
+...++|+||+|+||+++++.|+++| ++|++++|+.+++++..+++.. ....++.++.+|++|.++++++++
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G-------~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~ 87 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKG-------AHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAAD 87 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHH
Confidence 34679999999999999999999998 7999999999887776655531 012357788999999999988776
Q ss_pred -------CccEEeecCCCC
Q 012947 88 -------QTKLLLNCVGPY 99 (452)
Q Consensus 88 -------~~dvVIn~aGp~ 99 (452)
+.|+||||||..
T Consensus 88 ~~~~~~~~iD~li~nAg~~ 106 (306)
T PRK06197 88 ALRAAYPRIDLLINNAGVM 106 (306)
T ss_pred HHHhhCCCCCEEEECCccc
Confidence 479999999964
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.6e-08 Score=99.33 Aligned_cols=114 Identities=15% Similarity=0.168 Sum_probs=83.2
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC--CCCCCccEEEEeCCCHHHHHHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--SHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~--~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
..+.++|||++.+||+.+|+.|++.| .+|++++|+.+++++...++.. ....++..+.+|+++++.+++++
T Consensus 7 ~gkvalVTG~s~GIG~aia~~la~~G-------a~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~ 79 (270)
T KOG0725|consen 7 AGKVALVTGGSSGIGKAIALLLAKAG-------AKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLV 79 (270)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHH
Confidence 34679999999999999999999999 8999999999999888777642 11345788999999987776665
Q ss_pred c--------CccEEeecCCCCCCCCHHHHHHHHHhC--CcEEEecCcHHHHHHH
Q 012947 87 S--------QTKLLLNCVGPYRLHGDPVAAACVHSG--CDYLDISGEPEFMERM 130 (452)
Q Consensus 87 ~--------~~dvVIn~aGp~~~~~~~vv~ac~~~g--~~yvDlsge~~~~~~~ 130 (452)
+ +.|++|||||...... ++.+.-.+.. +.-+++.|....+...
T Consensus 80 ~~~~~~~~GkidiLvnnag~~~~~~-~~~~~s~e~~d~~~~~Nl~G~~~~~~~~ 132 (270)
T KOG0725|consen 80 EFAVEKFFGKIDILVNNAGALGLTG-SILDLSEEVFDKIMATNLRGSAFCLKQA 132 (270)
T ss_pred HHHHHHhCCCCCEEEEcCCcCCCCC-ChhhCCHHHHHHHHhhhchhHHHHHHHH
Confidence 4 5899999999765443 3344333332 3345555544444443
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=7e-09 Score=100.41 Aligned_cols=82 Identities=17% Similarity=0.224 Sum_probs=68.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..+++|+||+|++|+.++++|+++| ++|++++|+.++++.+.+++.. ...++.++.+|++|+++++++++
T Consensus 12 ~k~ilItGa~g~IG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~i~~-~~~~~~~~~~Dl~d~~~i~~~~~~~ 83 (259)
T PRK08213 12 GKTALVTGGSRGLGLQIAEALGEAG-------ARVVLSARKAEELEEAAAHLEA-LGIDALWIAADVADEADIERLAEET 83 (259)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEEccCCCHHHHHHHHHHH
Confidence 3679999999999999999999988 7999999999888777766532 12456789999999999977665
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
..|+||||+|..
T Consensus 84 ~~~~~~id~vi~~ag~~ 100 (259)
T PRK08213 84 LERFGHVDILVNNAGAT 100 (259)
T ss_pred HHHhCCCCEEEECCCCC
Confidence 479999999853
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.88 E-value=5.8e-09 Score=100.10 Aligned_cols=82 Identities=20% Similarity=0.164 Sum_probs=65.2
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC-hhHHHHHHHHhCCCC-CCCccEEEEeCCCHHHHHHHHc--
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-PTRVKQALQWASPSH-SLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~-~~kl~~l~~~l~~~~-~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
+++|+||+|++|+.+++.|+++| ++|++++|+ .++++++.+++.... ...+..+.+|++|++++.++++
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 73 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQG-------AKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQA 73 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHH
Confidence 38999999999999999999998 899999998 777777766653201 1123457899999999987765
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
++|+||||+|...
T Consensus 74 ~~~~~~id~vi~~ag~~~ 91 (251)
T PRK07069 74 ADAMGGLSVLVNNAGVGS 91 (251)
T ss_pred HHHcCCccEEEECCCcCC
Confidence 4699999999654
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.88 E-value=8.1e-09 Score=99.88 Aligned_cols=83 Identities=23% Similarity=0.208 Sum_probs=69.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~-~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++|+||+|++|+.+++.|+++| ++|++++|+.++++++.+++... ...++..+.+|++|++++.++++
T Consensus 9 ~k~~lItGa~~gIG~~~a~~l~~~G-------~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 81 (257)
T PRK09242 9 GQTALITGASKGIGLAIAREFLGLG-------ADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDW 81 (257)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHH
Confidence 4689999999999999999999998 79999999999888877766321 12467788999999998877665
Q ss_pred ------CccEEeecCCCC
Q 012947 88 ------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (452)
+.|+|||++|..
T Consensus 82 ~~~~~g~id~li~~ag~~ 99 (257)
T PRK09242 82 VEDHWDGLHILVNNAGGN 99 (257)
T ss_pred HHHHcCCCCEEEECCCCC
Confidence 469999999863
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=98.88 E-value=7.6e-09 Score=99.31 Aligned_cols=80 Identities=21% Similarity=0.201 Sum_probs=63.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh-HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~-kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
..+++|+||+|++|+.++++|+++| ++|++.+|+.. ++.+..+++ ..++.++.+|++|++++.++++
T Consensus 5 ~k~vlItGas~gIG~~ia~~l~~~G-------~~vi~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~ 73 (248)
T TIGR01832 5 GKVALVTGANTGLGQGIAVGLAEAG-------ADIVGAGRSEPSETQQQVEAL----GRRFLSLTADLSDIEAIKALVDS 73 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEcCchHHHHHHHHHhc----CCceEEEECCCCCHHHHHHHHHH
Confidence 4589999999999999999999998 79999999753 233333332 2467889999999999987765
Q ss_pred ------CccEEeecCCCCC
Q 012947 88 ------QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (452)
+.|+||||+|...
T Consensus 74 ~~~~~~~~d~li~~ag~~~ 92 (248)
T TIGR01832 74 AVEEFGHIDILVNNAGIIR 92 (248)
T ss_pred HHHHcCCCCEEEECCCCCC
Confidence 4899999998643
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.88 E-value=6.2e-09 Score=100.44 Aligned_cols=74 Identities=20% Similarity=0.237 Sum_probs=62.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~- 88 (452)
...++|+||+|++|+.++++|++++ ++|++++|+.++ +. ...++.++.+|++|++++++++++
T Consensus 6 ~k~~lItGas~gIG~~la~~l~~~g-------~~v~~~~r~~~~-----~~----~~~~~~~~~~D~~~~~~~~~~~~~~ 69 (252)
T PRK07856 6 GRVVLVTGGTRGIGAGIARAFLAAG-------ATVVVCGRRAPE-----TV----DGRPAEFHAADVRDPDQVAALVDAI 69 (252)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCChhh-----hh----cCCceEEEEccCCCHHHHHHHHHHH
Confidence 4689999999999999999999998 799999998765 11 124678899999999999888764
Q ss_pred ------ccEEeecCCCC
Q 012947 89 ------TKLLLNCVGPY 99 (452)
Q Consensus 89 ------~dvVIn~aGp~ 99 (452)
.|+||||+|..
T Consensus 70 ~~~~~~id~vi~~ag~~ 86 (252)
T PRK07856 70 VERHGRLDVLVNNAGGS 86 (252)
T ss_pred HHHcCCCCEEEECCCCC
Confidence 59999999964
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=98.88 E-value=6.4e-09 Score=100.77 Aligned_cols=81 Identities=23% Similarity=0.251 Sum_probs=66.5
Q ss_pred eEEEEcCCchHHHHHHHHHHH----cCCCCCCCceEEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHH
Q 012947 12 DVIILGASGFTGKYVVREALK----LFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~----~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~-~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
.++|+||+++||+.++++|++ .| ++|++++|+.++++++.+++... ...++.++.+|++|++++++++
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~ 74 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPG-------SVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLL 74 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCC-------cEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHH
Confidence 489999999999999999997 45 79999999999998888777421 1235778899999999998877
Q ss_pred cCc-----------cEEeecCCCC
Q 012947 87 SQT-----------KLLLNCVGPY 99 (452)
Q Consensus 87 ~~~-----------dvVIn~aGp~ 99 (452)
+.+ |+||||||..
T Consensus 75 ~~~~~~~g~~~~~~~~lv~nAG~~ 98 (256)
T TIGR01500 75 KALRELPRPKGLQRLLLINNAGTL 98 (256)
T ss_pred HHHHhccccCCCceEEEEeCCccc
Confidence 532 5899999964
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.88 E-value=8.4e-09 Score=97.35 Aligned_cols=77 Identities=23% Similarity=0.280 Sum_probs=65.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
++++|+||+|++|+.++++|+++ ++|.+.+|+.++++++.++. ..+.++.+|++|++++.++++
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~--------~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~ 70 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT--------HTLLLGGRPAERLDELAAEL-----PGATPFPVDLTDPEAIAAAVEQLG 70 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh--------CCEEEEeCCHHHHHHHHHHh-----ccceEEecCCCCHHHHHHHHHhcC
Confidence 47999999999999999999976 37899999998877765543 257889999999999999887
Q ss_pred CccEEeecCCCCC
Q 012947 88 QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ~~dvVIn~aGp~~ 100 (452)
++|+|||++|...
T Consensus 71 ~id~vi~~ag~~~ 83 (227)
T PRK08219 71 RLDVLVHNAGVAD 83 (227)
T ss_pred CCCEEEECCCcCC
Confidence 5899999999753
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=2.3e-08 Score=95.61 Aligned_cols=83 Identities=12% Similarity=0.175 Sum_probs=64.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCC--HHHHHHHH-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTD--PPSLHRLC- 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d--~~sl~~~~- 86 (452)
..+++|+||+|++|+.++++|+++| ++|++.+|+.++++++.+++.......+.++.+|+.| .+++.+++
T Consensus 6 ~k~vlItG~sggiG~~la~~l~~~g-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 78 (239)
T PRK08703 6 DKTILVTGASQGLGEQVAKAYAAAG-------ATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAA 78 (239)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHcC-------CEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHH
Confidence 3589999999999999999999988 7999999999988887776632112356678899875 34554443
Q ss_pred -------cCccEEeecCCCC
Q 012947 87 -------SQTKLLLNCVGPY 99 (452)
Q Consensus 87 -------~~~dvVIn~aGp~ 99 (452)
...|+||||+|..
T Consensus 79 ~i~~~~~~~id~vi~~ag~~ 98 (239)
T PRK08703 79 TIAEATQGKLDGIVHCAGYF 98 (239)
T ss_pred HHHHHhCCCCCEEEEecccc
Confidence 3579999999953
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=2.6e-08 Score=96.42 Aligned_cols=106 Identities=12% Similarity=0.003 Sum_probs=73.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
..++|+||+|++|+.+++.|+++| ++|++.+|+.....+. .. ......+.+|++|.+++.+.+.+.|
T Consensus 15 k~~lITGas~gIG~ala~~l~~~G-------~~Vi~~~r~~~~~~~~--~~----~~~~~~~~~D~~~~~~~~~~~~~iD 81 (245)
T PRK12367 15 KRIGITGASGALGKALTKAFRAKG-------AKVIGLTHSKINNSES--ND----ESPNEWIKWECGKEESLDKQLASLD 81 (245)
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCC-------CEEEEEECCchhhhhh--hc----cCCCeEEEeeCCCHHHHHHhcCCCC
Confidence 579999999999999999999998 7999999987322111 11 1122578899999999999999999
Q ss_pred EEeecCCCCCCC--CHHHHHHHHHhCCcEEEecCcHHHHHHHHHHH
Q 012947 91 LLLNCVGPYRLH--GDPVAAACVHSGCDYLDISGEPEFMERMEARY 134 (452)
Q Consensus 91 vVIn~aGp~~~~--~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~ 134 (452)
++|||||..... .....+... .+|+.+....++.+.+.+
T Consensus 82 ilVnnAG~~~~~~~~~~~~~~~~-----~vN~~g~~~l~~~~~~~m 122 (245)
T PRK12367 82 VLILNHGINPGGRQDPENINKAL-----EINALSSWRLLELFEDIA 122 (245)
T ss_pred EEEECCccCCcCCCCHHHHHHHH-----HHHhHHHHHHHHHHHHHH
Confidence 999999964321 111222222 245555566666665544
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=8e-09 Score=98.79 Aligned_cols=81 Identities=15% Similarity=0.167 Sum_probs=68.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||++.+|+.+++.|+++| ++|++.+|+.++++++.+++.. ...++..+.+|+.|+++++++++
T Consensus 5 ~k~~lVtGas~GIG~aia~~la~~G-------~~V~~~~r~~~~l~~~~~~i~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 76 (227)
T PRK08862 5 SSIILITSAGSVLGRTISCHFARLG-------ATLILCDQDQSALKDTYEQCSA-LTDNVYSFQLKDFSQESIRHLFDAI 76 (227)
T ss_pred CeEEEEECCccHHHHHHHHHHHHCC-------CEEEEEcCCHHHHHHHHHHHHh-cCCCeEEEEccCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 7999999999999888776642 12356678899999999987653
Q ss_pred ------CccEEeecCCC
Q 012947 88 ------QTKLLLNCVGP 98 (452)
Q Consensus 88 ------~~dvVIn~aGp 98 (452)
+.|++|||+|.
T Consensus 77 ~~~~g~~iD~li~nag~ 93 (227)
T PRK08862 77 EQQFNRAPDVLVNNWTS 93 (227)
T ss_pred HHHhCCCCCEEEECCcc
Confidence 57999999984
|
|
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=98.87 E-value=5.9e-09 Score=100.24 Aligned_cols=102 Identities=20% Similarity=0.366 Sum_probs=81.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
.-+.|+|||||+|+.++..|++.| -++++--|..+---..++-++ +.+++-+...|+.|+++++++++..+
T Consensus 62 iVaTVFGAtGFlGryvvnklak~G-------SQviiPyR~d~~~~r~lkvmG--dLGQvl~~~fd~~DedSIr~vvk~sN 132 (391)
T KOG2865|consen 62 IVATVFGATGFLGRYVVNKLAKMG-------SQVIIPYRGDEYDPRHLKVMG--DLGQVLFMKFDLRDEDSIRAVVKHSN 132 (391)
T ss_pred eEEEEecccccccHHHHHHHhhcC-------CeEEEeccCCccchhheeecc--cccceeeeccCCCCHHHHHHHHHhCc
Confidence 457899999999999999999999 689999986543322233333 34688899999999999999999999
Q ss_pred EEeecCCCCCCC------------CHHHHHHHHHhCC-cEEEec
Q 012947 91 LLLNCVGPYRLH------------GDPVAAACVHSGC-DYLDIS 121 (452)
Q Consensus 91 vVIn~aGp~~~~------------~~~vv~ac~~~g~-~yvDls 121 (452)
||||..|--..+ .+.+++.|.+.|+ .||++|
T Consensus 133 VVINLIGrd~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS 176 (391)
T KOG2865|consen 133 VVINLIGRDYETKNFSFEDVNVHIAERLARICKEAGVERFIHVS 176 (391)
T ss_pred EEEEeeccccccCCcccccccchHHHHHHHHHHhhChhheeehh
Confidence 999999953222 1778888888888 588776
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=8e-09 Score=101.27 Aligned_cols=81 Identities=15% Similarity=0.107 Sum_probs=64.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhH-------HHHHHHHhCCCCCCCccEEEEeCCCHHHHH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR-------VKQALQWASPSHSLSIPILTADTTDPPSLH 83 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~k-------l~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~ 83 (452)
..++|+||+|++|+.++++|+++| ++|++.+|+.++ ++++.+++.. ...++.++.+|++|++++.
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~D~~~~~~i~ 78 (273)
T PRK08278 7 KTLFITGASRGIGLAIALRAARDG-------ANIVIAAKTAEPHPKLPGTIHTAAEEIEA-AGGQALPLVGDVRDEDQVA 78 (273)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-------CEEEEEecccccccchhhHHHHHHHHHHh-cCCceEEEEecCCCHHHHH
Confidence 479999999999999999999998 799999997653 4444444421 1346778899999999998
Q ss_pred HHHc-------CccEEeecCCCC
Q 012947 84 RLCS-------QTKLLLNCVGPY 99 (452)
Q Consensus 84 ~~~~-------~~dvVIn~aGp~ 99 (452)
++++ +.|+||||+|..
T Consensus 79 ~~~~~~~~~~g~id~li~~ag~~ 101 (273)
T PRK08278 79 AAVAKAVERFGGIDICVNNASAI 101 (273)
T ss_pred HHHHHHHHHhCCCCEEEECCCCc
Confidence 8776 579999999854
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.1e-08 Score=98.14 Aligned_cols=81 Identities=16% Similarity=0.128 Sum_probs=65.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEE-ecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~ia-gR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
.+++|+||+|++|+.++++|++++ ++++++ .|+.++++.+.+++.. ...++.++.+|++|+++++++++
T Consensus 3 k~ilItGas~giG~~la~~l~~~g-------~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~ 74 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARG-------WSVGINYARDAAAAEETADAVRA-AGGRACVVAGDVANEADVIAMFDAV 74 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCC-------CEEEEEeCCCHHHHHHHHHHHHh-cCCcEEEEEeccCCHHHHHHHHHHH
Confidence 379999999999999999999998 677765 4677777776665532 12467899999999999887765
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
++|+||||+|..
T Consensus 75 ~~~~~~id~li~~ag~~ 91 (248)
T PRK06947 75 QSAFGRLDALVNNAGIV 91 (248)
T ss_pred HHhcCCCCEEEECCccC
Confidence 589999999964
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.1e-08 Score=99.22 Aligned_cols=82 Identities=15% Similarity=0.049 Sum_probs=65.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh-hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~-~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++|+||+|++|+.+++.|+++| +++++..|+. ++++.+.+++.. ...++.++.+|++|.+++.++++
T Consensus 7 ~k~~lItGa~~gIG~~ia~~l~~~G-------~~vvi~~~~~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~i~~~~~~ 78 (261)
T PRK08936 7 GKVVVITGGSTGLGRAMAVRFGKEK-------AKVVINYRSDEEEANDVAEEIKK-AGGEAIAVKGDVTVESDVVNLIQT 78 (261)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCC-------CEEEEEeCCCHHHHHHHHHHHHH-cCCeEEEEEecCCCHHHHHHHHHH
Confidence 4689999999999999999999998 7888888854 455555555431 12456788999999999888775
Q ss_pred ------CccEEeecCCCC
Q 012947 88 ------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (452)
++|+|||++|..
T Consensus 79 ~~~~~g~id~lv~~ag~~ 96 (261)
T PRK08936 79 AVKEFGTLDVMINNAGIE 96 (261)
T ss_pred HHHHcCCCCEEEECCCCC
Confidence 479999999964
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=98.86 E-value=2e-08 Score=95.98 Aligned_cols=92 Identities=25% Similarity=0.352 Sum_probs=72.9
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhH--HHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR--VKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 13 ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~k--l~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
|+|+||||.+|+.+++.|++.+ ++|.++.|+..+ .+++ +. ..+.++.+|++|+++|.++++++|
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~-------~~V~~l~R~~~~~~~~~l-~~------~g~~vv~~d~~~~~~l~~al~g~d 66 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAG-------FSVRALVRDPSSDRAQQL-QA------LGAEVVEADYDDPESLVAALKGVD 66 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT-------GCEEEEESSSHHHHHHHH-HH------TTTEEEES-TT-HHHHHHHHTTCS
T ss_pred CEEECCccHHHHHHHHHHHhCC-------CCcEEEEeccchhhhhhh-hc------ccceEeecccCCHHHHHHHHcCCc
Confidence 7999999999999999999966 899999998743 2222 22 256888999999999999999999
Q ss_pred EEeecCCCCCC----CCHHHHHHHHHhCCc-EE
Q 012947 91 LLLNCVGPYRL----HGDPVAAACVHSGCD-YL 118 (452)
Q Consensus 91 vVIn~aGp~~~----~~~~vv~ac~~~g~~-yv 118 (452)
+||.+.++... ...++++||.+.|+. +|
T Consensus 67 ~v~~~~~~~~~~~~~~~~~li~Aa~~agVk~~v 99 (233)
T PF05368_consen 67 AVFSVTPPSHPSELEQQKNLIDAAKAAGVKHFV 99 (233)
T ss_dssp EEEEESSCSCCCHHHHHHHHHHHHHHHT-SEEE
T ss_pred eEEeecCcchhhhhhhhhhHHHhhhccccceEE
Confidence 99999986532 236799999999995 44
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=8.1e-09 Score=101.15 Aligned_cols=82 Identities=27% Similarity=0.233 Sum_probs=66.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~-~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..++|+||||++|+.+++.|+++| ++|++++|+.++++++.+++.. ....++.++.+|++|++++++ ++
T Consensus 4 k~~lItGasg~iG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~ 75 (280)
T PRK06914 4 KIAIVTGASSGFGLLTTLELAKKG-------YLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLV 75 (280)
T ss_pred CEEEEECCCchHHHHHHHHHHhCC-------CEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHH
Confidence 369999999999999999999998 8999999999888777655432 012467889999999998876 43
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
++|+||||+|...
T Consensus 76 ~~~~~~id~vv~~ag~~~ 93 (280)
T PRK06914 76 LKEIGRIDLLVNNAGYAN 93 (280)
T ss_pred HHhcCCeeEEEECCcccc
Confidence 4699999998643
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=98.85 E-value=1e-08 Score=101.00 Aligned_cols=94 Identities=12% Similarity=0.080 Sum_probs=76.3
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH-----
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC----- 86 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~----- 86 (452)
+|+|+||||++|++++++|++.+ ++|.++.|+.++.+ ..++..+.+|++|++++.+++
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g-------~~V~~~~R~~~~~~----------~~~~~~~~~d~~d~~~l~~a~~~~~~ 63 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAAS-------VPFLVASRSSSSSA----------GPNEKHVKFDWLDEDTWDNPFSSDDG 63 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCC-------CcEEEEeCCCcccc----------CCCCccccccCCCHHHHHHHHhcccC
Confidence 48999999999999999999988 79999999987642 125667789999999999998
Q ss_pred -cC-ccEEeecCCCCCC---CCHHHHHHHHHhCC-cEEEecC
Q 012947 87 -SQ-TKLLLNCVGPYRL---HGDPVAAACVHSGC-DYLDISG 122 (452)
Q Consensus 87 -~~-~dvVIn~aGp~~~---~~~~vv~ac~~~g~-~yvDlsg 122 (452)
++ +|.|++++++... ...+++++|.+.|+ |+|.+|.
T Consensus 64 ~~g~~d~v~~~~~~~~~~~~~~~~~i~aa~~~gv~~~V~~Ss 105 (285)
T TIGR03649 64 MEPEISAVYLVAPPIPDLAPPMIKFIDFARSKGVRRFVLLSA 105 (285)
T ss_pred cCCceeEEEEeCCCCCChhHHHHHHHHHHHHcCCCEEEEeec
Confidence 56 9999999875422 12578899999988 5666653
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.2e-08 Score=101.87 Aligned_cols=75 Identities=27% Similarity=0.449 Sum_probs=64.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
++|+|+||+||+|+++++.|++++ ++|.+.+|+.++...+. ...+.++.+|+.|.+++.++++++|
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~-------~~~~~~~~~D~~~~~~l~~~~~~~d 66 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQG-------EEVRVLVRPTSDRRNLE-------GLDVEIVEGDLRDPASLRKAVAGCR 66 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCC-------CEEEEEEecCccccccc-------cCCceEEEeeCCCHHHHHHHHhCCC
Confidence 369999999999999999999998 79999999877643221 2357889999999999999999999
Q ss_pred EEeecCCCC
Q 012947 91 LLLNCVGPY 99 (452)
Q Consensus 91 vVIn~aGp~ 99 (452)
+|||+++..
T Consensus 67 ~vi~~a~~~ 75 (328)
T TIGR03466 67 ALFHVAADY 75 (328)
T ss_pred EEEEeceec
Confidence 999999864
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.1e-08 Score=98.52 Aligned_cols=82 Identities=15% Similarity=0.061 Sum_probs=63.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEe-cChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAG-RNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iag-R~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++|+||+|+||+++++.|++.| ++|++.. |+.++++++..++.. ....+..+.+|++|.+++..+++
T Consensus 4 ~k~~lItGas~gIG~~ia~~l~~~G-------~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~ 75 (252)
T PRK12747 4 GKVALVTGASRGIGRAIAKRLANDG-------ALVAIHYGNRKEEAEETVYEIQS-NGGSAFSIGANLESLHGVEALYSS 75 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCC-------CeEEEEcCCCHHHHHHHHHHHHh-cCCceEEEecccCCHHHHHHHHHH
Confidence 3589999999999999999999998 7888864 667777766665532 12356678899999887765442
Q ss_pred ------------CccEEeecCCCC
Q 012947 88 ------------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------------~~dvVIn~aGp~ 99 (452)
+.|+||||||..
T Consensus 76 ~~~~~~~~~g~~~id~lv~~Ag~~ 99 (252)
T PRK12747 76 LDNELQNRTGSTKFDILINNAGIG 99 (252)
T ss_pred HHHHhhhhcCCCCCCEEEECCCcC
Confidence 589999999953
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=4e-08 Score=95.14 Aligned_cols=80 Identities=24% Similarity=0.272 Sum_probs=65.3
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCC-HHHHHHHH
Q 012947 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTD-PPSLHRLC 86 (452)
Q Consensus 8 ~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d-~~sl~~~~ 86 (452)
.+.++|+|+||||++|+.++++|++++ ++|++..|+.+++++...+ ..++.++.+|++| .+++.+.+
T Consensus 15 ~~~~~ilItGasG~iG~~l~~~L~~~g-------~~V~~~~R~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~~l~~~~ 82 (251)
T PLN00141 15 VKTKTVFVAGATGRTGKRIVEQLLAKG-------FAVKAGVRDVDKAKTSLPQ-----DPSLQIVRADVTEGSDKLVEAI 82 (251)
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhCC-------CEEEEEecCHHHHHHhccc-----CCceEEEEeeCCCCHHHHHHHh
Confidence 345789999999999999999999987 7999999998876544321 2357889999998 47787777
Q ss_pred -cCccEEeecCCCC
Q 012947 87 -SQTKLLLNCVGPY 99 (452)
Q Consensus 87 -~~~dvVIn~aGp~ 99 (452)
.++|+||+++|..
T Consensus 83 ~~~~d~vi~~~g~~ 96 (251)
T PLN00141 83 GDDSDAVICATGFR 96 (251)
T ss_pred hcCCCEEEECCCCC
Confidence 6899999998853
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.5e-08 Score=97.85 Aligned_cols=79 Identities=16% Similarity=0.161 Sum_probs=68.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~-- 88 (452)
.+++|+||||++|+.++++|+++| ++|++.+|+.++++.+.+++. ..++.++.+|+.|++++.+++++
T Consensus 3 k~ilItGat~~iG~~la~~L~~~g-------~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~ 72 (257)
T PRK07074 3 RTALVTGAAGGIGQALARRFLAAG-------DRVLALDIDAAALAAFADALG---DARFVPVACDLTDAASLAAALANAA 72 (257)
T ss_pred CEEEEECCcchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhc---CCceEEEEecCCCHHHHHHHHHHHH
Confidence 369999999999999999999988 799999999999888877663 34678899999999999887763
Q ss_pred -----ccEEeecCCCC
Q 012947 89 -----TKLLLNCVGPY 99 (452)
Q Consensus 89 -----~dvVIn~aGp~ 99 (452)
.|+|||++|..
T Consensus 73 ~~~~~~d~vi~~ag~~ 88 (257)
T PRK07074 73 AERGPVDVLVANAGAA 88 (257)
T ss_pred HHcCCCCEEEECCCCC
Confidence 79999999864
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=8.3e-09 Score=98.51 Aligned_cols=76 Identities=13% Similarity=0.152 Sum_probs=62.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..++|+||+|++|+.+++.|+++| ++|++.+|+.++..+..+.. .+.++.+|++|+++++++++
T Consensus 3 k~vlItGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~~ 69 (236)
T PRK06483 3 APILITGAGQRIGLALAWHLLAQG-------QPVIVSYRTHYPAIDGLRQA------GAQCIQADFSTNAGIMAFIDELK 69 (236)
T ss_pred ceEEEECCCChHHHHHHHHHHHCC-------CeEEEEeCCchhHHHHHHHc------CCEEEEcCCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 89999999886654333322 35788999999999887765
Q ss_pred ----CccEEeecCCCC
Q 012947 88 ----QTKLLLNCVGPY 99 (452)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (452)
+.|+||||+|..
T Consensus 70 ~~~~~id~lv~~ag~~ 85 (236)
T PRK06483 70 QHTDGLRAIIHNASDW 85 (236)
T ss_pred hhCCCccEEEECCccc
Confidence 379999999854
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.2e-08 Score=99.89 Aligned_cols=74 Identities=20% Similarity=0.189 Sum_probs=63.6
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc----
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~---- 87 (452)
.++|+||+|++|+.+++.|+++| ++|++.+|+.++++.+.+ .++..+.+|++|+++++++++
T Consensus 3 ~vlItGasggiG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~-------~~~~~~~~Dl~~~~~~~~~~~~~~~ 68 (274)
T PRK05693 3 VVLITGCSSGIGRALADAFKAAG-------YEVWATARKAEDVEALAA-------AGFTAVQLDVNDGAALARLAEELEA 68 (274)
T ss_pred EEEEecCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHH-------CCCeEEEeeCCCHHHHHHHHHHHHH
Confidence 69999999999999999999988 899999999988766543 246788999999999988775
Q ss_pred ---CccEEeecCCCC
Q 012947 88 ---QTKLLLNCVGPY 99 (452)
Q Consensus 88 ---~~dvVIn~aGp~ 99 (452)
++|+||||+|..
T Consensus 69 ~~~~id~vi~~ag~~ 83 (274)
T PRK05693 69 EHGGLDVLINNAGYG 83 (274)
T ss_pred hcCCCCEEEECCCCC
Confidence 579999999854
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=9.5e-09 Score=98.16 Aligned_cols=81 Identities=20% Similarity=0.191 Sum_probs=68.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEE-ecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~ia-gR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
.+++|+||||++|+.+++.|++++ ++++++ +|+.++++.+.+.+.. ...++.++.+|++|++++.++++
T Consensus 6 ~~ilI~Gasg~iG~~la~~l~~~g-------~~v~~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 77 (247)
T PRK05565 6 KVAIVTGASGGIGRAIAELLAKEG-------AKVVIAYDINEEAAQELLEEIKE-EGGDAIAVKADVSSEEDVENLVEQI 77 (247)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEcCCCHHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHH
Confidence 479999999999999999999988 788888 9998888777666532 12457889999999999988776
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
++|+|||++|..
T Consensus 78 ~~~~~~id~vi~~ag~~ 94 (247)
T PRK05565 78 VEKFGKIDILVNNAGIS 94 (247)
T ss_pred HHHhCCCCEEEECCCcC
Confidence 689999999975
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.3e-08 Score=98.18 Aligned_cols=81 Identities=16% Similarity=0.119 Sum_probs=64.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh-hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~-~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..++|+||+|++|+.+++.|++++ ++|++.+|+. +++++..+.+.. ...++.++.+|++|++++.++++
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g-------~~vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 74 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAG-------FDLAINDRPDDEELAATQQELRA-LGVEVIFFPADVADLSAHEAMLDAA 74 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEecCchhHHHHHHHHHHh-cCCceEEEEecCCCHHHHHHHHHHH
Confidence 469999999999999999999998 7899999864 455555554421 12467889999999999887765
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
.+|+||||+|..
T Consensus 75 ~~~~~~id~vi~~ag~~ 91 (256)
T PRK12745 75 QAAWGRIDCLVNNAGVG 91 (256)
T ss_pred HHhcCCCCEEEECCccC
Confidence 579999999853
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.6e-08 Score=96.75 Aligned_cols=83 Identities=14% Similarity=0.044 Sum_probs=65.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec----ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR----NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR----~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
.++++|+||+|++|+.++++|++++ +++++.+| +.++++++.+++.. ...++.++.+|++|+++++++
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~g-------~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~ 77 (249)
T PRK12827 6 SRRVLITGGSGGLGRAIAVRLAADG-------ADVIVLDIHPMRGRAEADAVAAGIEA-AGGKALGLAFDVRDFAATRAA 77 (249)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC-------CeEEEEcCcccccHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHH
Confidence 3689999999999999999999998 78888654 45566665555531 134678899999999999888
Q ss_pred Hc-------CccEEeecCCCCC
Q 012947 86 CS-------QTKLLLNCVGPYR 100 (452)
Q Consensus 86 ~~-------~~dvVIn~aGp~~ 100 (452)
++ ++|+|||++|...
T Consensus 78 ~~~~~~~~~~~d~vi~~ag~~~ 99 (249)
T PRK12827 78 LDAGVEEFGRLDILVNNAGIAT 99 (249)
T ss_pred HHHHHHHhCCCCEEEECCCCCC
Confidence 74 5799999999654
|
|
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.84 E-value=2.4e-08 Score=104.62 Aligned_cols=108 Identities=19% Similarity=0.233 Sum_probs=88.2
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHc
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~-~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
...+|+||||+|-+|+.+|+++++.+| .++++.+|++-++.....++... ...++..+.+|+.|.+.+.++++
T Consensus 249 ~gK~vLVTGagGSiGsel~~qil~~~p------~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~ 322 (588)
T COG1086 249 TGKTVLVTGGGGSIGSELCRQILKFNP------KEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAME 322 (588)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHhcCC------CEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHh
Confidence 356899999999999999999999986 69999999999998887777531 13567888999999999999999
Q ss_pred C--ccEEeecCCC----CCCC------------CHHHHHHHHHhCC-cEEEecC
Q 012947 88 Q--TKLLLNCVGP----YRLH------------GDPVAAACVHSGC-DYLDISG 122 (452)
Q Consensus 88 ~--~dvVIn~aGp----~~~~------------~~~vv~ac~~~g~-~yvDlsg 122 (452)
+ +|+|+|+|.- ...+ .+++++||.++|+ ++|-+|.
T Consensus 323 ~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iST 376 (588)
T COG1086 323 GHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLIST 376 (588)
T ss_pred cCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEec
Confidence 8 9999999972 1111 1778888888888 4666654
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=3.1e-08 Score=95.37 Aligned_cols=81 Identities=11% Similarity=0.071 Sum_probs=68.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|+||++++++|+++| ++|++++|+.++++++.+++.. ...++.++.+|+.|.++++++++
T Consensus 8 ~k~vlItGas~gIG~~l~~~l~~~G-------~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 79 (252)
T PRK07035 8 GKIALVTGASRGIGEAIAKLLAQQG-------AHVIVSSRKLDGCQAVADAIVA-AGGKAEALACHIGEMEQIDALFAHI 79 (252)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 7999999999888887776632 12356788999999999887766
Q ss_pred -----CccEEeecCCC
Q 012947 88 -----QTKLLLNCVGP 98 (452)
Q Consensus 88 -----~~dvVIn~aGp 98 (452)
+.|+|||++|.
T Consensus 80 ~~~~~~id~li~~ag~ 95 (252)
T PRK07035 80 RERHGRLDILVNNAAA 95 (252)
T ss_pred HHHcCCCCEEEECCCc
Confidence 47999999985
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.1e-08 Score=98.81 Aligned_cols=81 Identities=15% Similarity=0.047 Sum_probs=67.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|++|+.++++|+++| .++++++|+++++ ++.+++.. ...++.++.+|++|++++.++++
T Consensus 7 ~~~ilItGasggiG~~la~~l~~~G-------~~v~~~~r~~~~~-~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 77 (258)
T PRK08628 7 DKVVIVTGGASGIGAAISLRLAEEG-------AIPVIFGRSAPDD-EFAEELRA-LQPRAEFVQVDLTDDAQCRDAVEQT 77 (258)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHcC-------CcEEEEcCChhhH-HHHHHHHh-cCCceEEEEccCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 7899999998877 55555431 13467889999999999988876
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
.+|+||||+|..
T Consensus 78 ~~~~~~id~vi~~ag~~ 94 (258)
T PRK08628 78 VAKFGRIDGLVNNAGVN 94 (258)
T ss_pred HHhcCCCCEEEECCccc
Confidence 479999999953
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=98.83 E-value=2e-08 Score=103.10 Aligned_cols=79 Identities=11% Similarity=0.078 Sum_probs=63.4
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 012947 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 7 ~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
+.++++|+|+|||||+|++++++|.++| ++|.+++|..... .... ...+.++.+|+.|.+.+.+++
T Consensus 18 ~~~~~~IlVtGgtGfIG~~l~~~L~~~G-------~~V~~v~r~~~~~---~~~~----~~~~~~~~~Dl~d~~~~~~~~ 83 (370)
T PLN02695 18 PSEKLRICITGAGGFIASHIARRLKAEG-------HYIIASDWKKNEH---MSED----MFCHEFHLVDLRVMENCLKVT 83 (370)
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHhCC-------CEEEEEEeccccc---cccc----cccceEEECCCCCHHHHHHHH
Confidence 4467899999999999999999999988 7999999864321 1100 113567889999999999999
Q ss_pred cCccEEeecCCCC
Q 012947 87 SQTKLLLNCVGPY 99 (452)
Q Consensus 87 ~~~dvVIn~aGp~ 99 (452)
+++|+|||+|+..
T Consensus 84 ~~~D~Vih~Aa~~ 96 (370)
T PLN02695 84 KGVDHVFNLAADM 96 (370)
T ss_pred hCCCEEEEccccc
Confidence 9999999999754
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.5e-08 Score=111.75 Aligned_cols=79 Identities=16% Similarity=0.173 Sum_probs=62.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHH-HHHHHc
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPS-LHRLCS 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~s-l~~~~~ 87 (452)
+.++|+|||||||+|++++++|++++. ++|++.+|+..+...+.. ..++.++.+|++|.++ ++++++
T Consensus 314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g------~~V~~l~r~~~~~~~~~~------~~~~~~~~gDl~d~~~~l~~~l~ 381 (660)
T PRK08125 314 RRTRVLILGVNGFIGNHLTERLLRDDN------YEVYGLDIGSDAISRFLG------HPRFHFVEGDISIHSEWIEYHIK 381 (660)
T ss_pred cCCEEEEECCCchHHHHHHHHHHhCCC------cEEEEEeCCchhhhhhcC------CCceEEEeccccCcHHHHHHHhc
Confidence 457899999999999999999998631 799999998765433211 2357889999998655 677889
Q ss_pred CccEEeecCCCC
Q 012947 88 QTKLLLNCVGPY 99 (452)
Q Consensus 88 ~~dvVIn~aGp~ 99 (452)
++|+|||+|+..
T Consensus 382 ~~D~ViHlAa~~ 393 (660)
T PRK08125 382 KCDVVLPLVAIA 393 (660)
T ss_pred CCCEEEECcccc
Confidence 999999999743
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.1e-08 Score=99.05 Aligned_cols=81 Identities=20% Similarity=0.165 Sum_probs=64.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..+++|+||+|++|+.++++|+++| ++|++++|+.+. ++..+++.. ...++.++.+|++|+++++++++
T Consensus 6 ~~~~lItG~s~giG~~la~~l~~~G-------~~Vv~~~r~~~~-~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~ 76 (263)
T PRK08226 6 GKTALITGALQGIGEGIARVFARHG-------ANLILLDISPEI-EKLADELCG-RGHRCTAVVADVRDPASVAAAIKRA 76 (263)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCC-------CEEEEecCCHHH-HHHHHHHHH-hCCceEEEECCCCCHHHHHHHHHHH
Confidence 3589999999999999999999998 799999998753 333333321 12456788999999999988876
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
+.|+||||+|..
T Consensus 77 ~~~~~~id~vi~~ag~~ 93 (263)
T PRK08226 77 KEKEGRIDILVNNAGVC 93 (263)
T ss_pred HHHcCCCCEEEECCCcC
Confidence 469999999964
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.1e-08 Score=109.44 Aligned_cols=78 Identities=19% Similarity=0.232 Sum_probs=68.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+++||+.+++.|+++| ++|++++|+.++++++.++++ .++..+.+|++|+++++++++
T Consensus 5 ~k~~lITGas~gIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~ 73 (520)
T PRK06484 5 SRVVLVTGAAGGIGRAACQRFARAG-------DQVVVADRNVERARERADSLG----PDHHALAMDVSDEAQIREGFEQL 73 (520)
T ss_pred CeEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhC----CceeEEEeccCCHHHHHHHHHHH
Confidence 3579999999999999999999998 799999999999988887763 356788999999999888775
Q ss_pred -----CccEEeecCCC
Q 012947 88 -----QTKLLLNCVGP 98 (452)
Q Consensus 88 -----~~dvVIn~aGp 98 (452)
+.|+||||+|.
T Consensus 74 ~~~~g~iD~li~nag~ 89 (520)
T PRK06484 74 HREFGRIDVLVNNAGV 89 (520)
T ss_pred HHHhCCCCEEEECCCc
Confidence 47999999986
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=2.9e-08 Score=94.19 Aligned_cols=77 Identities=25% Similarity=0.204 Sum_probs=64.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..++|+||+|++|+.++++|+++| ++|++++|+.++.+++. ++ .++.++.+|++|+++++++++
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~-~~-----~~~~~~~~D~~d~~~~~~~~~~~~ 68 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERG-------WQVTATVRGPQQDTALQ-AL-----PGVHIEKLDMNDPASLDQLLQRLQ 68 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCC-------CEEEEEeCCCcchHHHH-hc-----cccceEEcCCCCHHHHHHHHHHhh
Confidence 369999999999999999999998 79999999988765543 22 356788899999999988877
Q ss_pred --CccEEeecCCCCC
Q 012947 88 --QTKLLLNCVGPYR 100 (452)
Q Consensus 88 --~~dvVIn~aGp~~ 100 (452)
++|+|||++|...
T Consensus 69 ~~~id~vi~~ag~~~ 83 (225)
T PRK08177 69 GQRFDLLFVNAGISG 83 (225)
T ss_pred cCCCCEEEEcCcccC
Confidence 4799999998753
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=2.5e-08 Score=98.17 Aligned_cols=78 Identities=15% Similarity=0.149 Sum_probs=62.5
Q ss_pred CCeEEEEcCC--chHHHHHHHHHHHcCCCCCCCceEEEEEecCh---hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH
Q 012947 10 LFDVIILGAS--GFTGKYVVREALKLFNFPSSPIKSLALAGRNP---TRVKQALQWASPSHSLSIPILTADTTDPPSLHR 84 (452)
Q Consensus 10 ~~~ilV~GAT--G~iG~~va~~L~~~g~~~~~~~~~v~iagR~~---~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~ 84 (452)
...++|+||+ ++||+.+++.|+++| ++|++.+|+. ++++++.++++ .. .++.+|++|++++++
T Consensus 5 ~k~~lItGas~~~GIG~aiA~~la~~G-------~~Vil~~r~~~~~~~~~~~~~~~~----~~-~~~~~Dv~d~~~v~~ 72 (274)
T PRK08415 5 GKKGLIVGVANNKSIAYGIAKACFEQG-------AELAFTYLNEALKKRVEPIAQELG----SD-YVYELDVSKPEHFKS 72 (274)
T ss_pred CcEEEEECCCCCCCHHHHHHHHHHHCC-------CEEEEEecCHHHHHHHHHHHHhcC----Cc-eEEEecCCCHHHHHH
Confidence 3579999997 799999999999998 8999999985 34444444442 23 578899999999988
Q ss_pred HHc-------CccEEeecCCCC
Q 012947 85 LCS-------QTKLLLNCVGPY 99 (452)
Q Consensus 85 ~~~-------~~dvVIn~aGp~ 99 (452)
+++ +.|+||||||..
T Consensus 73 ~~~~i~~~~g~iDilVnnAG~~ 94 (274)
T PRK08415 73 LAESLKKDLGKIDFIVHSVAFA 94 (274)
T ss_pred HHHHHHHHcCCCCEEEECCccC
Confidence 775 469999999964
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=2e-08 Score=100.29 Aligned_cols=83 Identities=12% Similarity=0.105 Sum_probs=67.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC-hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~-~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++|+||+|+||+.++++|+++| .+|++.+|+ .++++++.+++.. ...++.++.+|++|++++.++++
T Consensus 12 ~k~~lVTGas~gIG~~ia~~L~~~G-------a~Vv~~~~~~~~~~~~~~~~i~~-~g~~~~~~~~Dv~d~~~~~~~~~~ 83 (306)
T PRK07792 12 GKVAVVTGAAAGLGRAEALGLARLG-------ATVVVNDVASALDASDVLDEIRA-AGAKAVAVAGDISQRATADELVAT 83 (306)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC-------CEEEEecCCchhHHHHHHHHHHh-cCCeEEEEeCCCCCHHHHHHHHHH
Confidence 4679999999999999999999998 789998875 4556666665532 13467789999999999988876
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
++|+||||||...
T Consensus 84 ~~~~g~iD~li~nAG~~~ 101 (306)
T PRK07792 84 AVGLGGLDIVVNNAGITR 101 (306)
T ss_pred HHHhCCCCEEEECCCCCC
Confidence 4799999999643
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=3e-08 Score=96.89 Aligned_cols=81 Identities=12% Similarity=0.118 Sum_probs=63.0
Q ss_pred CCeEEEEcCCc--hHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 10 LFDVIILGASG--FTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 10 ~~~ilV~GATG--~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
...++|+||++ .||+++++.|+++| ++|++.+|+ +++++..+++.. ....+..+.+|++|+++++++++
T Consensus 6 ~k~~lITGas~~~GIG~aia~~la~~G-------~~vil~~r~-~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~ 76 (262)
T PRK07984 6 GKRILVTGVASKLSIAYGIAQAMHREG-------AELAFTYQN-DKLKGRVEEFAA-QLGSDIVLPCDVAEDASIDAMFA 76 (262)
T ss_pred CCEEEEeCCCCCccHHHHHHHHHHHCC-------CEEEEEecc-hhHHHHHHHHHh-ccCCceEeecCCCCHHHHHHHHH
Confidence 35799999985 89999999999998 799999998 344444444421 12345678899999999998875
Q ss_pred -------CccEEeecCCCC
Q 012947 88 -------QTKLLLNCVGPY 99 (452)
Q Consensus 88 -------~~dvVIn~aGp~ 99 (452)
+.|+||||||..
T Consensus 77 ~~~~~~g~iD~linnAg~~ 95 (262)
T PRK07984 77 ELGKVWPKFDGFVHSIGFA 95 (262)
T ss_pred HHHhhcCCCCEEEECCccC
Confidence 469999999954
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=2.1e-08 Score=100.45 Aligned_cols=78 Identities=18% Similarity=0.228 Sum_probs=68.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||||++|++++++|+++| ++|++++|+.++++++.+++. ++.++.+|++|.++++++++
T Consensus 26 ~k~vlITGasggIG~~~a~~L~~~G-------~~Vv~~~R~~~~~~~~~~~l~-----~v~~~~~Dl~d~~~v~~~~~~~ 93 (315)
T PRK06196 26 GKTAIVTGGYSGLGLETTRALAQAG-------AHVIVPARRPDVAREALAGID-----GVEVVMLDLADLESVRAFAERF 93 (315)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhh-----hCeEEEccCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 799999999999888777652 47889999999999988775
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
++|+||||||..
T Consensus 94 ~~~~~~iD~li~nAg~~ 110 (315)
T PRK06196 94 LDSGRRIDILINNAGVM 110 (315)
T ss_pred HhcCCCCCEEEECCCCC
Confidence 579999999964
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.5e-08 Score=97.78 Aligned_cols=80 Identities=15% Similarity=0.088 Sum_probs=64.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|++|+.++++|+++| ++|++++|+.+.. +...++. ...+..+.+|++|++++.++++
T Consensus 15 ~k~vlItGas~~IG~~la~~l~~~G-------~~Vi~~~r~~~~~-~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (255)
T PRK06841 15 GKVAVVTGGASGIGHAIAELFAAKG-------ARVALLDRSEDVA-EVAAQLL---GGNAKGLVCDVSDSQSVEAAVAAV 83 (255)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHH-HHHHHhh---CCceEEEEecCCCHHHHHHHHHHH
Confidence 4579999999999999999999998 7999999988753 3334332 2356688999999999988776
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
+.|+||||+|...
T Consensus 84 ~~~~~~~d~vi~~ag~~~ 101 (255)
T PRK06841 84 ISAFGRIDILVNSAGVAL 101 (255)
T ss_pred HHHhCCCCEEEECCCCCC
Confidence 4699999999643
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.7e-08 Score=107.93 Aligned_cols=79 Identities=19% Similarity=0.126 Sum_probs=69.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|+||+.+++.|+++| ++|++.+|+.++++++.++++ .++..+.+|++|+++++++++
T Consensus 269 ~k~~lItGas~gIG~~~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~ 337 (520)
T PRK06484 269 PRVVAITGGARGIGRAVADRFAAAG-------DRLLIIDRDAEGAKKLAEALG----DEHLSVQADITDEAAVESAFAQI 337 (520)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhC----CceeEEEccCCCHHHHHHHHHHH
Confidence 4679999999999999999999998 799999999999988887663 356678999999999988776
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
..|+||||||..
T Consensus 338 ~~~~g~id~li~nAg~~ 354 (520)
T PRK06484 338 QARWGRLDVLVNNAGIA 354 (520)
T ss_pred HHHcCCCCEEEECCCCc
Confidence 379999999964
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.4e-08 Score=98.08 Aligned_cols=82 Identities=18% Similarity=0.091 Sum_probs=68.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|++|+.+++.|+++| .++++++|+.++++++.+++.. ...++.++.+|++|.+++.++++
T Consensus 11 ~k~vlVtG~s~gIG~~la~~l~~~G-------~~vv~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~i~~~~~~~ 82 (255)
T PRK06113 11 GKCAIITGAGAGIGKEIAITFATAG-------ASVVVSDINADAANHVVDEIQQ-LGGQAFACRCDITSEQELSALADFA 82 (255)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CeEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHH
Confidence 4689999999999999999999998 7899999999888777666531 12356788999999999988765
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
+.|+||||+|..
T Consensus 83 ~~~~~~~d~li~~ag~~ 99 (255)
T PRK06113 83 LSKLGKVDILVNNAGGG 99 (255)
T ss_pred HHHcCCCCEEEECCCCC
Confidence 469999999864
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=3.3e-08 Score=94.86 Aligned_cols=82 Identities=15% Similarity=0.034 Sum_probs=65.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh-HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~-kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
..+++|+||+|++|+.++++|+++| ++|++.+|+.+ +++.+.+++.. ...++.++.+|++|++++.++++
T Consensus 6 ~k~vlItGasggiG~~l~~~l~~~G-------~~V~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~ 77 (248)
T PRK07806 6 GKTALVTGSSRGIGADTAKILAGAG-------AHVVVNYRQKAPRANKVVAEIEA-AGGRASAVGADLTDEESVAALMDT 77 (248)
T ss_pred CcEEEEECCCCcHHHHHHHHHHHCC-------CEEEEEeCCchHhHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHH
Confidence 3579999999999999999999998 78999999753 45555554431 12356788999999999988776
Q ss_pred ------CccEEeecCCCC
Q 012947 88 ------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (452)
++|+|||++|..
T Consensus 78 ~~~~~~~~d~vi~~ag~~ 95 (248)
T PRK07806 78 AREEFGGLDALVLNASGG 95 (248)
T ss_pred HHHhCCCCcEEEECCCCC
Confidence 579999999854
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=2.6e-08 Score=95.20 Aligned_cols=82 Identities=18% Similarity=0.130 Sum_probs=64.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC-hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~-~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++|+||+|++|+.++++|+++| +++++..|+ ....+++.+++.. ...++.++.+|++|++++.++++
T Consensus 5 ~~~vlItG~~~~iG~~la~~l~~~g-------~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~ 76 (245)
T PRK12937 5 NKVAIVTGASRGIGAAIARRLAADG-------FAVAVNYAGSAAAADELVAEIEA-AGGRAIAVQADVADAAAVTRLFDA 76 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CEEEEecCCCHHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHH
Confidence 3579999999999999999999998 688777765 3445555554421 13467889999999999988877
Q ss_pred ------CccEEeecCCCC
Q 012947 88 ------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (452)
++|+|||++|..
T Consensus 77 ~~~~~~~id~vi~~ag~~ 94 (245)
T PRK12937 77 AETAFGRIDVLVNNAGVM 94 (245)
T ss_pred HHHHcCCCCEEEECCCCC
Confidence 579999999864
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.82 E-value=8.8e-09 Score=100.08 Aligned_cols=71 Identities=15% Similarity=0.079 Sum_probs=60.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|++|+.++++|+++| ++|++.+|+.++. .++.++.+|++|+++++++++
T Consensus 6 gk~vlItGas~gIG~~ia~~l~~~G-------~~Vi~~~r~~~~~------------~~~~~~~~D~~~~~~i~~~~~~~ 66 (258)
T PRK06398 6 DKVAIVTGGSQGIGKAVVNRLKEEG-------SNVINFDIKEPSY------------NDVDYFKVDVSNKEQVIKGIDYV 66 (258)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CeEEEEeCCcccc------------CceEEEEccCCCHHHHHHHHHHH
Confidence 3589999999999999999999998 7999999986432 246789999999999988776
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
+.|+||||+|..
T Consensus 67 ~~~~~~id~li~~Ag~~ 83 (258)
T PRK06398 67 ISKYGRIDILVNNAGIE 83 (258)
T ss_pred HHHcCCCCEEEECCCCC
Confidence 579999999853
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.7e-08 Score=96.70 Aligned_cols=82 Identities=18% Similarity=0.144 Sum_probs=67.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..+++|+||+|++|+.+++.|+++| .+|++.+|+.+++++..+++.. ...++..+.+|++|+++++++++
T Consensus 5 ~~~~lItG~~g~iG~~~a~~l~~~G-------~~vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 76 (253)
T PRK08217 5 DKVIVITGGAQGLGRAMAEYLAQKG-------AKLALIDLNQEKLEEAVAECGA-LGTEVRGYAANVTDEEDVEATFAQI 76 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHH
Confidence 4579999999999999999999998 7899999999888877766532 13456788999999988877665
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
..|+|||++|..
T Consensus 77 ~~~~~~id~vi~~ag~~ 93 (253)
T PRK08217 77 AEDFGQLNGLINNAGIL 93 (253)
T ss_pred HHHcCCCCEEEECCCcc
Confidence 369999999853
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=98.81 E-value=6e-08 Score=96.42 Aligned_cols=82 Identities=18% Similarity=0.236 Sum_probs=65.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh--HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT--RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~--kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
...|+|+|||||+|++++++|+++| ++|+++.|+.+ +..+....+.. ...++.++.+|++|.+++.+++.
T Consensus 6 ~k~vlVTGatG~IG~~lv~~Ll~~G-------~~V~~~~R~~~~~~~~~~~~~l~~-~~~~~~~~~~Dl~d~~~~~~~l~ 77 (297)
T PLN02583 6 SKSVCVMDASGYVGFWLVKRLLSRG-------YTVHAAVQKNGETEIEKEIRGLSC-EEERLKVFDVDPLDYHSILDALK 77 (297)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC-------CEEEEEEcCchhhhHHHHHHhccc-CCCceEEEEecCCCHHHHHHHHc
Confidence 3579999999999999999999998 89999999643 33333343321 12357889999999999999999
Q ss_pred CccEEeecCCCC
Q 012947 88 QTKLLLNCVGPY 99 (452)
Q Consensus 88 ~~dvVIn~aGp~ 99 (452)
++|.|+|++++.
T Consensus 78 ~~d~v~~~~~~~ 89 (297)
T PLN02583 78 GCSGLFCCFDPP 89 (297)
T ss_pred CCCEEEEeCccC
Confidence 999999988754
|
|
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.81 E-value=2.4e-08 Score=93.43 Aligned_cols=140 Identities=16% Similarity=0.169 Sum_probs=100.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~-~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++++|+.|+||+.+++.|+..+ .++.++.-+.|+.+..+ +|.+ .....+.++.+|+++.+++++.++
T Consensus 5 GKna~vtggagGIGl~~sk~Ll~kg-------ik~~~i~~~~En~~a~a-kL~ai~p~~~v~F~~~DVt~~~~~~~~f~k 76 (261)
T KOG4169|consen 5 GKNALVTGGAGGIGLATSKALLEKG-------IKVLVIDDSEENPEAIA-KLQAINPSVSVIFIKCDVTNRGDLEAAFDK 76 (261)
T ss_pred CceEEEecCCchhhHHHHHHHHHcC-------chheeehhhhhCHHHHH-HHhccCCCceEEEEEeccccHHHHHHHHHH
Confidence 3579999999999999999999998 67777777777765443 3332 234678899999999999988776
Q ss_pred ------CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEE---cCCCCCcchhhH
Q 012947 88 ------QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLV---SACGFDSIPAEL 158 (452)
Q Consensus 88 ------~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv---~~~G~~s~P~dl 158 (452)
..|++||.||..... -++. +.-+|++|-..-+...++.++.+--..|-+|| |..|+++.|- .
T Consensus 77 i~~~fg~iDIlINgAGi~~dk---d~e~-----Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~-~ 147 (261)
T KOG4169|consen 77 ILATFGTIDILINGAGILDDK---DWER-----TINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPV-F 147 (261)
T ss_pred HHHHhCceEEEEcccccccch---hHHH-----hhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCcccc-c
Confidence 479999999987633 2332 44678888877777765655544333444444 5569988884 4
Q ss_pred HHHHHhhh
Q 012947 159 GVMFNSRQ 166 (452)
Q Consensus 159 ~~~~~~~~ 166 (452)
.+|.++|+
T Consensus 148 pVY~AsKa 155 (261)
T KOG4169|consen 148 PVYAASKA 155 (261)
T ss_pred hhhhhccc
Confidence 56655543
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.3e-08 Score=97.71 Aligned_cols=80 Identities=16% Similarity=0.149 Sum_probs=66.3
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc----
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~---- 87 (452)
+++|+||+|++|+.++++|+++| ++|++++|+.++.+++.+++.. ...++.++.+|+.|++++.++++
T Consensus 3 ~vlItGa~g~lG~~l~~~l~~~g-------~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~ 74 (255)
T TIGR01963 3 TALVTGAASGIGLAIALALAAAG-------ANVVVNDLGEAGAEAAAKVATD-AGGSVIYLVADVTKEDEIADMIAAAAA 74 (255)
T ss_pred EEEEcCCcchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 69999999999999999999998 7999999999888777665531 12467889999999997766554
Q ss_pred ---CccEEeecCCCC
Q 012947 88 ---QTKLLLNCVGPY 99 (452)
Q Consensus 88 ---~~dvVIn~aGp~ 99 (452)
+.|+|||++|..
T Consensus 75 ~~~~~d~vi~~a~~~ 89 (255)
T TIGR01963 75 EFGGLDILVNNAGIQ 89 (255)
T ss_pred hcCCCCEEEECCCCC
Confidence 579999999864
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=6.2e-08 Score=89.30 Aligned_cols=103 Identities=14% Similarity=0.197 Sum_probs=82.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
++++|+||||++|. +++.|+++| ++|.+.+|+.++++.+...+. ...++.++.+|+.|++++.++++
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~G-------~~V~v~~R~~~~~~~l~~~l~--~~~~i~~~~~Dv~d~~sv~~~i~~~l 70 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEKG-------FHVSVIARREVKLENVKREST--TPESITPLPLDYHDDDALKLAIKSTI 70 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHCc-------CEEEEEECCHHHHHHHHHHhh--cCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 46999999988765 999999998 899999999988877766553 13467788899999999988876
Q ss_pred ----CccEEeecCCCCCCCCHHHHHHHHHhCCc-----EEEecCcHH
Q 012947 88 ----QTKLLLNCVGPYRLHGDPVAAACVHSGCD-----YLDISGEPE 125 (452)
Q Consensus 88 ----~~dvVIn~aGp~~~~~~~vv~ac~~~g~~-----yvDlsge~~ 125 (452)
..|++|+.+-.. ....+.++|.+.|++ ++++.|...
T Consensus 71 ~~~g~id~lv~~vh~~--~~~~~~~~~~~~gv~~~~~~~~h~~gs~~ 115 (177)
T PRK08309 71 EKNGPFDLAVAWIHSS--AKDALSVVCRELDGSSETYRLFHVLGSAA 115 (177)
T ss_pred HHcCCCeEEEEecccc--chhhHHHHHHHHccCCCCceEEEEeCCcC
Confidence 357888887432 337899999999988 888887655
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=98.81 E-value=4e-08 Score=100.80 Aligned_cols=83 Identities=19% Similarity=0.110 Sum_probs=66.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC---C--CCCCccEEEEeCCCHHHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP---S--HSLSIPILTADTTDPPSLH 83 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~---~--~~~~v~~v~~Dl~d~~sl~ 83 (452)
...+|+|+||+||+|++++++|+++| ++|++..|+.++++.+. ++.. . ...++.++.+|++|.+++.
T Consensus 52 ~~k~VLVTGatGfIG~~lv~~L~~~G-------~~V~~~~r~~~~~~~l~-~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~ 123 (367)
T PLN02686 52 EARLVCVTGGVSFLGLAIVDRLLRHG-------YSVRIAVDTQEDKEKLR-EMEMFGEMGRSNDGIWTVMANLTEPESLH 123 (367)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHH-HHhhhccccccCCceEEEEcCCCCHHHHH
Confidence 35689999999999999999999998 89998899887765542 2210 0 0124678899999999999
Q ss_pred HHHcCccEEeecCCCC
Q 012947 84 RLCSQTKLLLNCVGPY 99 (452)
Q Consensus 84 ~~~~~~dvVIn~aGp~ 99 (452)
++++++|.|||+++..
T Consensus 124 ~~i~~~d~V~hlA~~~ 139 (367)
T PLN02686 124 EAFDGCAGVFHTSAFV 139 (367)
T ss_pred HHHHhccEEEecCeee
Confidence 9999999999999864
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=3.9e-08 Score=95.59 Aligned_cols=86 Identities=17% Similarity=0.098 Sum_probs=65.3
Q ss_pred CCCCCCCCCCCeEEEEcCC--chHHHHHHHHHHHcCCCCCCCceEEEEEecChhH---HHHHHHHhCCCCCCCccEEEEe
Q 012947 1 MQAQSQIPELFDVIILGAS--GFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR---VKQALQWASPSHSLSIPILTAD 75 (452)
Q Consensus 1 ~~~~~~~~~~~~ilV~GAT--G~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~k---l~~l~~~l~~~~~~~v~~v~~D 75 (452)
||-.... +...++|+||+ +.||+.++++|+++| ++|++.+|+.+. ++++.+++ ..+.++.+|
T Consensus 2 ~~~~~~~-~~k~~lItGas~g~GIG~a~a~~la~~G-------~~v~l~~r~~~~~~~~~~~~~~~-----~~~~~~~~D 68 (258)
T PRK07533 2 MQPLLPL-AGKRGLVVGIANEQSIAWGCARAFRALG-------AELAVTYLNDKARPYVEPLAEEL-----DAPIFLPLD 68 (258)
T ss_pred CCccccc-CCCEEEEECCCCCCcHHHHHHHHHHHcC-------CEEEEEeCChhhHHHHHHHHHhh-----ccceEEecC
Confidence 4433333 34579999998 499999999999998 799999998643 44444443 234578899
Q ss_pred CCCHHHHHHHHc-------CccEEeecCCCC
Q 012947 76 TTDPPSLHRLCS-------QTKLLLNCVGPY 99 (452)
Q Consensus 76 l~d~~sl~~~~~-------~~dvVIn~aGp~ 99 (452)
++|+++++++++ +.|++|||||..
T Consensus 69 ~~~~~~v~~~~~~~~~~~g~ld~lv~nAg~~ 99 (258)
T PRK07533 69 VREPGQLEAVFARIAEEWGRLDFLLHSIAFA 99 (258)
T ss_pred cCCHHHHHHHHHHHHHHcCCCCEEEEcCccC
Confidence 999999988765 469999999864
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=3.4e-08 Score=95.58 Aligned_cols=80 Identities=21% Similarity=0.124 Sum_probs=63.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|++|++++++|+++| ++|++.+|+.. .+++.+++.. ...++.++.+|++|.+++.++++
T Consensus 8 ~k~vlVtGas~gIG~~la~~l~~~G-------~~v~~~~r~~~-~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 78 (260)
T PRK12823 8 GKVVVVTGAAQGIGRGVALRAAAEG-------ARVVLVDRSEL-VHEVAAELRA-AGGEALALTADLETYAGAQAAMAAA 78 (260)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCchH-HHHHHHHHHh-cCCeEEEEEEeCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 79999999853 3444444421 12356788999999998887776
Q ss_pred -----CccEEeecCCC
Q 012947 88 -----QTKLLLNCVGP 98 (452)
Q Consensus 88 -----~~dvVIn~aGp 98 (452)
+.|+||||||.
T Consensus 79 ~~~~~~id~lv~nAg~ 94 (260)
T PRK12823 79 VEAFGRIDVLINNVGG 94 (260)
T ss_pred HHHcCCCeEEEECCcc
Confidence 57999999984
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=9.6e-09 Score=99.44 Aligned_cols=73 Identities=14% Similarity=0.142 Sum_probs=61.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|++|+.++++|+++| ++|++++|+.++. . ..++.++.+|+.|+++++++++
T Consensus 9 ~k~vlItGas~gIG~~ia~~l~~~G-------~~v~~~~r~~~~~------~----~~~~~~~~~D~~~~~~~~~~~~~~ 71 (260)
T PRK06523 9 GKRALVTGGTKGIGAATVARLLEAG-------ARVVTTARSRPDD------L----PEGVEFVAADLTTAEGCAAVARAV 71 (260)
T ss_pred CCEEEEECCCCchhHHHHHHHHHCC-------CEEEEEeCChhhh------c----CCceeEEecCCCCHHHHHHHHHHH
Confidence 4679999999999999999999998 7999999987542 1 2357789999999998887654
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
+.|+||||+|..
T Consensus 72 ~~~~~~id~vi~~ag~~ 88 (260)
T PRK06523 72 LERLGGVDILVHVLGGS 88 (260)
T ss_pred HHHcCCCCEEEECCccc
Confidence 579999999953
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=2.2e-08 Score=96.32 Aligned_cols=77 Identities=18% Similarity=0.157 Sum_probs=62.3
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh-hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc-
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT- 89 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~-~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~- 89 (452)
.++|+||+|++|+.++++|++++ ++|++.+|+. +.++++.+.. ..++.++.+|++|+++++++++++
T Consensus 3 ~vlItGasggiG~~ia~~l~~~g-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~ 71 (251)
T PRK06924 3 YVIITGTSQGLGEAIANQLLEKG-------THVISISRTENKELTKLAEQY----NSNLTFHSLDLQDVHELETNFNEIL 71 (251)
T ss_pred EEEEecCCchHHHHHHHHHHhcC-------CEEEEEeCCchHHHHHHHhcc----CCceEEEEecCCCHHHHHHHHHHHH
Confidence 69999999999999999999998 7999999987 5555544432 246778999999999998887643
Q ss_pred ----------cEEeecCCCC
Q 012947 90 ----------KLLLNCVGPY 99 (452)
Q Consensus 90 ----------dvVIn~aGp~ 99 (452)
.++||++|..
T Consensus 72 ~~~~~~~~~~~~~v~~ag~~ 91 (251)
T PRK06924 72 SSIQEDNVSSIHLINNAGMV 91 (251)
T ss_pred HhcCcccCCceEEEEcceec
Confidence 1789999853
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=3.1e-08 Score=94.96 Aligned_cols=82 Identities=17% Similarity=0.098 Sum_probs=62.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEE-ecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~ia-gR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..++|+||||++|+.+++.|+++| +++++. +|+..+.++..+++.. ...++..+.+|++|.+++.++++
T Consensus 4 k~~lVtG~s~giG~~~a~~l~~~G-------~~vv~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 75 (246)
T PRK12938 4 RIAYVTGGMGGIGTSICQRLHKDG-------FKVVAGCGPNSPRRVKWLEDQKA-LGFDFIASEGNVGDWDSTKAAFDKV 75 (246)
T ss_pred CEEEEECCCChHHHHHHHHHHHcC-------CEEEEEcCCChHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 479999999999999999999998 677664 5555555555555421 12356677899999999888765
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
++|+||||+|...
T Consensus 76 ~~~~~~id~li~~ag~~~ 93 (246)
T PRK12938 76 KAEVGEIDVLVNNAGITR 93 (246)
T ss_pred HHHhCCCCEEEECCCCCC
Confidence 5799999999643
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=2.1e-08 Score=96.24 Aligned_cols=83 Identities=14% Similarity=0.139 Sum_probs=66.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEE-ecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~ia-gR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
...++|+||+|++|+.++++|++++ +++++. .|+.++++++.+++.. ...++.++.+|++|++++.+++++
T Consensus 6 ~~~~lItG~s~~iG~~la~~l~~~g-------~~v~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~ 77 (247)
T PRK12935 6 GKVAIVTGGAKGIGKAITVALAQEG-------AKVVINYNSSKEAAENLVNELGK-EGHDVYAVQADVSKVEDANRLVEE 77 (247)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcC-------CEEEEEcCCcHHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHH
Confidence 4589999999999999999999998 677665 4566777666665532 124578899999999999988875
Q ss_pred -------ccEEeecCCCCC
Q 012947 89 -------TKLLLNCVGPYR 100 (452)
Q Consensus 89 -------~dvVIn~aGp~~ 100 (452)
+|+||||+|...
T Consensus 78 ~~~~~~~id~vi~~ag~~~ 96 (247)
T PRK12935 78 AVNHFGKVDILVNNAGITR 96 (247)
T ss_pred HHHHcCCCCEEEECCCCCC
Confidence 699999999754
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=98.79 E-value=2.9e-08 Score=94.60 Aligned_cols=83 Identities=14% Similarity=0.108 Sum_probs=65.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh-HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~-kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
..+++|+||||++|+.++++|+++| ++|++..|+.. +.+...+++.. ...++.++.+|++|++++.++++
T Consensus 5 ~~~vlItG~sg~iG~~l~~~l~~~G-------~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~ 76 (248)
T PRK05557 5 GKVALVTGASRGIGRAIAERLAAQG-------ANVVINYASSEAGAEALVAEIGA-LGGKALAVQGDVSDAESVERAVDE 76 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCCchhHHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHH
Confidence 3589999999999999999999998 78888888655 34455444421 13467788899999999888766
Q ss_pred ------CccEEeecCCCCC
Q 012947 88 ------QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (452)
++|+|||++|...
T Consensus 77 ~~~~~~~id~vi~~ag~~~ 95 (248)
T PRK05557 77 AKAEFGGVDILVNNAGITR 95 (248)
T ss_pred HHHHcCCCCEEEECCCcCC
Confidence 5799999998643
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=98.79 E-value=4.6e-08 Score=99.32 Aligned_cols=79 Identities=15% Similarity=0.229 Sum_probs=64.1
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~-- 88 (452)
++|+|+|||||+|+++++.|++.| ++|++.+|+..........+. ...++.++.+|++|.+++.++++.
T Consensus 5 k~ilItGatG~IG~~l~~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~ 75 (349)
T TIGR02622 5 KKVLVTGHTGFKGSWLSLWLLELG-------AEVYGYSLDPPTSPNLFELLN--LAKKIEDHFGDIRDAAKLRKAIAEFK 75 (349)
T ss_pred CEEEEECCCChhHHHHHHHHHHCC-------CEEEEEeCCCccchhHHHHHh--hcCCceEEEccCCCHHHHHHHHhhcC
Confidence 579999999999999999999998 789999998765444333332 123567889999999999999985
Q ss_pred ccEEeecCCC
Q 012947 89 TKLLLNCVGP 98 (452)
Q Consensus 89 ~dvVIn~aGp 98 (452)
+|+|||+||.
T Consensus 76 ~d~vih~A~~ 85 (349)
T TIGR02622 76 PEIVFHLAAQ 85 (349)
T ss_pred CCEEEECCcc
Confidence 5999999984
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.79 E-value=2e-08 Score=95.82 Aligned_cols=74 Identities=26% Similarity=0.288 Sum_probs=64.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCce-EEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIK-SLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~-~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++|+||||++|+.++++|+++| . +|++.+|+.+++++ . ..++.++.+|+.|++++.++++
T Consensus 6 ~~~vlItGgsg~iG~~la~~l~~~G-------~~~V~~~~r~~~~~~~----~----~~~~~~~~~D~~~~~~~~~~~~~ 70 (238)
T PRK08264 6 GKVVLVTGANRGIGRAFVEQLLARG-------AAKVYAAARDPESVTD----L----GPRVVPLQLDVTDPASVAAAAEA 70 (238)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------cccEEEEecChhhhhh----c----CCceEEEEecCCCHHHHHHHHHh
Confidence 4679999999999999999999998 6 89999999887654 2 2467889999999999998887
Q ss_pred --CccEEeecCCC
Q 012947 88 --QTKLLLNCVGP 98 (452)
Q Consensus 88 --~~dvVIn~aGp 98 (452)
..|+|||++|.
T Consensus 71 ~~~id~vi~~ag~ 83 (238)
T PRK08264 71 ASDVTILVNNAGI 83 (238)
T ss_pred cCCCCEEEECCCc
Confidence 47999999997
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=6.9e-08 Score=94.82 Aligned_cols=78 Identities=15% Similarity=0.112 Sum_probs=62.4
Q ss_pred CCeEEEEcCC--chHHHHHHHHHHHcCCCCCCCceEEEEEecCh---hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH
Q 012947 10 LFDVIILGAS--GFTGKYVVREALKLFNFPSSPIKSLALAGRNP---TRVKQALQWASPSHSLSIPILTADTTDPPSLHR 84 (452)
Q Consensus 10 ~~~ilV~GAT--G~iG~~va~~L~~~g~~~~~~~~~v~iagR~~---~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~ 84 (452)
...++|+||+ +.||+.+++.|+++| ++|++.+|+. ++++++.++++ ....+.+|++|++++++
T Consensus 10 ~k~~lItGas~~~GIG~aia~~la~~G-------~~V~l~~r~~~~~~~~~~l~~~~~-----~~~~~~~Dl~~~~~v~~ 77 (272)
T PRK08159 10 GKRGLILGVANNRSIAWGIAKACRAAG-------AELAFTYQGDALKKRVEPLAAELG-----AFVAGHCDVTDEASIDA 77 (272)
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCC-------CEEEEEcCchHHHHHHHHHHHhcC-----CceEEecCCCCHHHHHH
Confidence 4579999997 899999999999998 7999988873 44445544432 34578999999999988
Q ss_pred HHc-------CccEEeecCCCC
Q 012947 85 LCS-------QTKLLLNCVGPY 99 (452)
Q Consensus 85 ~~~-------~~dvVIn~aGp~ 99 (452)
+++ +.|++|||||..
T Consensus 78 ~~~~~~~~~g~iD~lv~nAG~~ 99 (272)
T PRK08159 78 VFETLEKKWGKLDFVVHAIGFS 99 (272)
T ss_pred HHHHHHHhcCCCcEEEECCccc
Confidence 765 479999999964
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=2.1e-08 Score=97.29 Aligned_cols=83 Identities=17% Similarity=0.154 Sum_probs=67.8
Q ss_pred CCeEEEEcCCc-hHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHc
Q 012947 10 LFDVIILGASG-FTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 10 ~~~ilV~GATG-~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~-~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
...++|+||+| .+|+.+++.|+++| ++|++.+|+.+++++..+++... ...++.++.+|++|+++++++++
T Consensus 17 ~k~vlItG~sg~gIG~~ia~~l~~~G-------~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 89 (262)
T PRK07831 17 GKVVLVTAAAGTGIGSATARRALEEG-------ARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALID 89 (262)
T ss_pred CCEEEEECCCcccHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHH
Confidence 46799999997 79999999999998 78999999998887776655310 11357788999999999988775
Q ss_pred -------CccEEeecCCCC
Q 012947 88 -------QTKLLLNCVGPY 99 (452)
Q Consensus 88 -------~~dvVIn~aGp~ 99 (452)
++|+||||+|..
T Consensus 90 ~~~~~~g~id~li~~ag~~ 108 (262)
T PRK07831 90 AAVERLGRLDVLVNNAGLG 108 (262)
T ss_pred HHHHHcCCCCEEEECCCCC
Confidence 469999999953
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=2e-08 Score=95.29 Aligned_cols=77 Identities=14% Similarity=0.154 Sum_probs=66.3
Q ss_pred EEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC---cc
Q 012947 14 IILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ---TK 90 (452)
Q Consensus 14 lV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~---~d 90 (452)
+|+||+|++|+.++++|+++| ++|++.+|+.++++.+.+++.. ..++.++.+|++|++++.++++. +|
T Consensus 1 lItGas~~iG~~~a~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~id 71 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEG-------ARVTIASRSRDRLAAAARALGG--GAPVRTAALDITDEAAVDAFFAEAGPFD 71 (230)
T ss_pred CeecCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHhcCCCC
Confidence 589999999999999999998 7999999999888877766531 24677899999999999998874 69
Q ss_pred EEeecCCCC
Q 012947 91 LLLNCVGPY 99 (452)
Q Consensus 91 vVIn~aGp~ 99 (452)
+|||++|..
T Consensus 72 ~li~~ag~~ 80 (230)
T PRK07041 72 HVVITAADT 80 (230)
T ss_pred EEEECCCCC
Confidence 999999854
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=98.78 E-value=3e-08 Score=99.45 Aligned_cols=118 Identities=18% Similarity=0.067 Sum_probs=82.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..++|+|||++||+.+++.|+++|. ++|++++|+.++++++.+++.. ....+.++.+|++|.++++++++
T Consensus 4 k~vlITGas~GIG~aia~~L~~~G~------~~V~l~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~ 76 (314)
T TIGR01289 4 PTVIITGASSGLGLYAAKALAATGE------WHVIMACRDFLKAEQAAKSLGM-PKDSYTIMHLDLGSLDSVRQFVQQFR 76 (314)
T ss_pred CEEEEECCCChHHHHHHHHHHHcCC------CEEEEEeCCHHHHHHHHHHhcC-CCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 4799999999999999999999873 6899999999998888777642 12356788899999999887764
Q ss_pred ----CccEEeecCCCCCCCC-HHHHHHHHHhCCcEEEecCcHHHHHHHHHHHH
Q 012947 88 ----QTKLLLNCVGPYRLHG-DPVAAACVHSGCDYLDISGEPEFMERMEARYH 135 (452)
Q Consensus 88 ----~~dvVIn~aGp~~~~~-~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~ 135 (452)
+.|++|||||.+.... ........-..+.-+++.+....++.+.+.+.
T Consensus 77 ~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~ 129 (314)
T TIGR01289 77 ESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLK 129 (314)
T ss_pred HhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHH
Confidence 4799999999643211 00001111111223556666666666655443
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.78 E-value=2.7e-08 Score=96.17 Aligned_cols=80 Identities=13% Similarity=0.037 Sum_probs=61.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|+||+.++++|+++| ++|++.+|+.. ++..+++.. ...++..+.+|++|.++++++++
T Consensus 10 ~k~~lItG~~~gIG~a~a~~l~~~G-------~~vv~~~~~~~--~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~ 79 (253)
T PRK08993 10 GKVAVVTGCDTGLGQGMALGLAEAG-------CDIVGINIVEP--TETIEQVTA-LGRRFLSLTADLRKIDGIPALLERA 79 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CEEEEecCcch--HHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHH
Confidence 4579999999999999999999998 78888777542 122222211 12356788999999999988876
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
+.|+||||||..
T Consensus 80 ~~~~~~~D~li~~Ag~~ 96 (253)
T PRK08993 80 VAEFGHIDILVNNAGLI 96 (253)
T ss_pred HHHhCCCCEEEECCCCC
Confidence 479999999964
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=98.77 E-value=3.9e-08 Score=99.35 Aligned_cols=82 Identities=16% Similarity=0.133 Sum_probs=63.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhH-----HHHHHHHhCCCCCCCccEEEEeCCCHHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR-----VKQALQWASPSHSLSIPILTADTTDPPSLHR 84 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~k-----l~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~ 84 (452)
..+|+|+|||||+|+++++.|+++| ++|.+++|+.+. ++.+.+... ....++.++.+|+.|.+++.+
T Consensus 6 ~~~vlVTGatGfiG~~l~~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~ 77 (340)
T PLN02653 6 RKVALITGITGQDGSYLTEFLLSKG-------YEVHGIIRRSSNFNTQRLDHIYIDPH-PNKARMKLHYGDLSDASSLRR 77 (340)
T ss_pred CCEEEEECCCCccHHHHHHHHHHCC-------CEEEEEecccccccccchhhhccccc-cccCceEEEEecCCCHHHHHH
Confidence 4679999999999999999999998 799999886542 322221110 012357899999999999999
Q ss_pred HHcC--ccEEeecCCCC
Q 012947 85 LCSQ--TKLLLNCVGPY 99 (452)
Q Consensus 85 ~~~~--~dvVIn~aGp~ 99 (452)
++++ +|+|||||+..
T Consensus 78 ~~~~~~~d~Vih~A~~~ 94 (340)
T PLN02653 78 WLDDIKPDEVYNLAAQS 94 (340)
T ss_pred HHHHcCCCEEEECCccc
Confidence 9985 69999999864
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.77 E-value=9.8e-08 Score=91.69 Aligned_cols=78 Identities=14% Similarity=0.067 Sum_probs=64.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR-~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
..+++|+||+|++|+.+++.|+++| ++|++..| +.++++.+..++. .++.++.+|++|++++.+++++
T Consensus 5 ~k~ilItGas~gIG~~la~~l~~~G-------~~vv~~~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~ 73 (253)
T PRK08642 5 EQTVLVTGGSRGLGAAIARAFAREG-------ARVVVNYHQSEDAAEALADELG----DRAIALQADVTDREQVQAMFAT 73 (253)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHCC-------CeEEEEcCCCHHHHHHHHHHhC----CceEEEEcCCCCHHHHHHHHHH
Confidence 3579999999999999999999998 78877654 6667766666542 4677889999999999888763
Q ss_pred --------ccEEeecCCC
Q 012947 89 --------TKLLLNCVGP 98 (452)
Q Consensus 89 --------~dvVIn~aGp 98 (452)
+|+|||++|.
T Consensus 74 ~~~~~g~~id~li~~ag~ 91 (253)
T PRK08642 74 ATEHFGKPITTVVNNALA 91 (253)
T ss_pred HHHHhCCCCeEEEECCCc
Confidence 8999999985
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=98.77 E-value=3.3e-08 Score=93.70 Aligned_cols=74 Identities=23% Similarity=0.362 Sum_probs=61.3
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc--c
Q 012947 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT--K 90 (452)
Q Consensus 13 ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~--d 90 (452)
|+|+|||||+|++++++|++++ ..|+...|+.......... .++.++.+|+.|.+.++++++.. |
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g-------~~v~~~~~~~~~~~~~~~~------~~~~~~~~dl~~~~~~~~~~~~~~~d 67 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKG-------HEVIVLSRSSNSESFEEKK------LNVEFVIGDLTDKEQLEKLLEKANID 67 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT-------TEEEEEESCSTGGHHHHHH------TTEEEEESETTSHHHHHHHHHHHTES
T ss_pred EEEEccCCHHHHHHHHHHHHcC-------Ccccccccccccccccccc------ceEEEEEeeccccccccccccccCce
Confidence 7999999999999999999998 6777777766554332222 26789999999999999999976 9
Q ss_pred EEeecCCCC
Q 012947 91 LLLNCVGPY 99 (452)
Q Consensus 91 vVIn~aGp~ 99 (452)
+|||+++..
T Consensus 68 ~vi~~a~~~ 76 (236)
T PF01370_consen 68 VVIHLAAFS 76 (236)
T ss_dssp EEEEEBSSS
T ss_pred EEEEeeccc
Confidence 999999864
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=98.77 E-value=6.1e-08 Score=97.60 Aligned_cols=79 Identities=11% Similarity=0.196 Sum_probs=60.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHH---HHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQA---LQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l---~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
++|+|+|||||+|++++++|++++ ++|++.+|........ ..++. ..++.++.+|++|++++.++++
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g-------~~V~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~ 70 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNG-------HDVVILDNLCNSKRSVLPVIERLG---GKHPTFVEGDIRNEALLTEILH 70 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCC-------CeEEEEecCCCchHhHHHHHHHhc---CCCceEEEccCCCHHHHHHHHh
Confidence 479999999999999999999988 7888887643222211 12221 2356788999999999999887
Q ss_pred --CccEEeecCCCC
Q 012947 88 --QTKLLLNCVGPY 99 (452)
Q Consensus 88 --~~dvVIn~aGp~ 99 (452)
++|+|||+||..
T Consensus 71 ~~~~d~vvh~a~~~ 84 (338)
T PRK10675 71 DHAIDTVIHFAGLK 84 (338)
T ss_pred cCCCCEEEECCccc
Confidence 589999999853
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=4.3e-08 Score=93.33 Aligned_cols=77 Identities=16% Similarity=0.148 Sum_probs=62.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR-~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
...++|+||+|+||+.++++|+++| +++++..| +.++++++.+++ .+.++.+|++|.+++.+.++.
T Consensus 6 ~k~vlItGasggIG~~~a~~l~~~G-------~~v~~~~~~~~~~~~~l~~~~------~~~~~~~D~~~~~~~~~~~~~ 72 (237)
T PRK12742 6 GKKVLVLGGSRGIGAAIVRRFVTDG-------ANVRFTYAGSKDAAERLAQET------GATAVQTDSADRDAVIDVVRK 72 (237)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC-------CEEEEecCCCHHHHHHHHHHh------CCeEEecCCCCHHHHHHHHHH
Confidence 3579999999999999999999998 78887765 566776665544 346788999999988887763
Q ss_pred ---ccEEeecCCCC
Q 012947 89 ---TKLLLNCVGPY 99 (452)
Q Consensus 89 ---~dvVIn~aGp~ 99 (452)
.|+||||+|..
T Consensus 73 ~~~id~li~~ag~~ 86 (237)
T PRK12742 73 SGALDILVVNAGIA 86 (237)
T ss_pred hCCCcEEEECCCCC
Confidence 79999999864
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=2.3e-08 Score=109.88 Aligned_cols=82 Identities=20% Similarity=0.166 Sum_probs=70.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||||++|+.+++.|+++| ++|++++|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 371 ~k~vlItGas~giG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~~~~~~~~~ 442 (657)
T PRK07201 371 GKVVLITGASSGIGRATAIKVAEAG-------ATVFLVARNGEALDELVAEIRA-KGGTAHAYTCDLTDSAAVDHTVKDI 442 (657)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHH
Confidence 4579999999999999999999998 7999999999998888776632 13467888999999999998877
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
++|+||||||..
T Consensus 443 ~~~~g~id~li~~Ag~~ 459 (657)
T PRK07201 443 LAEHGHVDYLVNNAGRS 459 (657)
T ss_pred HHhcCCCCEEEECCCCC
Confidence 579999999954
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=98.76 E-value=2.5e-08 Score=110.05 Aligned_cols=84 Identities=15% Similarity=0.094 Sum_probs=69.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~-~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++|+||+|+||+.++++|+++| ++|++++|+.++++.+.+++... ....+..+.+|++|++++.++++
T Consensus 414 gkvvLVTGasggIG~aiA~~La~~G-------a~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~ 486 (676)
T TIGR02632 414 RRVAFVTGGAGGIGRETARRLAAEG-------AHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFAD 486 (676)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHhCC-------CEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHH
Confidence 3579999999999999999999998 89999999998887776665310 11346688999999999988877
Q ss_pred ------CccEEeecCCCCC
Q 012947 88 ------QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (452)
++|+||||||...
T Consensus 487 i~~~~g~iDilV~nAG~~~ 505 (676)
T TIGR02632 487 VALAYGGVDIVVNNAGIAT 505 (676)
T ss_pred HHHhcCCCcEEEECCCCCC
Confidence 5799999999643
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=98.76 E-value=7.2e-08 Score=93.75 Aligned_cols=116 Identities=8% Similarity=0.033 Sum_probs=75.0
Q ss_pred CeEEEEcCC--chHHHHHHHHHHHcCCCCCCCceEEEEEecChh--HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 012947 11 FDVIILGAS--GFTGKYVVREALKLFNFPSSPIKSLALAGRNPT--RVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 11 ~~ilV~GAT--G~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~--kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
..++|+||+ +.||+.++++|+++| ++|++..|+.+ +.++..+++.. ....+.++.+|++|++++++++
T Consensus 7 k~~lItGas~~~GIG~aia~~la~~G-------~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~ 78 (258)
T PRK07370 7 KKALVTGIANNRSIAWGIAQQLHAAG-------AELGITYLPDEKGRFEKKVRELTE-PLNPSLFLPCDVQDDAQIEETF 78 (258)
T ss_pred cEEEEeCCCCCCchHHHHHHHHHHCC-------CEEEEEecCcccchHHHHHHHHHh-ccCcceEeecCcCCHHHHHHHH
Confidence 579999986 799999999999998 78888865432 23333333321 1124567889999999998877
Q ss_pred c-------CccEEeecCCCCCCC--CHHHHHHHHHh--CCcEEEecCcHHHHHHHHHHH
Q 012947 87 S-------QTKLLLNCVGPYRLH--GDPVAAACVHS--GCDYLDISGEPEFMERMEARY 134 (452)
Q Consensus 87 ~-------~~dvVIn~aGp~~~~--~~~vv~ac~~~--g~~yvDlsge~~~~~~~~~~~ 134 (452)
+ +.|++|||+|..... ..++.+.-.+. ..--+++.+...+++.+.+.+
T Consensus 79 ~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m 137 (258)
T PRK07370 79 ETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLM 137 (258)
T ss_pred HHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHH
Confidence 5 479999999964310 11222222222 223456666666666665544
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=5.3e-08 Score=95.54 Aligned_cols=77 Identities=14% Similarity=0.087 Sum_probs=60.7
Q ss_pred CeEEEEcCCc--hHHHHHHHHHHHcCCCCCCCceEEEEEecChhHH---HHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 012947 11 FDVIILGASG--FTGKYVVREALKLFNFPSSPIKSLALAGRNPTRV---KQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 11 ~~ilV~GATG--~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl---~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
..++|+||++ +||+.+++.|+++| ++|++.+|+.+.. +++.+++ .....+.+|++|+++++++
T Consensus 8 k~~lVTGas~~~GIG~aiA~~la~~G-------a~V~~~~r~~~~~~~~~~~~~~~-----g~~~~~~~Dv~d~~~v~~~ 75 (271)
T PRK06505 8 KRGLIMGVANDHSIAWGIAKQLAAQG-------AELAFTYQGEALGKRVKPLAESL-----GSDFVLPCDVEDIASVDAV 75 (271)
T ss_pred CEEEEeCCCCCCcHHHHHHHHHHhCC-------CEEEEecCchHHHHHHHHHHHhc-----CCceEEeCCCCCHHHHHHH
Confidence 5799999997 99999999999998 8999999986433 2332322 1234678999999999887
Q ss_pred Hc-------CccEEeecCCCC
Q 012947 86 CS-------QTKLLLNCVGPY 99 (452)
Q Consensus 86 ~~-------~~dvVIn~aGp~ 99 (452)
++ +.|+||||||..
T Consensus 76 ~~~~~~~~g~iD~lVnnAG~~ 96 (271)
T PRK06505 76 FEALEKKWGKLDFVVHAIGFS 96 (271)
T ss_pred HHHHHHHhCCCCEEEECCccC
Confidence 75 479999999964
|
|
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.76 E-value=5.2e-08 Score=89.11 Aligned_cols=127 Identities=11% Similarity=0.047 Sum_probs=92.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
....+|+||+.+||++|++.|++.| +++++++++.+..++....+.. ..+...+.||++++.+++.+++
T Consensus 14 sk~~~vtGg~sGIGrAia~~la~~G-------arv~v~dl~~~~A~ata~~L~g--~~~h~aF~~DVS~a~~v~~~l~e~ 84 (256)
T KOG1200|consen 14 SKVAAVTGGSSGIGRAIAQLLAKKG-------ARVAVADLDSAAAEATAGDLGG--YGDHSAFSCDVSKAHDVQNTLEEM 84 (256)
T ss_pred cceeEEecCCchHHHHHHHHHHhcC-------cEEEEeecchhhHHHHHhhcCC--CCccceeeeccCcHHHHHHHHHHH
Confidence 4568999999999999999999999 8999999999998888888852 3466789999999988887665
Q ss_pred -----CccEEeecCCCCCCCCHHHHHHHHHhCC--cEEEecCcHHHHHHHHHHHHHHHHhCccEEEcC
Q 012947 88 -----QTKLLLNCVGPYRLHGDPVAAACVHSGC--DYLDISGEPEFMERMEARYHEKAVETGSLLVSA 148 (452)
Q Consensus 88 -----~~dvVIn~aGp~~~~~~~vv~ac~~~g~--~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~ 148 (452)
..++||||||.... ..+++.--+++. ..++++|.....+.....+- ..+..+..||+-
T Consensus 85 ~k~~g~psvlVncAGItrD--~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~-~~~~~~~sIiNv 149 (256)
T KOG1200|consen 85 EKSLGTPSVLVNCAGITRD--GLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMV-MNQQQGLSIINV 149 (256)
T ss_pred HHhcCCCcEEEEcCccccc--cceeeccHHHHHHHHHhhchhhHHHHHHHHHHHH-HhcCCCceEEee
Confidence 47999999997653 233333333333 35677777666665543332 234445455543
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=3.5e-08 Score=95.48 Aligned_cols=82 Identities=15% Similarity=0.154 Sum_probs=62.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec----ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR----NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR----~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
..+++|+||+|++|+.++++|+++| +++++..+ +.++++++.+++.. ...++.++.+|++|+++++++
T Consensus 8 ~k~vlItGa~~gIG~~~a~~l~~~G-------~~vv~i~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~ 79 (257)
T PRK12744 8 GKVVLIAGGAKNLGGLIARDLAAQG-------AKAVAIHYNSAASKADAEETVAAVKA-AGAKAVAFQADLTTAAAVEKL 79 (257)
T ss_pred CcEEEEECCCchHHHHHHHHHHHCC-------CcEEEEecCCccchHHHHHHHHHHHH-hCCcEEEEecCcCCHHHHHHH
Confidence 3589999999999999999999988 67666654 33445555554421 123677889999999999887
Q ss_pred Hc-------CccEEeecCCCC
Q 012947 86 CS-------QTKLLLNCVGPY 99 (452)
Q Consensus 86 ~~-------~~dvVIn~aGp~ 99 (452)
++ +.|+|||++|..
T Consensus 80 ~~~~~~~~~~id~li~~ag~~ 100 (257)
T PRK12744 80 FDDAKAAFGRPDIAINTVGKV 100 (257)
T ss_pred HHHHHHhhCCCCEEEECCccc
Confidence 76 579999999963
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=8.4e-08 Score=94.24 Aligned_cols=106 Identities=19% Similarity=0.234 Sum_probs=75.7
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc----
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~---- 87 (452)
.++|+|| |+||+++++.|+ +| .+|++++|+.++++++.+++.. ...++.++.+|++|++++.++++
T Consensus 4 ~~lItGa-~gIG~~la~~l~-~G-------~~Vv~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dv~d~~~i~~~~~~~~~ 73 (275)
T PRK06940 4 VVVVIGA-GGIGQAIARRVG-AG-------KKVLLADYNEENLEAAAKTLRE-AGFDVSTQEVDVSSRESVKALAATAQT 73 (275)
T ss_pred EEEEECC-ChHHHHHHHHHh-CC-------CEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEEeecCCHHHHHHHHHHHHh
Confidence 6899998 699999999996 67 7999999999888877776632 12357788999999999988875
Q ss_pred --CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHH
Q 012947 88 --QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARY 134 (452)
Q Consensus 88 --~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~ 134 (452)
..|+||||||..... .. .+... -+++.+....++.+.+.+
T Consensus 74 ~g~id~li~nAG~~~~~-~~-~~~~~-----~vN~~g~~~l~~~~~~~m 115 (275)
T PRK06940 74 LGPVTGLVHTAGVSPSQ-AS-PEAIL-----KVDLYGTALVLEEFGKVI 115 (275)
T ss_pred cCCCCEEEECCCcCCch-hh-HHHHH-----HHhhHHHHHHHHHHHHHH
Confidence 479999999964321 11 22222 244555555555554433
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=5.5e-08 Score=94.75 Aligned_cols=82 Identities=10% Similarity=0.068 Sum_probs=61.4
Q ss_pred CCeEEEEcC--CchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 10 LFDVIILGA--SGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 10 ~~~ilV~GA--TG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
...++|+|| +++||+.+++.|+++| ++|++.+|+. +.++..+++.. .......+.+|++|+++++++++
T Consensus 6 ~k~~lITGa~~~~GIG~a~a~~l~~~G-------~~v~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~ 76 (261)
T PRK08690 6 GKKILITGMISERSIAYGIAKACREQG-------AELAFTYVVD-KLEERVRKMAA-ELDSELVFRCDVASDDEINQVFA 76 (261)
T ss_pred CcEEEEECCCCCCcHHHHHHHHHHHCC-------CEEEEEcCcH-HHHHHHHHHHh-ccCCceEEECCCCCHHHHHHHHH
Confidence 357999997 6799999999999998 7999888763 33333333321 11234578999999999988875
Q ss_pred -------CccEEeecCCCCC
Q 012947 88 -------QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -------~~dvVIn~aGp~~ 100 (452)
+.|++|||||...
T Consensus 77 ~~~~~~g~iD~lVnnAG~~~ 96 (261)
T PRK08690 77 DLGKHWDGLDGLVHSIGFAP 96 (261)
T ss_pred HHHHHhCCCcEEEECCccCC
Confidence 5799999999753
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=3.5e-08 Score=94.56 Aligned_cols=77 Identities=17% Similarity=0.126 Sum_probs=61.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
++++|+||||++|+.++++|+++| ++|++++|+.++. +.+.. ..++.++.+|++|.++++++++
T Consensus 2 ~~vlItGasggiG~~ia~~l~~~G-------~~v~~~~r~~~~~--~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~ 68 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLLQPG-------IAVLGVARSRHPS--LAAAA----GERLAEVELDLSDAAAAAAWLAGDL 68 (243)
T ss_pred ceEEEecCCcchHHHHHHHHHhCC-------CEEEEEecCcchh--hhhcc----CCeEEEEEeccCCHHHHHHHHHHHH
Confidence 479999999999999999999998 7999999987642 22211 2467889999999999988543
Q ss_pred --------CccEEeecCCCCC
Q 012947 88 --------QTKLLLNCVGPYR 100 (452)
Q Consensus 88 --------~~dvVIn~aGp~~ 100 (452)
..|++|||+|...
T Consensus 69 ~~~~~~~~~~~~~v~~ag~~~ 89 (243)
T PRK07023 69 LAAFVDGASRVLLINNAGTVE 89 (243)
T ss_pred HHHhccCCCceEEEEcCcccC
Confidence 3689999998643
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=8.5e-08 Score=87.71 Aligned_cols=112 Identities=11% Similarity=0.057 Sum_probs=79.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||++++|+.+++.|++.| .+|++.+|+.+.+++..+++.. ...+..++.+|++|.+++.++++
T Consensus 16 gk~~lVTGa~~GIG~aia~~l~~~G-------~~V~l~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~v~~~v~~~ 87 (169)
T PRK06720 16 GKVAIVTGGGIGIGRNTALLLAKQG-------AKVIVTDIDQESGQATVEEITN-LGGEALFVSYDMEKQGDWQRVISIT 87 (169)
T ss_pred CCEEEEecCCChHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHH
Confidence 4679999999999999999999988 7999999998887776666531 12356678999999999887664
Q ss_pred -----CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHH
Q 012947 88 -----QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERME 131 (452)
Q Consensus 88 -----~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~ 131 (452)
+.|++|||||.+... .+..+...+. -+.+|+.+.....+...
T Consensus 88 ~~~~G~iDilVnnAG~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 134 (169)
T PRK06720 88 LNAFSRIDMLFQNAGLYKID-SIFSRQQEND-SNVLCINDVWIEIKQLT 134 (169)
T ss_pred HHHcCCCCEEEECCCcCCCC-CcccccchhH-hhceeccHHHHHHHHHH
Confidence 589999999965432 1222211111 23667776644444443
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=3.7e-08 Score=93.80 Aligned_cols=81 Identities=15% Similarity=0.188 Sum_probs=62.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh-hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~-~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
.+++|+||||++|+.++++|+++| +++++..|+. +..+.+.+.+.. ...++.++.+|++|++++.++++
T Consensus 7 ~~vlItGasg~iG~~l~~~l~~~g-------~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~ 78 (249)
T PRK12825 7 RVALVTGAARGLGRAIALRLARAG-------ADVVVHYRSDEEAAEELVEAVEA-LGRRAQAVQADVTDKAALEAAVAAA 78 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-------CeEEEEeCCCHHHHHHHHHHHHh-cCCceEEEECCcCCHHHHHHHHHHH
Confidence 589999999999999999999998 6777766654 344444443321 13467889999999999988775
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
++|+|||++|..
T Consensus 79 ~~~~~~id~vi~~ag~~ 95 (249)
T PRK12825 79 VERFGRIDILVNNAGIF 95 (249)
T ss_pred HHHcCCCCEEEECCccC
Confidence 469999999943
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.1e-07 Score=100.09 Aligned_cols=79 Identities=15% Similarity=0.153 Sum_probs=60.3
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh--------------------HHHHHHHHhCCCCCCC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT--------------------RVKQALQWASPSHSLS 68 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~--------------------kl~~l~~~l~~~~~~~ 68 (452)
+.++|+|||||||||++++++|+++| ++|++++|... +++.+.+ . ...+
T Consensus 46 ~~k~VLVTGatGfIGs~Lv~~L~~~G-------~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~---~~~~ 114 (442)
T PLN02572 46 KKKKVMVIGGDGYCGWATALHLSKRG-------YEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKE-V---SGKE 114 (442)
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHCC-------CeEEEEeccccccccccccccccccccchHHHHHHHHH-h---hCCc
Confidence 35689999999999999999999998 78988764211 1111111 1 1235
Q ss_pred ccEEEEeCCCHHHHHHHHc--CccEEeecCCC
Q 012947 69 IPILTADTTDPPSLHRLCS--QTKLLLNCVGP 98 (452)
Q Consensus 69 v~~v~~Dl~d~~sl~~~~~--~~dvVIn~aGp 98 (452)
+.++.+|+.|.+.+.++++ ++|+|||+|+.
T Consensus 115 v~~v~~Dl~d~~~v~~~l~~~~~D~ViHlAa~ 146 (442)
T PLN02572 115 IELYVGDICDFEFLSEAFKSFEPDAVVHFGEQ 146 (442)
T ss_pred ceEEECCCCCHHHHHHHHHhCCCCEEEECCCc
Confidence 7899999999999999998 48999999964
|
|
| >KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.74 E-value=5.1e-08 Score=97.46 Aligned_cols=154 Identities=19% Similarity=0.276 Sum_probs=124.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHH-HHHHHHcCc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPP-SLHRLCSQT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~-sl~~~~~~~ 89 (452)
..|+++|+ ||+.+-++++|.++.+ .+|+++.|...+.+++.+. .+++.+..|+.|++ .|++.+++.
T Consensus 3 ~~vlllgs-g~v~~p~~d~ls~~~d------v~vtva~~~~~~~~~~~~~------~~~~av~ldv~~~~~~L~~~v~~~ 69 (445)
T KOG0172|consen 3 KGVLLLGS-GFVSRPVADFLSRKKD------VNVTVASRTLKDAEALVKG------INIKAVSLDVADEELALRKEVKPL 69 (445)
T ss_pred cceEEecC-ccccchHHHHHhhcCC------ceEEEehhhHHHHHHHhcC------CCccceEEEccchHHHHHhhhccc
Confidence 46899986 9999999999999874 8999999999999888763 35899999999998 999999999
Q ss_pred cEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhhcCC
Q 012947 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWIP 169 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~~~~ 169 (452)
|+|+... ||..+ ..+++.|+.+..|.+.-+...+-+ .++++.++..|+++.+-.|+|..-..|.+.-......+
T Consensus 70 D~viSLl-P~t~h-~lVaK~~i~~~~~~vtsSyv~pe~----~~L~~~~v~AG~ti~~e~gldpGidhm~a~~ti~~vh~ 143 (445)
T KOG0172|consen 70 DLVISLL-PYTFH-PLVAKGCIITKEDSVTSSYVDPEL----EELEKAAVPAGSTIMNEIGLDPGIDHMPAMKTIDLVHE 143 (445)
T ss_pred ceeeeec-cchhh-HHHHHHHHHhhcccccccccCHHH----HhhhhhccCCCceEecccccCcchhhhhhhccchHHHh
Confidence 9999987 66655 578999999999988776555544 44588899999999999999988888777755555543
Q ss_pred CCCcceEEEEEEeccC
Q 012947 170 PAVPNQIEAYVSLESD 185 (452)
Q Consensus 170 ~~~~~~~~~~~~~~~~ 185 (452)
....+++|.+.-|+
T Consensus 144 --hgg~i~sf~sycGg 157 (445)
T KOG0172|consen 144 --HGGKIKSFKSYCGG 157 (445)
T ss_pred --hcceeeehhhhcCC
Confidence 34567888764333
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=4.4e-08 Score=97.97 Aligned_cols=81 Identities=15% Similarity=0.169 Sum_probs=64.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh----------hHHHHHHHHhCCCCCCCccEEEEeCCCH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP----------TRVKQALQWASPSHSLSIPILTADTTDP 79 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~----------~kl~~l~~~l~~~~~~~v~~v~~Dl~d~ 79 (452)
...++|+||+++||+.+++.|++.| ++|++++|+. ++++++.+++.. ...++.++.+|++|+
T Consensus 8 ~k~~lITGgs~GIG~aia~~la~~G-------~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~Dv~~~ 79 (305)
T PRK08303 8 GKVALVAGATRGAGRGIAVELGAAG-------ATVYVTGRSTRARRSEYDRPETIEETAELVTA-AGGRGIAVQVDHLVP 79 (305)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEecccccccccccccchHHHHHHHHHh-cCCceEEEEcCCCCH
Confidence 4689999999999999999999998 8999999983 455555555431 123567889999999
Q ss_pred HHHHHHHc-------CccEEeecC-CC
Q 012947 80 PSLHRLCS-------QTKLLLNCV-GP 98 (452)
Q Consensus 80 ~sl~~~~~-------~~dvVIn~a-Gp 98 (452)
++++++++ +.|++|||+ |.
T Consensus 80 ~~v~~~~~~~~~~~g~iDilVnnA~g~ 106 (305)
T PRK08303 80 EQVRALVERIDREQGRLDILVNDIWGG 106 (305)
T ss_pred HHHHHHHHHHHHHcCCccEEEECCccc
Confidence 99988775 479999999 73
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=98.74 E-value=2.6e-08 Score=95.06 Aligned_cols=80 Identities=14% Similarity=0.078 Sum_probs=63.7
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC-hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc----
Q 012947 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (452)
Q Consensus 13 ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~-~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~---- 87 (452)
++|+||+|++|+.++++|+++| +++++++|+ .++++++.+++.. ...++.++.+|++|++++.++++
T Consensus 1 vlItGas~giG~~~a~~l~~~G-------~~v~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 72 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADG-------FEICVHYHSGRSDAESVVSAIQA-QGGNARLLQFDVADRVACRTLLEADIA 72 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCCCHHHHHHHHHHHHH-cCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 5899999999999999999998 788888764 5566666655531 13467889999999999988776
Q ss_pred ---CccEEeecCCCCC
Q 012947 88 ---QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ---~~dvVIn~aGp~~ 100 (452)
..|++||++|...
T Consensus 73 ~~~~i~~li~~ag~~~ 88 (239)
T TIGR01831 73 EHGAYYGVVLNAGITR 88 (239)
T ss_pred HcCCCCEEEECCCCCC
Confidence 3699999998643
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=3.1e-08 Score=94.74 Aligned_cols=80 Identities=15% Similarity=0.117 Sum_probs=64.7
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEE-EecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC--
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLAL-AGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~i-agR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~-- 88 (452)
.++|+||+|++|+.+++.|+++| ++|++ ..|+.++.++...++.. ...++.++.+|++|++++++++++
T Consensus 3 ~~lItGa~g~iG~~l~~~l~~~g-------~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~i~~~~~~~~ 74 (247)
T PRK09730 3 IALVTGGSRGIGRATALLLAQEG-------YTVAVNYQQNLHAAQEVVNLITQ-AGGKAFVLQADISDENQVVAMFTAID 74 (247)
T ss_pred EEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCCChHHHHHHHHHHHh-CCCeEEEEEccCCCHHHHHHHHHHHH
Confidence 69999999999999999999988 78776 46888877766655531 123577899999999999888774
Q ss_pred -----ccEEeecCCCC
Q 012947 89 -----TKLLLNCVGPY 99 (452)
Q Consensus 89 -----~dvVIn~aGp~ 99 (452)
.|+|||++|..
T Consensus 75 ~~~~~id~vi~~ag~~ 90 (247)
T PRK09730 75 QHDEPLAALVNNAGIL 90 (247)
T ss_pred HhCCCCCEEEECCCCC
Confidence 58999999964
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.74 E-value=6e-08 Score=107.33 Aligned_cols=81 Identities=15% Similarity=0.089 Sum_probs=69.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..++|+||+|+||+.+++.|+++| .+|++++|+.++++.+.+++.. ..++.++.+|++|++++.++++
T Consensus 423 k~vLVTGasggIG~~la~~L~~~G-------a~Vvl~~r~~~~~~~~~~~l~~--~~~v~~v~~Dvtd~~~v~~~~~~~~ 493 (681)
T PRK08324 423 KVALVTGAAGGIGKATAKRLAAEG-------ACVVLADLDEEAAEAAAAELGG--PDRALGVACDVTDEAAVQAAFEEAA 493 (681)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCc-------CEEEEEeCCHHHHHHHHHHHhc--cCcEEEEEecCCCHHHHHHHHHHHH
Confidence 579999999999999999999998 7999999999998888777642 1467889999999999988776
Q ss_pred ----CccEEeecCCCCC
Q 012947 88 ----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (452)
++|+||||+|...
T Consensus 494 ~~~g~iDvvI~~AG~~~ 510 (681)
T PRK08324 494 LAFGGVDIVVSNAGIAI 510 (681)
T ss_pred HHcCCCCEEEECCCCCC
Confidence 5799999999643
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.73 E-value=4e-08 Score=94.21 Aligned_cols=81 Identities=23% Similarity=0.169 Sum_probs=64.0
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEe-cChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAG-RNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iag-R~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
.++|+||+|++|+.++++|+++| +++++.. |++++++++.+++.. ...++.++.+|++|.+++.++++
T Consensus 4 ~~lVtG~~~~iG~~~a~~l~~~G-------~~vv~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~ 75 (248)
T PRK06123 4 VMIITGASRGIGAATALLAAERG-------YAVCLNYLRNRDAAEAVVQAIRR-QGGEALAVAADVADEADVLRLFEAVD 75 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCC-------CeEEEecCCCHHHHHHHHHHHHh-CCCcEEEEEeccCCHHHHHHHHHHHH
Confidence 69999999999999999999998 6777776 556666666555521 12356788999999999988876
Q ss_pred ----CccEEeecCCCCC
Q 012947 88 ----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (452)
+.|+||||+|...
T Consensus 76 ~~~~~id~li~~ag~~~ 92 (248)
T PRK06123 76 RELGRLDALVNNAGILE 92 (248)
T ss_pred HHhCCCCEEEECCCCCC
Confidence 5799999999653
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=98.73 E-value=5e-08 Score=102.35 Aligned_cols=76 Identities=14% Similarity=0.253 Sum_probs=54.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
++++|+|||||||||++++++|+++| ++|++.+|...........+. ...+++++..|+.+. .+.+
T Consensus 119 ~~mkILVTGatGFIGs~Lv~~Ll~~G-------~~V~~ldr~~~~~~~~~~~~~--~~~~~~~~~~Di~~~-----~~~~ 184 (436)
T PLN02166 119 KRLRIVVTGGAGFVGSHLVDKLIGRG-------DEVIVIDNFFTGRKENLVHLF--GNPRFELIRHDVVEP-----ILLE 184 (436)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCC-------CEEEEEeCCCCccHhHhhhhc--cCCceEEEECccccc-----cccC
Confidence 45899999999999999999999998 799998885322111111111 123567788888654 3568
Q ss_pred ccEEeecCCC
Q 012947 89 TKLLLNCVGP 98 (452)
Q Consensus 89 ~dvVIn~aGp 98 (452)
+|+|||+|+.
T Consensus 185 ~D~ViHlAa~ 194 (436)
T PLN02166 185 VDQIYHLACP 194 (436)
T ss_pred CCEEEECcee
Confidence 9999999985
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=98.73 E-value=3.9e-08 Score=93.75 Aligned_cols=80 Identities=18% Similarity=0.148 Sum_probs=64.4
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR-~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
.++|+||+|++|+.++++|+++| +++++..| +.++++++.+++.. ...++.++.+|++|++++.++++
T Consensus 2 ~~lItG~sg~iG~~la~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~ 73 (242)
T TIGR01829 2 IALVTGGMGGIGTAICQRLAKDG-------YRVAANCGPNEERAEAWLQEQGA-LGFDFRVVEGDVSSFESCKAAVAKVE 73 (242)
T ss_pred EEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCCHHHHHHHHHHHHh-hCCceEEEEecCCCHHHHHHHHHHHH
Confidence 58999999999999999999998 78888888 66666665554421 12467899999999999887765
Q ss_pred ----CccEEeecCCCC
Q 012947 88 ----QTKLLLNCVGPY 99 (452)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (452)
.+|+||||+|..
T Consensus 74 ~~~~~id~vi~~ag~~ 89 (242)
T TIGR01829 74 AELGPIDVLVNNAGIT 89 (242)
T ss_pred HHcCCCcEEEECCCCC
Confidence 479999999854
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=98.73 E-value=1e-07 Score=96.53 Aligned_cols=82 Identities=12% Similarity=0.189 Sum_probs=62.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhH----HHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR----VKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~k----l~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
..+|+|+|||||+|++++++|++++ ++|++.+|.... .+.+.+... ....++.++.+|++|++++.++
T Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g-------~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~l~~~ 76 (352)
T PLN02240 5 GRTILVTGGAGYIGSHTVLQLLLAG-------YKVVVIDNLDNSSEEALRRVKELAG-DLGDNLVFHKVDLRDKEALEKV 76 (352)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCCcchHHHHHHHHHhhc-ccCccceEEecCcCCHHHHHHH
Confidence 3579999999999999999999988 789888875322 222222111 0123578899999999999998
Q ss_pred Hc--CccEEeecCCCC
Q 012947 86 CS--QTKLLLNCVGPY 99 (452)
Q Consensus 86 ~~--~~dvVIn~aGp~ 99 (452)
++ ++|+|||||+..
T Consensus 77 ~~~~~~d~vih~a~~~ 92 (352)
T PLN02240 77 FASTRFDAVIHFAGLK 92 (352)
T ss_pred HHhCCCCEEEEccccC
Confidence 87 689999999853
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.73 E-value=8.5e-08 Score=93.46 Aligned_cols=75 Identities=20% Similarity=0.286 Sum_probs=61.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--C
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--Q 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--~ 88 (452)
++|+|+||.||||++++.+|++.| ++|++.+.-...-.+.+.. ..++++++|+.|.+.|+++++ +
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G-------~~vvV~DNL~~g~~~~v~~------~~~~f~~gDi~D~~~L~~vf~~~~ 67 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTG-------HEVVVLDNLSNGHKIALLK------LQFKFYEGDLLDRALLTAVFEENK 67 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCC-------CeEEEEecCCCCCHHHhhh------ccCceEEeccccHHHHHHHHHhcC
Confidence 479999999999999999999998 8999999744333333322 126899999999999999998 6
Q ss_pred ccEEeecCCC
Q 012947 89 TKLLLNCVGP 98 (452)
Q Consensus 89 ~dvVIn~aGp 98 (452)
+|.|||+||-
T Consensus 68 idaViHFAa~ 77 (329)
T COG1087 68 IDAVVHFAAS 77 (329)
T ss_pred CCEEEECccc
Confidence 8999999984
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.72 E-value=6.7e-08 Score=94.01 Aligned_cols=80 Identities=10% Similarity=0.060 Sum_probs=65.1
Q ss_pred CCeEEEEcCC--chHHHHHHHHHHHcCCCCCCCceEEEEEecC---hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH
Q 012947 10 LFDVIILGAS--GFTGKYVVREALKLFNFPSSPIKSLALAGRN---PTRVKQALQWASPSHSLSIPILTADTTDPPSLHR 84 (452)
Q Consensus 10 ~~~ilV~GAT--G~iG~~va~~L~~~g~~~~~~~~~v~iagR~---~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~ 84 (452)
...++|+||+ +.||+.+++.|+++| ++|++++|+ .++++++.+++. ..++.++.+|++|++++++
T Consensus 7 ~k~~lItGa~~s~GIG~aia~~la~~G-------~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~ 76 (257)
T PRK08594 7 GKTYVVMGVANKRSIAWGIARSLHNAG-------AKLVFTYAGERLEKEVRELADTLE---GQESLLLPCDVTSDEEITA 76 (257)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHCC-------CEEEEecCcccchHHHHHHHHHcC---CCceEEEecCCCCHHHHHH
Confidence 3579999997 899999999999998 799998775 456666666652 2457788999999999988
Q ss_pred HHc-------CccEEeecCCCC
Q 012947 85 LCS-------QTKLLLNCVGPY 99 (452)
Q Consensus 85 ~~~-------~~dvVIn~aGp~ 99 (452)
+++ +.|++|||+|..
T Consensus 77 ~~~~~~~~~g~ld~lv~nag~~ 98 (257)
T PRK08594 77 CFETIKEEVGVIHGVAHCIAFA 98 (257)
T ss_pred HHHHHHHhCCCccEEEECcccC
Confidence 775 479999999854
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.72 E-value=4.7e-08 Score=97.33 Aligned_cols=63 Identities=16% Similarity=0.274 Sum_probs=51.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--C
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--Q 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--~ 88 (452)
++|+||||+||+|++++++|++.+ +|.+.+|... .+.+|+.|.+.+.++++ +
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g--------~V~~~~~~~~------------------~~~~Dl~d~~~~~~~~~~~~ 54 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG--------NLIALDVHST------------------DYCGDFSNPEGVAETVRKIR 54 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC--------CEEEeccccc------------------cccCCCCCHHHHHHHHHhcC
Confidence 479999999999999999999876 3666676421 23479999999999988 5
Q ss_pred ccEEeecCCCC
Q 012947 89 TKLLLNCVGPY 99 (452)
Q Consensus 89 ~dvVIn~aGp~ 99 (452)
+|+|||||+..
T Consensus 55 ~D~Vih~Aa~~ 65 (299)
T PRK09987 55 PDVIVNAAAHT 65 (299)
T ss_pred CCEEEECCccC
Confidence 89999999864
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=98.71 E-value=7.5e-08 Score=95.33 Aligned_cols=81 Identities=15% Similarity=0.238 Sum_probs=60.6
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC-
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~--~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~- 88 (452)
+|+|+||||++|++++++|+++++ ..+|++.+|.. .+.+. .+.+. ...++.++.+|++|++++.+++++
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~-----~~~v~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~ 72 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHP-----DAEVIVLDKLTYAGNLEN-LADLE--DNPRYRFVKGDIGDRELVSRLFTEH 72 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCC-----CCEEEEecCCCcchhhhh-hhhhc--cCCCcEEEEcCCcCHHHHHHHHhhc
Confidence 489999999999999999998862 15787777632 12111 12221 123678899999999999999987
Q ss_pred -ccEEeecCCCCC
Q 012947 89 -TKLLLNCVGPYR 100 (452)
Q Consensus 89 -~dvVIn~aGp~~ 100 (452)
+|+|||+++...
T Consensus 73 ~~d~vi~~a~~~~ 85 (317)
T TIGR01181 73 QPDAVVHFAAESH 85 (317)
T ss_pred CCCEEEEcccccC
Confidence 899999998653
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=6.2e-08 Score=94.10 Aligned_cols=79 Identities=16% Similarity=0.153 Sum_probs=65.0
Q ss_pred CCeEEEEcC--CchHHHHHHHHHHHcCCCCCCCceEEEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 012947 10 LFDVIILGA--SGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 10 ~~~ilV~GA--TG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~--~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
...++|+|| ++.||+.+++.|+++| ++|++.+|+. +.++++.+++. .++.++.+|++|+++++++
T Consensus 7 ~k~~lItGa~~s~GIG~a~a~~la~~G-------~~v~l~~r~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~i~~~ 75 (256)
T PRK07889 7 GKRILVTGVITDSSIAFHVARVAQEQG-------AEVVLTGFGRALRLTERIAKRLP----EPAPVLELDVTNEEHLASL 75 (256)
T ss_pred CCEEEEeCCCCcchHHHHHHHHHHHCC-------CEEEEecCccchhHHHHHHHhcC----CCCcEEeCCCCCHHHHHHH
Confidence 357999999 8999999999999998 7999999864 44566666553 3567899999999999887
Q ss_pred Hc-------CccEEeecCCCC
Q 012947 86 CS-------QTKLLLNCVGPY 99 (452)
Q Consensus 86 ~~-------~~dvVIn~aGp~ 99 (452)
++ +.|++|||||..
T Consensus 76 ~~~~~~~~g~iD~li~nAG~~ 96 (256)
T PRK07889 76 ADRVREHVDGLDGVVHSIGFA 96 (256)
T ss_pred HHHHHHHcCCCcEEEEccccc
Confidence 65 479999999964
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=1.1e-07 Score=94.53 Aligned_cols=81 Identities=10% Similarity=0.055 Sum_probs=62.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~--~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
..++|+||+|+||+++++.|+++| ++|++.+|+. ++++++.+.+.. ...++.++.+|++|++++.++++
T Consensus 50 k~vlITGas~gIG~aia~~L~~~G-------~~Vi~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~ 121 (294)
T PRK07985 50 RKALVTGGDSGIGRAAAIAYAREG-------ADVAISYLPVEEEDAQDVKKIIEE-CGRKAVLLPGDLSDEKFARSLVHE 121 (294)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCC-------CEEEEecCCcchhhHHHHHHHHHH-cCCeEEEEEccCCCHHHHHHHHHH
Confidence 579999999999999999999998 7898888753 344444433321 12456788999999998887765
Q ss_pred ------CccEEeecCCCC
Q 012947 88 ------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (452)
++|++||++|..
T Consensus 122 ~~~~~g~id~lv~~Ag~~ 139 (294)
T PRK07985 122 AHKALGGLDIMALVAGKQ 139 (294)
T ss_pred HHHHhCCCCEEEECCCCC
Confidence 469999999853
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=5.5e-08 Score=93.69 Aligned_cols=74 Identities=26% Similarity=0.209 Sum_probs=61.7
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc----
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~---- 87 (452)
+++|+||+|++|+.++++|+++| ++|++++|+.++++.+.+ .++..+.+|++|.+++.++++
T Consensus 4 ~vlVtGasg~IG~~la~~l~~~g-------~~v~~~~r~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~~~~i~~ 69 (256)
T PRK08017 4 SVLITGCSSGIGLEAALELKRRG-------YRVLAACRKPDDVARMNS-------LGFTGILLDLDDPESVERAADEVIA 69 (256)
T ss_pred EEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHhHHHHh-------CCCeEEEeecCCHHHHHHHHHHHHH
Confidence 69999999999999999999988 799999999988866532 246788999999988776554
Q ss_pred ----CccEEeecCCCC
Q 012947 88 ----QTKLLLNCVGPY 99 (452)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (452)
..|.+||++|..
T Consensus 70 ~~~~~~~~ii~~ag~~ 85 (256)
T PRK08017 70 LTDNRLYGLFNNAGFG 85 (256)
T ss_pred hcCCCCeEEEECCCCC
Confidence 358999999853
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=1.2e-07 Score=92.12 Aligned_cols=73 Identities=16% Similarity=0.114 Sum_probs=62.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|++|+.++++|+++| ++|++.+|+.++++ ..++..+.+|++|+++++++++
T Consensus 9 ~k~vlItG~s~gIG~~la~~l~~~G-------~~v~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~~ 71 (266)
T PRK06171 9 GKIIIVTGGSSGIGLAIVKELLANG-------ANVVNADIHGGDGQ----------HENYQFVPTDVSSAEEVNHTVAEI 71 (266)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCC-------CEEEEEeCCccccc----------cCceEEEEccCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 89999999876542 2356788999999999988776
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
+.|+||||+|..
T Consensus 72 ~~~~g~id~li~~Ag~~ 88 (266)
T PRK06171 72 IEKFGRIDGLVNNAGIN 88 (266)
T ss_pred HHHcCCCCEEEECCccc
Confidence 469999999954
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=8.3e-08 Score=105.07 Aligned_cols=95 Identities=17% Similarity=0.252 Sum_probs=76.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
|+|+|||||||+|++++++|++++ ++|.+.+|+.... ...+++++.+|+.|+. +.+++.++|
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G-------~~Vi~ldr~~~~~----------~~~~ve~v~~Dl~d~~-l~~al~~~D 62 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAG-------HTVSGIAQHPHDA----------LDPRVDYVCASLRNPV-LQELAGEAD 62 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC-------CEEEEEeCChhhc----------ccCCceEEEccCCCHH-HHHHhcCCC
Confidence 479999999999999999999988 7999999875431 1236789999999984 888889999
Q ss_pred EEeecCCCCCCC--------CHHHHHHHHHhCCcEEEecCc
Q 012947 91 LLLNCVGPYRLH--------GDPVAAACVHSGCDYLDISGE 123 (452)
Q Consensus 91 vVIn~aGp~~~~--------~~~vv~ac~~~g~~yvDlsge 123 (452)
+|||++++.... ..+++++|.+.++..|.+|+.
T Consensus 63 ~VIHLAa~~~~~~~~vNv~Gt~nLleAA~~~GvRiV~~SS~ 103 (699)
T PRK12320 63 AVIHLAPVDTSAPGGVGITGLAHVANAAARAGARLLFVSQA 103 (699)
T ss_pred EEEEcCccCccchhhHHHHHHHHHHHHHHHcCCeEEEEECC
Confidence 999999853211 256899999999988877743
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.1e-07 Score=92.74 Aligned_cols=78 Identities=13% Similarity=0.072 Sum_probs=61.2
Q ss_pred CCeEEEEcC--CchHHHHHHHHHHHcCCCCCCCceEEEEEecC---hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH
Q 012947 10 LFDVIILGA--SGFTGKYVVREALKLFNFPSSPIKSLALAGRN---PTRVKQALQWASPSHSLSIPILTADTTDPPSLHR 84 (452)
Q Consensus 10 ~~~ilV~GA--TG~iG~~va~~L~~~g~~~~~~~~~v~iagR~---~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~ 84 (452)
...++|+|| ++.||+.+++.|+++| ++|++.+|. .++++++.++++ ....+.+|++|++++++
T Consensus 6 ~k~vlItGas~~~GIG~a~a~~l~~~G-------~~v~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~Dv~d~~~v~~ 73 (260)
T PRK06997 6 GKRILITGLLSNRSIAYGIAKACKREG-------AELAFTYVGDRFKDRITEFAAEFG-----SDLVFPCDVASDEQIDA 73 (260)
T ss_pred CcEEEEeCCCCCCcHHHHHHHHHHHCC-------CeEEEEccchHHHHHHHHHHHhcC-----CcceeeccCCCHHHHHH
Confidence 357999996 6799999999999998 789887653 455555555432 23468899999999988
Q ss_pred HHc-------CccEEeecCCCC
Q 012947 85 LCS-------QTKLLLNCVGPY 99 (452)
Q Consensus 85 ~~~-------~~dvVIn~aGp~ 99 (452)
+++ +.|++|||||..
T Consensus 74 ~~~~~~~~~g~iD~lvnnAG~~ 95 (260)
T PRK06997 74 LFASLGQHWDGLDGLVHSIGFA 95 (260)
T ss_pred HHHHHHHHhCCCcEEEEccccC
Confidence 875 479999999964
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=98.69 E-value=8.5e-08 Score=100.78 Aligned_cols=76 Identities=16% Similarity=0.270 Sum_probs=55.3
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHH-HHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRV-KQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl-~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
+.++|+|+|||||+|++++++|++++ ++|++++|..... +.+...+. ..+++++.+|+.++ .+.
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G-------~~V~~ld~~~~~~~~~~~~~~~---~~~~~~i~~D~~~~-----~l~ 182 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARG-------DSVIVVDNFFTGRKENVMHHFS---NPNFELIRHDVVEP-----ILL 182 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCc-------CEEEEEeCCCccchhhhhhhcc---CCceEEEECCccCh-----hhc
Confidence 45789999999999999999999998 7888888753221 12212121 24567888888664 346
Q ss_pred CccEEeecCCCC
Q 012947 88 QTKLLLNCVGPY 99 (452)
Q Consensus 88 ~~dvVIn~aGp~ 99 (452)
++|+|||+|+..
T Consensus 183 ~~D~ViHlAa~~ 194 (442)
T PLN02206 183 EVDQIYHLACPA 194 (442)
T ss_pred CCCEEEEeeeec
Confidence 799999999853
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.69 E-value=6.6e-08 Score=92.29 Aligned_cols=80 Identities=16% Similarity=0.067 Sum_probs=63.0
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh-HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~-kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
+++|+||+|++|+.+++.|+++| .+|++++|+.. ..+++...+.. ...++.++.+|+.|++++.++++
T Consensus 4 ~vlItG~s~~iG~~la~~l~~~g-------~~vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~ 75 (245)
T PRK12824 4 IALVTGAKRGIGSAIARELLNDG-------YRVIATYFSGNDCAKDWFEEYGF-TEDQVRLKELDVTDTEECAEALAEIE 75 (245)
T ss_pred EEEEeCCCchHHHHHHHHHHHcC-------CEEEEEeCCcHHHHHHHHHHhhc-cCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 79999999999999999999988 79999999853 33333333321 13457889999999999888776
Q ss_pred ----CccEEeecCCCC
Q 012947 88 ----QTKLLLNCVGPY 99 (452)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (452)
+.|+|||++|..
T Consensus 76 ~~~~~id~vi~~ag~~ 91 (245)
T PRK12824 76 EEEGPVDILVNNAGIT 91 (245)
T ss_pred HHcCCCCEEEECCCCC
Confidence 479999999853
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.68 E-value=1.8e-07 Score=91.00 Aligned_cols=80 Identities=15% Similarity=0.057 Sum_probs=59.9
Q ss_pred CeEEEEcCCc--hHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 11 FDVIILGASG--FTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 11 ~~ilV~GATG--~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
..++|+||++ .||+.+++.|+++| ++|++.+|+. +.++..+++.. ......++.+|++|+++++++++
T Consensus 9 k~~lITGas~~~GIG~a~a~~la~~G-------~~v~~~~r~~-~~~~~~~~l~~-~~g~~~~~~~Dv~~~~~v~~~~~~ 79 (260)
T PRK06603 9 KKGLITGIANNMSISWAIAQLAKKHG-------AELWFTYQSE-VLEKRVKPLAE-EIGCNFVSELDVTNPKSISNLFDD 79 (260)
T ss_pred cEEEEECCCCCcchHHHHHHHHHHcC-------CEEEEEeCch-HHHHHHHHHHH-hcCCceEEEccCCCHHHHHHHHHH
Confidence 5799999997 89999999999998 7999999984 33333333321 01122357899999999988875
Q ss_pred ------CccEEeecCCCC
Q 012947 88 ------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (452)
+.|+||||+|..
T Consensus 80 ~~~~~g~iDilVnnag~~ 97 (260)
T PRK06603 80 IKEKWGSFDFLLHGMAFA 97 (260)
T ss_pred HHHHcCCccEEEEccccC
Confidence 479999999853
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=98.68 E-value=7.3e-08 Score=89.93 Aligned_cols=112 Identities=13% Similarity=0.058 Sum_probs=82.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
+..+++|+||||.+|+.+++.|++.+ .+|.+++|+.++++++.+.+.. .....+..+|..|.+++.+.+++
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g-------~~V~l~~R~~~~~~~l~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~ 97 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREG-------ARVVLVGRDLERAQKAADSLRA--RFGEGVGAVETSDDAARAAAIKG 97 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEcCCHHHHHHHHHHHHh--hcCCcEEEeeCCCHHHHHHHHhc
Confidence 34689999999999999999999987 7999999999999888877631 12456777899999999999999
Q ss_pred ccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHH
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERM 130 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~ 130 (452)
+|+||++.. ...+.....+.+.+.+.-.+|+...++....+
T Consensus 98 ~diVi~at~-~g~~~~~~~~~~~~~~~vv~D~~~~~~~~~~~ 138 (194)
T cd01078 98 ADVVFAAGA-AGVELLEKLAWAPKPLAVAADVNAVPPVGIEG 138 (194)
T ss_pred CCEEEECCC-CCceechhhhcccCceeEEEEccCCCCCCccc
Confidence 999999764 22221122222222345688888776655444
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.68 E-value=5e-08 Score=97.03 Aligned_cols=81 Identities=17% Similarity=0.137 Sum_probs=63.1
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh--HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT--RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~--kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
.+++|+||+|+||+.++++|+++| ++|++..|+.+ .++++.+.+.. ...++.++.+|++|+++++++++
T Consensus 56 k~vlITGas~gIG~~~a~~l~~~G-------~~V~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~ 127 (300)
T PRK06128 56 RKALITGADSGIGRATAIAFAREG-------ADIALNYLPEEEQDAAEVVQLIQA-EGRKAVALPGDLKDEAFCRQLVER 127 (300)
T ss_pred CEEEEecCCCcHHHHHHHHHHHcC-------CEEEEEeCCcchHHHHHHHHHHHH-cCCeEEEEecCCCCHHHHHHHHHH
Confidence 579999999999999999999998 78888877543 34444444321 12456788999999999888775
Q ss_pred ------CccEEeecCCCC
Q 012947 88 ------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (452)
+.|+||||||..
T Consensus 128 ~~~~~g~iD~lV~nAg~~ 145 (300)
T PRK06128 128 AVKELGGLDILVNIAGKQ 145 (300)
T ss_pred HHHHhCCCCEEEECCccc
Confidence 579999999853
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=2.6e-07 Score=88.73 Aligned_cols=84 Identities=14% Similarity=0.167 Sum_probs=65.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCC--CHHHHHHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTT--DPPSLHRLC 86 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~--d~~sl~~~~ 86 (452)
+...++|+||+|++|..++++|++.| ++|++.+|+.++++++.+++......++.++.+|++ +++++.+++
T Consensus 11 ~~k~vlItG~~g~iG~~la~~l~~~G-------~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~ 83 (247)
T PRK08945 11 KDRIILVTGAGDGIGREAALTYARHG-------ATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLA 83 (247)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCC-------CcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHH
Confidence 45789999999999999999999988 799999999998887777664211235677888886 566555544
Q ss_pred c-------CccEEeecCCCC
Q 012947 87 S-------QTKLLLNCVGPY 99 (452)
Q Consensus 87 ~-------~~dvVIn~aGp~ 99 (452)
+ +.|+|||++|..
T Consensus 84 ~~~~~~~~~id~vi~~Ag~~ 103 (247)
T PRK08945 84 DTIEEQFGRLDGVLHNAGLL 103 (247)
T ss_pred HHHHHHhCCCCEEEECCccc
Confidence 3 579999999853
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=98.67 E-value=5.6e-08 Score=94.79 Aligned_cols=83 Identities=12% Similarity=0.099 Sum_probs=62.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHH----HH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLH----RL 85 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR-~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~----~~ 85 (452)
..++|+||+|+||+.+++.|+++| ++|++++| +.++++++.+++......++..+.+|++|++++. ++
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G-------~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~ 74 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEG-------YRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAI 74 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCC-------CeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHH
Confidence 368999999999999999999998 78888765 5677777776663211234567889999987653 33
Q ss_pred H-------cCccEEeecCCCCC
Q 012947 86 C-------SQTKLLLNCVGPYR 100 (452)
Q Consensus 86 ~-------~~~dvVIn~aGp~~ 100 (452)
+ .++|+||||||.+.
T Consensus 75 ~~~~~~~~g~iD~lv~nAG~~~ 96 (267)
T TIGR02685 75 IDACFRAFGRCDVLVNNASAFY 96 (267)
T ss_pred HHHHHHccCCceEEEECCccCC
Confidence 3 25899999999643
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=1e-07 Score=90.52 Aligned_cols=71 Identities=15% Similarity=0.063 Sum_probs=60.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..++|+||||++|+.++++|+++| ++|++.+|+.++ .. ...++.+|++|+++++++++
T Consensus 4 k~vlItG~s~~iG~~ia~~l~~~G-------~~v~~~~r~~~~------~~------~~~~~~~D~~~~~~~~~~~~~~~ 64 (234)
T PRK07577 4 RTVLVTGATKGIGLALSLRLANLG-------HQVIGIARSAID------DF------PGELFACDLADIEQTAATLAQIN 64 (234)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCC-------CEEEEEeCCccc------cc------CceEEEeeCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 799999998764 11 12578999999999888776
Q ss_pred ---CccEEeecCCCCC
Q 012947 88 ---QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ---~~dvVIn~aGp~~ 100 (452)
++|+||||+|...
T Consensus 65 ~~~~~d~vi~~ag~~~ 80 (234)
T PRK07577 65 EIHPVDAIVNNVGIAL 80 (234)
T ss_pred HhCCCcEEEECCCCCC
Confidence 5799999999654
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=9.7e-08 Score=96.92 Aligned_cols=80 Identities=15% Similarity=0.231 Sum_probs=58.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceE-EEEEecChhH--HHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKS-LALAGRNPTR--VKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~-v~iagR~~~k--l~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
.+|+|+|||||+|+++++.|++++ .+ +++..|...+ ...+. .+. ...++.++.+|+.|.++++++++
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g-------~~~v~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~Dl~d~~~~~~~~~ 71 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINET-------SDAVVVVDKLTYAGNLMSLA-PVA--QSERFAFEKVDICDRAELARVFT 71 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcC-------CCEEEEEecCccccchhhhh-hcc--cCCceEEEECCCcChHHHHHHHh
Confidence 379999999999999999999988 44 4445554321 11111 111 12356788999999999999998
Q ss_pred C--ccEEeecCCCCC
Q 012947 88 Q--TKLLLNCVGPYR 100 (452)
Q Consensus 88 ~--~dvVIn~aGp~~ 100 (452)
+ +|+||||||...
T Consensus 72 ~~~~D~Vih~A~~~~ 86 (355)
T PRK10217 72 EHQPDCVMHLAAESH 86 (355)
T ss_pred hcCCCEEEECCcccC
Confidence 4 899999998653
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.6e-07 Score=93.16 Aligned_cols=82 Identities=13% Similarity=0.073 Sum_probs=65.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh-HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~-kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++|+||+|++|..++++|+++| ++|++++|+.+ .++.+.+.+.. ...++.++.+|++|.++++++++
T Consensus 46 ~k~iLItGasggIG~~la~~l~~~G-------~~V~l~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~ 117 (290)
T PRK06701 46 GKVALITGGDSGIGRAVAVLFAKEG-------ADIAIVYLDEHEDANETKQRVEK-EGVKCLLIPGDVSDEAFCKDAVEE 117 (290)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCcchHHHHHHHHHHh-cCCeEEEEEccCCCHHHHHHHHHH
Confidence 3579999999999999999999998 79999999854 34444444421 12457789999999999988775
Q ss_pred ------CccEEeecCCCC
Q 012947 88 ------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (452)
+.|+||||+|..
T Consensus 118 i~~~~~~iD~lI~~Ag~~ 135 (290)
T PRK06701 118 TVRELGRLDILVNNAAFQ 135 (290)
T ss_pred HHHHcCCCCEEEECCccc
Confidence 479999999864
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.65 E-value=8e-08 Score=92.33 Aligned_cols=74 Identities=16% Similarity=0.183 Sum_probs=61.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~- 88 (452)
..+++|+||+|++|+.++++|+++| ++|++.+|+. + .. ...++.++.+|+.|++++++++++
T Consensus 8 ~k~vlItGas~~iG~~la~~l~~~G-------~~v~~~~~~~--~----~~----~~~~~~~~~~D~~~~~~~~~~~~~~ 70 (252)
T PRK08220 8 GKTVWVTGAAQGIGYAVALAFVEAG-------AKVIGFDQAF--L----TQ----EDYPFATFVLDVSDAAAVAQVCQRL 70 (252)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEecch--h----hh----cCCceEEEEecCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 7999999986 1 11 124678899999999999988764
Q ss_pred ------ccEEeecCCCCC
Q 012947 89 ------TKLLLNCVGPYR 100 (452)
Q Consensus 89 ------~dvVIn~aGp~~ 100 (452)
.|+||||+|...
T Consensus 71 ~~~~~~id~vi~~ag~~~ 88 (252)
T PRK08220 71 LAETGPLDVLVNAAGILR 88 (252)
T ss_pred HHHcCCCCEEEECCCcCC
Confidence 799999999653
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.5e-07 Score=91.33 Aligned_cols=82 Identities=12% Similarity=0.052 Sum_probs=61.9
Q ss_pred CCeEEEEcCCc--hHHHHHHHHHHHcCCCCCCCceEEEEEecC-----------hhHHHHHHHHhCCCCCCCccEEEEeC
Q 012947 10 LFDVIILGASG--FTGKYVVREALKLFNFPSSPIKSLALAGRN-----------PTRVKQALQWASPSHSLSIPILTADT 76 (452)
Q Consensus 10 ~~~ilV~GATG--~iG~~va~~L~~~g~~~~~~~~~v~iagR~-----------~~kl~~l~~~l~~~~~~~v~~v~~Dl 76 (452)
...++|+|||| ++|+.++++|+++| .+|++++|+ .++++++.+++.. ...++.++.+|+
T Consensus 6 ~k~vlVtGas~~~giG~~~a~~l~~~G-------~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~D~ 77 (256)
T PRK12859 6 NKVAVVTGVSRLDGIGAAICKELAEAG-------ADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLK-NGVKVSSMELDL 77 (256)
T ss_pred CcEEEEECCCCCCChHHHHHHHHHHCC-------CeEEEEecccccccccccccHHHHHHHHHHHHh-cCCeEEEEEcCC
Confidence 35899999995 89999999999998 788887542 2333344444421 234677889999
Q ss_pred CCHHHHHHHHc-------CccEEeecCCCC
Q 012947 77 TDPPSLHRLCS-------QTKLLLNCVGPY 99 (452)
Q Consensus 77 ~d~~sl~~~~~-------~~dvVIn~aGp~ 99 (452)
+|.+++.++++ ..|+|||++|..
T Consensus 78 ~~~~~i~~~~~~~~~~~g~id~li~~ag~~ 107 (256)
T PRK12859 78 TQNDAPKELLNKVTEQLGYPHILVNNAAYS 107 (256)
T ss_pred CCHHHHHHHHHHHHHHcCCCcEEEECCCCC
Confidence 99999988875 369999999854
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.64 E-value=8.2e-08 Score=92.85 Aligned_cols=81 Identities=14% Similarity=0.044 Sum_probs=61.4
Q ss_pred CeEEEEcCCc--hHHHHHHHHHHHcCCCCCCCceEEEEEecC-----------hhHHHHHHHHhCCCCCCCccEEEEeCC
Q 012947 11 FDVIILGASG--FTGKYVVREALKLFNFPSSPIKSLALAGRN-----------PTRVKQALQWASPSHSLSIPILTADTT 77 (452)
Q Consensus 11 ~~ilV~GATG--~iG~~va~~L~~~g~~~~~~~~~v~iagR~-----------~~kl~~l~~~l~~~~~~~v~~v~~Dl~ 77 (452)
..++|+|||| ++|+.++++|+++| ++|++.+|+ ......+.+++.. ...++.++.+|++
T Consensus 6 k~vlItGas~~~giG~~la~~l~~~G-------~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~ 77 (256)
T PRK12748 6 KIALVTGASRLNGIGAAVCRRLAAKG-------IDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIES-YGVRCEHMEIDLS 77 (256)
T ss_pred cEEEEeCCCCCCCHHHHHHHHHHHcC-------CcEEEEcCCccccccccccchhhHHHHHHHHHh-cCCeEEEEECCCC
Confidence 4699999995 79999999999998 789999987 2221123333321 1346788999999
Q ss_pred CHHHHHHHHc-------CccEEeecCCCC
Q 012947 78 DPPSLHRLCS-------QTKLLLNCVGPY 99 (452)
Q Consensus 78 d~~sl~~~~~-------~~dvVIn~aGp~ 99 (452)
|++++.++++ ..|+|||++|..
T Consensus 78 ~~~~~~~~~~~~~~~~g~id~vi~~ag~~ 106 (256)
T PRK12748 78 QPYAPNRVFYAVSERLGDPSILINNAAYS 106 (256)
T ss_pred CHHHHHHHHHHHHHhCCCCCEEEECCCcC
Confidence 9999887765 369999999864
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=98.64 E-value=7e-08 Score=96.46 Aligned_cols=79 Identities=19% Similarity=0.167 Sum_probs=66.2
Q ss_pred EEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc------
Q 012947 14 IILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS------ 87 (452)
Q Consensus 14 lV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~------ 87 (452)
+|+||+++||..++++|+++|. ++|++.+|+.++++++.+++.. ...++.++.+|++|.++++++++
T Consensus 1 lITGas~GIG~aia~~l~~~G~------~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 73 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGK------WHVVMACRDFLKAERAAKSAGM-PKDSYTVMHLDLASLDSVRQFVDNFRRSG 73 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCC------CEEEEEeCCHHHHHHHHHHhcC-CCCeEEEEEecCCCHHHHHHHHHHHHhcC
Confidence 6999999999999999999873 5899999999998888777642 12356788999999999988775
Q ss_pred -CccEEeecCCCC
Q 012947 88 -QTKLLLNCVGPY 99 (452)
Q Consensus 88 -~~dvVIn~aGp~ 99 (452)
..|+||||||..
T Consensus 74 ~~iD~lInnAG~~ 86 (308)
T PLN00015 74 RPLDVLVCNAAVY 86 (308)
T ss_pred CCCCEEEECCCcC
Confidence 479999999964
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.64 E-value=2e-07 Score=89.46 Aligned_cols=81 Identities=14% Similarity=0.114 Sum_probs=61.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR-~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
..+++|+||+|++|+.++++|++++ +++++..| +.+.+....+.+.. ...++.++.+|++|++++.++++
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g-------~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~ 77 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEG-------SLVVVNAKKRAEEMNETLKMVKE-NGGEGIGVLADVSTREGCETLAKA 77 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCC-------CEEEEEeCCChHHHHHHHHHHHH-cCCeeEEEEeccCCHHHHHHHHHH
Confidence 3579999999999999999999988 78877775 44444444433321 12356688899999999888776
Q ss_pred ------CccEEeecCCC
Q 012947 88 ------QTKLLLNCVGP 98 (452)
Q Consensus 88 ------~~dvVIn~aGp 98 (452)
+.|+|||++|.
T Consensus 78 ~~~~~~~~d~vi~~ag~ 94 (252)
T PRK06077 78 TIDRYGVADILVNNAGL 94 (252)
T ss_pred HHHHcCCCCEEEECCCC
Confidence 47999999985
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=98.63 E-value=2.1e-07 Score=92.55 Aligned_cols=79 Identities=18% Similarity=0.321 Sum_probs=59.7
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--Cc
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--QT 89 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--~~ 89 (452)
+|+|+||||++|+.+++.|++++ ++|.+.+|......+...... ...++.++.+|++|++++.++++ ++
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g-------~~V~~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~ 71 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESG-------HEVVVLDNLSNGSPEALKRGE--RITRVTFVEGDLRDRELLDRLFEEHKI 71 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCC-------CeEEEEeCCCccchhhhhhhc--cccceEEEECCCCCHHHHHHHHHhCCC
Confidence 58999999999999999999988 688877664332222222211 01256788999999999999987 68
Q ss_pred cEEeecCCCC
Q 012947 90 KLLLNCVGPY 99 (452)
Q Consensus 90 dvVIn~aGp~ 99 (452)
|+||||+|..
T Consensus 72 d~vv~~ag~~ 81 (328)
T TIGR01179 72 DAVIHFAGLI 81 (328)
T ss_pred cEEEECcccc
Confidence 9999999965
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.2e-07 Score=90.17 Aligned_cols=79 Identities=14% Similarity=0.174 Sum_probs=62.8
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh-hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC---
Q 012947 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ--- 88 (452)
Q Consensus 13 ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~-~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~--- 88 (452)
++|+|++|++|+.++++|+++| +++++++|+. ++++.+.+.+.. ...++.++.+|++|++++++++++
T Consensus 1 vlItG~~g~iG~~la~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~ 72 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEG-------AKVIITYRSSEEGAEEVVEELKA-YGVKALGVVCDVSDREDVKAVVEEIEE 72 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCchhHHHHHHHHHHh-cCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 5899999999999999999998 7899998875 455555444421 123577899999999999888764
Q ss_pred ----ccEEeecCCCC
Q 012947 89 ----TKLLLNCVGPY 99 (452)
Q Consensus 89 ----~dvVIn~aGp~ 99 (452)
.|+|||++|..
T Consensus 73 ~~~~id~vi~~ag~~ 87 (239)
T TIGR01830 73 ELGPIDILVNNAGIT 87 (239)
T ss_pred HhCCCCEEEECCCCC
Confidence 59999999964
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=98.63 E-value=2.3e-07 Score=102.43 Aligned_cols=105 Identities=13% Similarity=0.243 Sum_probs=77.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC- 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~--~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~- 86 (452)
.++|+|+|||||||++++++|+++++ .++|.+.+|.. ++++.+.... ...++.++.+|++|.+.+.+++
T Consensus 6 ~~~VLVTGatGfIG~~lv~~Ll~~g~-----~~~V~~~d~~~~~~~~~~l~~~~---~~~~v~~~~~Dl~d~~~~~~~~~ 77 (668)
T PLN02260 6 PKNILITGAAGFIASHVANRLIRNYP-----DYKIVVLDKLDYCSNLKNLNPSK---SSPNFKFVKGDIASADLVNYLLI 77 (668)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHhCC-----CCEEEEEeCCCccchhhhhhhcc---cCCCeEEEECCCCChHHHHHHHh
Confidence 46899999999999999999999852 16888888742 2333322211 1246889999999999888765
Q ss_pred -cCccEEeecCCCCCCC----------------CHHHHHHHHHhC-C-cEEEecC
Q 012947 87 -SQTKLLLNCVGPYRLH----------------GDPVAAACVHSG-C-DYLDISG 122 (452)
Q Consensus 87 -~~~dvVIn~aGp~~~~----------------~~~vv~ac~~~g-~-~yvDlsg 122 (452)
.++|+|||+|+..... ...++++|.+.+ + ++|.++.
T Consensus 78 ~~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS 132 (668)
T PLN02260 78 TEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVST 132 (668)
T ss_pred hcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcc
Confidence 5799999999864321 145889999877 4 6887764
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.62 E-value=2.2e-07 Score=103.80 Aligned_cols=97 Identities=16% Similarity=0.180 Sum_probs=78.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
++|+|+|||||+|++++++|+++| ++|++.+|+.... + ..++.++.+|+.|.+++.++++++|
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G-------~~Vv~l~R~~~~~------~----~~~v~~v~gDL~D~~~l~~al~~vD 63 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQG-------HEVVGIARHRPDS------W----PSSADFIAADIRDATAVESAMTGAD 63 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCc-------CEEEEEECCchhh------c----ccCceEEEeeCCCHHHHHHHHhCCC
Confidence 479999999999999999999998 7999999975321 1 1257889999999999999999999
Q ss_pred EEeecCCCCCCC-------CHHHHHHHHHhCC-cEEEecCcH
Q 012947 91 LLLNCVGPYRLH-------GDPVAAACVHSGC-DYLDISGEP 124 (452)
Q Consensus 91 vVIn~aGp~~~~-------~~~vv~ac~~~g~-~yvDlsge~ 124 (452)
+|||||+..... ..+++++|.+.++ ++|.++...
T Consensus 64 ~VVHlAa~~~~~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~ 105 (854)
T PRK05865 64 VVAHCAWVRGRNDHINIDGTANVLKAMAETGTGRIVFTSSGH 105 (854)
T ss_pred EEEECCCcccchHHHHHHHHHHHHHHHHHcCCCeEEEECCcH
Confidence 999999864321 2568899999887 678777643
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.61 E-value=2.3e-07 Score=102.01 Aligned_cols=100 Identities=17% Similarity=0.292 Sum_probs=73.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHH--cCCCCCCCceEEEEEecChh--HHHHHHHHhCCCCCCCccEEEEeCCCH------H
Q 012947 11 FDVIILGASGFTGKYVVREALK--LFNFPSSPIKSLALAGRNPT--RVKQALQWASPSHSLSIPILTADTTDP------P 80 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~--~g~~~~~~~~~v~iagR~~~--kl~~l~~~l~~~~~~~v~~v~~Dl~d~------~ 80 (452)
++|+|||||||+|++++++|++ .+ .+|.+++|+.. +++.+...+. ..++.++.+|+.|+ +
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g-------~~V~~l~R~~~~~~~~~~~~~~~---~~~v~~~~~Dl~~~~~~~~~~ 70 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRRE-------ATVHVLVRRQSLSRLEALAAYWG---ADRVVPLVGDLTEPGLGLSEA 70 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCC-------CEEEEEECcchHHHHHHHHHhcC---CCcEEEEecccCCccCCcCHH
Confidence 4799999999999999999995 44 78999999653 3333333321 24688999999984 5
Q ss_pred HHHHHHcCccEEeecCCCCCCC-------------CHHHHHHHHHhCC-cEEEec
Q 012947 81 SLHRLCSQTKLLLNCVGPYRLH-------------GDPVAAACVHSGC-DYLDIS 121 (452)
Q Consensus 81 sl~~~~~~~dvVIn~aGp~~~~-------------~~~vv~ac~~~g~-~yvDls 121 (452)
.++++ +++|+||||||.+... ..+++++|.+.++ ++|.++
T Consensus 71 ~~~~l-~~~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~S 124 (657)
T PRK07201 71 DIAEL-GDIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQAATFHHVS 124 (657)
T ss_pred HHHHh-cCCCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEe
Confidence 66666 8999999999865321 1567888988865 466555
|
|
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.61 E-value=8.6e-07 Score=83.15 Aligned_cols=118 Identities=20% Similarity=0.191 Sum_probs=83.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEE-EecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLAL-AGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~i-agR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..++|+||+.+||.-++++|.+... .++++ ..|++++..+..+.... .+.++.+++.|+++.++++++++
T Consensus 4 ksv~ItGaNRGIGlgLVk~llk~~~------i~~iiat~r~~e~a~~~l~~k~~-~d~rvHii~Ldvt~deS~~~~~~~V 76 (249)
T KOG1611|consen 4 KSVFITGANRGIGLGLVKELLKDKG------IEVIIATARDPEKAATELALKSK-SDSRVHIIQLDVTCDESIDNFVQEV 76 (249)
T ss_pred ccEEEeccCcchhHHHHHHHhcCCC------cEEEEEecCChHHhhHHHHHhhc-cCCceEEEEEecccHHHHHHHHHHH
Confidence 3599999999999999999997752 45544 55678885444443321 35789999999999999988876
Q ss_pred -------CccEEeecCCCCCCCC------HHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHh
Q 012947 88 -------QTKLLLNCVGPYRLHG------DPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVE 140 (452)
Q Consensus 88 -------~~dvVIn~aGp~~~~~------~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~ 140 (452)
+.+++|||||.+..|. ..++-.|.+ ++..|.....+.+.+.+...+.+
T Consensus 77 ~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~-----tN~v~~il~~Q~~lPLLkkaas~ 137 (249)
T KOG1611|consen 77 EKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYE-----TNAVGPILLTQAFLPLLKKAASK 137 (249)
T ss_pred HhhcccCCceEEEeccceeeecccccCCcHHHHHHHhh-----hcchhHHHHHHHHHHHHHHHhhc
Confidence 4699999999766553 334444444 34446666667776666555543
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=98.60 E-value=8.9e-08 Score=98.51 Aligned_cols=101 Identities=22% Similarity=0.248 Sum_probs=75.6
Q ss_pred CCCeEEEE----cCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHH-------HHhCCCCCCCccEEEEeCC
Q 012947 9 ELFDVIIL----GASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQAL-------QWASPSHSLSIPILTADTT 77 (452)
Q Consensus 9 ~~~~ilV~----GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~-------~~l~~~~~~~v~~v~~Dl~ 77 (452)
...+|+|+ |||||+|++++++|+++| ++|.++.|+.++...+. .++. ...+.++.+|+.
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G-------~~V~~l~R~~~~~~~~~~~~~~~~~~l~---~~~v~~v~~D~~ 120 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAG-------HEVTLFTRGKEPSQKMKKEPFSRFSELS---SAGVKTVWGDPA 120 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHCC-------CEEEEEecCCcchhhhccCchhhhhHhh---hcCceEEEecHH
Confidence 34689999 999999999999999998 89999999876532221 1111 134788999987
Q ss_pred CHHHHHHHH--cCccEEeecCCCCCCCCHHHHHHHHHhCC-cEEEecC
Q 012947 78 DPPSLHRLC--SQTKLLLNCVGPYRLHGDPVAAACVHSGC-DYLDISG 122 (452)
Q Consensus 78 d~~sl~~~~--~~~dvVIn~aGp~~~~~~~vv~ac~~~g~-~yvDlsg 122 (452)
| +.+++ .++|+|||+++.......+++++|.+.|+ ++|.++.
T Consensus 121 d---~~~~~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS 165 (378)
T PLN00016 121 D---VKSKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSS 165 (378)
T ss_pred H---HHhhhccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 7 44444 47899999987543334688999999888 6777765
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.60 E-value=3.5e-07 Score=84.86 Aligned_cols=138 Identities=17% Similarity=0.174 Sum_probs=92.9
Q ss_pred CCCCCeEEEEcCC-chHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 012947 7 IPELFDVIILGAS-GFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 7 ~~~~~~ilV~GAT-G~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
++++..|+|+|++ |+||.++++++++.| +.|....|+.+...++..+. .+.....|+++++++.+.
T Consensus 4 ~~~~k~VlItgcs~GGIG~ala~ef~~~G-------~~V~AtaR~~e~M~~L~~~~------gl~~~kLDV~~~~~V~~v 70 (289)
T KOG1209|consen 4 QSQPKKVLITGCSSGGIGYALAKEFARNG-------YLVYATARRLEPMAQLAIQF------GLKPYKLDVSKPEEVVTV 70 (289)
T ss_pred ccCCCeEEEeecCCcchhHHHHHHHHhCC-------eEEEEEccccchHhhHHHhh------CCeeEEeccCChHHHHHH
Confidence 3456678888865 889999999999999 99999999999988887654 478899999999998876
Q ss_pred Hc--------CccEEeecCCCCCC-----CCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEE--cCCC
Q 012947 86 CS--------QTKLLLNCVGPYRL-----HGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLV--SACG 150 (452)
Q Consensus 86 ~~--------~~dvVIn~aGp~~~-----~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv--~~~G 150 (452)
.. +.|+++|+||.... .....++.|. -+++-|.....+.+. |...+++|-++. +-.|
T Consensus 71 ~~evr~~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f-----~vNvfG~irM~~a~~---h~likaKGtIVnvgSl~~ 142 (289)
T KOG1209|consen 71 SGEVRANPDGKLDLLYNNAGQSCTFPALDATIAAVEQCF-----KVNVFGHIRMCRALS---HFLIKAKGTIVNVGSLAG 142 (289)
T ss_pred HHHHhhCCCCceEEEEcCCCCCcccccccCCHHHHHhhh-----ccceeeeehHHHHHH---HHHHHccceEEEecceeE
Confidence 54 46999999984322 2223333333 345556555555553 455555554432 4445
Q ss_pred CCcchhhHHHHHHhhh
Q 012947 151 FDSIPAELGVMFNSRQ 166 (452)
Q Consensus 151 ~~s~P~dl~~~~~~~~ 166 (452)
+-+.|. -++|.+.|.
T Consensus 143 ~vpfpf-~~iYsAsKA 157 (289)
T KOG1209|consen 143 VVPFPF-GSIYSASKA 157 (289)
T ss_pred Eeccch-hhhhhHHHH
Confidence 545553 244555443
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.57 E-value=2.4e-07 Score=88.17 Aligned_cols=81 Identities=25% Similarity=0.210 Sum_probs=67.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~-- 88 (452)
.+++|+||+|++|+.+++.|+++| ++|++.+|+.++++++.+++.. ..++.++.+|++|++++++++++
T Consensus 6 ~~vlItGa~g~iG~~~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~ 76 (238)
T PRK05786 6 KKVAIIGVSEGLGYAVAYFALKEG-------AQVCINSRNENKLKRMKKTLSK--YGNIHYVVGDVSSTESARNVIEKAA 76 (238)
T ss_pred cEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh--cCCeEEEECCCCCHHHHHHHHHHHH
Confidence 579999999999999999999998 7999999999988777665531 23578889999999999887653
Q ss_pred -----ccEEeecCCCCC
Q 012947 89 -----TKLLLNCVGPYR 100 (452)
Q Consensus 89 -----~dvVIn~aGp~~ 100 (452)
.|.+|+++|.+.
T Consensus 77 ~~~~~id~ii~~ag~~~ 93 (238)
T PRK05786 77 KVLNAIDGLVVTVGGYV 93 (238)
T ss_pred HHhCCCCEEEEcCCCcC
Confidence 599999998654
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=98.56 E-value=2.6e-07 Score=90.75 Aligned_cols=59 Identities=24% Similarity=0.311 Sum_probs=52.2
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc--
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT-- 89 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~-- 89 (452)
+|+|+|||||+|++++++|.++| ++|.+..|+ .+|+.|++++.+++++.
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g-------~~v~~~~r~----------------------~~d~~~~~~~~~~~~~~~~ 51 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEG-------RVVVALTSS----------------------QLDLTDPEALERLLRAIRP 51 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcC-------CEEEEeCCc----------------------ccCCCCHHHHHHHHHhCCC
Confidence 48999999999999999999988 789888884 25888999999999865
Q ss_pred cEEeecCCCC
Q 012947 90 KLLLNCVGPY 99 (452)
Q Consensus 90 dvVIn~aGp~ 99 (452)
|+||||+|+.
T Consensus 52 d~vi~~a~~~ 61 (287)
T TIGR01214 52 DAVVNTAAYT 61 (287)
T ss_pred CEEEECCccc
Confidence 9999999864
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=98.55 E-value=4.4e-07 Score=91.99 Aligned_cols=80 Identities=20% Similarity=0.279 Sum_probs=57.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~--~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
++|+|+|||||+|++++++|++++. ..+++..|.. ...+.+. .+. ...++.++.+|+.|.+++.+++++
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~------~~v~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~Dl~d~~~~~~~~~~ 71 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQ------DSVVNVDKLTYAGNLESLA-DVS--DSERYVFEHADICDRAELDRIFAQ 71 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCC------CeEEEecCCCccchHHHHH-hcc--cCCceEEEEecCCCHHHHHHHHHh
Confidence 4799999999999999999999872 2344444422 2222222 221 123567889999999999999974
Q ss_pred --ccEEeecCCCC
Q 012947 89 --TKLLLNCVGPY 99 (452)
Q Consensus 89 --~dvVIn~aGp~ 99 (452)
+|+||||||..
T Consensus 72 ~~~d~vih~A~~~ 84 (352)
T PRK10084 72 HQPDAVMHLAAES 84 (352)
T ss_pred cCCCEEEECCccc
Confidence 89999999864
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=98.54 E-value=7.4e-07 Score=89.90 Aligned_cols=84 Identities=19% Similarity=0.310 Sum_probs=61.1
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhH------HHHHHHHhCCC--C-C-CCccEEEEeCCC---
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR------VKQALQWASPS--H-S-LSIPILTADTTD--- 78 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~k------l~~l~~~l~~~--~-~-~~v~~v~~Dl~d--- 78 (452)
+|+|+|||||+|++++++|++++. ..+|.+..|+.++ +++..+..... . . .++.++.+|+++
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~-----~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 75 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRST-----QAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRL 75 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCC-----CCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccC
Confidence 489999999999999999999872 1579999997652 22222222110 0 0 467888999875
Q ss_pred ---HHHHHHHHcCccEEeecCCCCC
Q 012947 79 ---PPSLHRLCSQTKLLLNCVGPYR 100 (452)
Q Consensus 79 ---~~sl~~~~~~~dvVIn~aGp~~ 100 (452)
.+.+..+.+++|+||||++...
T Consensus 76 gl~~~~~~~~~~~~d~vih~a~~~~ 100 (367)
T TIGR01746 76 GLSDAEWERLAENVDTIVHNGALVN 100 (367)
T ss_pred CcCHHHHHHHHhhCCEEEeCCcEec
Confidence 3567788889999999998654
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.52 E-value=5.3e-07 Score=94.82 Aligned_cols=78 Identities=13% Similarity=0.070 Sum_probs=63.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC--hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN--PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~--~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
...++|+||+|++|+.++++|+++| .++++.+|+ .++++++.+++ +..++.+|++|+++++++++
T Consensus 210 g~~vlItGasggIG~~la~~l~~~G-------a~vi~~~~~~~~~~l~~~~~~~------~~~~~~~Dv~~~~~~~~~~~ 276 (450)
T PRK08261 210 GKVALVTGAARGIGAAIAEVLARDG-------AHVVCLDVPAAGEALAAVANRV------GGTALALDITAPDAPARIAE 276 (450)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCC-------CEEEEEeCCccHHHHHHHHHHc------CCeEEEEeCCCHHHHHHHHH
Confidence 4679999999999999999999998 799999884 45566665544 23578899999999888776
Q ss_pred -------CccEEeecCCCCC
Q 012947 88 -------QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -------~~dvVIn~aGp~~ 100 (452)
+.|+||||+|...
T Consensus 277 ~~~~~~g~id~vi~~AG~~~ 296 (450)
T PRK08261 277 HLAERHGGLDIVVHNAGITR 296 (450)
T ss_pred HHHHhCCCCCEEEECCCcCC
Confidence 4799999999653
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=98.52 E-value=4.6e-07 Score=87.76 Aligned_cols=83 Identities=16% Similarity=0.301 Sum_probs=54.4
Q ss_pred EEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh---HHHHHHHHhCCC---------CCCCccEEEEeCCCH---
Q 012947 15 ILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT---RVKQALQWASPS---------HSLSIPILTADTTDP--- 79 (452)
Q Consensus 15 V~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~---kl~~l~~~l~~~---------~~~~v~~v~~Dl~d~--- 79 (452)
|||||||+|++++++|+++.+ ..+|.+..|+.+ ..+++.+.+... ...++.++.+|++++
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~-----~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lG 75 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPP-----DVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLG 75 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS------TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG
T ss_pred CcCCCcHHHHHHHHHHHcCCC-----CcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccC
Confidence 799999999999999999973 138999999763 344444443220 146899999999875
Q ss_pred ---HHHHHHHcCccEEeecCCCCCCC
Q 012947 80 ---PSLHRLCSQTKLLLNCVGPYRLH 102 (452)
Q Consensus 80 ---~sl~~~~~~~dvVIn~aGp~~~~ 102 (452)
+..+.+.+++|+|||||+.....
T Consensus 76 L~~~~~~~L~~~v~~IiH~Aa~v~~~ 101 (249)
T PF07993_consen 76 LSDEDYQELAEEVDVIIHCAASVNFN 101 (249)
T ss_dssp --HHHHHHHHHH--EEEE--SS-SBS
T ss_pred CChHHhhccccccceeeecchhhhhc
Confidence 56788889999999999876543
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=98.50 E-value=1.4e-07 Score=93.46 Aligned_cols=87 Identities=26% Similarity=0.462 Sum_probs=60.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--C
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--Q 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--~ 88 (452)
|+|+|+||+|++|++++++|.+++ +++....|+ ..|+.|.+++.++++ +
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~-------~~v~~~~r~----------------------~~dl~d~~~~~~~~~~~~ 51 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERG-------YEVIATSRS----------------------DLDLTDPEAVAKLLEAFK 51 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTS-------EEEEEESTT----------------------CS-TTSHHHHHHHHHHH-
T ss_pred CEEEEECCCCHHHHHHHHHHhhCC-------CEEEEeCch----------------------hcCCCCHHHHHHHHHHhC
Confidence 689999999999999999999877 788888776 247889999999987 4
Q ss_pred ccEEeecCCCCCCC----------------CHHHHHHHHHhCCcEEEecCcHHH
Q 012947 89 TKLLLNCVGPYRLH----------------GDPVAAACVHSGCDYLDISGEPEF 126 (452)
Q Consensus 89 ~dvVIn~aGp~~~~----------------~~~vv~ac~~~g~~yvDlsge~~~ 126 (452)
.|+|||||+..... ...++++|.+.+.++|.+|.+..|
T Consensus 52 pd~Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~~li~~STd~VF 105 (286)
T PF04321_consen 52 PDVVINCAAYTNVDACEKNPEEAYAINVDATKNLAEACKERGARLIHISTDYVF 105 (286)
T ss_dssp -SEEEE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT-EEEEEEEGGGS
T ss_pred CCeEeccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCCcEEEeeccEEE
Confidence 89999999753211 145666777777777766654433
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.50 E-value=1.2e-06 Score=85.20 Aligned_cols=104 Identities=16% Similarity=0.210 Sum_probs=75.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC--hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN--PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~--~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
+++||+||.||||+..+++++++.+. .+|+..+.- ...++.+..-. ..++..++++|+.|.+.+.++++
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d-----~~v~~~DkLTYAgn~~~l~~~~---~~~~~~fv~~DI~D~~~v~~~~~~ 72 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPD-----DHVVNLDKLTYAGNLENLADVE---DSPRYRFVQGDICDRELVDRLFKE 72 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCC-----ceEEEEecccccCCHHHHHhhh---cCCCceEEeccccCHHHHHHHHHh
Confidence 47999999999999999999998842 566766651 22333332222 24688999999999999999999
Q ss_pred -CccEEeecCCCCCC------------C---C-HHHHHHHHHhCC--cEEEecC
Q 012947 88 -QTKLLLNCVGPYRL------------H---G-DPVAAACVHSGC--DYLDISG 122 (452)
Q Consensus 88 -~~dvVIn~aGp~~~------------~---~-~~vv~ac~~~g~--~yvDlsg 122 (452)
+.|+|+|.|.-... + | ..+++|+.+.+. +|+++|.
T Consensus 73 ~~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HIST 126 (340)
T COG1088 73 YQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHIST 126 (340)
T ss_pred cCCCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEecc
Confidence 69999999863221 1 1 567777777764 6777764
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=98.49 E-value=6.9e-07 Score=88.72 Aligned_cols=73 Identities=14% Similarity=0.127 Sum_probs=53.4
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc----C
Q 012947 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS----Q 88 (452)
Q Consensus 13 ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~----~ 88 (452)
|+|+|||||+|+++++.|.+++. ..|.+.+|..... .+. ++ ....+..|+++++.++.+.+ +
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~------~~v~~~~~~~~~~-~~~-~~------~~~~~~~d~~~~~~~~~~~~~~~~~ 66 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGI------TDILVVDNLRDGH-KFL-NL------ADLVIADYIDKEDFLDRLEKGAFGK 66 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCC------ceEEEEecCCCch-hhh-hh------hheeeeccCcchhHHHHHHhhccCC
Confidence 68999999999999999999882 2687777754321 111 11 11345678888888877764 7
Q ss_pred ccEEeecCCCC
Q 012947 89 TKLLLNCVGPY 99 (452)
Q Consensus 89 ~dvVIn~aGp~ 99 (452)
+|+|||+|++.
T Consensus 67 ~D~vvh~A~~~ 77 (314)
T TIGR02197 67 IEAIFHQGACS 77 (314)
T ss_pred CCEEEECcccc
Confidence 99999999864
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=98.48 E-value=4.5e-07 Score=90.17 Aligned_cols=68 Identities=16% Similarity=0.189 Sum_probs=43.5
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCC---HHH-HHHHHc-
Q 012947 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTD---PPS-LHRLCS- 87 (452)
Q Consensus 13 ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d---~~s-l~~~~~- 87 (452)
|+|+|||||+|++++++|++.| ++++++.|+....... .. +..+|+.| .++ ++++++
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g-------~~~v~~~~~~~~~~~~-~~----------~~~~~~~d~~~~~~~~~~~~~~ 63 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKG-------ITDILVVDNLKDGTKF-VN----------LVDLDIADYMDKEDFLAQIMAG 63 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCC-------CceEEEecCCCcchHH-Hh----------hhhhhhhhhhhHHHHHHHHhcc
Confidence 8999999999999999999988 6555555554322111 00 11234433 333 333332
Q ss_pred ----CccEEeecCCC
Q 012947 88 ----QTKLLLNCVGP 98 (452)
Q Consensus 88 ----~~dvVIn~aGp 98 (452)
++|+|||+|+.
T Consensus 64 ~~~~~~d~Vih~A~~ 78 (308)
T PRK11150 64 DDFGDIEAIFHEGAC 78 (308)
T ss_pred cccCCccEEEECcee
Confidence 68999999973
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.48 E-value=5.8e-07 Score=85.07 Aligned_cols=74 Identities=24% Similarity=0.264 Sum_probs=63.1
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc----
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~---- 87 (452)
+++|+||+|++|+.++++|+++| ++|++++|+.++++++.. ..+.++.+|++|.++++++++
T Consensus 3 ~vlvtG~sg~iG~~la~~L~~~G-------~~v~~~~r~~~~~~~~~~-------~~~~~~~~D~~~~~~v~~~~~~~~~ 68 (222)
T PRK06953 3 TVLIVGASRGIGREFVRQYRADG-------WRVIATARDAAALAALQA-------LGAEALALDVADPASVAGLAWKLDG 68 (222)
T ss_pred eEEEEcCCCchhHHHHHHHHhCC-------CEEEEEECCHHHHHHHHh-------ccceEEEecCCCHHHHHHHHHHhcC
Confidence 69999999999999999999988 799999999888766543 135689999999999988653
Q ss_pred -CccEEeecCCCC
Q 012947 88 -QTKLLLNCVGPY 99 (452)
Q Consensus 88 -~~dvVIn~aGp~ 99 (452)
+.|+|||++|..
T Consensus 69 ~~~d~vi~~ag~~ 81 (222)
T PRK06953 69 EALDAAVYVAGVY 81 (222)
T ss_pred CCCCEEEECCCcc
Confidence 479999999976
|
|
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.48 E-value=5.8e-07 Score=89.26 Aligned_cols=138 Identities=12% Similarity=0.061 Sum_probs=95.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh---hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP---TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~---~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
..+++|+|| |++|++++..|++.|. .+|.+.+|+. ++++++.+++.. ....+.+..+|++|.+++.+.+
T Consensus 126 ~k~vlI~GA-GGagrAia~~La~~G~------~~V~I~~R~~~~~~~a~~l~~~l~~-~~~~~~~~~~d~~~~~~~~~~~ 197 (289)
T PRK12548 126 GKKLTVIGA-GGAATAIQVQCALDGA------KEITIFNIKDDFYERAEQTAEKIKQ-EVPECIVNVYDLNDTEKLKAEI 197 (289)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCC------CEEEEEeCCchHHHHHHHHHHHHhh-cCCCceeEEechhhhhHHHhhh
Confidence 357999999 7999999999999982 3599999997 788888777642 1224456678999888899999
Q ss_pred cCccEEeecCCCCCCC---CHHH-HHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHH
Q 012947 87 SQTKLLLNCVGPYRLH---GDPV-AAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMF 162 (452)
Q Consensus 87 ~~~dvVIn~aGp~~~~---~~~v-v~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~ 162 (452)
+.+|+||||..+.... ..++ ....+..+...+|+...+.-+. +-..|++.|..++++. +|..+-
T Consensus 198 ~~~DilINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~P~~T~-----ll~~A~~~G~~~~~G~-------~ML~~Q 265 (289)
T PRK12548 198 ASSDILVNATLVGMKPNDGETNIKDTSVFRKDLVVADTVYNPKKTK-----LLEDAEAAGCKTVGGL-------GMLLWQ 265 (289)
T ss_pred ccCCEEEEeCCCCCCCCCCCCCCCcHHhcCCCCEEEEecCCCCCCH-----HHHHHHHCCCeeeCcH-------HHHHHH
Confidence 9999999997432211 1222 1233444556889987654332 2356788888877654 355555
Q ss_pred Hhhhc
Q 012947 163 NSRQW 167 (452)
Q Consensus 163 ~~~~~ 167 (452)
+...+
T Consensus 266 a~~~f 270 (289)
T PRK12548 266 GAEAY 270 (289)
T ss_pred HHHHH
Confidence 55444
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.48 E-value=4.9e-07 Score=89.45 Aligned_cols=75 Identities=16% Similarity=0.250 Sum_probs=64.0
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc-c
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT-K 90 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~-d 90 (452)
+|+|||||||+|++++++|.++| ++|...+|+..+..... ..+.++.+|++|.+.+.+.++.. |
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~--------~~~~~~~~d~~~~~~~~~~~~~~~d 66 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAG-------HDVRGLDRLRDGLDPLL--------SGVEFVVLDLTDRDLVDELAKGVPD 66 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhCC-------CeEEEEeCCCccccccc--------cccceeeecccchHHHHHHHhcCCC
Confidence 49999999999999999999998 89999999887654322 25688899999998889999888 9
Q ss_pred EEeecCCCCCC
Q 012947 91 LLLNCVGPYRL 101 (452)
Q Consensus 91 vVIn~aGp~~~ 101 (452)
+|||+++....
T Consensus 67 ~vih~aa~~~~ 77 (314)
T COG0451 67 AVIHLAAQSSV 77 (314)
T ss_pred EEEEccccCch
Confidence 99999986643
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.48 E-value=9.2e-07 Score=80.43 Aligned_cols=74 Identities=26% Similarity=0.350 Sum_probs=67.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
|+|-|+||||-+|+.++++..++| ++|+.+.||++|+.+. ..+.+++.|+-|++++.+.+.+.|
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RG-------HeVTAivRn~~K~~~~---------~~~~i~q~Difd~~~~a~~l~g~D 64 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRG-------HEVTAIVRNASKLAAR---------QGVTILQKDIFDLTSLASDLAGHD 64 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCC-------CeeEEEEeChHhcccc---------ccceeecccccChhhhHhhhcCCc
Confidence 589999999999999999999999 8999999999998543 356789999999999999999999
Q ss_pred EEeecCCCCC
Q 012947 91 LLLNCVGPYR 100 (452)
Q Consensus 91 vVIn~aGp~~ 100 (452)
+||+..|...
T Consensus 65 aVIsA~~~~~ 74 (211)
T COG2910 65 AVISAFGAGA 74 (211)
T ss_pred eEEEeccCCC
Confidence 9999998764
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.47 E-value=7.1e-07 Score=86.60 Aligned_cols=74 Identities=28% Similarity=0.349 Sum_probs=67.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
++|+|+||||++|++++++|.+++ ++|.++.|+.+++..+. ..+++...|+.++.++...+++.+
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~-------~~v~~~~r~~~~~~~~~--------~~v~~~~~d~~~~~~l~~a~~G~~ 65 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARG-------HEVRAAVRNPEAAAALA--------GGVEVVLGDLRDPKSLVAGAKGVD 65 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCC-------CEEEEEEeCHHHHHhhc--------CCcEEEEeccCCHhHHHHHhcccc
Confidence 479999999999999999999998 89999999999987654 368999999999999999999999
Q ss_pred EEeecCCCC
Q 012947 91 LLLNCVGPY 99 (452)
Q Consensus 91 vVIn~aGp~ 99 (452)
.++++.+..
T Consensus 66 ~~~~i~~~~ 74 (275)
T COG0702 66 GVLLISGLL 74 (275)
T ss_pred EEEEEeccc
Confidence 999998744
|
|
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.46 E-value=8.2e-07 Score=89.90 Aligned_cols=107 Identities=21% Similarity=0.335 Sum_probs=76.3
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 8 ~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
.+...++|+||+||+|++++++|.+.++ ..++.+++.......-..+..+. ....+..+.+|+.|..++..+++
T Consensus 2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~-----~~~irv~D~~~~~~~~~~e~~~~-~~~~v~~~~~D~~~~~~i~~a~~ 75 (361)
T KOG1430|consen 2 EKKLSVLVTGGSGFLGQHLVQALLENEL-----KLEIRVVDKTPTQSNLPAELTGF-RSGRVTVILGDLLDANSISNAFQ 75 (361)
T ss_pred CcCCEEEEECCccHHHHHHHHHHHhccc-----ccEEEEeccCccccccchhhhcc-cCCceeEEecchhhhhhhhhhcc
Confidence 3457899999999999999999999983 27899999876432111121110 14678999999999999999999
Q ss_pred CccEEeec-CCCCCCC--------------C-HHHHHHHHHhCCc-EEEec
Q 012947 88 QTKLLLNC-VGPYRLH--------------G-DPVAAACVHSGCD-YLDIS 121 (452)
Q Consensus 88 ~~dvVIn~-aGp~~~~--------------~-~~vv~ac~~~g~~-yvDls 121 (452)
++ .|+|| |++.... | .+++++|.+.++. .|.+|
T Consensus 76 ~~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtS 125 (361)
T KOG1430|consen 76 GA-VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTS 125 (361)
T ss_pred Cc-eEEEeccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEec
Confidence 99 55555 4443221 2 6788888888875 44433
|
|
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=98.46 E-value=1.3e-06 Score=86.06 Aligned_cols=78 Identities=19% Similarity=0.273 Sum_probs=64.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec----ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR----NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR----~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
..|+||||.||||.+++-+|.+.| +.|.+++. ..+.+..+.+-.. ....+.++.+|+.|.+.|++++
T Consensus 3 ~~VLVtGgaGyiGsht~l~L~~~g-------y~v~~vDNl~n~~~~sl~r~~~l~~--~~~~v~f~~~Dl~D~~~L~kvF 73 (343)
T KOG1371|consen 3 KHVLVTGGAGYIGSHTVLALLKRG-------YGVVIVDNLNNSYLESLKRVRQLLG--EGKSVFFVEGDLNDAEALEKLF 73 (343)
T ss_pred cEEEEecCCcceehHHHHHHHhCC-------CcEEEEecccccchhHHHHHHHhcC--CCCceEEEEeccCCHHHHHHHH
Confidence 579999999999999999999998 78888774 3445555444432 2468999999999999999999
Q ss_pred c--CccEEeecCC
Q 012947 87 S--QTKLLLNCVG 97 (452)
Q Consensus 87 ~--~~dvVIn~aG 97 (452)
+ ..|.|+|.|+
T Consensus 74 ~~~~fd~V~Hfa~ 86 (343)
T KOG1371|consen 74 SEVKFDAVMHFAA 86 (343)
T ss_pred hhcCCceEEeehh
Confidence 8 5799999986
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=98.46 E-value=3.5e-07 Score=91.47 Aligned_cols=81 Identities=9% Similarity=0.045 Sum_probs=60.1
Q ss_pred CCeEEEEcC--CchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCC--------C-C---CCccEEEEe
Q 012947 10 LFDVIILGA--SGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS--------H-S---LSIPILTAD 75 (452)
Q Consensus 10 ~~~ilV~GA--TG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~--------~-~---~~v~~v~~D 75 (452)
...++|||| +.+||+.+++.|++.| .+|++ +|+.++++++..++... . . .....+.+|
T Consensus 9 gk~alITGa~~s~GIG~a~A~~la~~G-------a~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 80 (303)
T PLN02730 9 GKRAFIAGVADDNGYGWAIAKALAAAG-------AEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLD 80 (303)
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHHHCC-------CEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecc
Confidence 457999999 8999999999999999 89988 89988888877555310 0 0 113567788
Q ss_pred C--CCH------------------HHHHHHHc-------CccEEeecCCC
Q 012947 76 T--TDP------------------PSLHRLCS-------QTKLLLNCVGP 98 (452)
Q Consensus 76 l--~d~------------------~sl~~~~~-------~~dvVIn~aGp 98 (452)
+ +++ ++++++++ +.|+||||||.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~ 130 (303)
T PLN02730 81 AVFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLAN 130 (303)
T ss_pred eecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 8 333 36666655 47999999974
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.44 E-value=7.1e-07 Score=84.89 Aligned_cols=72 Identities=21% Similarity=0.147 Sum_probs=58.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCH-HHHHHHHcCc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDP-PSLHRLCSQT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~-~sl~~~~~~~ 89 (452)
..++|+||+|++|+.++++|+++| ++|++++|+.... . ..++..+.+|++|+ +.+.+.+.++
T Consensus 6 k~~lVtGas~~iG~~ia~~l~~~G-------~~v~~~~r~~~~~------~----~~~~~~~~~D~~~~~~~~~~~~~~i 68 (235)
T PRK06550 6 KTVLITGAASGIGLAQARAFLAQG-------AQVYGVDKQDKPD------L----SGNFHFLQLDLSDDLEPLFDWVPSV 68 (235)
T ss_pred CEEEEcCCCchHHHHHHHHHHHCC-------CEEEEEeCCcccc------c----CCcEEEEECChHHHHHHHHHhhCCC
Confidence 579999999999999999999998 7999999986432 1 23567889999987 4455555678
Q ss_pred cEEeecCCCC
Q 012947 90 KLLLNCVGPY 99 (452)
Q Consensus 90 dvVIn~aGp~ 99 (452)
|+|||++|..
T Consensus 69 d~lv~~ag~~ 78 (235)
T PRK06550 69 DILCNTAGIL 78 (235)
T ss_pred CEEEECCCCC
Confidence 9999999854
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=98.41 E-value=1.4e-06 Score=83.67 Aligned_cols=84 Identities=18% Similarity=0.175 Sum_probs=62.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhH--HHHHHHHhCCCCC-CCccEEEEeCCC-HHHHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR--VKQALQWASPSHS-LSIPILTADTTD-PPSLHR 84 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~k--l~~l~~~l~~~~~-~~v~~v~~Dl~d-~~sl~~ 84 (452)
....++|+||++++|+.+++.|+++| .+++++.|+.++ ++.+.+... ... ..+....+|+++ .++++.
T Consensus 4 ~~~~ilITGas~GiG~aia~~l~~~G-------~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dvs~~~~~v~~ 75 (251)
T COG1028 4 SGKVALVTGASSGIGRAIARALAREG-------ARVVVAARRSEEEAAEALAAAIK-EAGGGRAAAVAADVSDDEESVEA 75 (251)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCC-------CeEEEEcCCCchhhHHHHHHHHH-hcCCCcEEEEEecCCCCHHHHHH
Confidence 34679999999999999999999888 788888887654 333333321 011 256677799998 888877
Q ss_pred HHc-------CccEEeecCCCCC
Q 012947 85 LCS-------QTKLLLNCVGPYR 100 (452)
Q Consensus 85 ~~~-------~~dvVIn~aGp~~ 100 (452)
+++ +.|++|||||...
T Consensus 76 ~~~~~~~~~g~id~lvnnAg~~~ 98 (251)
T COG1028 76 LVAAAEEEFGRIDILVNNAGIAG 98 (251)
T ss_pred HHHHHHHHcCCCCEEEECCCCCC
Confidence 665 3799999999754
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=1.1e-06 Score=81.59 Aligned_cols=62 Identities=31% Similarity=0.500 Sum_probs=52.9
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---C
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---Q 88 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~---~ 88 (452)
+++|+||+|++|+.++++|+++ .+|++.+|+.+ .+.+|++|+++++++++ +
T Consensus 2 ~vlItGas~giG~~la~~l~~~--------~~vi~~~r~~~------------------~~~~D~~~~~~~~~~~~~~~~ 55 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR--------HEVITAGRSSG------------------DVQVDITDPASIRALFEKVGK 55 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc--------CcEEEEecCCC------------------ceEecCCChHHHHHHHHhcCC
Confidence 6999999999999999999876 37888888642 25789999999998877 6
Q ss_pred ccEEeecCCCC
Q 012947 89 TKLLLNCVGPY 99 (452)
Q Consensus 89 ~dvVIn~aGp~ 99 (452)
+|+|||++|..
T Consensus 56 id~lv~~ag~~ 66 (199)
T PRK07578 56 VDAVVSAAGKV 66 (199)
T ss_pred CCEEEECCCCC
Confidence 89999999964
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.38 E-value=4.8e-06 Score=81.85 Aligned_cols=138 Identities=16% Similarity=0.082 Sum_probs=102.1
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...-|+|||+-.+.|+.+|++|.+.| ++|.++.-+++..+.+..+.. .++...+..|++++++++++.+
T Consensus 28 ~~k~VlITGCDSGfG~~LA~~L~~~G-------f~V~Agcl~~~gae~L~~~~~---s~rl~t~~LDVT~~esi~~a~~~ 97 (322)
T KOG1610|consen 28 SDKAVLITGCDSGFGRLLAKKLDKKG-------FRVFAGCLTEEGAESLRGETK---SPRLRTLQLDVTKPESVKEAAQW 97 (322)
T ss_pred CCcEEEEecCCcHHHHHHHHHHHhcC-------CEEEEEeecCchHHHHhhhhc---CCcceeEeeccCCHHHHHHHHHH
Confidence 34569999999999999999999999 899999888888888877663 4678888999999999999877
Q ss_pred --------CccEEeecCCCCCCCC------HHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCc
Q 012947 88 --------QTKLLLNCVGPYRLHG------DPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDS 153 (452)
Q Consensus 88 --------~~dvVIn~aGp~~~~~------~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s 153 (452)
+--.||||||.....| ....+.|++ ||+-|....++.+. .+-.+|+..-+++-|.||--+
T Consensus 98 V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~-----vNllG~irvT~~~l-pLlr~arGRvVnvsS~~GR~~ 171 (322)
T KOG1610|consen 98 VKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLN-----VNLLGTIRVTKAFL-PLLRRARGRVVNVSSVLGRVA 171 (322)
T ss_pred HHHhcccccceeEEeccccccccCccccccHHHHHHHHh-----hhhhhHHHHHHHHH-HHHHhccCeEEEecccccCcc
Confidence 2468999999655444 334445544 66778888888774 444556655555667777655
Q ss_pred chhhHHHHHH
Q 012947 154 IPAELGVMFN 163 (452)
Q Consensus 154 ~P~dl~~~~~ 163 (452)
.| -++.|-+
T Consensus 172 ~p-~~g~Y~~ 180 (322)
T KOG1610|consen 172 LP-ALGPYCV 180 (322)
T ss_pred Cc-ccccchh
Confidence 55 2444433
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=98.37 E-value=3.1e-06 Score=90.24 Aligned_cols=87 Identities=17% Similarity=0.218 Sum_probs=61.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh---HHHHHHHHh-------------CC----CCCCCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT---RVKQALQWA-------------SP----SHSLSI 69 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~---kl~~l~~~l-------------~~----~~~~~v 69 (452)
...|+|||||||+|+.+++.|++.++. ..+|.+..|... ..+.+..++ .. ....++
T Consensus 11 ~k~VlvTGaTGFlG~~ll~~LL~~~~~----v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv 86 (491)
T PLN02996 11 NKTILVTGATGFLAKIFVEKILRVQPN----VKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKV 86 (491)
T ss_pred CCeEEEeCCCcHHHHHHHHHHHhhCCC----CCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCE
Confidence 467999999999999999999987631 147888888653 111211111 00 001468
Q ss_pred cEEEEeCC-------CHHHHHHHHcCccEEeecCCCCC
Q 012947 70 PILTADTT-------DPPSLHRLCSQTKLLLNCVGPYR 100 (452)
Q Consensus 70 ~~v~~Dl~-------d~~sl~~~~~~~dvVIn~aGp~~ 100 (452)
.++.+|++ |.+.++++++++|+|||+|+...
T Consensus 87 ~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~ 124 (491)
T PLN02996 87 TPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTN 124 (491)
T ss_pred EEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccC
Confidence 89999998 55567888899999999998644
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=98.36 E-value=2.9e-06 Score=84.59 Aligned_cols=58 Identities=14% Similarity=0.199 Sum_probs=43.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
.++|+|+||+||+|++++++|+++| ++|.+..+ |++|.+.+...++
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g-------~~V~~~~~-------------------------~~~~~~~v~~~l~~~ 56 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQG-------IDFHYGSG-------------------------RLENRASLEADIDAV 56 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCC-------CEEEEecC-------------------------ccCCHHHHHHHHHhc
Confidence 4789999999999999999999998 67754322 2334444554444
Q ss_pred CccEEeecCCCC
Q 012947 88 QTKLLLNCVGPY 99 (452)
Q Consensus 88 ~~dvVIn~aGp~ 99 (452)
++|+|||+||..
T Consensus 57 ~~D~ViH~Aa~~ 68 (298)
T PLN02778 57 KPTHVFNAAGVT 68 (298)
T ss_pred CCCEEEECCccc
Confidence 689999999865
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=98.36 E-value=6.7e-07 Score=85.15 Aligned_cols=76 Identities=25% Similarity=0.397 Sum_probs=58.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
++++|+||+|+||+.++++|++++. ...+.+..|+.... . ...++.++.+|++|.++++++.+
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~-----~~~v~~~~~~~~~~------~---~~~~~~~~~~Dls~~~~~~~~~~~~~ 66 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYP-----DATVHATYRHHKPD------F---QHDNVQWHALDVTDEAEIKQLSEQFT 66 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCC-----CCEEEEEccCCccc------c---ccCceEEEEecCCCHHHHHHHHHhcC
Confidence 4799999999999999999999862 15666666654321 1 12467789999999998877654
Q ss_pred CccEEeecCCCCC
Q 012947 88 QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ~~dvVIn~aGp~~ 100 (452)
+.|+||||+|...
T Consensus 67 ~id~li~~aG~~~ 79 (235)
T PRK09009 67 QLDWLINCVGMLH 79 (235)
T ss_pred CCCEEEECCcccc
Confidence 6899999999754
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=98.31 E-value=5.5e-06 Score=89.84 Aligned_cols=88 Identities=11% Similarity=0.178 Sum_probs=62.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhH---HHHHHHHh-------------CCC----CCCC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR---VKQALQWA-------------SPS----HSLS 68 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~k---l~~l~~~l-------------~~~----~~~~ 68 (452)
+..+|+|||||||+|+.+++.|++.++. ..+|.+..|.... .+++.+++ +.. ...+
T Consensus 118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~----v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~K 193 (605)
T PLN02503 118 RGKNFLITGATGFLAKVLIEKILRTNPD----VGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSK 193 (605)
T ss_pred cCCEEEEcCCchHHHHHHHHHHHHhCCC----CcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCcccccccccc
Confidence 3568999999999999999999987641 1488889885422 22222121 100 0246
Q ss_pred ccEEEEeCCCH------HHHHHHHcCccEEeecCCCCC
Q 012947 69 IPILTADTTDP------PSLHRLCSQTKLLLNCVGPYR 100 (452)
Q Consensus 69 v~~v~~Dl~d~------~sl~~~~~~~dvVIn~aGp~~ 100 (452)
+.++.+|++++ +..+.+.+++|+|||+|+...
T Consensus 194 i~~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~ 231 (605)
T PLN02503 194 LVPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTT 231 (605)
T ss_pred EEEEEeeCCCcccCCCHHHHHHHHhcCCEEEECccccc
Confidence 88899999986 466777788999999998654
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=98.31 E-value=9.7e-07 Score=78.91 Aligned_cols=81 Identities=17% Similarity=0.184 Sum_probs=60.8
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHH---HHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQA---LQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l---~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
.++|+||+|++|.+++++|++++. ..+.+.+|+.++.+.. .+++.. ...++.++.+|++++++++++++.
T Consensus 2 ~~li~Ga~~~iG~~~~~~l~~~g~------~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~ 74 (180)
T smart00822 2 TYLITGGLGGLGLELARWLAERGA------RHLVLLSRSGPDAPGAAELLAELEA-LGAEVTVVACDVADRAALAAALAA 74 (180)
T ss_pred EEEEEcCCChHHHHHHHHHHHhhC------CeEEEEeCCCCCCccHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHH
Confidence 589999999999999999998872 3688889976543322 122211 134667889999999988887664
Q ss_pred -------ccEEeecCCCC
Q 012947 89 -------TKLLLNCVGPY 99 (452)
Q Consensus 89 -------~dvVIn~aGp~ 99 (452)
.|.|||++|..
T Consensus 75 ~~~~~~~id~li~~ag~~ 92 (180)
T smart00822 75 IPARLGPLRGVIHAAGVL 92 (180)
T ss_pred HHHHcCCeeEEEEccccC
Confidence 59999999864
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.31 E-value=1.6e-06 Score=84.88 Aligned_cols=86 Identities=21% Similarity=0.301 Sum_probs=67.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--C
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--Q 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--~ 88 (452)
|+|+|+|++|.+|+.+++.|. .+ .+|...+|.. +|++|++.+.++++ +
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~~-------~~v~a~~~~~----------------------~Ditd~~~v~~~i~~~~ 50 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-GE-------FEVIATDRAE----------------------LDITDPDAVLEVIRETR 50 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-CC-------ceEEeccCcc----------------------ccccChHHHHHHHHhhC
Confidence 459999999999999999997 32 6777776633 58999999999998 4
Q ss_pred ccEEeecCCCCCCC----------------CHHHHHHHHHhCCcEEEecCcHHH
Q 012947 89 TKLLLNCVGPYRLH----------------GDPVAAACVHSGCDYLDISGEPEF 126 (452)
Q Consensus 89 ~dvVIn~aGp~~~~----------------~~~vv~ac~~~g~~yvDlsge~~~ 126 (452)
.|+|||||...... ..+++++|.+.|..+|++|.+..|
T Consensus 51 PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhiSTDyVF 104 (281)
T COG1091 51 PDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGARLVHISTDYVF 104 (281)
T ss_pred CCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEEeecceEe
Confidence 69999999743321 167888888888888888865554
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.9e-06 Score=84.44 Aligned_cols=69 Identities=14% Similarity=0.138 Sum_probs=51.2
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCccEE
Q 012947 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKLL 92 (452)
Q Consensus 13 ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~dvV 92 (452)
|+|+|||||+|++++++|++.+ ++|.+..|+.++...... ....|+.+ +.+.+.+.++|+|
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~-----------~~~~~~~~-~~~~~~~~~~D~V 61 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDG-------HEVTILTRSPPAGANTKW-----------EGYKPWAP-LAESEALEGADAV 61 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcC-------CEEEEEeCCCCCCCcccc-----------eeeecccc-cchhhhcCCCCEE
Confidence 6899999999999999999988 899999998876532110 01123322 4456677899999
Q ss_pred eecCCCCC
Q 012947 93 LNCVGPYR 100 (452)
Q Consensus 93 In~aGp~~ 100 (452)
|||||...
T Consensus 62 vh~a~~~~ 69 (292)
T TIGR01777 62 INLAGEPI 69 (292)
T ss_pred EECCCCCc
Confidence 99998643
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=98.30 E-value=7.6e-07 Score=85.43 Aligned_cols=76 Identities=21% Similarity=0.286 Sum_probs=59.4
Q ss_pred cCC--chHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-------
Q 012947 17 GAS--GFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS------- 87 (452)
Q Consensus 17 GAT--G~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~------- 87 (452)
|++ +.||+.+++.|+++| ++|++.+|+.+++++..+++.. .....++.+|++|+++++++++
T Consensus 1 g~~~s~GiG~aia~~l~~~G-------a~V~~~~~~~~~~~~~~~~l~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~ 71 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEG-------ANVILTDRNEEKLADALEELAK--EYGAEVIQCDLSDEESVEALFDEAVERFG 71 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTT-------EEEEEEESSHHHHHHHHHHHHH--HTTSEEEESCTTSHHHHHHHHHHHHHHHC
T ss_pred CCCCCCChHHHHHHHHHHCC-------CEEEEEeCChHHHHHHHHHHHH--HcCCceEeecCcchHHHHHHHHHHHhhcC
Confidence 667 999999999999999 8999999999985444443321 1123479999999999988754
Q ss_pred -CccEEeecCCCCCC
Q 012947 88 -QTKLLLNCVGPYRL 101 (452)
Q Consensus 88 -~~dvVIn~aGp~~~ 101 (452)
+.|+||||+|....
T Consensus 72 g~iD~lV~~a~~~~~ 86 (241)
T PF13561_consen 72 GRIDILVNNAGISPP 86 (241)
T ss_dssp SSESEEEEEEESCTG
T ss_pred CCeEEEEeccccccc
Confidence 57999999986543
|
... |
| >PRK00048 dihydrodipicolinate reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.28 E-value=4e-06 Score=81.87 Aligned_cols=163 Identities=15% Similarity=0.060 Sum_probs=94.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEE-EEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v-~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
++|.|+|++|.+|+.+++.+.+... .++ .+++++.++.... . . .++...++++++++++
T Consensus 2 mkV~IiG~~G~mG~~i~~~l~~~~~------~elvav~d~~~~~~~~~-~--------~-----~~i~~~~dl~~ll~~~ 61 (257)
T PRK00048 2 IKVAVAGASGRMGRELIEAVEAAED------LELVAAVDRPGSPLVGQ-G--------A-----LGVAITDDLEAVLADA 61 (257)
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCC------CEEEEEEecCCcccccc-C--------C-----CCccccCCHHHhccCC
Confidence 6899999999999999998876531 454 4567776654322 1 1 1222234466677789
Q ss_pred cEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhhcCC
Q 012947 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWIP 169 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~~~~ 169 (452)
|+||+++.|... ..+++.|+++|+|.|-- ...|..+..+.+.+.+++.++.+.+...+...+....+-.+++.+..
T Consensus 62 DvVid~t~p~~~--~~~~~~al~~G~~vvig--ttG~s~~~~~~l~~aa~~~~v~~s~n~s~g~~~~~~l~~~aa~~l~~ 137 (257)
T PRK00048 62 DVLIDFTTPEAT--LENLEFALEHGKPLVIG--TTGFTEEQLAELEEAAKKIPVVIAPNFSIGVNLLMKLAEKAAKYLGD 137 (257)
T ss_pred CEEEECCCHHHH--HHHHHHHHHcCCCEEEE--CCCCCHHHHHHHHHHhcCCCEEEECcchHHHHHHHHHHHHHHHhcCC
Confidence 999999966443 68999999999997732 33334444455566444445555554444333322233344455532
Q ss_pred CCCcceEEEEEEeccCCc--cccccccHHHHHHhHhc
Q 012947 170 PAVPNQIEAYVSLESDKR--IVGNFGTYESAVLGVAN 204 (452)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~--~~g~~GT~~S~~~~~~~ 204 (452)
.+.+.+|.-. .-+. .| ||.-.+...+..
T Consensus 138 -~d~ei~E~HH---~~K~DaPS---GTA~~l~~~i~~ 167 (257)
T PRK00048 138 -YDIEIIEAHH---RHKVDAPS---GTALKLAEAIAE 167 (257)
T ss_pred -CCEEEEEccC---CCCCCCCC---HHHHHHHHHHHH
Confidence 3333333322 2222 22 777765555543
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=98.27 E-value=2.4e-06 Score=78.89 Aligned_cols=82 Identities=20% Similarity=0.255 Sum_probs=57.5
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh---hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP---TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~---~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
.++|+|++|.+|+.++++|++++. .++++.+|+. .+.++..+++.. ...++.++.+|++|++++.+++++
T Consensus 2 tylitGG~gglg~~la~~La~~~~------~~~il~~r~~~~~~~~~~~i~~l~~-~g~~v~~~~~Dv~d~~~v~~~~~~ 74 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGA------RRLILLGRSGAPSAEAEAAIRELES-AGARVEYVQCDVTDPEAVAAALAQ 74 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-------SEEEEEESSGGGSTTHHHHHHHHHH-TT-EEEEEE--TTSHHHHHHHHHT
T ss_pred EEEEECCccHHHHHHHHHHHHcCC------CEEEEeccCCCccHHHHHHHHHHHh-CCCceeeeccCccCHHHHHHHHHH
Confidence 479999999999999999999983 6899999992 223334444431 245788999999999999999874
Q ss_pred -------ccEEeecCCCCC
Q 012947 89 -------TKLLLNCVGPYR 100 (452)
Q Consensus 89 -------~dvVIn~aGp~~ 100 (452)
++.|||++|...
T Consensus 75 ~~~~~~~i~gVih~ag~~~ 93 (181)
T PF08659_consen 75 LRQRFGPIDGVIHAAGVLA 93 (181)
T ss_dssp SHTTSS-EEEEEE------
T ss_pred HHhccCCcceeeeeeeeec
Confidence 478999998643
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=98.25 E-value=2.8e-06 Score=82.73 Aligned_cols=96 Identities=11% Similarity=0.214 Sum_probs=77.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--C
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--Q 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--~ 88 (452)
++|+|+||||. |+.+++.|.+.+ ++|.+..|+....+.+.+ .....+..+..|.+++.+.++ +
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g-------~~v~~s~~t~~~~~~~~~-------~g~~~v~~g~l~~~~l~~~l~~~~ 65 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQG-------IEILVTVTTSEGKHLYPI-------HQALTVHTGALDPQELREFLKRHS 65 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCC-------CeEEEEEccCCccccccc-------cCCceEEECCCCHHHHHHHHHhcC
Confidence 47999999999 999999999988 799999998876543322 122345566778888988887 4
Q ss_pred ccEEeecCCCCCC-CCHHHHHHHHHhCCcEEEec
Q 012947 89 TKLLLNCVGPYRL-HGDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 89 ~dvVIn~aGp~~~-~~~~vv~ac~~~g~~yvDls 121 (452)
+|+||+++.||.. -..++.++|.+.|+.|+.+.
T Consensus 66 i~~VIDAtHPfA~~is~~a~~a~~~~~ipylR~e 99 (256)
T TIGR00715 66 IDILVDATHPFAAQITTNATAVCKELGIPYVRFE 99 (256)
T ss_pred CCEEEEcCCHHHHHHHHHHHHHHHHhCCcEEEEE
Confidence 8999999999874 35789999999999999884
|
This enzyme was found to be a monomer by gel filtration. |
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.23 E-value=5.4e-06 Score=74.00 Aligned_cols=119 Identities=17% Similarity=0.149 Sum_probs=83.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
+..+++|+|+ |.+|+.+++.|.+.+. .++.+.+|+.++.+++.+++.. . .+..+..+. .+++++
T Consensus 18 ~~~~i~iiG~-G~~g~~~a~~l~~~g~------~~v~v~~r~~~~~~~~~~~~~~----~--~~~~~~~~~---~~~~~~ 81 (155)
T cd01065 18 KGKKVLILGA-GGAARAVAYALAELGA------AKIVIVNRTLEKAKALAERFGE----L--GIAIAYLDL---EELLAE 81 (155)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCC------CEEEEEcCCHHHHHHHHHHHhh----c--ccceeecch---hhcccc
Confidence 3468999998 8999999999998751 6899999999998888776631 1 122334343 344789
Q ss_pred ccEEeecCCCCCC--CCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcC
Q 012947 89 TKLLLNCVGPYRL--HGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSA 148 (452)
Q Consensus 89 ~dvVIn~aGp~~~--~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~ 148 (452)
+|+||+|+++... ....+...+++.+...+|++..+... .+.+.+++.|+.++++
T Consensus 82 ~Dvvi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~~~~~-----~l~~~~~~~g~~~v~g 138 (155)
T cd01065 82 ADLIINTTPVGMKPGDELPLPPSLLKPGGVVYDVVYNPLET-----PLLKEARALGAKTIDG 138 (155)
T ss_pred CCEEEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCcCCCCC-----HHHHHHHHCCCceeCC
Confidence 9999999976543 22333455677888899998765432 3345667778776654
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=98.23 E-value=2.6e-06 Score=84.24 Aligned_cols=58 Identities=14% Similarity=0.188 Sum_probs=46.7
Q ss_pred EEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--CccE
Q 012947 14 IILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--QTKL 91 (452)
Q Consensus 14 lV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--~~dv 91 (452)
+|+|||||+|+.++++|++.+ .+++++.+. ..+|+.|.++++++++ ++|+
T Consensus 1 lItGa~GfiG~~l~~~L~~~g-------~~v~~~~~~---------------------~~~Dl~~~~~l~~~~~~~~~d~ 52 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALG-------FTNLVLRTH---------------------KELDLTRQADVEAFFAKEKPTY 52 (306)
T ss_pred CcccCCCcccHHHHHHHHhCC-------CcEEEeecc---------------------ccCCCCCHHHHHHHHhccCCCE
Confidence 589999999999999999987 555544321 1368999999999887 4799
Q ss_pred EeecCCCC
Q 012947 92 LLNCVGPY 99 (452)
Q Consensus 92 VIn~aGp~ 99 (452)
|||||++.
T Consensus 53 Vih~A~~~ 60 (306)
T PLN02725 53 VILAAAKV 60 (306)
T ss_pred EEEeeeee
Confidence 99999864
|
|
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=98.20 E-value=5.8e-06 Score=83.45 Aligned_cols=138 Identities=14% Similarity=0.054 Sum_probs=81.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~--~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
++++|+|+||+|++|+.++..|+..+-.+.....++++.+|++ ++++....++. +.. .....|+....++.+.+
T Consensus 1 ~~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~---d~~-~~~~~~~~~~~~~~~~l 76 (325)
T cd01336 1 EPIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQ---DCA-FPLLKSVVATTDPEEAF 76 (325)
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehh---hcc-ccccCCceecCCHHHHh
Confidence 3689999999999999999999986521000114899999965 33433222221 000 01122444456678889
Q ss_pred cCccEEeecCCCCCCCCH---HHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHH
Q 012947 87 SQTKLLLNCVGPYRLHGD---PVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFN 163 (452)
Q Consensus 87 ~~~dvVIn~aGp~~~~~~---~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~ 163 (452)
+++|+|||+||.....++ .+++.. ...++.+.....+.+...++.|+.+ -|-|+.++.+
T Consensus 77 ~~aDiVI~tAG~~~~~~~~R~~l~~~N-------------~~i~~~i~~~i~~~~~~~~iiivvs-----NPvD~~t~~~ 138 (325)
T cd01336 77 KDVDVAILVGAMPRKEGMERKDLLKAN-------------VKIFKEQGEALDKYAKKNVKVLVVG-----NPANTNALIL 138 (325)
T ss_pred CCCCEEEEeCCcCCCCCCCHHHHHHHH-------------HHHHHHHHHHHHHhCCCCeEEEEec-----CcHHHHHHHH
Confidence 999999999997544331 222211 2233444444444333244444433 4889999998
Q ss_pred hhhcC
Q 012947 164 SRQWI 168 (452)
Q Consensus 164 ~~~~~ 168 (452)
.+...
T Consensus 139 ~k~~~ 143 (325)
T cd01336 139 LKYAP 143 (325)
T ss_pred HHHcC
Confidence 88863
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.11 E-value=2.4e-05 Score=70.64 Aligned_cols=107 Identities=18% Similarity=0.121 Sum_probs=81.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~-- 88 (452)
..|+++||.-+||+.++..|++.| .+|+...|+++.+..+.++. +..+..+.+|+++.+.+.+.+..
T Consensus 8 ~~vlvTgagaGIG~~~v~~La~aG-------A~ViAvaR~~a~L~sLV~e~----p~~I~Pi~~Dls~wea~~~~l~~v~ 76 (245)
T KOG1207|consen 8 VIVLVTGAGAGIGKEIVLSLAKAG-------AQVIAVARNEANLLSLVKET----PSLIIPIVGDLSAWEALFKLLVPVF 76 (245)
T ss_pred eEEEeecccccccHHHHHHHHhcC-------CEEEEEecCHHHHHHHHhhC----CcceeeeEecccHHHHHHHhhcccC
Confidence 569999999999999999999999 89999999999999998874 34588899999999988888764
Q ss_pred -ccEEeecCCCCCCCCHHHHHHHHHh--CCcEEEecCcHHHHHHH
Q 012947 89 -TKLLLNCVGPYRLHGDPVAAACVHS--GCDYLDISGEPEFMERM 130 (452)
Q Consensus 89 -~dvVIn~aGp~~~~~~~vv~ac~~~--g~~yvDlsge~~~~~~~ 130 (452)
.|.++|+||.-..+ ++.+...+. ..--|++-+.....+..
T Consensus 77 pidgLVNNAgvA~~~--pf~eiT~q~fDr~F~VNvravi~v~Q~v 119 (245)
T KOG1207|consen 77 PIDGLVNNAGVATNH--PFGEITQQSFDRTFAVNVRAVILVAQLV 119 (245)
T ss_pred chhhhhccchhhhcc--hHHHHhHHhhcceeeeeeeeeeeHHHHH
Confidence 69999999965433 333333332 22345555555544443
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=98.09 E-value=1.2e-05 Score=77.84 Aligned_cols=80 Identities=16% Similarity=0.249 Sum_probs=59.8
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 8 ~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
....+|+|+||.||||+++|+.|..++ ..|++++---.+-+..++-+- ...+.+++.-|+..+ ++.
T Consensus 25 ~~~lrI~itGgaGFIgSHLvdkLm~eg-------h~VIa~Dn~ftg~k~n~~~~~--~~~~fel~~hdv~~p-----l~~ 90 (350)
T KOG1429|consen 25 SQNLRILITGGAGFIGSHLVDKLMTEG-------HEVIALDNYFTGRKENLEHWI--GHPNFELIRHDVVEP-----LLK 90 (350)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHhcC-------CeEEEEecccccchhhcchhc--cCcceeEEEeechhH-----HHH
Confidence 346899999999999999999999998 788888875444333333221 245678888887654 778
Q ss_pred CccEEeecCCCCCC
Q 012947 88 QTKLLLNCVGPYRL 101 (452)
Q Consensus 88 ~~dvVIn~aGp~~~ 101 (452)
.+|-|+|.|.|...
T Consensus 91 evD~IyhLAapasp 104 (350)
T KOG1429|consen 91 EVDQIYHLAAPASP 104 (350)
T ss_pred HhhhhhhhccCCCC
Confidence 88999999877543
|
|
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.07 E-value=8.7e-06 Score=79.99 Aligned_cols=83 Identities=16% Similarity=0.178 Sum_probs=70.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHcC-
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCSQ- 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~-~~~~~v~~v~~Dl~d~~sl~~~~~~- 88 (452)
..|+|+|++..+|..++..+..+| .+|.+..|+.+|++++.++++. ....++.+..+|+.|-+++..++++
T Consensus 34 ~hi~itggS~glgl~la~e~~~~g-------a~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l 106 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREG-------ADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEEL 106 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHcc-------CceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhh
Confidence 479999999999999999999999 7999999999999999988864 1112355888999999999988875
Q ss_pred ------ccEEeecCCCCC
Q 012947 89 ------TKLLLNCVGPYR 100 (452)
Q Consensus 89 ------~dvVIn~aGp~~ 100 (452)
.|.+|||||...
T Consensus 107 ~~~~~~~d~l~~cAG~~v 124 (331)
T KOG1210|consen 107 RDLEGPIDNLFCCAGVAV 124 (331)
T ss_pred hhccCCcceEEEecCccc
Confidence 489999999643
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=97.98 E-value=4.5e-05 Score=76.97 Aligned_cols=81 Identities=17% Similarity=0.343 Sum_probs=61.1
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh------HHHHHHHHhCC---CCCCCccEEEEeCC-----
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT------RVKQALQWASP---SHSLSIPILTADTT----- 77 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~------kl~~l~~~l~~---~~~~~v~~v~~Dl~----- 77 (452)
++++||||||+|++++++|+..-+ .+|.+..|-.+ ++++....... ....++.++.+|+.
T Consensus 2 ~vlLTGATGFLG~yLl~eLL~~~~------~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lG 75 (382)
T COG3320 2 NVLLTGATGFLGAYLLLELLDRSD------AKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLG 75 (382)
T ss_pred eEEEecCchHhHHHHHHHHHhcCC------CcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCC
Confidence 689999999999999999998763 68999988433 33333331110 12468899999998
Q ss_pred -CHHHHHHHHcCccEEeecCCC
Q 012947 78 -DPPSLHRLCSQTKLLLNCVGP 98 (452)
Q Consensus 78 -d~~sl~~~~~~~dvVIn~aGp 98 (452)
+....+++.+.+|.|||++.-
T Consensus 76 L~~~~~~~La~~vD~I~H~gA~ 97 (382)
T COG3320 76 LSERTWQELAENVDLIIHNAAL 97 (382)
T ss_pred CCHHHHHHHhhhcceEEecchh
Confidence 457788999999999999863
|
|
| >PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate | Back alignment and domain information |
|---|
Probab=97.98 E-value=1.8e-05 Score=68.13 Aligned_cols=99 Identities=22% Similarity=0.330 Sum_probs=63.5
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEE-EEEecChhHHHHHHHHhCCCCCCCc-cEEEEeCCCHHHHHHHHcCc
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSI-PILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v-~iagR~~~kl~~l~~~l~~~~~~~v-~~v~~Dl~d~~sl~~~~~~~ 89 (452)
+|.|+||||++|+.+++.|.++.+ +++ .+.+|+.+.-+.+..... ..... ....-| .+.+.+ .++
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~------~e~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~-~~~~~~----~~~ 67 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPD------FELVALVSSSRSAGKPLSEVFP--HPKGFEDLSVED-ADPEEL----SDV 67 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTST------EEEEEEEESTTTTTSBHHHTTG--GGTTTEEEBEEE-TSGHHH----TTE
T ss_pred CEEEECCCCHHHHHHHHHHhcCCC------ccEEEeeeeccccCCeeehhcc--ccccccceeEee-cchhHh----hcC
Confidence 589999999999999999999653 664 445555523322222211 00112 222223 343433 889
Q ss_pred cEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHH
Q 012947 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPE 125 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~ 125 (452)
|+||.|.+.. ....++...++.|+..||+++...
T Consensus 68 Dvvf~a~~~~--~~~~~~~~~~~~g~~ViD~s~~~R 101 (121)
T PF01118_consen 68 DVVFLALPHG--ASKELAPKLLKAGIKVIDLSGDFR 101 (121)
T ss_dssp SEEEE-SCHH--HHHHHHHHHHHTTSEEEESSSTTT
T ss_pred CEEEecCchh--HHHHHHHHHhhCCcEEEeCCHHHh
Confidence 9999998532 236788888999999999998753
|
This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C .... |
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=97.97 E-value=3.3e-05 Score=85.50 Aligned_cols=59 Identities=17% Similarity=0.193 Sum_probs=45.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
..++|+||||+||+|++++++|.+++ ++|.+. ..|++|.+.+.+.++
T Consensus 379 ~~mkiLVtGa~G~iG~~l~~~L~~~g-------~~v~~~-------------------------~~~l~d~~~v~~~i~~ 426 (668)
T PLN02260 379 PSLKFLIYGRTGWIGGLLGKLCEKQG-------IAYEYG-------------------------KGRLEDRSSLLADIRN 426 (668)
T ss_pred CCceEEEECCCchHHHHHHHHHHhCC-------CeEEee-------------------------ccccccHHHHHHHHHh
Confidence 45789999999999999999999887 565211 124667777877776
Q ss_pred -CccEEeecCCCC
Q 012947 88 -QTKLLLNCVGPY 99 (452)
Q Consensus 88 -~~dvVIn~aGp~ 99 (452)
++|+|||||+..
T Consensus 427 ~~pd~Vih~Aa~~ 439 (668)
T PLN02260 427 VKPTHVFNAAGVT 439 (668)
T ss_pred hCCCEEEECCccc
Confidence 689999999853
|
|
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.97 E-value=2.1e-05 Score=70.82 Aligned_cols=80 Identities=18% Similarity=0.154 Sum_probs=71.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
+..-.+|+|+.+.+|+..++.|+++| ..+++++-..+|-++..++++ .++.+..+|+++++++..++.
T Consensus 8 kglvalvtggasglg~ataerlakqg-------asv~lldlp~skg~~vakelg----~~~vf~padvtsekdv~aala~ 76 (260)
T KOG1199|consen 8 KGLVALVTGGASGLGKATAERLAKQG-------ASVALLDLPQSKGADVAKELG----GKVVFTPADVTSEKDVRAALAK 76 (260)
T ss_pred cCeeEEeecCcccccHHHHHHHHhcC-------ceEEEEeCCcccchHHHHHhC----CceEEeccccCcHHHHHHHHHH
Confidence 45668999999999999999999999 799999999999889999885 688899999999999988876
Q ss_pred ------CccEEeecCCCC
Q 012947 88 ------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (452)
+.|+.+||+|.-
T Consensus 77 ak~kfgrld~~vncagia 94 (260)
T KOG1199|consen 77 AKAKFGRLDALVNCAGIA 94 (260)
T ss_pred HHhhccceeeeeecccee
Confidence 569999999963
|
|
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.96 E-value=1.5e-05 Score=79.03 Aligned_cols=134 Identities=20% Similarity=0.165 Sum_probs=86.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
+..+++|+|+ |++|++++..|+..+- .++.+.+|+.+|.+++.+++... ...+.+ ... +++.+.+.+
T Consensus 126 ~~k~vlIlGa-GGaaraia~aL~~~G~------~~I~I~nR~~~ka~~la~~l~~~-~~~~~~--~~~---~~~~~~~~~ 192 (284)
T PRK12549 126 SLERVVQLGA-GGAGAAVAHALLTLGV------ERLTIFDVDPARAAALADELNAR-FPAARA--TAG---SDLAAALAA 192 (284)
T ss_pred cCCEEEEECC-cHHHHHHHHHHHHcCC------CEEEEECCCHHHHHHHHHHHHhh-CCCeEE--Eec---cchHhhhCC
Confidence 3468999998 7799999999999882 48999999999999998877420 111122 222 234556788
Q ss_pred ccEEeec--CCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhh
Q 012947 89 TKLLLNC--VGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQ 166 (452)
Q Consensus 89 ~dvVIn~--aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~ 166 (452)
+|+|||| +|.......++-...+..+.-.+|+...+.-+. +-+.|++.|..++++. +|..+.+...
T Consensus 193 aDiVInaTp~Gm~~~~~~~~~~~~l~~~~~v~DivY~P~~T~-----ll~~A~~~G~~~~~G~-------~ML~~Qa~~~ 260 (284)
T PRK12549 193 ADGLVHATPTGMAKHPGLPLPAELLRPGLWVADIVYFPLETE-----LLRAARALGCRTLDGG-------GMAVFQAVDA 260 (284)
T ss_pred CCEEEECCcCCCCCCCCCCCCHHHcCCCcEEEEeeeCCCCCH-----HHHHHHHCCCeEecCH-------HHHHHHHHHH
Confidence 9999999 553322112332333444556788887554322 2356788898887653 4556555555
Q ss_pred c
Q 012947 167 W 167 (452)
Q Consensus 167 ~ 167 (452)
+
T Consensus 261 f 261 (284)
T PRK12549 261 F 261 (284)
T ss_pred H
Confidence 4
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.95 E-value=8.9e-06 Score=78.65 Aligned_cols=65 Identities=18% Similarity=0.290 Sum_probs=49.3
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-CccE
Q 012947 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-QTKL 91 (452)
Q Consensus 13 ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-~~dv 91 (452)
|+|+||||+||++++..|.+.+ ++|.+..|+..+.+.... ..+. .-+.+..... ++|+
T Consensus 1 IliTGgTGlIG~~L~~~L~~~g-------h~v~iltR~~~~~~~~~~-------~~v~-------~~~~~~~~~~~~~Da 59 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGG-------HQVTILTRRPPKASQNLH-------PNVT-------LWEGLADALTLGIDA 59 (297)
T ss_pred CeEeccccchhHHHHHHHHhCC-------CeEEEEEcCCcchhhhcC-------cccc-------ccchhhhcccCCCCE
Confidence 6899999999999999999998 799999999988754321 1111 1233444444 7999
Q ss_pred EeecCCC
Q 012947 92 LLNCVGP 98 (452)
Q Consensus 92 VIn~aGp 98 (452)
|||.||-
T Consensus 60 vINLAG~ 66 (297)
T COG1090 60 VINLAGE 66 (297)
T ss_pred EEECCCC
Confidence 9999994
|
|
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=97.93 E-value=5.4e-05 Score=66.58 Aligned_cols=75 Identities=17% Similarity=0.247 Sum_probs=59.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
+..+++|+|| |.+|+.++.+|...+. -++.+++|+.++++++.+.+. ...+-..+++ ++.+.+.+
T Consensus 11 ~~~~vlviGa-Gg~ar~v~~~L~~~g~------~~i~i~nRt~~ra~~l~~~~~-----~~~~~~~~~~---~~~~~~~~ 75 (135)
T PF01488_consen 11 KGKRVLVIGA-GGAARAVAAALAALGA------KEITIVNRTPERAEALAEEFG-----GVNIEAIPLE---DLEEALQE 75 (135)
T ss_dssp TTSEEEEESS-SHHHHHHHHHHHHTTS------SEEEEEESSHHHHHHHHHHHT-----GCSEEEEEGG---GHCHHHHT
T ss_pred CCCEEEEECC-HHHHHHHHHHHHHcCC------CEEEEEECCHHHHHHHHHHcC-----ccccceeeHH---HHHHHHhh
Confidence 4578999998 7899999999999983 469999999999999999873 2233444443 45678889
Q ss_pred ccEEeecCCC
Q 012947 89 TKLLLNCVGP 98 (452)
Q Consensus 89 ~dvVIn~aGp 98 (452)
+|+||||.+.
T Consensus 76 ~DivI~aT~~ 85 (135)
T PF01488_consen 76 ADIVINATPS 85 (135)
T ss_dssp ESEEEE-SST
T ss_pred CCeEEEecCC
Confidence 9999999753
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.92 E-value=4.4e-05 Score=72.82 Aligned_cols=99 Identities=16% Similarity=0.125 Sum_probs=78.2
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC--C-CCCCccEEEEeCCCHHHHHHHHc-
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--S-HSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~--~-~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
-++|+|+++++|-.+|.+|++..+++ ..+++.++.|+.+|.+++...+.. + ...+++++.+|++|-.++.++.+
T Consensus 5 valITGanSglGl~i~~RLl~~~De~--~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d 82 (341)
T KOG1478|consen 5 VALITGANSGLGLAICKRLLAEDDEN--VRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD 82 (341)
T ss_pred EEEEecCCCcccHHHHHHHHhccCCc--eeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence 48999999999999999999986433 237889999999999998887754 1 12467899999999988877765
Q ss_pred ------CccEEeecCCCCCCCCHHHHHHHHH
Q 012947 88 ------QTKLLLNCVGPYRLHGDPVAAACVH 112 (452)
Q Consensus 88 ------~~dvVIn~aGp~~~~~~~vv~ac~~ 112 (452)
+.|.|.-+||.....+.+...+...
T Consensus 83 i~~rf~~ld~iylNAg~~~~~gi~w~~avf~ 113 (341)
T KOG1478|consen 83 IKQRFQRLDYIYLNAGIMPNPGINWKAAVFG 113 (341)
T ss_pred HHHHhhhccEEEEccccCCCCcccHHHHHHH
Confidence 5799999999877766555555443
|
|
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.89 E-value=4.4e-05 Score=75.44 Aligned_cols=130 Identities=16% Similarity=0.140 Sum_probs=87.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+++|+|+ |.+|+.++..|...+. .+|.+++|+.++++++.+++.. ...+. .+. ++.+.+.++
T Consensus 123 ~k~vlVlGa-Gg~a~ai~~aL~~~g~------~~V~v~~R~~~~a~~l~~~~~~--~~~~~---~~~----~~~~~~~~~ 186 (278)
T PRK00258 123 GKRILILGA-GGAARAVILPLLDLGV------AEITIVNRTVERAEELAKLFGA--LGKAE---LDL----ELQEELADF 186 (278)
T ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCC------CEEEEEeCCHHHHHHHHHHhhh--cccee---ecc----cchhccccC
Confidence 457999997 9999999999998873 5899999999999988887641 11111 121 234566789
Q ss_pred cEEeecCCCCCCC---CHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhh
Q 012947 90 KLLLNCVGPYRLH---GDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQ 166 (452)
Q Consensus 90 dvVIn~aGp~~~~---~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~ 166 (452)
|+|||+....... ..++...++..+...+|+...+.-+ .+-+.|++.|+.++++. +|..+.+...
T Consensus 187 DivInaTp~g~~~~~~~~~~~~~~l~~~~~v~DivY~P~~T-----~ll~~A~~~G~~~~~G~-------~Ml~~Qa~~~ 254 (278)
T PRK00258 187 DLIINATSAGMSGELPLPPLPLSLLRPGTIVYDMIYGPLPT-----PFLAWAKAQGARTIDGL-------GMLVHQAAEA 254 (278)
T ss_pred CEEEECCcCCCCCCCCCCCCCHHHcCCCCEEEEeecCCCCC-----HHHHHHHHCcCeecCCH-------HHHHHHHHHH
Confidence 9999997432211 1234445666777899998755432 23466888898877553 4566555555
Q ss_pred c
Q 012947 167 W 167 (452)
Q Consensus 167 ~ 167 (452)
+
T Consensus 255 f 255 (278)
T PRK00258 255 F 255 (278)
T ss_pred H
Confidence 4
|
|
| >PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase | Back alignment and domain information |
|---|
Probab=97.85 E-value=1.7e-05 Score=81.66 Aligned_cols=101 Identities=17% Similarity=0.165 Sum_probs=66.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH-HHc
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHR-LCS 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~-~~~ 87 (452)
+.++|.|+||||++|+.+++.|.++.. .++..+.++.++.+.+.+.. ..+...|+.+.++++. .++
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~hP~------~el~~l~s~~saG~~i~~~~-------~~l~~~~~~~~~~~~~~~~~ 103 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANHPD------FEITVMTADRKAGQSFGSVF-------PHLITQDLPNLVAVKDADFS 103 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhCCC------CeEEEEEChhhcCCCchhhC-------ccccCccccceecCCHHHhc
Confidence 567999999999999999999999842 78888887655433222211 1111123322222222 247
Q ss_pred CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHH
Q 012947 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPE 125 (452)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~ 125 (452)
++|+|+.+.+.- ....++.+. +.|+..||+++...
T Consensus 104 ~~DvVf~Alp~~--~s~~i~~~~-~~g~~VIDlSs~fR 138 (381)
T PLN02968 104 DVDAVFCCLPHG--TTQEIIKAL-PKDLKIVDLSADFR 138 (381)
T ss_pred CCCEEEEcCCHH--HHHHHHHHH-hCCCEEEEcCchhc
Confidence 899999988532 235667664 67889999998653
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=97.84 E-value=3.9e-05 Score=94.77 Aligned_cols=84 Identities=20% Similarity=0.133 Sum_probs=62.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh--------------h-----------------------
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--------------T----------------------- 52 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~--------------~----------------------- 52 (452)
...+||+||+++||..++++|++++. .++++++|+. .
T Consensus 1997 g~vvLVTGGarGIG~aiA~~LA~~~g------a~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~ 2070 (2582)
T TIGR02813 1997 DDVFLVTGGAKGVTFECALELAKQCQ------AHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVD 2070 (2582)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHhcC------CEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhh
Confidence 35799999999999999999999852 7999999982 0
Q ss_pred ----------HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc------CccEEeecCCCCC
Q 012947 53 ----------RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS------QTKLLLNCVGPYR 100 (452)
Q Consensus 53 ----------kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~------~~dvVIn~aGp~~ 100 (452)
.+++.++++.. ...++.++.+|++|.++++++++ +.|+|||+||...
T Consensus 2071 ~~~~~~~~~~ei~~~la~l~~-~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~ 2133 (2582)
T TIGR02813 2071 ALVRPVLSSLEIAQALAAFKA-AGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLA 2133 (2582)
T ss_pred hcccccchhHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCC
Confidence 11111222211 23467788999999999988876 4799999999754
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >PRK14027 quinate/shikimate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.83 E-value=9e-05 Score=73.39 Aligned_cols=124 Identities=15% Similarity=0.115 Sum_probs=79.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+++|+|| |+.+++++-.|++.+. .++.++.|+.+|.+++.+.+... .....+... +...+.....++
T Consensus 127 ~k~vlilGa-GGaarAi~~aL~~~g~------~~i~i~nR~~~ka~~La~~~~~~-~~~~~~~~~---~~~~~~~~~~~~ 195 (283)
T PRK14027 127 LDSVVQVGA-GGVGNAVAYALVTHGV------QKLQVADLDTSRAQALADVINNA-VGREAVVGV---DARGIEDVIAAA 195 (283)
T ss_pred CCeEEEECC-cHHHHHHHHHHHHCCC------CEEEEEcCCHHHHHHHHHHHhhc-cCcceEEec---CHhHHHHHHhhc
Confidence 457999998 8889999999999883 58999999999999988876310 011111222 223344455679
Q ss_pred cEEeecCCCCCC--CCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCC
Q 012947 90 KLLLNCVGPYRL--HGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSAC 149 (452)
Q Consensus 90 dvVIn~aGp~~~--~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~ 149 (452)
|+|||+...... ...++....+......+|+...+.-+. +-..|++.|..++++.
T Consensus 196 divINaTp~Gm~~~~~~~~~~~~l~~~~~v~D~vY~P~~T~-----ll~~A~~~G~~~~~Gl 252 (283)
T PRK14027 196 DGVVNATPMGMPAHPGTAFDVSCLTKDHWVGDVVYMPIETE-----LLKAARALGCETLDGT 252 (283)
T ss_pred CEEEEcCCCCCCCCCCCCCCHHHcCCCcEEEEcccCCCCCH-----HHHHHHHCCCEEEccH
Confidence 999999632211 112332333444555788877654322 2356778888887654
|
|
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=97.83 E-value=6.6e-05 Score=73.81 Aligned_cols=129 Identities=17% Similarity=0.151 Sum_probs=85.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+++|+|+ |.+|+.++..|++.+ .++.+.+|+.++++++.+++.. ... ....+..+ ....++
T Consensus 117 ~k~vliiGa-Gg~g~aia~~L~~~g-------~~v~v~~R~~~~~~~la~~~~~--~~~--~~~~~~~~-----~~~~~~ 179 (270)
T TIGR00507 117 NQRVLIIGA-GGAARAVALPLLKAD-------CNVIIANRTVSKAEELAERFQR--YGE--IQAFSMDE-----LPLHRV 179 (270)
T ss_pred CCEEEEEcC-cHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHhh--cCc--eEEechhh-----hcccCc
Confidence 457999998 799999999999887 7899999999999888887641 111 12222211 123579
Q ss_pred cEEeecCCCCCCC---CHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhh
Q 012947 90 KLLLNCVGPYRLH---GDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQ 166 (452)
Q Consensus 90 dvVIn~aGp~~~~---~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~ 166 (452)
|+||||.+..... ..++.......+...+|++..+.-+ .+.+.|++.|+.++.+. +|..+-+...
T Consensus 180 DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~p~~T-----~ll~~A~~~G~~~vdG~-------~Ml~~Qa~~~ 247 (270)
T TIGR00507 180 DLIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYNPGET-----PFLAEAKSLGTKTIDGL-------GMLVAQAALA 247 (270)
T ss_pred cEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccCCCCC-----HHHHHHHHCCCeeeCCH-------HHHHHHHHHH
Confidence 9999998643211 1123234455677899998876543 24567888898887653 4555555444
Q ss_pred c
Q 012947 167 W 167 (452)
Q Consensus 167 ~ 167 (452)
+
T Consensus 248 f 248 (270)
T TIGR00507 248 F 248 (270)
T ss_pred H
Confidence 4
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.00015 Score=71.92 Aligned_cols=122 Identities=17% Similarity=0.110 Sum_probs=79.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+++|+|| |.++++++..|++.|. .++.|+.|+.+|.+++.+++.. ...+.. +...+++...+.++
T Consensus 125 ~k~vlvlGa-GGaarai~~aL~~~G~------~~i~I~nRt~~ka~~La~~~~~----~~~~~~--~~~~~~~~~~~~~~ 191 (282)
T TIGR01809 125 GFRGLVIGA-GGTSRAAVYALASLGV------TDITVINRNPDKLSRLVDLGVQ----VGVITR--LEGDSGGLAIEKAA 191 (282)
T ss_pred CceEEEEcC-cHHHHHHHHHHHHcCC------CeEEEEeCCHHHHHHHHHHhhh----cCccee--ccchhhhhhcccCC
Confidence 467999998 8899999999999883 4799999999999999887631 111211 22224455666789
Q ss_pred cEEeecCCCCCCCCHHHHHHHH--------HhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCC
Q 012947 90 KLLLNCVGPYRLHGDPVAAACV--------HSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSAC 149 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~--------~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~ 149 (452)
|+||||...........+..+. ......+|+...+.-+ .+-..|++.|..++++.
T Consensus 192 DiVInaTp~g~~~~~~~l~~~~~~~~~~~~~~~~~v~D~vY~P~~T-----~ll~~A~~~G~~~~~Gl 254 (282)
T TIGR01809 192 EVLVSTVPADVPADYVDLFATVPFLLLKRKSSEGIFLDAAYDPWPT-----PLVAIVSAAGWRVISGL 254 (282)
T ss_pred CEEEECCCCCCCCCHHHhhhhhhhhccccCCCCcEEEEEeeCCCCC-----HHHHHHHHCCCEEECcH
Confidence 9999997543222222222111 1244578887654332 22356777888887654
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.00025 Score=71.55 Aligned_cols=138 Identities=14% Similarity=0.045 Sum_probs=79.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~--~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
.+|.|+||+|.+|..++..|+..+-.......++.+.++++ ++++..+.++.......... ..+. ....+.+++
T Consensus 1 ~KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~~--~~i~--~~~~~~~~~ 76 (323)
T cd00704 1 LHVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKG--VVIT--TDPEEAFKD 76 (323)
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccCC--cEEe--cChHHHhCC
Confidence 47999999999999999999876521100114699999987 65544433332100000000 0111 235788999
Q ss_pred ccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhhc
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQW 167 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~~ 167 (452)
+|+||++||.-...++.=.+... .....++.+.....+.+...++.|+. +-|-|+.++.+.+..
T Consensus 77 aDiVVitAG~~~~~g~tR~dll~----------~N~~i~~~i~~~i~~~~~~~~iiivv-----sNPvD~~t~~~~k~s 140 (323)
T cd00704 77 VDVAILVGAFPRKPGMERADLLR----------KNAKIFKEQGEALNKVAKPTVKVLVV-----GNPANTNALIALKNA 140 (323)
T ss_pred CCEEEEeCCCCCCcCCcHHHHHH----------HhHHHHHHHHHHHHHhCCCCeEEEEe-----CCcHHHHHHHHHHHc
Confidence 99999999965544422111111 11234455544444443234444442 378899999887765
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.80 E-value=8.6e-05 Score=75.08 Aligned_cols=119 Identities=14% Similarity=0.120 Sum_probs=78.2
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHc-CCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 9 ELFDVIILGASGFTGKYVVREALKL-FNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~-g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
+..+|+|+||+|++|+.++++|+.+ ++ .++.+.+|+.+++.++.+++. ..|+ .++.+.+.
T Consensus 154 ~~k~VLVtGAtG~IGs~lar~L~~~~gv------~~lilv~R~~~rl~~La~el~----------~~~i---~~l~~~l~ 214 (340)
T PRK14982 154 SKATVAVVGATGDIGSAVCRWLDAKTGV------AELLLVARQQERLQELQAELG----------GGKI---LSLEEALP 214 (340)
T ss_pred CCCEEEEEccChHHHHHHHHHHHhhCCC------CEEEEEcCCHHHHHHHHHHhc----------cccH---HhHHHHHc
Confidence 3468999999999999999999864 43 589999999999988777652 1222 24678889
Q ss_pred CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhh
Q 012947 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAE 157 (452)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~d 157 (452)
++|+|||+++..... .+-..-+..+.-.||+.-....-... .+ .++.++.+ |.-..|.|
T Consensus 215 ~aDiVv~~ts~~~~~--~I~~~~l~~~~~viDiAvPRDVd~~v-------~~-~~V~v~~g-G~V~~p~~ 273 (340)
T PRK14982 215 EADIVVWVASMPKGV--EIDPETLKKPCLMIDGGYPKNLDTKV-------QG-PGIHVLKG-GIVEHSLD 273 (340)
T ss_pred cCCEEEECCcCCcCC--cCCHHHhCCCeEEEEecCCCCCCccc-------CC-CCEEEEeC-CccccCCC
Confidence 999999999853221 01111224556688887654432221 12 56766654 34444544
|
|
| >COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.78 E-value=7.1e-05 Score=73.84 Aligned_cols=132 Identities=22% Similarity=0.233 Sum_probs=86.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+++|+|| |+.+++++-.|++.|. .++.|+.|+.++.+++.+.+.. ....+...+..+.+.+. +.
T Consensus 126 ~~~vlilGA-GGAarAv~~aL~~~g~------~~i~V~NRt~~ra~~La~~~~~---~~~~~~~~~~~~~~~~~----~~ 191 (283)
T COG0169 126 GKRVLILGA-GGAARAVAFALAEAGA------KRITVVNRTRERAEELADLFGE---LGAAVEAAALADLEGLE----EA 191 (283)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHcCC------CEEEEEeCCHHHHHHHHHHhhh---ccccccccccccccccc----cc
Confidence 467999998 7789999999999994 5899999999999999888752 11111222333322222 78
Q ss_pred cEEeecCCCCCCC--CH-HHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhh
Q 012947 90 KLLLNCVGPYRLH--GD-PVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQ 166 (452)
Q Consensus 90 dvVIn~aGp~~~~--~~-~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~ 166 (452)
|+|||+....... +. ++-..+.....-..|+-..+.-+ .+-+.|++.|..++++.+ |.++-++..
T Consensus 192 dliINaTp~Gm~~~~~~~~~~~~~l~~~~~v~D~vY~P~~T-----plL~~A~~~G~~~idGl~-------Mlv~Qaa~a 259 (283)
T COG0169 192 DLLINATPVGMAGPEGDSPVPAELLPKGAIVYDVVYNPLET-----PLLREARAQGAKTIDGLG-------MLVHQAAEA 259 (283)
T ss_pred CEEEECCCCCCCCCCCCCCCcHHhcCcCCEEEEeccCCCCC-----HHHHHHHHcCCeEECcHH-------HHHHHHHHH
Confidence 9999997533221 22 33345666666677887655422 234567888988776643 455555444
Q ss_pred c
Q 012947 167 W 167 (452)
Q Consensus 167 ~ 167 (452)
+
T Consensus 260 F 260 (283)
T COG0169 260 F 260 (283)
T ss_pred H
Confidence 4
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.74 E-value=3.8e-05 Score=76.72 Aligned_cols=34 Identities=9% Similarity=-0.115 Sum_probs=29.8
Q ss_pred CCeEEEEcCC--chHHHHHHHHHHHcCCCCCCCceEEEEEecC
Q 012947 10 LFDVIILGAS--GFTGKYVVREALKLFNFPSSPIKSLALAGRN 50 (452)
Q Consensus 10 ~~~ilV~GAT--G~iG~~va~~L~~~g~~~~~~~~~v~iagR~ 50 (452)
...++||||+ .+||+++++.|+++| ++|++..|.
T Consensus 8 gk~alITGa~~~~GIG~a~A~~la~~G-------a~Vvv~~~~ 43 (299)
T PRK06300 8 GKIAFIAGIGDDQGYGWGIAKALAEAG-------ATILVGTWV 43 (299)
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHCC-------CEEEEEecc
Confidence 3579999995 899999999999999 899997754
|
|
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00022 Score=73.05 Aligned_cols=79 Identities=13% Similarity=0.021 Sum_probs=58.9
Q ss_pred CCCeEEEEcCCchHHHH--HHHHHHHcCCCCCCCceEEEEEecChhH---------------HHHHHHHhCCCCCCCccE
Q 012947 9 ELFDVIILGASGFTGKY--VVREALKLFNFPSSPIKSLALAGRNPTR---------------VKQALQWASPSHSLSIPI 71 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~--va~~L~~~g~~~~~~~~~v~iagR~~~k---------------l~~l~~~l~~~~~~~v~~ 71 (452)
...++||+||++.+|.+ +++.| +.| .++++.++..++ +++..++. ...+..
T Consensus 40 ggK~aLVTGaSsGIGlA~~IA~al-~~G-------A~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~----G~~a~~ 107 (398)
T PRK13656 40 GPKKVLVIGASSGYGLASRIAAAF-GAG-------ADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAA----GLYAKS 107 (398)
T ss_pred CCCEEEEECCCchHhHHHHHHHHH-HcC-------CeEEEEecCcchhhhcccccccchHHHHHHHHHhc----CCceEE
Confidence 35689999999999999 89999 888 777777753321 22233322 234567
Q ss_pred EEEeCCCHHHHHHHHc-------CccEEeecCCCC
Q 012947 72 LTADTTDPPSLHRLCS-------QTKLLLNCVGPY 99 (452)
Q Consensus 72 v~~Dl~d~~sl~~~~~-------~~dvVIn~aGp~ 99 (452)
+.+|++++++++++++ +.|+|||++|..
T Consensus 108 i~~DVss~E~v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 108 INGDAFSDEIKQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred EEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCccC
Confidence 8999999999888776 579999999843
|
|
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.0005 Score=60.92 Aligned_cols=129 Identities=16% Similarity=0.155 Sum_probs=82.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~-~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
++|.|+||+|.+|+.++-.|...+- .-++.+.++++++++....++.. ............ .+ .+.++++
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l-----~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~-~~----~~~~~~a 70 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGL-----ADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS-GD----YEALKDA 70 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTT-----SSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE-SS----GGGGTTE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-----CCceEEeccCcccceeeehhhhhhhhhccccccccc-cc----ccccccc
Confidence 4899999999999999999999863 14799999999988877766632 001112222222 33 4457899
Q ss_pred cEEeecCCCCCCCCH---HHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhh
Q 012947 90 KLLLNCVGPYRLHGD---PVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQ 166 (452)
Q Consensus 90 dvVIn~aGp~~~~~~---~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~ 166 (452)
|+||.++|.....++ .+++.. ...++++..+..+.+ ..++.++- +-|-|+.++.+.+.
T Consensus 71 Divvitag~~~~~g~sR~~ll~~N-------------~~i~~~~~~~i~~~~-p~~~vivv-----tNPvd~~t~~~~~~ 131 (141)
T PF00056_consen 71 DIVVITAGVPRKPGMSRLDLLEAN-------------AKIVKEIAKKIAKYA-PDAIVIVV-----TNPVDVMTYVAQKY 131 (141)
T ss_dssp SEEEETTSTSSSTTSSHHHHHHHH-------------HHHHHHHHHHHHHHS-TTSEEEE------SSSHHHHHHHHHHH
T ss_pred cEEEEeccccccccccHHHHHHHh-------------HhHHHHHHHHHHHhC-CccEEEEe-----CCcHHHHHHHHHHh
Confidence 999999997554442 222222 234455544444444 23444442 45889999988876
Q ss_pred cC
Q 012947 167 WI 168 (452)
Q Consensus 167 ~~ 168 (452)
-.
T Consensus 132 s~ 133 (141)
T PF00056_consen 132 SG 133 (141)
T ss_dssp HT
T ss_pred hC
Confidence 54
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00023 Score=73.22 Aligned_cols=106 Identities=19% Similarity=0.243 Sum_probs=71.6
Q ss_pred CCCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCH-HHHHH
Q 012947 6 QIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDP-PSLHR 84 (452)
Q Consensus 6 ~~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~-~sl~~ 84 (452)
.+.++.+|+|.||||.+|+.+++.|.++| +.+....|+.++.+.+..... .......+..|...+ +.+..
T Consensus 75 ~~~~~~~VlVvGatG~vG~~iv~~llkrg-------f~vra~VRd~~~a~~~~~~~~--~d~~~~~v~~~~~~~~d~~~~ 145 (411)
T KOG1203|consen 75 NSKKPTTVLVVGATGKVGRRIVKILLKRG-------FSVRALVRDEQKAEDLLGVFF--VDLGLQNVEADVVTAIDILKK 145 (411)
T ss_pred CCCCCCeEEEecCCCchhHHHHHHHHHCC-------CeeeeeccChhhhhhhhcccc--cccccceeeeccccccchhhh
Confidence 34567889999999999999999999999 899999999999887765111 123445555554433 33344
Q ss_pred HHcC----ccEEeecCCCCCC-----C--------CHHHHHHHHHhCC-cEEEe
Q 012947 85 LCSQ----TKLLLNCVGPYRL-----H--------GDPVAAACVHSGC-DYLDI 120 (452)
Q Consensus 85 ~~~~----~dvVIn~aGp~~~-----~--------~~~vv~ac~~~g~-~yvDl 120 (452)
+++. ..+++-|+|-... + -.++++||...|+ |++-+
T Consensus 146 ~~~~~~~~~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vlv 199 (411)
T KOG1203|consen 146 LVEAVPKGVVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAGVKRVVLV 199 (411)
T ss_pred hhhhccccceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhCCceEEEE
Confidence 4443 3477777763211 1 1678888888888 44444
|
|
| >PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated | Back alignment and domain information |
|---|
Probab=97.68 E-value=9e-05 Score=75.45 Aligned_cols=101 Identities=15% Similarity=0.167 Sum_probs=65.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCcc-EEEEeCCCHHHHHHHHcCc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIP-ILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~-~v~~Dl~d~~sl~~~~~~~ 89 (452)
++|.|+||||++|+.+++.|.++.. .++..+.++.++.+.+.+... .+. ....++++.+.. ..+++
T Consensus 3 ~kVaIiGAtG~vG~~l~~~L~~~p~------~elv~v~~~~~~g~~l~~~~~-----~~~~~~~~~~~~~~~~--~~~~v 69 (343)
T PRK00436 3 IKVGIVGASGYTGGELLRLLLNHPE------VEIVAVTSRSSAGKPLSDVHP-----HLRGLVDLVLEPLDPE--ILAGA 69 (343)
T ss_pred eEEEEECCCCHHHHHHHHHHHcCCC------ceEEEEECccccCcchHHhCc-----ccccccCceeecCCHH--HhcCC
Confidence 6899999999999999999997642 676555543333222332221 111 111123232222 44789
Q ss_pred cEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHH
Q 012947 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEF 126 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~ 126 (452)
|+|+.|.+.. ....++.+|.++|++.||+++...+
T Consensus 70 D~Vf~alP~~--~~~~~v~~a~~aG~~VID~S~~fR~ 104 (343)
T PRK00436 70 DVVFLALPHG--VSMDLAPQLLEAGVKVIDLSADFRL 104 (343)
T ss_pred CEEEECCCcH--HHHHHHHHHHhCCCEEEECCcccCC
Confidence 9999988543 2367888899999999999987655
|
|
| >PRK12749 quinate/shikimate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00038 Score=69.18 Aligned_cols=137 Identities=14% Similarity=0.127 Sum_probs=85.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh---hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP---TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~---~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
..+++|+|| |+.+++++-.|+..+. .++.+..|+. +|.+++.+++.. .....+...++.+.+.+.+.+
T Consensus 124 ~k~vlvlGa-GGaarAi~~~l~~~g~------~~i~i~nRt~~~~~ka~~la~~~~~--~~~~~~~~~~~~~~~~l~~~~ 194 (288)
T PRK12749 124 GKTMVLLGA-GGASTAIGAQGAIEGL------KEIKLFNRRDEFFDKALAFAQRVNE--NTDCVVTVTDLADQQAFAEAL 194 (288)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCC------CEEEEEeCCccHHHHHHHHHHHhhh--ccCceEEEechhhhhhhhhhc
Confidence 357999998 6679999999998873 5899999994 588888877642 111122233343334466667
Q ss_pred cCccEEeecCCCCCCC--CH-HHHH-HHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHH
Q 012947 87 SQTKLLLNCVGPYRLH--GD-PVAA-ACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMF 162 (452)
Q Consensus 87 ~~~dvVIn~aGp~~~~--~~-~vv~-ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~ 162 (452)
.++|+|||+...-... .. ++.+ ..+..+...+|+...+.-+ .+-+.|++.|..++++. .|..+-
T Consensus 195 ~~aDivINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~P~~T-----~ll~~A~~~G~~~~~Gl-------~ML~~Q 262 (288)
T PRK12749 195 ASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNPHMT-----KLLQQAQQAGCKTIDGY-------GMLLWQ 262 (288)
T ss_pred ccCCEEEECCCCCCCCCCCCCCCCcHHHCCCCCEEEEecCCCccC-----HHHHHHHHCCCeEECCH-------HHHHHH
Confidence 7899999986432211 11 1111 2233455577888765533 23466788898887654 355555
Q ss_pred Hhhhc
Q 012947 163 NSRQW 167 (452)
Q Consensus 163 ~~~~~ 167 (452)
+...+
T Consensus 263 a~~~f 267 (288)
T PRK12749 263 GAEQF 267 (288)
T ss_pred HHHHH
Confidence 54444
|
|
| >TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.0001 Score=75.10 Aligned_cols=103 Identities=18% Similarity=0.270 Sum_probs=63.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEE-EEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLA-LAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~-iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
++|.|+||||++|+.+++.|.++.. .++. +++++.+..+.+.+... ..........+-.| .+++.+++
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~------~el~~l~~s~~sagk~~~~~~~--~l~~~~~~~~~~~~---~~~~~~~~ 69 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPE------VEITYLVSSRESAGKPVSEVHP--HLRGLVDLNLEPID---EEEIAEDA 69 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCC------ceEEEEeccchhcCCChHHhCc--cccccCCceeecCC---HHHhhcCC
Confidence 4799999999999999999997732 6766 44544322222222221 00011011111113 23444689
Q ss_pred cEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHH
Q 012947 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEF 126 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~ 126 (452)
|+||.|.+. . ....++..+.+.|++.||+++...+
T Consensus 70 DvVf~alP~-~-~s~~~~~~~~~~G~~VIDlS~~fR~ 104 (346)
T TIGR01850 70 DVVFLALPH-G-VSAELAPELLAAGVKVIDLSADFRL 104 (346)
T ss_pred CEEEECCCc-h-HHHHHHHHHHhCCCEEEeCChhhhc
Confidence 999999842 2 3367888888999999999986544
|
This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons. |
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.0004 Score=82.96 Aligned_cols=88 Identities=14% Similarity=0.201 Sum_probs=62.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHH---HHHHHHhC---C---CCCCCccEEEEeCCC--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRV---KQALQWAS---P---SHSLSIPILTADTTD-- 78 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl---~~l~~~l~---~---~~~~~v~~v~~Dl~d-- 78 (452)
..+|+|||||||+|.+++++|++++.. ...+|....|+..+. +.+.+.+. . ....++.++.+|+++
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~---~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~ 1047 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSN---SNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEK 1047 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCC---CCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCcc
Confidence 478999999999999999999987610 116888889975432 22222110 0 011367889999974
Q ss_pred ----HHHHHHHHcCccEEeecCCCCC
Q 012947 79 ----PPSLHRLCSQTKLLLNCVGPYR 100 (452)
Q Consensus 79 ----~~sl~~~~~~~dvVIn~aGp~~ 100 (452)
.+...++..++|+|||||++..
T Consensus 1048 lgl~~~~~~~l~~~~d~iiH~Aa~~~ 1073 (1389)
T TIGR03443 1048 FGLSDEKWSDLTNEVDVIIHNGALVH 1073 (1389)
T ss_pred CCcCHHHHHHHHhcCCEEEECCcEec
Confidence 4667788889999999998754
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.0013 Score=66.34 Aligned_cols=82 Identities=21% Similarity=0.212 Sum_probs=58.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+|.|+||.|.+|..++..|+..+. ..++++.+++ +++....++. +........+.+|+.++.+.++++
T Consensus 8 ~~KI~IiGaaG~VGs~~a~~l~~~~~-----~~elvL~Di~--~~~g~a~Dl~---~~~~~~~v~~~td~~~~~~~l~ga 77 (321)
T PTZ00325 8 MFKVAVLGAAGGIGQPLSLLLKQNPH-----VSELSLYDIV--GAPGVAADLS---HIDTPAKVTGYADGELWEKALRGA 77 (321)
T ss_pred CCEEEEECCCCHHHHHHHHHHhcCCC-----CCEEEEEecC--CCcccccchh---hcCcCceEEEecCCCchHHHhCCC
Confidence 35899999999999999999986552 1589999993 3333222332 111134456777766678899999
Q ss_pred cEEeecCCCCCC
Q 012947 90 KLLLNCVGPYRL 101 (452)
Q Consensus 90 dvVIn~aGp~~~ 101 (452)
|+||+++|....
T Consensus 78 DvVVitaG~~~~ 89 (321)
T PTZ00325 78 DLVLICAGVPRK 89 (321)
T ss_pred CEEEECCCCCCC
Confidence 999999997544
|
|
| >PRK13304 L-aspartate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00081 Score=65.98 Aligned_cols=116 Identities=14% Similarity=0.173 Sum_probs=79.1
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceE-EEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKS-LALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~-v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
++|.|+|. |.+|+.+++.|.+.++ + .+ +.+.+|+.++.+++.+.++ +. . .+| +++++.++
T Consensus 2 mrIgIIG~-G~iG~~ia~~l~~~~~-~----~elv~v~d~~~~~a~~~a~~~~------~~--~--~~~---~~ell~~~ 62 (265)
T PRK13304 2 LKIGIVGC-GAIASLITKAILSGRI-N----AELYAFYDRNLEKAENLASKTG------AK--A--CLS---IDELVEDV 62 (265)
T ss_pred CEEEEECc-cHHHHHHHHHHHcCCC-C----eEEEEEECCCHHHHHHHHHhcC------Ce--e--ECC---HHHHhcCC
Confidence 58999996 9999999999987531 1 44 5678999988877766432 11 1 123 45555789
Q ss_pred cEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEc
Q 012947 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVS 147 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~ 147 (452)
|+|+.|+++... ..++..+++.|.|.+.++-...........+.+.|+++|+.+..
T Consensus 63 DvVvi~a~~~~~--~~~~~~al~~Gk~Vvv~s~gAl~d~~~~~~L~~aA~~~g~~l~v 118 (265)
T PRK13304 63 DLVVECASVNAV--EEVVPKSLENGKDVIIMSVGALADKELFLKLYKLAKENNCKIYL 118 (265)
T ss_pred CEEEEcCChHHH--HHHHHHHHHcCCCEEEEchHHhcCHHHHHHHHHHHHHcCCEEEE
Confidence 999999976433 56778888999998887641111123334557788888877654
|
|
| >PRK14874 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00021 Score=72.53 Aligned_cols=97 Identities=18% Similarity=0.128 Sum_probs=67.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
++|.|+||||++|+.+++.|.+++.+ ..++..+.|+.+..+.+. + ....+...|+++. .++++|
T Consensus 2 ~~V~IvGAtG~vG~~l~~lL~~~~hp----~~~l~~l~s~~~~g~~l~--~-----~g~~i~v~d~~~~-----~~~~vD 65 (334)
T PRK14874 2 YNVAVVGATGAVGREMLNILEERNFP----VDKLRLLASARSAGKELS--F-----KGKELKVEDLTTF-----DFSGVD 65 (334)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCC----cceEEEEEccccCCCeee--e-----CCceeEEeeCCHH-----HHcCCC
Confidence 57999999999999999999987521 256677776654433321 1 1234555566532 236899
Q ss_pred EEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHH
Q 012947 91 LLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPE 125 (452)
Q Consensus 91 vVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~ 125 (452)
+||.|+|.. ....++....+.|+..||+++.+.
T Consensus 66 vVf~A~g~g--~s~~~~~~~~~~G~~VIDlS~~~R 98 (334)
T PRK14874 66 IALFSAGGS--VSKKYAPKAAAAGAVVIDNSSAFR 98 (334)
T ss_pred EEEECCChH--HHHHHHHHHHhCCCEEEECCchhh
Confidence 999998754 235677777888999999998653
|
|
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.0004 Score=60.85 Aligned_cols=105 Identities=15% Similarity=0.274 Sum_probs=70.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC-------------------hhHHHHHHHHhCC-CCCCC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASP-SHSLS 68 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~-------------------~~kl~~l~~~l~~-~~~~~ 68 (452)
|+.+|+|.|+ |.+|..+++.|++.|- -++.+++.+ ..|.+.+.+.+.. ....+
T Consensus 1 r~~~v~iiG~-G~vGs~va~~L~~~Gv------~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~ 73 (135)
T PF00899_consen 1 RNKRVLIIGA-GGVGSEVAKNLARSGV------GKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVE 73 (135)
T ss_dssp HT-EEEEEST-SHHHHHHHHHHHHHTT------SEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSE
T ss_pred CCCEEEEECc-CHHHHHHHHHHHHhCC------CceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCcee
Confidence 3568999998 7899999999999984 477777754 1233333333321 11234
Q ss_pred ccEEEEeCCCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecC
Q 012947 69 IPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISG 122 (452)
Q Consensus 69 v~~v~~Dl~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsg 122 (452)
+..+..++ +.+.+.+.++++|+||+|...... ...+.+.|.+.+..+|+...
T Consensus 74 v~~~~~~~-~~~~~~~~~~~~d~vi~~~d~~~~-~~~l~~~~~~~~~p~i~~~~ 125 (135)
T PF00899_consen 74 VEAIPEKI-DEENIEELLKDYDIVIDCVDSLAA-RLLLNEICREYGIPFIDAGV 125 (135)
T ss_dssp EEEEESHC-SHHHHHHHHHTSSEEEEESSSHHH-HHHHHHHHHHTT-EEEEEEE
T ss_pred eeeeeccc-ccccccccccCCCEEEEecCCHHH-HHHHHHHHHHcCCCEEEEEe
Confidence 45555556 457788888999999999865322 24577788888888877653
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00026 Score=70.91 Aligned_cols=106 Identities=19% Similarity=0.246 Sum_probs=68.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
.++|.|.|||||+|..+.+.|+.+.. .++.++..+..+-+.+.+..- ......-.....-|++.+ ..+++
T Consensus 2 ~~kV~IvGasGYtG~EL~rlL~~Hp~------ve~~~~ss~~~~g~~~~~~~p--~l~g~~~l~~~~~~~~~~--~~~~~ 71 (349)
T COG0002 2 MIKVGIVGASGYTGLELLRLLAGHPD------VELILISSRERAGKPVSDVHP--NLRGLVDLPFQTIDPEKI--ELDEC 71 (349)
T ss_pred CceEEEEcCCCCcHHHHHHHHhcCCC------eEEEEeechhhcCCchHHhCc--ccccccccccccCChhhh--hcccC
Confidence 46899999999999999999999863 676666554433333333221 001111122222233333 45579
Q ss_pred cEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHH
Q 012947 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFM 127 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~ 127 (452)
|+||.|.- ......++....+.|+..||+|++..+-
T Consensus 72 DvvFlalP--hg~s~~~v~~l~~~g~~VIDLSadfR~~ 107 (349)
T COG0002 72 DVVFLALP--HGVSAELVPELLEAGCKVIDLSADFRLK 107 (349)
T ss_pred CEEEEecC--chhHHHHHHHHHhCCCeEEECCcccccC
Confidence 99999872 2233678888888899999999986653
|
|
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00072 Score=63.64 Aligned_cols=104 Identities=18% Similarity=0.256 Sum_probs=72.1
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC-------------------hhHHHHHHHHhCC-CCCCC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASP-SHSLS 68 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~-------------------~~kl~~l~~~l~~-~~~~~ 68 (452)
++.+|+|+|+ |.+|..+++.|++.|. -++.+++++ ..|.+.+.+.+.. ....+
T Consensus 20 ~~~~VlviG~-GglGs~ia~~La~~Gv------~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~ 92 (202)
T TIGR02356 20 LNSHVLIIGA-GGLGSPAALYLAGAGV------GTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQ 92 (202)
T ss_pred cCCCEEEECC-CHHHHHHHHHHHHcCC------CeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCE
Confidence 3567999997 7889999999999983 478888876 3455555555432 11223
Q ss_pred ccEEEEeCCCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEec
Q 012947 69 IPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 69 v~~v~~Dl~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDls 121 (452)
+..+..++ +.+.+.+.++++|+||.|...+. ....+.+.|.+.++.+|+..
T Consensus 93 i~~~~~~i-~~~~~~~~~~~~D~Vi~~~d~~~-~r~~l~~~~~~~~ip~i~~~ 143 (202)
T TIGR02356 93 VTALKERV-TAENLELLINNVDLVLDCTDNFA-TRYLINDACVALGTPLISAA 143 (202)
T ss_pred EEEehhcC-CHHHHHHHHhCCCEEEECCCCHH-HHHHHHHHHHHcCCCEEEEE
Confidence 33333344 34678888999999999986432 22457788988888888765
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.0011 Score=66.97 Aligned_cols=135 Identities=13% Similarity=0.077 Sum_probs=76.0
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhH--HHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR--VKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~k--l~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
+|.|+||+|.+|..++..|+..+-.......++.+.++++.+ ++....++.. ...... ..+.-.....+.++++
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a~g~~~Dl~d---~~~~~~-~~~~~~~~~~~~~~~a 76 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVLEGVVMELMD---CAFPLL-DGVVPTHDPAVAFTDV 76 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccccceeEeehhc---ccchhc-CceeccCChHHHhCCC
Confidence 589999999999999999987652100011369999996543 4433333321 000000 0000001346788999
Q ss_pred cEEeecCCCCCCCCH---HHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhh
Q 012947 90 KLLLNCVGPYRLHGD---PVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQ 166 (452)
Q Consensus 90 dvVIn~aGp~~~~~~---~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~ 166 (452)
|+||++||.....++ .+++.. ...++.+.....+.+...++.|+.+ -|-|+++|.+.+.
T Consensus 77 DiVVitAG~~~~~~~tr~~ll~~N-------------~~i~k~i~~~i~~~~~~~~iiivvs-----NPvDv~t~v~~~~ 138 (324)
T TIGR01758 77 DVAILVGAFPRKEGMERRDLLSKN-------------VKIFKEQGRALDKLAKKDCKVLVVG-----NPANTNALVLSNY 138 (324)
T ss_pred CEEEEcCCCCCCCCCcHHHHHHHH-------------HHHHHHHHHHHHhhCCCCeEEEEeC-----CcHHHHHHHHHHH
Confidence 999999996544332 222222 2234444444433332334444433 6889999999888
Q ss_pred cC
Q 012947 167 WI 168 (452)
Q Consensus 167 ~~ 168 (452)
..
T Consensus 139 sg 140 (324)
T TIGR01758 139 AP 140 (324)
T ss_pred cC
Confidence 73
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >TIGR01759 MalateDH-SF1 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.0011 Score=66.98 Aligned_cols=140 Identities=14% Similarity=0.047 Sum_probs=82.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~--~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
++++|.|+||+|.+|..++-.|+..+-.+.....++.+.++++ ++++....++.........-+. +. ....+.+
T Consensus 2 ~p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~--i~--~~~~~~~ 77 (323)
T TIGR01759 2 KPVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVV--AT--TDPEEAF 77 (323)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcE--Ee--cChHHHh
Confidence 5799999999999999999999887631111113799999965 5566666655310000000001 11 1235678
Q ss_pred cCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhh
Q 012947 87 SQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQ 166 (452)
Q Consensus 87 ~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~ 166 (452)
+++|+||.+||.....++.=.+.... ....++.+.....+.+...++.|+.+ -|-|+.+|.+.+.
T Consensus 78 ~daDvVVitAG~~~k~g~tR~dll~~----------Na~i~~~i~~~i~~~~~~~~iiivvs-----NPvDv~t~v~~k~ 142 (323)
T TIGR01759 78 KDVDAALLVGAFPRKPGMERADLLSK----------NGKIFKEQGKALNKVAKKDVKVLVVG-----NPANTNALIASKN 142 (323)
T ss_pred CCCCEEEEeCCCCCCCCCcHHHHHHH----------HHHHHHHHHHHHHhhCCCCeEEEEeC-----CcHHHHHHHHHHH
Confidence 89999999999755444221111111 12334444444444443344444433 6889999998888
Q ss_pred c
Q 012947 167 W 167 (452)
Q Consensus 167 ~ 167 (452)
.
T Consensus 143 s 143 (323)
T TIGR01759 143 A 143 (323)
T ss_pred c
Confidence 7
|
This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. |
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00076 Score=64.58 Aligned_cols=129 Identities=20% Similarity=0.222 Sum_probs=88.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-HcCc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~-~~~~ 89 (452)
++++|.|+ |-+|..+|+.|.+.| +.|+++.+++++.++...+ ......+.+|.+|++.|+++ +.++
T Consensus 1 m~iiIiG~-G~vG~~va~~L~~~g-------~~Vv~Id~d~~~~~~~~~~-----~~~~~~v~gd~t~~~~L~~agi~~a 67 (225)
T COG0569 1 MKIIIIGA-GRVGRSVARELSEEG-------HNVVLIDRDEERVEEFLAD-----ELDTHVVIGDATDEDVLEEAGIDDA 67 (225)
T ss_pred CEEEEECC-cHHHHHHHHHHHhCC-------CceEEEEcCHHHHHHHhhh-----hcceEEEEecCCCHHHHHhcCCCcC
Confidence 47899998 788999999999998 7999999999998875442 13568899999999999998 8899
Q ss_pred cEEeecCCCCCCCCHHHHH---HHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhh
Q 012947 90 KLLLNCVGPYRLHGDPVAA---ACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQ 166 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~---ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~ 166 (452)
|++|-+.|--. .+++- ++.+.|+.++-.....+. |.+..++-|+..+ -.|....+..+.+.
T Consensus 68 D~vva~t~~d~---~N~i~~~la~~~~gv~~viar~~~~~-------~~~~~~~~g~~~i------i~Pe~~~~~~l~~~ 131 (225)
T COG0569 68 DAVVAATGNDE---VNSVLALLALKEFGVPRVIARARNPE-------HEKVLEKLGADVI------ISPEKLAAKRLARL 131 (225)
T ss_pred CEEEEeeCCCH---HHHHHHHHHHHhcCCCcEEEEecCHH-------HHHHHHHcCCcEE------ECHHHHHHHHHHHH
Confidence 99998876322 33332 223357766654433222 2233344453322 13555666666666
Q ss_pred cC
Q 012947 167 WI 168 (452)
Q Consensus 167 ~~ 168 (452)
+.
T Consensus 132 i~ 133 (225)
T COG0569 132 IV 133 (225)
T ss_pred hc
Confidence 64
|
|
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00086 Score=68.13 Aligned_cols=103 Identities=16% Similarity=0.174 Sum_probs=73.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh---------------------hHHHHHHHHhCC-CCCC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP---------------------TRVKQALQWASP-SHSL 67 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~---------------------~kl~~l~~~l~~-~~~~ 67 (452)
..+|+|+|+ |.+|..++++|++.|. -++.+++++. .|.+.+.+.+.. ....
T Consensus 24 ~~~VlIiG~-GglGs~va~~La~aGv------g~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v 96 (338)
T PRK12475 24 EKHVLIVGA-GALGAANAEALVRAGI------GKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEV 96 (338)
T ss_pred CCcEEEECC-CHHHHHHHHHHHHcCC------CEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCc
Confidence 467999998 6799999999999983 4888888863 244444444422 1233
Q ss_pred CccEEEEeCCCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEec
Q 012947 68 SIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 68 ~v~~v~~Dl~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDls 121 (452)
++..+..|++ ++.++++++++|+||.+...+.. ...+.+.|.+.++.+|...
T Consensus 97 ~i~~~~~~~~-~~~~~~~~~~~DlVid~~D~~~~-r~~in~~~~~~~ip~i~~~ 148 (338)
T PRK12475 97 EIVPVVTDVT-VEELEELVKEVDLIIDATDNFDT-RLLINDLSQKYNIPWIYGG 148 (338)
T ss_pred EEEEEeccCC-HHHHHHHhcCCCEEEEcCCCHHH-HHHHHHHHHHcCCCEEEEE
Confidence 4555666775 46788899999999999865432 2456788888888877654
|
|
| >PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00019 Score=72.73 Aligned_cols=100 Identities=20% Similarity=0.295 Sum_probs=63.6
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 8 ~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
++.++|.|+||||++|+.+++.|.+++. +..++..+.. .++..+... + .... .++.+.+.. + ++
T Consensus 2 ~~~~~IaIvGATG~vG~eLlrlL~~~~h----P~~~l~~v~s-~~~aG~~l~-~-----~~~~---l~~~~~~~~-~-~~ 65 (336)
T PRK05671 2 SQPLDIAVVGATGTVGEALVQILEERDF----PVGTLHLLAS-SESAGHSVP-F-----AGKN---LRVREVDSF-D-FS 65 (336)
T ss_pred CCCCEEEEEccCCHHHHHHHHHHhhCCC----CceEEEEEEC-cccCCCeec-c-----CCcc---eEEeeCChH-H-hc
Confidence 3458999999999999999999997542 1245544433 222211111 1 1112 233222221 2 47
Q ss_pred CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHH
Q 012947 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPE 125 (452)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~ 125 (452)
++|+|+.++++. ....+++.+.+.|+..||+++...
T Consensus 66 ~vD~vFla~p~~--~s~~~v~~~~~~G~~VIDlS~~fR 101 (336)
T PRK05671 66 QVQLAFFAAGAA--VSRSFAEKARAAGCSVIDLSGALP 101 (336)
T ss_pred CCCEEEEcCCHH--HHHHHHHHHHHCCCeEEECchhhc
Confidence 899999988632 336788888899999999998764
|
|
| >PRK13302 putative L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.0025 Score=62.74 Aligned_cols=120 Identities=17% Similarity=0.197 Sum_probs=81.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEE-EEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLA-LAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~-iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
.+++|-|+|. |.+|+.+++.|.+..+ .+++. +.+|++++.+++.++++. ... .++ ++++++
T Consensus 5 ~~irIGIIG~-G~IG~~~a~~L~~~~~-----~~el~aV~dr~~~~a~~~a~~~g~-----~~~----~~~---~eell~ 66 (271)
T PRK13302 5 PELRVAIAGL-GAIGKAIAQALDRGLP-----GLTLSAVAVRDPQRHADFIWGLRR-----PPP----VVP---LDQLAT 66 (271)
T ss_pred CeeEEEEECc-cHHHHHHHHHHHhcCC-----CeEEEEEECCCHHHHHHHHHhcCC-----Ccc----cCC---HHHHhc
Confidence 3588999996 9999999999987411 16664 789999988777765421 011 123 445567
Q ss_pred CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCC
Q 012947 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGF 151 (452)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~ 151 (452)
++|+|+-|+++.. + ..+...++++|.|.+..+.... .. ..++.+.++++|+.+....|+
T Consensus 67 ~~D~Vvi~tp~~~-h-~e~~~~aL~aGk~Vi~~s~gal--~~-~~~L~~~A~~~g~~l~v~sGa 125 (271)
T PRK13302 67 HADIVVEAAPASV-L-RAIVEPVLAAGKKAIVLSVGAL--LR-NEDLIDLARQNGGQIIVPTGA 125 (271)
T ss_pred CCCEEEECCCcHH-H-HHHHHHHHHcCCcEEEecchhH--Hh-HHHHHHHHHHcCCEEEEcchH
Confidence 8999999996543 2 5677889999999876653211 11 245567788889887544444
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00098 Score=67.21 Aligned_cols=83 Identities=18% Similarity=0.067 Sum_probs=58.5
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
++.+|.|+||+|.+|..++..|+.++.. .++.+.++++ .+....++. +........++.+.+++.+.+++
T Consensus 17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~-----~el~L~Di~~--~~g~a~Dl~---~~~~~~~i~~~~~~~d~~~~l~~ 86 (323)
T PLN00106 17 PGFKVAVLGAAGGIGQPLSLLMKMNPLV-----SELHLYDIAN--TPGVAADVS---HINTPAQVRGFLGDDQLGDALKG 86 (323)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCC-----CEEEEEecCC--CCeeEchhh---hCCcCceEEEEeCCCCHHHHcCC
Confidence 4579999999999999999999876621 4799999987 222222332 11123344455455568889999
Q ss_pred ccEEeecCCCCCC
Q 012947 89 TKLLLNCVGPYRL 101 (452)
Q Consensus 89 ~dvVIn~aGp~~~ 101 (452)
+|+||++||.-..
T Consensus 87 aDiVVitAG~~~~ 99 (323)
T PLN00106 87 ADLVIIPAGVPRK 99 (323)
T ss_pred CCEEEEeCCCCCC
Confidence 9999999996544
|
|
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0018 Score=66.58 Aligned_cols=74 Identities=20% Similarity=0.204 Sum_probs=60.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
++.+++|+|+ |-+|+.+++.+...| .+|.+.+|+.++++.+...++ ..+..+..+++.+.+.+++
T Consensus 166 ~~~~VlViGa-G~vG~~aa~~a~~lG-------a~V~v~d~~~~~~~~l~~~~g-------~~v~~~~~~~~~l~~~l~~ 230 (370)
T TIGR00518 166 EPGDVTIIGG-GVVGTNAAKMANGLG-------ATVTILDINIDRLRQLDAEFG-------GRIHTRYSNAYEIEDAVKR 230 (370)
T ss_pred CCceEEEEcC-CHHHHHHHHHHHHCC-------CeEEEEECCHHHHHHHHHhcC-------ceeEeccCCHHHHHHHHcc
Confidence 4567999988 889999999999988 789999999999877766543 1233456778889999999
Q ss_pred ccEEeecCC
Q 012947 89 TKLLLNCVG 97 (452)
Q Consensus 89 ~dvVIn~aG 97 (452)
+|+||++++
T Consensus 231 aDvVI~a~~ 239 (370)
T TIGR00518 231 ADLLIGAVL 239 (370)
T ss_pred CCEEEEccc
Confidence 999999984
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0018 Score=64.29 Aligned_cols=114 Identities=17% Similarity=0.186 Sum_probs=75.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+++|+|+ |.+|+.+++.|...| .+|.+..|+.++++...+ .+ ... . +.+++.+.++++
T Consensus 151 gk~v~IiG~-G~iG~avA~~L~~~G-------~~V~v~~R~~~~~~~~~~-~g------~~~--~---~~~~l~~~l~~a 210 (287)
T TIGR02853 151 GSNVMVLGF-GRTGMTIARTFSALG-------ARVFVGARSSADLARITE-MG------LIP--F---PLNKLEEKVAEI 210 (287)
T ss_pred CCEEEEEcC-hHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHH-CC------Cee--e---cHHHHHHHhccC
Confidence 468999998 789999999999988 799999999987655432 21 111 1 235678888999
Q ss_pred cEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCC
Q 012947 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGF 151 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~ 151 (452)
|+|||++. ........++.. ..+.-.||++..+.-+ .+ +.|++.|+..+.+-|.
T Consensus 211 DiVint~P-~~ii~~~~l~~~-k~~aliIDlas~Pg~t-----df-~~Ak~~G~~a~~~~gl 264 (287)
T TIGR02853 211 DIVINTIP-ALVLTADVLSKL-PKHAVIIDLASKPGGT-----DF-EYAKKRGIKALLAPGL 264 (287)
T ss_pred CEEEECCC-hHHhCHHHHhcC-CCCeEEEEeCcCCCCC-----CH-HHHHHCCCEEEEeCCC
Confidence 99999983 322223333222 3456688887654321 12 4567778776654443
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >PLN00112 malate dehydrogenase (NADP); Provisional | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0016 Score=68.14 Aligned_cols=142 Identities=13% Similarity=0.036 Sum_probs=86.6
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHHcCCC--CCCCceEEEEEecChhHHHHHHHHhCCCC-CCCccEEEEeCCCHHHHH
Q 012947 7 IPELFDVIILGASGFTGKYVVREALKLFNF--PSSPIKSLALAGRNPTRVKQALQWASPSH-SLSIPILTADTTDPPSLH 83 (452)
Q Consensus 7 ~~~~~~ilV~GATG~iG~~va~~L~~~g~~--~~~~~~~v~iagR~~~kl~~l~~~l~~~~-~~~v~~v~~Dl~d~~sl~ 83 (452)
..++.+|.|+||+|.+|..++-.|+...-. +..-..++.+.++++++++....++.... .....+... ..| .
T Consensus 97 ~~~~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~-~~~----y 171 (444)
T PLN00112 97 WKKLINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIG-IDP----Y 171 (444)
T ss_pred CCCCeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEe-cCC----H
Confidence 446799999999999999999999987110 00011379999999999988877774200 000122211 123 4
Q ss_pred HHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHH
Q 012947 84 RLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFN 163 (452)
Q Consensus 84 ~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~ 163 (452)
+.++++|+||-++|.-...|+.=.+.... ....++.+.....+.+..++++|+-+ -|-|+.+|.+
T Consensus 172 e~~kdaDiVVitAG~prkpG~tR~dLl~~----------N~~I~k~i~~~I~~~a~p~~ivIVVs-----NPvDv~t~v~ 236 (444)
T PLN00112 172 EVFQDAEWALLIGAKPRGPGMERADLLDI----------NGQIFAEQGKALNEVASRNVKVIVVG-----NPCNTNALIC 236 (444)
T ss_pred HHhCcCCEEEECCCCCCCCCCCHHHHHHH----------HHHHHHHHHHHHHHhcCCCeEEEEcC-----CcHHHHHHHH
Confidence 56889999999999755444221111111 12334444444443233345555533 6889999999
Q ss_pred hhhcC
Q 012947 164 SRQWI 168 (452)
Q Consensus 164 ~~~~~ 168 (452)
.+...
T Consensus 237 ~k~sg 241 (444)
T PLN00112 237 LKNAP 241 (444)
T ss_pred HHHcC
Confidence 88774
|
|
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0015 Score=66.50 Aligned_cols=103 Identities=16% Similarity=0.209 Sum_probs=72.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh---------------------hHHHHHHHHhCC-CCCC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP---------------------TRVKQALQWASP-SHSL 67 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~---------------------~kl~~l~~~l~~-~~~~ 67 (452)
..+|+|+|+ |++|..++++|++.|. -++.+++++. .|.+.+.+.+.. ....
T Consensus 24 ~~~VlVvG~-GglGs~va~~La~aGv------g~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v 96 (339)
T PRK07688 24 EKHVLIIGA-GALGTANAEMLVRAGV------GKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDV 96 (339)
T ss_pred CCcEEEECC-CHHHHHHHHHHHHcCC------CeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCc
Confidence 467999999 8899999999999983 4889988863 243433333321 1123
Q ss_pred CccEEEEeCCCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEec
Q 012947 68 SIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 68 ~v~~v~~Dl~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDls 121 (452)
++..+..+++ ++.+.+++++.|+||.|..-+. ....+.++|.+.++.+|..+
T Consensus 97 ~v~~~~~~~~-~~~~~~~~~~~DlVid~~Dn~~-~r~~ln~~~~~~~iP~i~~~ 148 (339)
T PRK07688 97 RVEAIVQDVT-AEELEELVTGVDLIIDATDNFE-TRFIVNDAAQKYGIPWIYGA 148 (339)
T ss_pred EEEEEeccCC-HHHHHHHHcCCCEEEEcCCCHH-HHHHHHHHHHHhCCCEEEEe
Confidence 4455555664 4677888999999999986442 22467788998888877654
|
|
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0035 Score=63.06 Aligned_cols=132 Identities=15% Similarity=0.141 Sum_probs=80.3
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC--CCCCCccEEEEeCCCHHHHHH
Q 012947 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--SHSLSIPILTADTTDPPSLHR 84 (452)
Q Consensus 7 ~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~--~~~~~v~~v~~Dl~d~~sl~~ 84 (452)
+.+..+|.|+|| |.+|..++-.|+..+-. -++.+.++++++++....++.. +...++.+ .. .+ .+
T Consensus 3 ~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~-----~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i-~~--~~----~~ 69 (315)
T PRK00066 3 KKQHNKVVLVGD-GAVGSSYAYALVNQGIA-----DELVIIDINKEKAEGDAMDLSHAVPFTSPTKI-YA--GD----YS 69 (315)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhcCCC-----CEEEEEeCCCchhHHHHHHHHhhccccCCeEE-Ee--CC----HH
Confidence 345679999998 99999999999887721 3799999999998888777742 11112222 21 23 23
Q ss_pred HHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHh
Q 012947 85 LCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNS 164 (452)
Q Consensus 85 ~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~ 164 (452)
.++++|+||.++|.....++.=.+.... ....+++......+.+. .+..|+ . +-|.|+.++.+.
T Consensus 70 ~~~~adivIitag~~~k~g~~R~dll~~----------N~~i~~~i~~~i~~~~~-~~~viv-v----sNP~d~~~~~~~ 133 (315)
T PRK00066 70 DCKDADLVVITAGAPQKPGETRLDLVEK----------NLKIFKSIVGEVMASGF-DGIFLV-A----SNPVDILTYATW 133 (315)
T ss_pred HhCCCCEEEEecCCCCCCCCCHHHHHHH----------HHHHHHHHHHHHHHhCC-CeEEEE-c----cCcHHHHHHHHH
Confidence 4789999999999755444211111111 12333443333322222 233333 2 368899998877
Q ss_pred hhc
Q 012947 165 RQW 167 (452)
Q Consensus 165 ~~~ 167 (452)
+..
T Consensus 134 k~s 136 (315)
T PRK00066 134 KLS 136 (315)
T ss_pred HHh
Confidence 764
|
|
| >TIGR00036 dapB dihydrodipicolinate reductase | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0052 Score=60.34 Aligned_cols=124 Identities=17% Similarity=0.152 Sum_probs=77.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEE-EEecCh-hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLA-LAGRNP-TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~-iagR~~-~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
++|.|+|++|.+|+.+++.+.+... ++++ +++|+. ++..+-..++.. .....+.. .+|.+++ ...
T Consensus 2 ikV~IiGa~G~MG~~i~~~i~~~~~------~elvav~d~~~~~~~~~~~~~~~~--~~~~gv~~--~~d~~~l---~~~ 68 (266)
T TIGR00036 2 IKVAVAGAAGRMGRELIKAALAAEG------LQLVAAFERHGSSLQGTDAGELAG--IGKVGVPV--TDDLEAV---ETD 68 (266)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCC------CEEEEEEecCCccccCCCHHHhcC--cCcCCcee--eCCHHHh---cCC
Confidence 5899999999999999999987642 5544 456432 221111111110 00111111 2344444 356
Q ss_pred ccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCC
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGF 151 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~ 151 (452)
+|+||.+..|... ..+++.|+++|++.|--+- .|..+....+.+.|+++|+.++-+..|
T Consensus 69 ~DvVIdfT~p~~~--~~~~~~al~~g~~vVigtt--g~~~e~~~~l~~aA~~~g~~v~~a~Nf 127 (266)
T TIGR00036 69 PDVLIDFTTPEGV--LNHLKFALEHGVRLVVGTT--GFSEEDKQELADLAEKAGIAAVIAPNF 127 (266)
T ss_pred CCEEEECCChHHH--HHHHHHHHHCCCCEEEECC--CCCHHHHHHHHHHHhcCCccEEEECcc
Confidence 8999999865432 6789999999999775432 344445566778888888877655544
|
|
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.00058 Score=65.59 Aligned_cols=73 Identities=15% Similarity=0.171 Sum_probs=50.0
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCC--HHHHHHHHcCcc
Q 012947 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTD--PPSLHRLCSQTK 90 (452)
Q Consensus 13 ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d--~~sl~~~~~~~d 90 (452)
.+=-.+||++|++++++|+++| ++|.++.|+.... .. ...++.++.++..+ .+.+.+.++++|
T Consensus 19 ~itN~SSG~iG~aLA~~L~~~G-------~~V~li~r~~~~~-----~~---~~~~v~~i~v~s~~~m~~~l~~~~~~~D 83 (229)
T PRK06732 19 GITNHSTGQLGKIIAETFLAAG-------HEVTLVTTKTAVK-----PE---PHPNLSIIEIENVDDLLETLEPLVKDHD 83 (229)
T ss_pred eecCccchHHHHHHHHHHHhCC-------CEEEEEECccccc-----CC---CCCCeEEEEEecHHHHHHHHHHHhcCCC
Confidence 3334578999999999999998 8999988764211 00 11345565554332 245666777899
Q ss_pred EEeecCCCCC
Q 012947 91 LLLNCVGPYR 100 (452)
Q Consensus 91 vVIn~aGp~~ 100 (452)
+||||||...
T Consensus 84 ivIh~AAvsd 93 (229)
T PRK06732 84 VLIHSMAVSD 93 (229)
T ss_pred EEEeCCccCC
Confidence 9999999753
|
|
| >TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0021 Score=66.26 Aligned_cols=142 Identities=13% Similarity=0.035 Sum_probs=84.5
Q ss_pred CCCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEE--ecChhHHHHHHHHhCCCC-CCCccEEEEeCCCHHHH
Q 012947 6 QIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA--GRNPTRVKQALQWASPSH-SLSIPILTADTTDPPSL 82 (452)
Q Consensus 6 ~~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~ia--gR~~~kl~~l~~~l~~~~-~~~v~~v~~Dl~d~~sl 82 (452)
+..++.+|.|+||+|.+|..++-.|+..+-.+..+...+.+. +++.++++....++.... .....+... ..|
T Consensus 40 ~~~~p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~-~~~---- 114 (387)
T TIGR01757 40 SWKKTVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIG-IDP---- 114 (387)
T ss_pred cCCCCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEe-cCC----
Confidence 445689999999999999999999998763110001234444 899999988777774200 000111111 122
Q ss_pred HHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHH
Q 012947 83 HRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMF 162 (452)
Q Consensus 83 ~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~ 162 (452)
.+.++++|+||.++|.....++.=.+... .....++.+.....+.+...+++||-+ -|-|+.+|.
T Consensus 115 y~~~kdaDIVVitAG~prkpg~tR~dll~----------~N~~I~k~i~~~I~~~a~~~~iviVVs-----NPvDv~t~v 179 (387)
T TIGR01757 115 YEVFEDADWALLIGAKPRGPGMERADLLD----------INGQIFADQGKALNAVASKNCKVLVVG-----NPCNTNALI 179 (387)
T ss_pred HHHhCCCCEEEECCCCCCCCCCCHHHHHH----------HHHHHHHHHHHHHHHhCCCCeEEEEcC-----CcHHHHHHH
Confidence 46688999999999975544421111111 112334444444444443445455433 688999999
Q ss_pred Hhhhc
Q 012947 163 NSRQW 167 (452)
Q Consensus 163 ~~~~~ 167 (452)
+.+..
T Consensus 180 ~~k~s 184 (387)
T TIGR01757 180 AMKNA 184 (387)
T ss_pred HHHHc
Confidence 88776
|
This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized. |
| >COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0021 Score=66.39 Aligned_cols=95 Identities=15% Similarity=0.187 Sum_probs=71.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+++|+|| |=+|..++++|.+++. .++.++.|+.++.++++++++ +++..-+++...+..+
T Consensus 178 ~~~vlvIGA-Gem~~lva~~L~~~g~------~~i~IaNRT~erA~~La~~~~-----------~~~~~l~el~~~l~~~ 239 (414)
T COG0373 178 DKKVLVIGA-GEMGELVAKHLAEKGV------KKITIANRTLERAEELAKKLG-----------AEAVALEELLEALAEA 239 (414)
T ss_pred cCeEEEEcc-cHHHHHHHHHHHhCCC------CEEEEEcCCHHHHHHHHHHhC-----------CeeecHHHHHHhhhhC
Confidence 457999998 8899999999999984 699999999999999999873 3344557789999999
Q ss_pred cEEeecCCCC-CCCCHHHHHHHHHhCCc--EEEecC
Q 012947 90 KLLLNCVGPY-RLHGDPVAAACVHSGCD--YLDISG 122 (452)
Q Consensus 90 dvVIn~aGp~-~~~~~~vv~ac~~~g~~--yvDlsg 122 (452)
|+||.+.|.. ..-....++.+....-+ .||+.-
T Consensus 240 DvVissTsa~~~ii~~~~ve~a~~~r~~~livDiav 275 (414)
T COG0373 240 DVVISSTSAPHPIITREMVERALKIRKRLLIVDIAV 275 (414)
T ss_pred CEEEEecCCCccccCHHHHHHHHhcccCeEEEEecC
Confidence 9999987633 22233444444443332 566654
|
|
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0034 Score=63.14 Aligned_cols=82 Identities=17% Similarity=0.102 Sum_probs=51.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
++|+|+||||.+|++++..|..... ....+++.+|++. .+...-++. .......+.+ .+.+++.+.++++|
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~----~~~el~L~d~~~~-~~g~alDl~--~~~~~~~i~~--~~~~d~~~~l~~~D 71 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLP----AGSELSLYDIAPV-TPGVAVDLS--HIPTAVKIKG--FSGEDPTPALEGAD 71 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCC----CccEEEEEecCCC-Ccceehhhh--cCCCCceEEE--eCCCCHHHHcCCCC
Confidence 5899999999999999998865321 1157888898754 222222221 1111223333 22345567778999
Q ss_pred EEeecCCCCCC
Q 012947 91 LLLNCVGPYRL 101 (452)
Q Consensus 91 vVIn~aGp~~~ 101 (452)
+||.|+|....
T Consensus 72 iVIitaG~~~~ 82 (312)
T PRK05086 72 VVLISAGVARK 82 (312)
T ss_pred EEEEcCCCCCC
Confidence 99999997544
|
|
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.00048 Score=59.67 Aligned_cols=111 Identities=21% Similarity=0.295 Sum_probs=65.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEE-EEEecChh-HHH-HHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPT-RVK-QALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v-~iagR~~~-kl~-~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
++|+|+|++|-+|+.+++.+.++.. +++ .++.|+.+ ... .+.+-.+. ....+.+ .++++++++
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~------~~lv~~v~~~~~~~~g~d~g~~~~~-~~~~~~v-------~~~l~~~~~ 66 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPG------FELVGAVDRKPSAKVGKDVGELAGI-GPLGVPV-------TDDLEELLE 66 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTT------EEEEEEEETTTSTTTTSBCHHHCTS-ST-SSBE-------BS-HHHHTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCC------cEEEEEEecCCcccccchhhhhhCc-CCccccc-------chhHHHhcc
Confidence 4799999999999999999999542 664 44566652 111 11111110 0111111 255778888
Q ss_pred CccEEeecCCCCCCCCHHHHHHHHHhCCcEEE-ecCcHHHHHHHHHHHHHHHHh
Q 012947 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLD-ISGEPEFMERMEARYHEKAVE 140 (452)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvD-lsge~~~~~~~~~~~~~~A~~ 140 (452)
.+|+||.+.-|-. ....++.|.+++++.|- .|| |..+..+..++.+++
T Consensus 67 ~~DVvIDfT~p~~--~~~~~~~~~~~g~~~ViGTTG---~~~~~~~~l~~~a~~ 115 (124)
T PF01113_consen 67 EADVVIDFTNPDA--VYDNLEYALKHGVPLVIGTTG---FSDEQIDELEELAKK 115 (124)
T ss_dssp H-SEEEEES-HHH--HHHHHHHHHHHT-EEEEE-SS---SHHHHHHHHHHHTTT
T ss_pred cCCEEEEcCChHH--hHHHHHHHHhCCCCEEEECCC---CCHHHHHHHHHHhcc
Confidence 8999999885432 25789999999998764 444 343333555665555
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0012 Score=66.68 Aligned_cols=137 Identities=12% Similarity=0.018 Sum_probs=81.1
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~--~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
++++|.|+||+|.+|..++-.|+..+-.+.....++++.++++ ++++..+.++......-..-+.... ...+.+
T Consensus 1 ~p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~----~~~~~~ 76 (322)
T cd01338 1 KPVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITD----DPNVAF 76 (322)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEec----CcHHHh
Confidence 3679999999999999999999876631111124799999954 3465555555310000000011111 235678
Q ss_pred cCccEEeecCCCCCCCCH---HHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHH
Q 012947 87 SQTKLLLNCVGPYRLHGD---PVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFN 163 (452)
Q Consensus 87 ~~~dvVIn~aGp~~~~~~---~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~ 163 (452)
+++|+||.+||.....++ .+++.. ...++.+.....+.+...++.|+.+ -|-|+.+|.+
T Consensus 77 ~daDivvitaG~~~k~g~tR~dll~~N-------------~~i~~~i~~~i~~~~~~~~iiivvs-----NPvD~~t~~~ 138 (322)
T cd01338 77 KDADWALLVGAKPRGPGMERADLLKAN-------------GKIFTAQGKALNDVASRDVKVLVVG-----NPCNTNALIA 138 (322)
T ss_pred CCCCEEEEeCCCCCCCCCcHHHHHHHH-------------HHHHHHHHHHHHhhCCCCeEEEEec-----CcHHHHHHHH
Confidence 899999999997654442 222222 2334555454444442244444432 6889999998
Q ss_pred hhhc
Q 012947 164 SRQW 167 (452)
Q Consensus 164 ~~~~ 167 (452)
.+..
T Consensus 139 ~k~s 142 (322)
T cd01338 139 MKNA 142 (322)
T ss_pred HHHc
Confidence 8765
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0023 Score=61.35 Aligned_cols=103 Identities=17% Similarity=0.228 Sum_probs=70.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC-------------------hhHHHHHHHHhCC-CCCCCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASP-SHSLSI 69 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~-------------------~~kl~~l~~~l~~-~~~~~v 69 (452)
+.+|+|.|+ |.+|..+++.|++.|. -++.+++.+ ..|.+.+.+.+.. ....++
T Consensus 21 ~~~VlivG~-GglGs~va~~La~~Gv------g~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i 93 (228)
T cd00757 21 NARVLVVGA-GGLGSPAAEYLAAAGV------GKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEI 93 (228)
T ss_pred CCcEEEECC-CHHHHHHHHHHHHcCC------CEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEE
Confidence 468999997 7899999999999984 356665332 2344444444432 112334
Q ss_pred cEEEEeCCCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEec
Q 012947 70 PILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 70 ~~v~~Dl~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDls 121 (452)
..+..++ +.+.+.+.++++|+||.|..... ....+.+.|.+.++.+|+..
T Consensus 94 ~~~~~~i-~~~~~~~~~~~~DvVi~~~d~~~-~r~~l~~~~~~~~ip~i~~g 143 (228)
T cd00757 94 EAYNERL-DAENAEELIAGYDLVLDCTDNFA-TRYLINDACVKLGKPLVSGA 143 (228)
T ss_pred EEeccee-CHHHHHHHHhCCCEEEEcCCCHH-HHHHHHHHHHHcCCCEEEEE
Confidence 4444455 35678888999999999987442 22457788999999888874
|
Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). |
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0026 Score=60.35 Aligned_cols=105 Identities=13% Similarity=0.122 Sum_probs=69.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh------------------hHHHHHHHHhCC-CCCCCc
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP------------------TRVKQALQWASP-SHSLSI 69 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~------------------~kl~~l~~~l~~-~~~~~v 69 (452)
+..+|+|+|+ |.+|..+++.|++.|. -++.+.+.+. .|.+.+.+.+.. ....++
T Consensus 27 ~~~~V~ViG~-GglGs~ia~~La~~Gv------g~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v 99 (212)
T PRK08644 27 KKAKVGIAGA-GGLGSNIAVALARSGV------GNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEI 99 (212)
T ss_pred hCCCEEEECc-CHHHHHHHHHHHHcCC------CeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEE
Confidence 3467999998 7899999999999984 4688877761 344444444421 112344
Q ss_pred cEEEEeCCCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHh-CCcEEEecC
Q 012947 70 PILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHS-GCDYLDISG 122 (452)
Q Consensus 70 ~~v~~Dl~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~-g~~yvDlsg 122 (452)
..+...+++ +.+.+.++++|+||.|...+.. ...+.+.|.+. ++.+|..++
T Consensus 100 ~~~~~~i~~-~~~~~~~~~~DvVI~a~D~~~~-r~~l~~~~~~~~~~p~I~~~~ 151 (212)
T PRK08644 100 EAHNEKIDE-DNIEELFKDCDIVVEAFDNAET-KAMLVETVLEHPGKKLVAASG 151 (212)
T ss_pred EEEeeecCH-HHHHHHHcCCCEEEECCCCHHH-HHHHHHHHHHhCCCCEEEeeh
Confidence 444445544 5677888999999999643321 23566778777 777776654
|
|
| >TIGR01921 DAP-DH diaminopimelate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.007 Score=60.86 Aligned_cols=121 Identities=17% Similarity=0.212 Sum_probs=77.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEE-EEecCh-hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLA-LAGRNP-TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~-iagR~~-~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
+++|.|+|. |.+|+.+++.+.++.. .+++ +.+|+. +++. +. +... ...| ...+..
T Consensus 3 kIRVgIVG~-GnIGr~~a~al~~~pd------~ELVgV~dr~~~~~~~---~~--------~~v~--~~~d---~~e~l~ 59 (324)
T TIGR01921 3 KIRAAIVGY-GNLGRSVEKAIQQQPD------MELVGVFSRRGAETLD---TE--------TPVY--AVAD---DEKHLD 59 (324)
T ss_pred CcEEEEEee-cHHHHHHHHHHHhCCC------cEEEEEEcCCcHHHHh---hc--------CCcc--ccCC---HHHhcc
Confidence 489999997 9999999999887642 5654 567774 3332 11 1111 1223 333457
Q ss_pred CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcch
Q 012947 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIP 155 (452)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P 155 (452)
++|+|+.|.+.. .+ .+.+..++++|.|.||......-+.+.....++.|++.|..-+.++|+|+.-
T Consensus 60 ~iDVViIctPs~-th-~~~~~~~L~aG~NVV~s~~~h~~~p~~~~~ld~AAk~~g~vsvi~~GwDPG~ 125 (324)
T TIGR01921 60 DVDVLILCMGSA-TD-IPEQAPYFAQFANTVDSFDNHRDIPRHRQVMDAAAKAAGNVSVISTGWDPGM 125 (324)
T ss_pred CCCEEEEcCCCc-cC-HHHHHHHHHcCCCEEECCCcccCCHHHHHHHHHHHHHcCCEEEEECCCCcCh
Confidence 899999997543 33 6888889999999999864211112334556777887544444447887664
|
This model represents the diaminopimelate dehydrogenase enzyme which provides an alternate (shortcut) route of lysine buiosynthesis in Corynebacterium, Bacterioides, Porphyromonas and scattered other species. The enzyme from Corynebacterium glutamicum has been crystallized and characterized. |
| >TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.00071 Score=68.79 Aligned_cols=96 Identities=16% Similarity=0.169 Sum_probs=66.0
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCccE
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKL 91 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~dv 91 (452)
+|.|+||||++|+.+++.|.+++. +..++.++.++.+..+.+. + ........|++ . ..++++|+
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~h----p~~~l~~~as~~~~g~~~~--~-----~~~~~~~~~~~-~----~~~~~~D~ 64 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNF----PIDKLVLLASDRSAGRKVT--F-----KGKELEVNEAK-I----ESFEGIDI 64 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCC----ChhhEEEEeccccCCCeee--e-----CCeeEEEEeCC-h----HHhcCCCE
Confidence 478999999999999999998652 2256666666544332221 1 12456666764 1 23478999
Q ss_pred EeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHH
Q 012947 92 LLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPE 125 (452)
Q Consensus 92 VIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~ 125 (452)
||-|+|.. ....++....+.|+..||+++.+.
T Consensus 65 v~~a~g~~--~s~~~a~~~~~~G~~VID~ss~~R 96 (339)
T TIGR01296 65 ALFSAGGS--VSKEFAPKAAKCGAIVIDNTSAFR 96 (339)
T ss_pred EEECCCHH--HHHHHHHHHHHCCCEEEECCHHHh
Confidence 99999754 335677777788999999997543
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978. |
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0023 Score=66.97 Aligned_cols=86 Identities=16% Similarity=0.297 Sum_probs=59.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh---HHHHH--------HHHhCC---CCCCCccEEEEe
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT---RVKQA--------LQWASP---SHSLSIPILTAD 75 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~---kl~~l--------~~~l~~---~~~~~v~~v~~D 75 (452)
...|+|||||||+|+-+++.|++..|. ..++.+.-|... .-+++ -+.+.. ....++..+.+|
T Consensus 12 ~k~i~vTG~tGFlgKVliEklLr~~p~----v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GD 87 (467)
T KOG1221|consen 12 NKTIFVTGATGFLGKVLIEKLLRTTPD----VKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGD 87 (467)
T ss_pred CCeEEEEcccchhHHHHHHHHHhcCcC----cceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccc
Confidence 457999999999999999999998752 247778777532 11112 122211 123467788888
Q ss_pred CCCH------HHHHHHHcCccEEeecCCCC
Q 012947 76 TTDP------PSLHRLCSQTKLLLNCVGPY 99 (452)
Q Consensus 76 l~d~------~sl~~~~~~~dvVIn~aGp~ 99 (452)
+.++ .+++.+.+++|+|||+|+-.
T Consensus 88 i~~~~LGis~~D~~~l~~eV~ivih~AAtv 117 (467)
T KOG1221|consen 88 ISEPDLGISESDLRTLADEVNIVIHSAATV 117 (467)
T ss_pred ccCcccCCChHHHHHHHhcCCEEEEeeeee
Confidence 8754 55667888999999999753
|
|
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0032 Score=63.21 Aligned_cols=73 Identities=15% Similarity=0.189 Sum_probs=57.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
...+|+|+|+ |-+|+.+++.|...+. .+|.+++|+.++.+++.++++ . ..+ +.+++.+.+.+
T Consensus 177 ~~~~V~ViGa-G~iG~~~a~~L~~~g~------~~V~v~~r~~~ra~~la~~~g----~--~~~-----~~~~~~~~l~~ 238 (311)
T cd05213 177 KGKKVLVIGA-GEMGELAAKHLAAKGV------AEITIANRTYERAEELAKELG----G--NAV-----PLDELLELLNE 238 (311)
T ss_pred cCCEEEEECc-HHHHHHHHHHHHHcCC------CEEEEEeCCHHHHHHHHHHcC----C--eEE-----eHHHHHHHHhc
Confidence 3578999998 9999999999988662 589999999999988888763 1 211 23467788889
Q ss_pred ccEEeecCCCC
Q 012947 89 TKLLLNCVGPY 99 (452)
Q Consensus 89 ~dvVIn~aGp~ 99 (452)
+|+||.+.+..
T Consensus 239 aDvVi~at~~~ 249 (311)
T cd05213 239 ADVVISATGAP 249 (311)
T ss_pred CCEEEECCCCC
Confidence 99999999754
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.002 Score=66.43 Aligned_cols=103 Identities=15% Similarity=0.179 Sum_probs=72.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC-------------------hhHHHHHHHHhCC-CCCCCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASP-SHSLSI 69 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~-------------------~~kl~~l~~~l~~-~~~~~v 69 (452)
..+|+|+|+ |.+|..+++.|++.|. -++.+++++ ..|.+.+.+.+.. ....++
T Consensus 135 ~~~VlvvG~-GG~Gs~ia~~La~~Gv------g~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v 207 (376)
T PRK08762 135 EARVLLIGA-GGLGSPAALYLAAAGV------GTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQV 207 (376)
T ss_pred cCcEEEECC-CHHHHHHHHHHHHcCC------CeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEE
Confidence 467999987 7799999999999994 478888887 4566665555532 111223
Q ss_pred cEEEEeCCCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEec
Q 012947 70 PILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 70 ~~v~~Dl~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDls 121 (452)
..+...++ .+.+.+++++.|+||+|...+.. ...+.++|.+.++.+|+..
T Consensus 208 ~~~~~~~~-~~~~~~~~~~~D~Vv~~~d~~~~-r~~ln~~~~~~~ip~i~~~ 257 (376)
T PRK08762 208 EAVQERVT-SDNVEALLQDVDVVVDGADNFPT-RYLLNDACVKLGKPLVYGA 257 (376)
T ss_pred EEEeccCC-hHHHHHHHhCCCEEEECCCCHHH-HHHHHHHHHHcCCCEEEEE
Confidence 33333343 46778889999999999865432 2457789999999988764
|
|
| >PLN02383 aspartate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0013 Score=66.96 Aligned_cols=98 Identities=15% Similarity=0.067 Sum_probs=63.3
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEe--cChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 012947 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAG--RNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 8 ~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iag--R~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
.++++|.|+||||++|+.+++.|.+++.+ ..++..+. |+..+.-.. .......-+++ ++ .
T Consensus 5 ~~~~kVaVvGAtG~vG~eLlrlL~~~~hP----~~~l~~las~rsaGk~~~~---------~~~~~~v~~~~-~~----~ 66 (344)
T PLN02383 5 ENGPSVAIVGVTGAVGQEFLSVLTDRDFP----YSSLKMLASARSAGKKVTF---------EGRDYTVEELT-ED----S 66 (344)
T ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCC----cceEEEEEccCCCCCeeee---------cCceeEEEeCC-HH----H
Confidence 35689999999999999999999986521 13443332 333322111 11233333443 22 3
Q ss_pred HcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHH
Q 012947 86 CSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPE 125 (452)
Q Consensus 86 ~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~ 125 (452)
++++|+||.++|.- ....++....+.|+..||+++...
T Consensus 67 ~~~~D~vf~a~p~~--~s~~~~~~~~~~g~~VIDlS~~fR 104 (344)
T PLN02383 67 FDGVDIALFSAGGS--ISKKFGPIAVDKGAVVVDNSSAFR 104 (344)
T ss_pred HcCCCEEEECCCcH--HHHHHHHHHHhCCCEEEECCchhh
Confidence 46899999998632 336677777788999999998653
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0022 Score=67.41 Aligned_cols=91 Identities=14% Similarity=0.236 Sum_probs=71.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-HcCc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~-~~~~ 89 (452)
++|+|+|+ |.+|+.+++.|.+.+ .++.+++|++++++++.+. ..+.++.+|.++++.++++ ++++
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g-------~~v~vid~~~~~~~~~~~~------~~~~~~~gd~~~~~~l~~~~~~~a 66 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGEN-------NDVTVIDTDEERLRRLQDR------LDVRTVVGNGSSPDVLREAGAEDA 66 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCC-------CcEEEEECCHHHHHHHHhh------cCEEEEEeCCCCHHHHHHcCCCcC
Confidence 47999998 999999999999987 7899999999998776542 2468889999999999988 8899
Q ss_pred cEEeecCCCCCCCCHHHHHHHHHh-CCc
Q 012947 90 KLLLNCVGPYRLHGDPVAAACVHS-GCD 116 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~~~-g~~ 116 (452)
|.||.+.+-. .....+...|.+. +..
T Consensus 67 ~~vi~~~~~~-~~n~~~~~~~r~~~~~~ 93 (453)
T PRK09496 67 DLLIAVTDSD-ETNMVACQIAKSLFGAP 93 (453)
T ss_pred CEEEEecCCh-HHHHHHHHHHHHhcCCC
Confidence 9999887532 2223344556554 554
|
|
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0026 Score=66.91 Aligned_cols=90 Identities=18% Similarity=0.234 Sum_probs=66.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh-hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~-~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
..+++|+|+++ +|..+++.|++.| ++|.+.+++. +.+++..+++. ...+.++..|..+ +...+
T Consensus 5 ~k~v~iiG~g~-~G~~~A~~l~~~G-------~~V~~~d~~~~~~~~~~~~~l~---~~~~~~~~~~~~~-----~~~~~ 68 (450)
T PRK14106 5 GKKVLVVGAGV-SGLALAKFLKKLG-------AKVILTDEKEEDQLKEALEELG---ELGIELVLGEYPE-----EFLEG 68 (450)
T ss_pred CCEEEEECCCH-HHHHHHHHHHHCC-------CEEEEEeCCchHHHHHHHHHHH---hcCCEEEeCCcch-----hHhhc
Confidence 46899999977 9999999999999 8999999975 45555555552 1246677777765 34567
Q ss_pred ccEEeecCCCCCCCCHHHHHHHHHhCCcE
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDY 117 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~~~g~~y 117 (452)
+|+||+++|.. ...+++.+|.+.|+..
T Consensus 69 ~d~vv~~~g~~--~~~~~~~~a~~~~i~~ 95 (450)
T PRK14106 69 VDLVVVSPGVP--LDSPPVVQAHKKGIEV 95 (450)
T ss_pred CCEEEECCCCC--CCCHHHHHHHHCCCcE
Confidence 99999999864 2346777777766543
|
|
| >PRK05442 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0019 Score=65.23 Aligned_cols=138 Identities=13% Similarity=0.036 Sum_probs=79.4
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh--hHHHHHHHHhCC---CCCCCccEEEEeCCCHHHH
Q 012947 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASP---SHSLSIPILTADTTDPPSL 82 (452)
Q Consensus 8 ~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~--~kl~~l~~~l~~---~~~~~v~~v~~Dl~d~~sl 82 (452)
.++.+|.|+||+|.+|..++-.|+..+-.+.....++.+.++++ ++++....++.. +...++. + . ...
T Consensus 2 ~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~-i----~--~~~ 74 (326)
T PRK05442 2 KAPVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVV-I----T--DDP 74 (326)
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcE-E----e--cCh
Confidence 46779999999999999999988876521100113799999854 445555544431 0001121 1 1 123
Q ss_pred HHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHH
Q 012947 83 HRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMF 162 (452)
Q Consensus 83 ~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~ 162 (452)
.+.++++|+||-+||.....++.=.+.... ....++.+.....+.+...++.|+-+ -|-|+.+|.
T Consensus 75 y~~~~daDiVVitaG~~~k~g~tR~dll~~----------Na~i~~~i~~~i~~~~~~~~iiivvs-----NPvDv~t~v 139 (326)
T PRK05442 75 NVAFKDADVALLVGARPRGPGMERKDLLEA----------NGAIFTAQGKALNEVAARDVKVLVVG-----NPANTNALI 139 (326)
T ss_pred HHHhCCCCEEEEeCCCCCCCCCcHHHHHHH----------HHHHHHHHHHHHHHhCCCCeEEEEeC-----CchHHHHHH
Confidence 567889999999999655444211111111 12234444443333332344444433 688999999
Q ss_pred Hhhhc
Q 012947 163 NSRQW 167 (452)
Q Consensus 163 ~~~~~ 167 (452)
+.+..
T Consensus 140 ~~k~s 144 (326)
T PRK05442 140 AMKNA 144 (326)
T ss_pred HHHHc
Confidence 88765
|
|
| >PRK12550 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.002 Score=63.42 Aligned_cols=123 Identities=15% Similarity=0.101 Sum_probs=79.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
.+++|+|| |+.+++++-.|++.+. .++.|+.|+.++.+++.+.+. . +.. +.+. ..++|
T Consensus 123 ~~vlilGa-GGaarAi~~aL~~~g~------~~i~i~nR~~~~a~~la~~~~------~-----~~~--~~~~--~~~~d 180 (272)
T PRK12550 123 LVVALRGS-GGMAKAVAAALRDAGF------TDGTIVARNEKTGKALAELYG------Y-----EWR--PDLG--GIEAD 180 (272)
T ss_pred CeEEEECC-cHHHHHHHHHHHHCCC------CEEEEEeCCHHHHHHHHHHhC------C-----cch--hhcc--cccCC
Confidence 47999997 8899999999999883 479999999999988887652 1 111 1111 24589
Q ss_pred EEeecCCCCCCC-----CHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhh
Q 012947 91 LLLNCVGPYRLH-----GDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSR 165 (452)
Q Consensus 91 vVIn~aGp~~~~-----~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~ 165 (452)
+||||....... ..++-...+....-.+|+...+.-+. +-+.|++.|..++++. +|..+-+..
T Consensus 181 lvINaTp~Gm~~~~~~~~~pi~~~~l~~~~~v~D~vY~P~~T~-----ll~~A~~~G~~~i~Gl-------~MLi~Qa~~ 248 (272)
T PRK12550 181 ILVNVTPIGMAGGPEADKLAFPEAEIDAASVVFDVVALPAETP-----LIRYARARGKTVITGA-------EVIALQAVE 248 (272)
T ss_pred EEEECCccccCCCCccccCCCCHHHcCCCCEEEEeecCCccCH-----HHHHHHHCcCeEeCCH-------HHHHHHHHH
Confidence 999996322111 11333333444556788887654322 3356788898887553 455555555
Q ss_pred hc
Q 012947 166 QW 167 (452)
Q Consensus 166 ~~ 167 (452)
.+
T Consensus 249 ~f 250 (272)
T PRK12550 249 QF 250 (272)
T ss_pred HH
Confidence 44
|
|
| >COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0039 Score=60.33 Aligned_cols=218 Identities=18% Similarity=0.143 Sum_probs=111.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEE-EEEecChhHH-HHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRV-KQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v-~iagR~~~kl-~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
.++|.|.||+|-+|+.+++.+.+... +++ ....|..+.. ..-..++. ....+.+. +.| ++.....
T Consensus 2 ~iki~V~Ga~GRMG~~ii~~v~~~~~------~~L~aa~~~~~~~~~g~d~ge~~--g~~~~gv~---v~~--~~~~~~~ 68 (266)
T COG0289 2 MIKVAVAGASGRMGRTLIRAVLEAPD------LELVAAFDRPGSLSLGSDAGELA--GLGLLGVP---VTD--DLLLVKA 68 (266)
T ss_pred CceEEEEcCCChHHHHHHHHHhcCCC------ceEEEEEecCCccccccchhhhc--cccccCce---eec--chhhccc
Confidence 37899999999999999999987752 454 4456654322 00001110 00112222 112 1556667
Q ss_pred CccEEeecCCCCCCCCHHHHHHHHHhCCc-EEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHH---HH
Q 012947 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCD-YLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVM---FN 163 (452)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~ac~~~g~~-yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~---~~ 163 (452)
++||||...-|-. ....++.|.++++. .|=.|| |..+-.+.+.+.+++-++.+ +.-| |+=-.+... .+
T Consensus 69 ~~DV~IDFT~P~~--~~~~l~~~~~~~~~lVIGTTG---f~~e~~~~l~~~a~~v~vv~--a~Nf-SiGvnll~~l~~~a 140 (266)
T COG0289 69 DADVLIDFTTPEA--TLENLEFALEHGKPLVIGTTG---FTEEQLEKLREAAEKVPVVI--APNF-SLGVNLLFKLAEQA 140 (266)
T ss_pred CCCEEEECCCchh--hHHHHHHHHHcCCCeEEECCC---CCHHHHHHHHHHHhhCCEEE--eccc-hHHHHHHHHHHHHH
Confidence 8999999987743 36789999999986 555555 44444455666666644333 3333 221122222 23
Q ss_pred hhhcCCCCCcceEEEEEEec-cCCccccccccHHHHHHhHhcchhhHHHHhcCCCCCCCCCCCCCCCC---CCccccccc
Q 012947 164 SRQWIPPAVPNQIEAYVSLE-SDKRIVGNFGTYESAVLGVANAQELQKLRRSRPRRARPVIPGPAPLR---GPLVESQKR 239 (452)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~GT~~S~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 239 (452)
++.|. .++.+-+|+-.+-+ ..++ ||.-.+...+++... ..+.+. .-+.+....+++.+. ...++-...
T Consensus 141 ak~l~-~~DiEIiE~HHr~K~DAPS-----GTAl~lae~ia~~~~-~~~~~~-~v~~r~G~~g~r~~~~Igi~svR~G~i 212 (266)
T COG0289 141 AKVLD-DYDIEIIEAHHRHKKDAPS-----GTALKLAEAIAEARG-QDLKDE-AVYGREGATGARKEGEIGIHSVRGGDI 212 (266)
T ss_pred HHhcC-CCCEEehhhhcccCCCCCc-----HHHHHHHHHHHHhhc-cccccc-eeecccCCcCCCCCCCceeEEeecCCc
Confidence 34443 33444455433322 2222 777765555554321 000000 001111111221110 112344455
Q ss_pred cCeEEEeCCCCchhhhh
Q 012947 240 IGLWAIKLPSADATVVR 256 (452)
Q Consensus 240 ~~~~~~~f~~~d~~vV~ 256 (452)
.+...+-|.+.+++|.-
T Consensus 213 vG~H~V~F~~~GE~iei 229 (266)
T COG0289 213 VGEHEVIFAGEGERIEI 229 (266)
T ss_pred ceeEEEEEecCCcEEEE
Confidence 67788888877777643
|
|
| >cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0041 Score=54.91 Aligned_cols=103 Identities=13% Similarity=0.231 Sum_probs=68.7
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC-------------------hhHHHHHHHHhCC-CCCCCccE
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASP-SHSLSIPI 71 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~-------------------~~kl~~l~~~l~~-~~~~~v~~ 71 (452)
+|+|+|+ |.+|..+++.|++.|. -++.+++.+ ..|.+.+.+.+.. ....++..
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv------~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~ 73 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGV------GKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTA 73 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCC------CEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEE
Confidence 4899998 8899999999999983 367777644 1234444444322 11223344
Q ss_pred EEEeCCCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCc
Q 012947 72 LTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGE 123 (452)
Q Consensus 72 v~~Dl~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge 123 (452)
+..++.+ +...+.+++.|+||.|...+. ....+.+.|.+.++.+|+....
T Consensus 74 ~~~~~~~-~~~~~~~~~~diVi~~~d~~~-~~~~l~~~~~~~~i~~i~~~~~ 123 (143)
T cd01483 74 VPEGISE-DNLDDFLDGVDLVIDAIDNIA-VRRALNRACKELGIPVIDAGGL 123 (143)
T ss_pred EeeecCh-hhHHHHhcCCCEEEECCCCHH-HHHHHHHHHHHcCCCEEEEcCC
Confidence 4444443 334677889999999987532 2356788999999998887653
|
This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. |
| >PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0016 Score=66.55 Aligned_cols=103 Identities=14% Similarity=0.135 Sum_probs=64.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC-C----CCCCccEEEEeCCCHHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-S----HSLSIPILTADTTDPPSLHR 84 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~-~----~~~~v~~v~~Dl~d~~sl~~ 84 (452)
.++|.|+||||++|+.+++.|.++.. .++..+.++.++..+....+-. . ......-+.+...+++.
T Consensus 3 ~~~V~I~GatG~iG~~l~~~L~~~p~------~el~~~~~s~~~~G~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--- 73 (349)
T PRK08664 3 KLKVGILGATGMVGQRFVQLLANHPW------FEVTALAASERSAGKTYGEAVRWQLDGPIPEEVADMEVVSTDPEA--- 73 (349)
T ss_pred CcEEEEECCCCHHHHHHHHHHHcCCC------ceEEEEEcChhhcCCcccccccccccccccccccceEEEeCCHHH---
Confidence 37899999999999999999997652 6777776665443222211100 0 00001112222234443
Q ss_pred HHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcH
Q 012947 85 LCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEP 124 (452)
Q Consensus 85 ~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~ 124 (452)
+.++|+|+.+.+.. ....+++.+.+.|+..||++++.
T Consensus 74 -~~~~DvVf~a~p~~--~s~~~~~~~~~~G~~vIDls~~f 110 (349)
T PRK08664 74 -VDDVDIVFSALPSD--VAGEVEEEFAKAGKPVFSNASAH 110 (349)
T ss_pred -hcCCCEEEEeCChh--HHHHHHHHHHHCCCEEEECCchh
Confidence 35899999887532 23567788888999999999854
|
|
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0062 Score=49.66 Aligned_cols=91 Identities=15% Similarity=0.217 Sum_probs=60.9
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEE-ecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~ia-gR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
+|.|+| +|.+|..+++.|++.+. ...++.+. .|++++++++.+++. +.+... +..++++.+|
T Consensus 1 kI~iIG-~G~mg~al~~~l~~~g~----~~~~v~~~~~r~~~~~~~~~~~~~------~~~~~~------~~~~~~~~ad 63 (96)
T PF03807_consen 1 KIGIIG-AGNMGSALARGLLASGI----KPHEVIIVSSRSPEKAAELAKEYG------VQATAD------DNEEAAQEAD 63 (96)
T ss_dssp EEEEES-TSHHHHHHHHHHHHTTS-----GGEEEEEEESSHHHHHHHHHHCT------TEEESE------EHHHHHHHTS
T ss_pred CEEEEC-CCHHHHHHHHHHHHCCC----CceeEEeeccCcHHHHHHHHHhhc------cccccC------ChHHhhccCC
Confidence 577885 59999999999999972 11688855 999999999988762 222221 2456667899
Q ss_pred EEeecCCCCCCCCHHHHHHH--HHhCCcEEEec
Q 012947 91 LLLNCVGPYRLHGDPVAAAC--VHSGCDYLDIS 121 (452)
Q Consensus 91 vVIn~aGp~~~~~~~vv~ac--~~~g~~yvDls 121 (452)
+||.|+-|... ..+++.. ...+..+||+.
T Consensus 64 vvilav~p~~~--~~v~~~i~~~~~~~~vis~~ 94 (96)
T PF03807_consen 64 VVILAVKPQQL--PEVLSEIPHLLKGKLVISIA 94 (96)
T ss_dssp EEEE-S-GGGH--HHHHHHHHHHHTTSEEEEES
T ss_pred EEEEEECHHHH--HHHHHHHhhccCCCEEEEeC
Confidence 99999966543 2344333 44556677764
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0062 Score=61.02 Aligned_cols=127 Identities=16% Similarity=0.201 Sum_probs=78.7
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC--C-CCCCccEEEEeCCCHHHHHHHHcC
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--S-HSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~--~-~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
+|.|+|+ |.+|+.++..|+..+.. .++.+.+|+.++++.+..++.. . ......+. ..+.+ .+++
T Consensus 2 kI~IIGa-G~vG~~~a~~l~~~g~~-----~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~---~~~~~----~l~~ 68 (306)
T cd05291 2 KVVIIGA-GHVGSSFAYSLVNQGIA-----DELVLIDINEEKAEGEALDLEDALAFLPSPVKIK---AGDYS----DCKD 68 (306)
T ss_pred EEEEECC-CHHHHHHHHHHHhcCCC-----CEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE---cCCHH----HhCC
Confidence 6899997 89999999999988731 3899999999998888776632 0 01111222 22322 3689
Q ss_pred ccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhhc
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQW 167 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~~ 167 (452)
+|+||+++|.....++.=.+.... ....++.+.....+.+. .++.|+- +-|-|+.++.+.+..
T Consensus 69 aDIVIitag~~~~~g~~R~dll~~----------N~~i~~~~~~~i~~~~~-~~~vivv-----sNP~d~~~~~~~~~~ 131 (306)
T cd05291 69 ADIVVITAGAPQKPGETRLDLLEK----------NAKIMKSIVPKIKASGF-DGIFLVA-----SNPVDVITYVVQKLS 131 (306)
T ss_pred CCEEEEccCCCCCCCCCHHHHHHH----------HHHHHHHHHHHHHHhCC-CeEEEEe-----cChHHHHHHHHHHHh
Confidence 999999999654443211111111 23344554444444333 3333332 368899999888863
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >PRK08223 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0029 Score=62.56 Aligned_cols=104 Identities=14% Similarity=0.123 Sum_probs=68.3
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC-------------------hhHHHHHHHHhCC-CCCCC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASP-SHSLS 68 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~-------------------~~kl~~l~~~l~~-~~~~~ 68 (452)
++-+|+|.|+ |++|..++++|++.|. -++.+++.+ ..|.+.+.+.+.. ....+
T Consensus 26 ~~s~VlIvG~-GGLGs~va~~LA~aGV------G~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~ 98 (287)
T PRK08223 26 RNSRVAIAGL-GGVGGIHLLTLARLGI------GKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELE 98 (287)
T ss_pred hcCCEEEECC-CHHHHHHHHHHHHhCC------CeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCE
Confidence 3467999998 7789999999999984 466666654 1233333333321 11233
Q ss_pred ccEEEEeCCCHHHHHHHHcCccEEeecCCCCC-CCCHHHHHHHHHhCCcEEEe
Q 012947 69 IPILTADTTDPPSLHRLCSQTKLLLNCVGPYR-LHGDPVAAACVHSGCDYLDI 120 (452)
Q Consensus 69 v~~v~~Dl~d~~sl~~~~~~~dvVIn~aGp~~-~~~~~vv~ac~~~g~~yvDl 120 (452)
+..+...++ ++.+.++++++|+||++.-.+. ..-..+.++|.+.++.+|..
T Consensus 99 V~~~~~~l~-~~n~~~ll~~~DlVvD~~D~~~~~~r~~ln~~c~~~~iP~V~~ 150 (287)
T PRK08223 99 IRAFPEGIG-KENADAFLDGVDVYVDGLDFFEFDARRLVFAACQQRGIPALTA 150 (287)
T ss_pred EEEEecccC-ccCHHHHHhCCCEEEECCCCCcHHHHHHHHHHHHHcCCCEEEE
Confidence 444444454 4567888999999999875431 12256778999998888765
|
|
| >TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.00082 Score=67.04 Aligned_cols=83 Identities=14% Similarity=0.122 Sum_probs=58.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
++|.|.|||||+|..+++.|.++.. .++..+.-+.. + +..+ .+++++++|
T Consensus 2 ~~v~IvGasGy~G~el~rlL~~HP~------~el~~l~s~~~--------~-------------~~~~---~~~~~~~~D 51 (310)
T TIGR01851 2 PKVFIDGEAGTTGLQIRERLSGRDD------IELLSIAPDRR--------K-------------DAAE---RAKLLNAAD 51 (310)
T ss_pred CeEEEECCCChhHHHHHHHHhCCCC------eEEEEEecccc--------c-------------CcCC---HhHhhcCCC
Confidence 6899999999999999999999863 56554432211 1 0111 345667899
Q ss_pred EEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHH
Q 012947 91 LLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPE 125 (452)
Q Consensus 91 vVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~ 125 (452)
+||.+++.- ....++....+.|+..||+++...
T Consensus 52 ~vFlalp~~--~s~~~~~~~~~~g~~VIDlSadfR 84 (310)
T TIGR01851 52 VAILCLPDD--AAREAVSLVDNPNTCIIDASTAYR 84 (310)
T ss_pred EEEECCCHH--HHHHHHHHHHhCCCEEEECChHHh
Confidence 999988422 235667777788999999998653
|
This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment. |
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0044 Score=56.88 Aligned_cols=100 Identities=13% Similarity=0.078 Sum_probs=61.3
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh------------------hHHHHHHHHhCC-CCCCCccEE
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP------------------TRVKQALQWASP-SHSLSIPIL 72 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~------------------~kl~~l~~~l~~-~~~~~v~~v 72 (452)
+|+|+|+ |.+|..+++.|++.|. -++.+.+.+. .|.+.+.+.+.. ....++..+
T Consensus 1 ~VlViG~-GglGs~ia~~La~~Gv------g~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~ 73 (174)
T cd01487 1 KVGIAGA-GGLGSNIAVLLARSGV------GNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAI 73 (174)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCC------CeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEE
Confidence 4899997 7899999999999983 4688888764 233333333321 112234444
Q ss_pred EEeCCCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHh-CCcEEEe
Q 012947 73 TADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHS-GCDYLDI 120 (452)
Q Consensus 73 ~~Dl~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~-g~~yvDl 120 (452)
...++ .+.+.+.++++|+||.|....... ..+.+.|.+. ++.+|.-
T Consensus 74 ~~~~~-~~~~~~~l~~~DlVi~~~d~~~~r-~~i~~~~~~~~~ip~i~~ 120 (174)
T cd01487 74 NIKID-ENNLEGLFGDCDIVVEAFDNAETK-AMLAESLLGNKNKPVVCA 120 (174)
T ss_pred EeecC-hhhHHHHhcCCCEEEECCCCHHHH-HHHHHHHHHHCCCCEEEE
Confidence 44454 366778888999999886432211 2344555554 5555543
|
Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.002 Score=66.88 Aligned_cols=73 Identities=14% Similarity=0.112 Sum_probs=57.7
Q ss_pred CCCeEEEEcC----------------CchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEE
Q 012947 9 ELFDVIILGA----------------SGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPIL 72 (452)
Q Consensus 9 ~~~~ilV~GA----------------TG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v 72 (452)
+..+++|+|| ||.+|.+++++|+++| ++|.+++++.+ ++ . .. .+.
T Consensus 187 ~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~G-------a~V~~v~~~~~-~~-----~----~~--~~~ 247 (399)
T PRK05579 187 AGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRG-------ADVTLVSGPVN-LP-----T----PA--GVK 247 (399)
T ss_pred CCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCC-------CEEEEeCCCcc-cc-----C----CC--CcE
Confidence 3468999999 8999999999999999 89999998762 21 1 11 245
Q ss_pred EEeCCCHHHHHHHHc----CccEEeecCCCCC
Q 012947 73 TADTTDPPSLHRLCS----QTKLLLNCVGPYR 100 (452)
Q Consensus 73 ~~Dl~d~~sl~~~~~----~~dvVIn~aGp~~ 100 (452)
.+|+++.+++.+.+. +.|++|||||...
T Consensus 248 ~~dv~~~~~~~~~v~~~~~~~DilI~~Aav~d 279 (399)
T PRK05579 248 RIDVESAQEMLDAVLAALPQADIFIMAAAVAD 279 (399)
T ss_pred EEccCCHHHHHHHHHHhcCCCCEEEEcccccc
Confidence 679999888877764 5899999999743
|
|
| >TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0022 Score=65.24 Aligned_cols=102 Identities=15% Similarity=0.166 Sum_probs=61.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh-hHHHHHHHHhCC--C--CCCCcc-EEEEeCCCHHHHHH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-TRVKQALQWASP--S--HSLSIP-ILTADTTDPPSLHR 84 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~-~kl~~l~~~l~~--~--~~~~v~-~v~~Dl~d~~sl~~ 84 (452)
++|.|+||||++|+.+++.|..+.. .++..+.++. +..+.+.+.... . ....+. ...-++ +++
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~~~------~~l~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---- 69 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKHPY------FELAKVVASPRSAGKRYGEAVKWIEPGDMPEYVRDLPIVEP-EPV---- 69 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC------ceEEEEEEChhhcCCcchhhccccccCCCccccceeEEEeC-CHH----
Confidence 4799999999999999999988752 5666553333 221111111100 0 000011 111122 222
Q ss_pred HHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHH
Q 012947 85 LCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPE 125 (452)
Q Consensus 85 ~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~ 125 (452)
...++|+|+.+.+.. ....+++.+.+.|++.||++|+..
T Consensus 70 ~~~~~DvVf~a~p~~--~s~~~~~~~~~~G~~VIDlsg~fR 108 (341)
T TIGR00978 70 ASKDVDIVFSALPSE--VAEEVEPKLAEAGKPVFSNASNHR 108 (341)
T ss_pred HhccCCEEEEeCCHH--HHHHHHHHHHHCCCEEEECChhhc
Confidence 346899999998543 225677888899999999998743
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan. |
| >PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0028 Score=68.23 Aligned_cols=127 Identities=19% Similarity=0.164 Sum_probs=82.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH-HHcC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHR-LCSQ 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~-~~~~ 88 (452)
..+++|+|| |++|+.++..|++.| .+|.++.|+.++++++.+++. . .. .+..+ +.+ ....
T Consensus 379 ~k~vlIlGa-GGagrAia~~L~~~G-------~~V~i~nR~~e~a~~la~~l~----~--~~--~~~~~---~~~~~~~~ 439 (529)
T PLN02520 379 GKLFVVIGA-GGAGKALAYGAKEKG-------ARVVIANRTYERAKELADAVG----G--QA--LTLAD---LENFHPEE 439 (529)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCC-------CEEEEEcCCHHHHHHHHHHhC----C--ce--eeHhH---hhhhcccc
Confidence 457999999 799999999999998 789999999999988887652 1 11 12222 222 2235
Q ss_pred ccEEeecCCCCCCC---CHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhh
Q 012947 89 TKLLLNCVGPYRLH---GDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSR 165 (452)
Q Consensus 89 ~dvVIn~aGp~~~~---~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~ 165 (452)
.|+||||...-... ..++-...+....-.+|+...+.-+. +-+.|++.|+.++++. +|.++-+..
T Consensus 440 ~diiINtT~vGm~~~~~~~pl~~~~l~~~~~v~D~vY~P~~T~-----ll~~A~~~G~~~~~Gl-------~MLv~Qa~~ 507 (529)
T PLN02520 440 GMILANTTSVGMQPNVDETPISKHALKHYSLVFDAVYTPKITR-----LLREAEESGAIIVSGT-------EMFIRQAYE 507 (529)
T ss_pred CeEEEecccCCCCCCCCCCcccHhhCCCCCEEEEeccCCCcCH-----HHHHHHHCCCeEeCcH-------HHHHHHHHH
Confidence 79999987543221 12333333444556889887664322 3356777888777553 455555555
Q ss_pred hc
Q 012947 166 QW 167 (452)
Q Consensus 166 ~~ 167 (452)
++
T Consensus 508 ~f 509 (529)
T PLN02520 508 QF 509 (529)
T ss_pred HH
Confidence 44
|
|
| >COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0077 Score=56.89 Aligned_cols=116 Identities=17% Similarity=0.226 Sum_probs=77.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
++|.|+|. |.||+.+++.+... +-+ .-.+++.+|+.+|..++.+.+.. ++. .++++++...|
T Consensus 1 l~vgiVGc-GaIG~~l~e~v~~~-~~~---~e~v~v~D~~~ek~~~~~~~~~~----------~~~---s~ide~~~~~D 62 (255)
T COG1712 1 LKVGIVGC-GAIGKFLLELVRDG-RVD---FELVAVYDRDEEKAKELEASVGR----------RCV---SDIDELIAEVD 62 (255)
T ss_pred CeEEEEec-cHHHHHHHHHHhcC-Ccc---eeEEEEecCCHHHHHHHHhhcCC----------Ccc---ccHHHHhhccc
Confidence 36788886 99999999987643 211 13578889999999888775531 112 33666678999
Q ss_pred EEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEE
Q 012947 91 LLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLV 146 (452)
Q Consensus 91 vVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv 146 (452)
+||-||++-.. ...+...+++|.|++-+|--...-+.+..++.+.|+..+..|-
T Consensus 63 lvVEaAS~~Av--~e~~~~~L~~g~d~iV~SVGALad~~l~erl~~lak~~~~rv~ 116 (255)
T COG1712 63 LVVEAASPEAV--REYVPKILKAGIDVIVMSVGALADEGLRERLRELAKCGGARVY 116 (255)
T ss_pred eeeeeCCHHHH--HHHhHHHHhcCCCEEEEechhccChHHHHHHHHHHhcCCcEEE
Confidence 99999986432 3455666778888777663222223344556677777777654
|
|
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0064 Score=60.67 Aligned_cols=114 Identities=17% Similarity=0.225 Sum_probs=73.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
...+++|+|+ |.+|+.+++.|.+.| .+|.+.+|+.++.+.. +.++ ...+ +.+++.+.+++
T Consensus 151 ~g~kvlViG~-G~iG~~~a~~L~~~G-------a~V~v~~r~~~~~~~~-~~~G------~~~~-----~~~~l~~~l~~ 210 (296)
T PRK08306 151 HGSNVLVLGF-GRTGMTLARTLKALG-------ANVTVGARKSAHLARI-TEMG------LSPF-----HLSELAEEVGK 210 (296)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHH-HHcC------Ceee-----cHHHHHHHhCC
Confidence 3578999997 789999999999988 7999999998876543 3332 1221 23567888899
Q ss_pred ccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCC
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACG 150 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G 150 (452)
+|+|||++.+.. .....++. ...+...||+...+.-+. + +.+++.|+.++...|
T Consensus 211 aDiVI~t~p~~~-i~~~~l~~-~~~g~vIIDla~~pggtd-----~-~~a~~~Gv~~~~~~~ 264 (296)
T PRK08306 211 IDIIFNTIPALV-LTKEVLSK-MPPEALIIDLASKPGGTD-----F-EYAEKRGIKALLAPG 264 (296)
T ss_pred CCEEEECCChhh-hhHHHHHc-CCCCcEEEEEccCCCCcC-----e-eehhhCCeEEEEECC
Confidence 999999984321 11112111 234556888876543221 2 345667777764433
|
|
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0053 Score=59.54 Aligned_cols=103 Identities=17% Similarity=0.188 Sum_probs=68.5
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh-------------------hHHHHHHHHhCC-CCCCC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-------------------TRVKQALQWASP-SHSLS 68 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~-------------------~kl~~l~~~l~~-~~~~~ 68 (452)
++.+|+|+|+ |.+|..++++|++.|- -++.+++.+. .|.+.+.+.+.. ....+
T Consensus 31 ~~~~VliiG~-GglGs~va~~La~~Gv------g~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~ 103 (245)
T PRK05690 31 KAARVLVVGL-GGLGCAASQYLAAAGV------GTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIA 103 (245)
T ss_pred cCCeEEEECC-CHHHHHHHHHHHHcCC------CEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCE
Confidence 3568999999 8899999999999984 4677765531 244444443322 11223
Q ss_pred ccEEEEeCCCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEe
Q 012947 69 IPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDI 120 (452)
Q Consensus 69 v~~v~~Dl~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDl 120 (452)
+..+...++ ++.+.+.++++|+||.|...+.. -..+.++|.+.++.+|+.
T Consensus 104 i~~~~~~i~-~~~~~~~~~~~DiVi~~~D~~~~-r~~ln~~~~~~~ip~v~~ 153 (245)
T PRK05690 104 IETINARLD-DDELAALIAGHDLVLDCTDNVAT-RNQLNRACFAAKKPLVSG 153 (245)
T ss_pred EEEEeccCC-HHHHHHHHhcCCEEEecCCCHHH-HHHHHHHHHHhCCEEEEe
Confidence 444444443 46677888999999999864432 245778888888887764
|
|
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0043 Score=60.02 Aligned_cols=103 Identities=16% Similarity=0.215 Sum_probs=66.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh-------------------hHHHHHHHHhCC-CCCCCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-------------------TRVKQALQWASP-SHSLSI 69 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~-------------------~kl~~l~~~l~~-~~~~~v 69 (452)
..+|+|.|+ |.+|..++++|++.|. -++.+++.+. .|.+.+.+.+.. ....++
T Consensus 24 ~~~VlvvG~-GglGs~va~~La~~Gv------g~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i 96 (240)
T TIGR02355 24 ASRVLIVGL-GGLGCAASQYLAAAGV------GNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAI 96 (240)
T ss_pred CCcEEEECc-CHHHHHHHHHHHHcCC------CEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEE
Confidence 467999998 7899999999999984 4666666542 233333333321 112233
Q ss_pred cEEEEeCCCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEec
Q 012947 70 PILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 70 ~~v~~Dl~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDls 121 (452)
..+...+ +.+.+.+++++.|+||.|...+.. ...+.++|.+.++.+|.-+
T Consensus 97 ~~~~~~i-~~~~~~~~~~~~DlVvd~~D~~~~-r~~ln~~~~~~~ip~v~~~ 146 (240)
T TIGR02355 97 NPINAKL-DDAELAALIAEHDIVVDCTDNVEV-RNQLNRQCFAAKVPLVSGA 146 (240)
T ss_pred EEEeccC-CHHHHHHHhhcCCEEEEcCCCHHH-HHHHHHHHHHcCCCEEEEE
Confidence 3333333 346678888999999999865432 2457788888888888754
|
This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899). |
| >PRK13303 L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0075 Score=59.18 Aligned_cols=122 Identities=16% Similarity=0.147 Sum_probs=75.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
++|.|+|. |.+|+.+++.|.+... .++..+.....+.+...+.+. ..+. . .+|.+++ -.++|
T Consensus 2 ~rVgIiG~-G~iG~~~~~~l~~~~~------~~l~~v~~~~~~~~~~~~~~~----~~~~--~--~~d~~~l---~~~~D 63 (265)
T PRK13303 2 MKVAMIGF-GAIGAAVLELLEHDPD------LRVDWVIVPEHSIDAVRRALG----EAVR--V--VSSVDAL---PQRPD 63 (265)
T ss_pred cEEEEECC-CHHHHHHHHHHhhCCC------ceEEEEEEcCCCHHHHhhhhc----cCCe--e--eCCHHHh---ccCCC
Confidence 68999999 9999999999987642 444333322222222222221 1111 1 2344444 35799
Q ss_pred EEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCC
Q 012947 91 LLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFD 152 (452)
Q Consensus 91 vVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~ 152 (452)
+||.|+++... ..++..|+++|.|.+-.+....-.......+.+.|+++|+.+....|+.
T Consensus 64 vVve~t~~~~~--~e~~~~aL~aGk~Vvi~s~~Al~d~~~~~~L~~~A~~~g~~l~v~sga~ 123 (265)
T PRK13303 64 LVVECAGHAAL--KEHVVPILKAGIDCAVISVGALADEALRERLEQAAEAGGARLHLLSGAI 123 (265)
T ss_pred EEEECCCHHHH--HHHHHHHHHcCCCEEEeChHHhcCHHHHHHHHHHHHHCCCEEEEeChHh
Confidence 99999987533 5789999999999886553211113333556778888888766555554
|
|
| >cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0035 Score=61.36 Aligned_cols=131 Identities=11% Similarity=0.050 Sum_probs=79.5
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCC--CccEEEEeCCCHHHHHHHHcCcc
Q 012947 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSL--SIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 13 ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~--~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
|.|+||+|.+|..++..|+..+. . ...++.+.++++++++....++..-... ...+. . ..++.+.++++|
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~-~--~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~---~--~~d~~~~~~~aD 72 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSV-L--LAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVS---I--TDDPYEAFKDAD 72 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCC-C--cceEEEEEeCCcccchHHHHHHHHhhhhccCcEEE---E--CCchHHHhCCCC
Confidence 57999999999999999998761 0 1158999999998888777766420001 11111 1 123567789999
Q ss_pred EEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhhc
Q 012947 91 LLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQW 167 (452)
Q Consensus 91 vVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~~ 167 (452)
+||.++|.-...|..=.+...+ ....++.+.....+.+ ..+..|+ . +-|.|+.++.+.+..
T Consensus 73 iVv~t~~~~~~~g~~r~~~~~~----------n~~i~~~i~~~i~~~~-p~a~~i~-~----tNP~d~~t~~~~~~s 133 (263)
T cd00650 73 VVIITAGVGRKPGMGRLDLLKR----------NVPIVKEIGDNIEKYS-PDAWIIV-V----SNPVDIITYLVWRYS 133 (263)
T ss_pred EEEECCCCCCCcCCCHHHHHHH----------HHHHHHHHHHHHHHHC-CCeEEEE-e----cCcHHHHHHHHHHHh
Confidence 9999998654433211111111 2334444444444444 2233333 2 368888888887774
|
Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains |
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0052 Score=62.89 Aligned_cols=104 Identities=11% Similarity=0.025 Sum_probs=71.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh-------------------hHHHHHHHHhCC-CCCCC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-------------------TRVKQALQWASP-SHSLS 68 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~-------------------~kl~~l~~~l~~-~~~~~ 68 (452)
+..+|+|+|+ |.+|..++++|++.|. -++.+++.+. .|.+.+.+.+.. ....+
T Consensus 27 ~~~~VlivG~-GGlGs~~a~~La~~Gv------g~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~ 99 (355)
T PRK05597 27 FDAKVAVIGA-GGLGSPALLYLAGAGV------GHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVK 99 (355)
T ss_pred hCCeEEEECC-CHHHHHHHHHHHHcCC------CeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcE
Confidence 3468999998 7899999999999984 4777777653 355555554432 12234
Q ss_pred ccEEEEeCCCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEec
Q 012947 69 IPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 69 v~~v~~Dl~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDls 121 (452)
+..+...++ .+.+.++++++|+||.|..-+.. ...+.++|.+.++.+|...
T Consensus 100 v~~~~~~i~-~~~~~~~~~~~DvVvd~~d~~~~-r~~~n~~c~~~~ip~v~~~ 150 (355)
T PRK05597 100 VTVSVRRLT-WSNALDELRDADVILDGSDNFDT-RHLASWAAARLGIPHVWAS 150 (355)
T ss_pred EEEEEeecC-HHHHHHHHhCCCEEEECCCCHHH-HHHHHHHHHHcCCCEEEEE
Confidence 444445554 46677888999999999864422 1456788999888877654
|
|
| >PRK06223 malate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0043 Score=62.04 Aligned_cols=129 Identities=12% Similarity=0.044 Sum_probs=77.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCC-CCCCc-cEEEEeCCCHHHHHHHHcC
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSI-PILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~-~~~~v-~~v~~Dl~d~~sl~~~~~~ 88 (452)
++|.|+|| |.+|..++..++..+. .++.+.++++++++....++... ..... ..+.. ..| . +.+++
T Consensus 3 ~KI~VIGa-G~vG~~ia~~la~~~~------~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~-~~d---~-~~~~~ 70 (307)
T PRK06223 3 KKISIIGA-GNVGATLAHLLALKEL------GDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITG-TND---Y-EDIAG 70 (307)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC------eEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEe-CCC---H-HHHCC
Confidence 58999999 9999999999998761 28999999988876654443210 00011 11221 123 2 34789
Q ss_pred ccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhhc
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQW 167 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~~ 167 (452)
+|+||.++|.....+..-.+...+ ....++.+.....+.+. .++.|+. +-|.|+.++.+.+..
T Consensus 71 aDiVii~~~~p~~~~~~r~~~~~~----------n~~i~~~i~~~i~~~~~-~~~viv~-----tNP~d~~~~~~~~~s 133 (307)
T PRK06223 71 SDVVVITAGVPRKPGMSRDDLLGI----------NAKIMKDVAEGIKKYAP-DAIVIVV-----TNPVDAMTYVALKES 133 (307)
T ss_pred CCEEEECCCCCCCcCCCHHHHHHH----------HHHHHHHHHHHHHHHCC-CeEEEEe-----cCcHHHHHHHHHHHh
Confidence 999999998655444322222211 23444554444444332 2333432 578899999988754
|
|
| >PRK08328 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0065 Score=58.38 Aligned_cols=103 Identities=10% Similarity=0.108 Sum_probs=62.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHH--------------------HHHHHHhCC-CCCCC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRV--------------------KQALQWASP-SHSLS 68 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl--------------------~~l~~~l~~-~~~~~ 68 (452)
..+|+|+|+ |.+|..+++.|++.|. -++.+++.+.-.. +...+.+.. ....+
T Consensus 27 ~~~VlIiG~-GGlGs~ia~~La~~Gv------g~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~ 99 (231)
T PRK08328 27 KAKVAVVGV-GGLGSPVAYYLAAAGV------GRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIK 99 (231)
T ss_pred CCcEEEECC-CHHHHHHHHHHHHcCC------CEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCE
Confidence 467999998 7789999999999984 4777777543211 111111111 01222
Q ss_pred ccEEEEeCCCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEec
Q 012947 69 IPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 69 v~~v~~Dl~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDls 121 (452)
+..+...+ +++.+.+++++.|+||.|...+. ....+.++|.+.++.+|+..
T Consensus 100 v~~~~~~~-~~~~~~~~l~~~D~Vid~~d~~~-~r~~l~~~~~~~~ip~i~g~ 150 (231)
T PRK08328 100 IETFVGRL-SEENIDEVLKGVDVIVDCLDNFE-TRYLLDDYAHKKGIPLVHGA 150 (231)
T ss_pred EEEEeccC-CHHHHHHHHhcCCEEEECCCCHH-HHHHHHHHHHHcCCCEEEEe
Confidence 33333334 34567777888888888875432 22345567777777777544
|
|
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0043 Score=56.14 Aligned_cols=112 Identities=20% Similarity=0.211 Sum_probs=70.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
.+|-++|- |-.|+.+++.|++.+ ++|.+.+|++++.+++.+. . ...+ ++..++++++|
T Consensus 2 ~~Ig~IGl-G~mG~~~a~~L~~~g-------~~v~~~d~~~~~~~~~~~~-------g--~~~~-----~s~~e~~~~~d 59 (163)
T PF03446_consen 2 MKIGFIGL-GNMGSAMARNLAKAG-------YEVTVYDRSPEKAEALAEA-------G--AEVA-----DSPAEAAEQAD 59 (163)
T ss_dssp BEEEEE---SHHHHHHHHHHHHTT-------TEEEEEESSHHHHHHHHHT-------T--EEEE-----SSHHHHHHHBS
T ss_pred CEEEEEch-HHHHHHHHHHHHhcC-------CeEEeeccchhhhhhhHHh-------h--hhhh-----hhhhhHhhccc
Confidence 47889997 899999999999998 8999999999999888763 1 2333 34667778889
Q ss_pred EEeecCCCCCCCCHHHHH-----HHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcC
Q 012947 91 LLLNCVGPYRLHGDPVAA-----ACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSA 148 (452)
Q Consensus 91 vVIn~aGp~~~~~~~vv~-----ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~ 148 (452)
+||.|+..... -+.++. .....|.-+||++...+-..+ +..+..++.|+..+-+
T Consensus 60 vvi~~v~~~~~-v~~v~~~~~i~~~l~~g~iiid~sT~~p~~~~---~~~~~~~~~g~~~vda 118 (163)
T PF03446_consen 60 VVILCVPDDDA-VEAVLFGENILAGLRPGKIIIDMSTISPETSR---ELAERLAAKGVRYVDA 118 (163)
T ss_dssp EEEE-SSSHHH-HHHHHHCTTHGGGS-TTEEEEE-SS--HHHHH---HHHHHHHHTTEEEEEE
T ss_pred ceEeecccchh-hhhhhhhhHHhhccccceEEEecCCcchhhhh---hhhhhhhhccceeeee
Confidence 99999842111 011211 112346679999876554322 2345566678877643
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0012 Score=66.10 Aligned_cols=85 Identities=15% Similarity=0.126 Sum_probs=60.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
+++|-|.|||||+|+.+++.|.++.. .++....++..+ |+.+ .+..++++
T Consensus 2 ~~~VaIvGAtGy~G~eLlrlL~~hp~------~~l~~~~s~~~~---------------------~~~~---~~~~~~~~ 51 (313)
T PRK11863 2 KPKVFIDGEAGTTGLQIRERLAGRSD------IELLSIPEAKRK---------------------DAAA---RRELLNAA 51 (313)
T ss_pred CcEEEEECCCCHHHHHHHHHHhcCCC------eEEEEEecCCCC---------------------cccC---chhhhcCC
Confidence 47899999999999999999998862 666655544322 0111 12345689
Q ss_pred cEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHH
Q 012947 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEF 126 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~ 126 (452)
|+|+.+.+. . ....++....+.|+..||+++...+
T Consensus 52 DvvFlalp~-~-~s~~~~~~~~~~g~~VIDlSadfRl 86 (313)
T PRK11863 52 DVAILCLPD-D-AAREAVALIDNPATRVIDASTAHRT 86 (313)
T ss_pred CEEEECCCH-H-HHHHHHHHHHhCCCEEEECChhhhc
Confidence 999998832 2 2356777777889999999987643
|
|
| >PRK05600 thiamine biosynthesis protein ThiF; Validated | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0067 Score=62.42 Aligned_cols=103 Identities=17% Similarity=0.135 Sum_probs=71.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC-------------------hhHHHHHHHHhCC-CCCCCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASP-SHSLSI 69 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~-------------------~~kl~~l~~~l~~-~~~~~v 69 (452)
..+|+|+|+ |.+|..++++|++.|. .++.+++.+ ..|.+.+.+.+.. ....++
T Consensus 41 ~~~VliiG~-GglG~~v~~~La~~Gv------g~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i 113 (370)
T PRK05600 41 NARVLVIGA-GGLGCPAMQSLASAGV------GTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRV 113 (370)
T ss_pred CCcEEEECC-CHHHHHHHHHHHHcCC------CEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCee
Confidence 467999998 7789999999999984 478887765 2344444444432 112344
Q ss_pred cEEEEeCCCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEec
Q 012947 70 PILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 70 ~~v~~Dl~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDls 121 (452)
..+...++ ++.+.++++++|+||.|...+.. -..+-++|.+.++.+|...
T Consensus 114 ~~~~~~i~-~~~~~~~~~~~DlVid~~Dn~~~-r~~in~~~~~~~iP~v~~~ 163 (370)
T PRK05600 114 NALRERLT-AENAVELLNGVDLVLDGSDSFAT-KFLVADAAEITGTPLVWGT 163 (370)
T ss_pred EEeeeecC-HHHHHHHHhCCCEEEECCCCHHH-HHHHHHHHHHcCCCEEEEE
Confidence 55555554 56788889999999999865432 2456688999888877653
|
|
| >PRK15116 sulfur acceptor protein CsdL; Provisional | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0084 Score=58.86 Aligned_cols=35 Identities=11% Similarity=0.171 Sum_probs=28.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN 50 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~ 50 (452)
+..+|+|+|+ |.+|..+++.|++.|. -++.+++.+
T Consensus 29 ~~s~VlVvG~-GGVGs~vae~Lar~GV------g~itLiD~D 63 (268)
T PRK15116 29 ADAHICVVGI-GGVGSWAAEALARTGI------GAITLIDMD 63 (268)
T ss_pred cCCCEEEECc-CHHHHHHHHHHHHcCC------CEEEEEeCC
Confidence 3467999998 7899999999999984 477777755
|
|
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0078 Score=60.41 Aligned_cols=129 Identities=18% Similarity=0.161 Sum_probs=74.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh--hHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~--~kl~~l~~~l~~~-~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
++|.|+||||++|..++..|+..+.. .++.+.+|++ ++++....++... ....... .....+ +. +.++
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~-----~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~-~i~~~~--d~-~~l~ 71 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVV-----KEINLISRPKSLEKLKGLRLDIYDALAAAGIDA-EIKISS--DL-SDVA 71 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCC-----CEEEEEECcccccccccccchhhhchhccCCCc-EEEECC--CH-HHhC
Confidence 47999999999999999999998731 3689999965 5665444333210 0011111 122221 12 3489
Q ss_pred CccEEeecCCCCCCCC---HHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHh
Q 012947 88 QTKLLLNCVGPYRLHG---DPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNS 164 (452)
Q Consensus 88 ~~dvVIn~aGp~~~~~---~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~ 164 (452)
++|+||-++|.....+ ..+++. ....++.......+.+. .++.|+.+ -|-|+++|.+.
T Consensus 72 ~aDiViitag~p~~~~~~r~dl~~~-------------n~~i~~~~~~~i~~~~~-~~~viv~~-----npvd~~t~~~~ 132 (309)
T cd05294 72 GSDIVIITAGVPRKEGMSRLDLAKK-------------NAKIVKKYAKQIAEFAP-DTKILVVT-----NPVDVMTYKAL 132 (309)
T ss_pred CCCEEEEecCCCCCCCCCHHHHHHH-------------HHHHHHHHHHHHHHHCC-CeEEEEeC-----CchHHHHHHHH
Confidence 9999999999543322 112121 12334444444443332 34445433 57788898887
Q ss_pred hhc
Q 012947 165 RQW 167 (452)
Q Consensus 165 ~~~ 167 (452)
+..
T Consensus 133 ~~~ 135 (309)
T cd05294 133 KES 135 (309)
T ss_pred Hhc
Confidence 655
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0039 Score=65.02 Aligned_cols=72 Identities=22% Similarity=0.314 Sum_probs=57.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+++|+|+ |.+|+.++.+|...|. .++.++.|+.++.+.+.++++ .... ..-+++.+.+.++
T Consensus 181 ~kkvlviGa-G~~a~~va~~L~~~g~------~~I~V~nRt~~ra~~La~~~~-----~~~~-----~~~~~l~~~l~~a 243 (414)
T PRK13940 181 SKNVLIIGA-GQTGELLFRHVTALAP------KQIMLANRTIEKAQKITSAFR-----NASA-----HYLSELPQLIKKA 243 (414)
T ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCC------CEEEEECCCHHHHHHHHHHhc-----CCeE-----ecHHHHHHHhccC
Confidence 467999998 8899999999999884 589999999999998888763 1121 2235678889999
Q ss_pred cEEeecCCC
Q 012947 90 KLLLNCVGP 98 (452)
Q Consensus 90 dvVIn~aGp 98 (452)
|+||||.+.
T Consensus 244 DiVI~aT~a 252 (414)
T PRK13940 244 DIIIAAVNV 252 (414)
T ss_pred CEEEECcCC
Confidence 999999864
|
|
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0088 Score=50.45 Aligned_cols=70 Identities=21% Similarity=0.360 Sum_probs=57.7
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-HcCccE
Q 012947 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQTKL 91 (452)
Q Consensus 13 ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~-~~~~dv 91 (452)
|+|+|. |-+|+.+++.|.+.+ .++.++.+++++.+++.++ .+.++.+|.+|++.++++ +++++.
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~-------~~vvvid~d~~~~~~~~~~-------~~~~i~gd~~~~~~l~~a~i~~a~~ 65 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGG-------IDVVVIDRDPERVEELREE-------GVEVIYGDATDPEVLERAGIEKADA 65 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTT-------SEEEEEESSHHHHHHHHHT-------TSEEEES-TTSHHHHHHTTGGCESE
T ss_pred eEEEcC-CHHHHHHHHHHHhCC-------CEEEEEECCcHHHHHHHhc-------ccccccccchhhhHHhhcCccccCE
Confidence 678887 678999999999965 6999999999998877653 378999999999999885 678998
Q ss_pred EeecCC
Q 012947 92 LLNCVG 97 (452)
Q Consensus 92 VIn~aG 97 (452)
||-+.+
T Consensus 66 vv~~~~ 71 (116)
T PF02254_consen 66 VVILTD 71 (116)
T ss_dssp EEEESS
T ss_pred EEEccC
Confidence 888764
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >PLN02602 lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.027 Score=57.45 Aligned_cols=129 Identities=16% Similarity=0.180 Sum_probs=79.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC--CCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--SHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~--~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
.+|.|+|| |.+|..++-.|+..+-. -++.+.++++++++..+.++.. +..... .+.. -.| . +.+++
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~-----~el~LiDi~~~~~~g~a~DL~~~~~~~~~~-~i~~-~~d---y-~~~~d 105 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLA-----DELALVDVNPDKLRGEMLDLQHAAAFLPRT-KILA-STD---Y-AVTAG 105 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCC-----CEEEEEeCCCchhhHHHHHHHhhhhcCCCC-EEEe-CCC---H-HHhCC
Confidence 79999997 99999999999887631 4799999999988877776642 111122 2222 123 2 23889
Q ss_pred ccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhhc
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQW 167 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~~ 167 (452)
+|+||-+||.....++.=.+... .....++.+.....+.+. .++.|+- +-|.|+.++.+.+..
T Consensus 106 aDiVVitAG~~~k~g~tR~dll~----------~N~~I~~~i~~~I~~~~p-~~ivivv-----tNPvdv~t~~~~k~s 168 (350)
T PLN02602 106 SDLCIVTAGARQIPGESRLNLLQ----------RNVALFRKIIPELAKYSP-DTILLIV-----SNPVDVLTYVAWKLS 168 (350)
T ss_pred CCEEEECCCCCCCcCCCHHHHHH----------HHHHHHHHHHHHHHHHCC-CeEEEEe-----cCchHHHHHHHHHHh
Confidence 99999999975544421111111 123444555444444332 2333332 268899999887665
|
|
| >cd05292 LDH_2 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.023 Score=56.97 Aligned_cols=128 Identities=15% Similarity=0.155 Sum_probs=78.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC--CCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--SHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~--~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
|+|.|+|+ |.+|..++..|+..+.. .++.+.+|++++++....++.. +...... +. ..|. +.+++
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~~-----~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~-i~--~~d~----~~l~~ 67 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGLA-----SEIVLVDINKAKAEGEAMDLAHGTPFVKPVR-IY--AGDY----ADCKG 67 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCC-----CEEEEEECCchhhhhHHHHHHccccccCCeE-Ee--eCCH----HHhCC
Confidence 47999998 99999999999998731 4799999999887754444431 0011111 11 1232 34789
Q ss_pred ccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhhc
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQW 167 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~~ 167 (452)
+|+||.++|.....+..-.+.... ....++.+.+...+.+ .++++++- +-|.|+.++.+.+.-
T Consensus 68 aDiViita~~~~~~~~~r~dl~~~----------n~~i~~~~~~~l~~~~-~~giiiv~-----tNP~d~~~~~~~~~s 130 (308)
T cd05292 68 ADVVVITAGANQKPGETRLDLLKR----------NVAIFKEIIPQILKYA-PDAILLVV-----TNPVDVLTYVAYKLS 130 (308)
T ss_pred CCEEEEccCCCCCCCCCHHHHHHH----------HHHHHHHHHHHHHHHC-CCeEEEEe-----cCcHHHHHHHHHHHH
Confidence 999999998654444222222222 2334444444444433 23554443 368899999887764
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.011 Score=55.44 Aligned_cols=104 Identities=13% Similarity=0.267 Sum_probs=64.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh---------------------hHHHHHHHHhCC-CCCC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP---------------------TRVKQALQWASP-SHSL 67 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~---------------------~kl~~l~~~l~~-~~~~ 67 (452)
+.+|+|+|++| +|..+++.|+..|. -++.+++.+. .|.+.+.+.+.. ....
T Consensus 19 ~s~VlviG~gg-lGsevak~L~~~GV------g~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v 91 (198)
T cd01485 19 SAKVLIIGAGA-LGAEIAKNLVLAGI------DSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNV 91 (198)
T ss_pred hCcEEEECCCH-HHHHHHHHHHHcCC------CEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCC
Confidence 46799999966 99999999999984 4677666431 123233333321 1122
Q ss_pred CccEEEEeCCC-HHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEec
Q 012947 68 SIPILTADTTD-PPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 68 ~v~~v~~Dl~d-~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDls 121 (452)
++..+..++.+ .+...+.+++.|+||.|..+.. .-..+-+.|.+.++.+|...
T Consensus 92 ~i~~~~~~~~~~~~~~~~~~~~~dvVi~~~d~~~-~~~~ln~~c~~~~ip~i~~~ 145 (198)
T cd01485 92 KLSIVEEDSLSNDSNIEEYLQKFTLVIATEENYE-RTAKVNDVCRKHHIPFISCA 145 (198)
T ss_pred EEEEEecccccchhhHHHHHhCCCEEEECCCCHH-HHHHHHHHHHHcCCCEEEEE
Confidence 33333334432 4556777889999998876532 22456678888877776654
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol |
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0018 Score=62.11 Aligned_cols=79 Identities=8% Similarity=0.035 Sum_probs=52.2
Q ss_pred CCeEEEEcCC----------------chHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEE
Q 012947 10 LFDVIILGAS----------------GFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILT 73 (452)
Q Consensus 10 ~~~ilV~GAT----------------G~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~ 73 (452)
..+|+||+|. ||+|.++|++|+++| ++|.+..+....... .+. .......+.
T Consensus 3 gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~G-------a~V~li~g~~~~~~~---~~~--~~~~~~~V~ 70 (229)
T PRK09620 3 GKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKG-------AHVIYLHGYFAEKPN---DIN--NQLELHPFE 70 (229)
T ss_pred CCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCC-------CeEEEEeCCCcCCCc---ccC--CceeEEEEe
Confidence 4579999875 999999999999999 788887763221100 000 011222344
Q ss_pred EeCCCHHHHHHHHc--CccEEeecCCCCC
Q 012947 74 ADTTDPPSLHRLCS--QTKLLLNCVGPYR 100 (452)
Q Consensus 74 ~Dl~d~~sl~~~~~--~~dvVIn~aGp~~ 100 (452)
.|.+..+.+.++++ ++|+|||+|+...
T Consensus 71 s~~d~~~~l~~~~~~~~~D~VIH~AAvsD 99 (229)
T PRK09620 71 GIIDLQDKMKSIITHEKVDAVIMAAAGSD 99 (229)
T ss_pred cHHHHHHHHHHHhcccCCCEEEECccccc
Confidence 44444567788885 6899999998743
|
|
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0057 Score=55.71 Aligned_cols=115 Identities=19% Similarity=0.270 Sum_probs=78.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
.+..+|+||||-+|+.+.++++..+. .-+|.+++|.+---.+ ....+.....|.+.-+++....++.
T Consensus 18 ~~s~fvlGAtG~~G~~llk~~~E~~~-----FSKV~~i~RR~~~d~a--------t~k~v~q~~vDf~Kl~~~a~~~qg~ 84 (238)
T KOG4039|consen 18 NMSGFVLGATGLCGGGLLKHAQEAPQ-----FSKVYAILRRELPDPA--------TDKVVAQVEVDFSKLSQLATNEQGP 84 (238)
T ss_pred ccceEEEeccccccHHHHHHHHhccc-----ceeEEEEEeccCCCcc--------ccceeeeEEechHHHHHHHhhhcCC
Confidence 46789999999999999999998873 2588888886421111 1345667778888888888888999
Q ss_pred cEEeecCCCCCCCCHHHHHHHHHhCCc-EEEecCcHHHHHHHHHHHHHHHHhCccE---EEcCCCCCc
Q 012947 90 KLLLNCVGPYRLHGDPVAAACVHSGCD-YLDISGEPEFMERMEARYHEKAVETGSL---LVSACGFDS 153 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~~~g~~-yvDlsge~~~~~~~~~~~~~~A~~~gv~---iv~~~G~~s 153 (452)
||.+.|.|.... .+|.+ ++-+. ..+ ..+..+.|+++|+. ++++.|.|.
T Consensus 85 dV~FcaLgTTRg----------kaGadgfykvD--hDy----vl~~A~~AKe~Gck~fvLvSS~GAd~ 136 (238)
T KOG4039|consen 85 DVLFCALGTTRG----------KAGADGFYKVD--HDY----VLQLAQAAKEKGCKTFVLVSSAGADP 136 (238)
T ss_pred ceEEEeeccccc----------ccccCceEeec--hHH----HHHHHHHHHhCCCeEEEEEeccCCCc
Confidence 999999885432 12222 22221 112 23345678888875 668888653
|
|
| >cd05293 LDH_1 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.015 Score=58.40 Aligned_cols=130 Identities=14% Similarity=0.113 Sum_probs=80.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC--CCCCCccEEEEeCCCHHHHHHHHc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--SHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~--~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
..+|.|+|| |.+|..++-.|+..+- .-++.+.++++++++....++.. +..... .+.+ -.|. + .++
T Consensus 3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~-----~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~-~v~~-~~dy---~-~~~ 70 (312)
T cd05293 3 RNKVTVVGV-GQVGMACAISILAKGL-----ADELVLVDVVEDKLKGEAMDLQHGSAFLKNP-KIEA-DKDY---S-VTA 70 (312)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCC-----CCEEEEEeCCccHHHHHHHHHHHhhccCCCC-EEEE-CCCH---H-HhC
Confidence 358999997 9999999999988762 14799999999888777776642 111111 2221 1232 2 378
Q ss_pred CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhhc
Q 012947 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQW 167 (452)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~~ 167 (452)
++|+||.++|.....++.=.+... .....++++.....+.+ -+++.|+- +-|.|+.++.+.+.-
T Consensus 71 ~adivvitaG~~~k~g~~R~dll~----------~N~~i~~~~~~~i~~~~-p~~~vivv-----sNP~d~~t~~~~k~s 134 (312)
T cd05293 71 NSKVVIVTAGARQNEGESRLDLVQ----------RNVDIFKGIIPKLVKYS-PNAILLVV-----SNPVDIMTYVAWKLS 134 (312)
T ss_pred CCCEEEECCCCCCCCCCCHHHHHH----------HHHHHHHHHHHHHHHhC-CCcEEEEc-----cChHHHHHHHHHHHh
Confidence 999999999975544421111111 12344455544444433 23444443 368899999888874
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0086 Score=61.09 Aligned_cols=77 Identities=17% Similarity=0.203 Sum_probs=57.4
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 8 ~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
.....|||+||+|.+|++.++-+...+ +..+++.++.+++ ++++++++ -...|..+++-++...+
T Consensus 156 ~~g~~vLv~ggsggVG~~aiQlAk~~~-------~~~v~t~~s~e~~-~l~k~lGA-------d~vvdy~~~~~~e~~kk 220 (347)
T KOG1198|consen 156 SKGKSVLVLGGSGGVGTAAIQLAKHAG-------AIKVVTACSKEKL-ELVKKLGA-------DEVVDYKDENVVELIKK 220 (347)
T ss_pred CCCCeEEEEeCCcHHHHHHHHHHHhcC-------CcEEEEEcccchH-HHHHHcCC-------cEeecCCCHHHHHHHHh
Confidence 345689999999999999999887776 4667777788877 45666642 23568888655555555
Q ss_pred ----CccEEeecCCCC
Q 012947 88 ----QTKLLLNCVGPY 99 (452)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (452)
+.|+|+.|+|..
T Consensus 221 ~~~~~~DvVlD~vg~~ 236 (347)
T KOG1198|consen 221 YTGKGVDVVLDCVGGS 236 (347)
T ss_pred hcCCCccEEEECCCCC
Confidence 489999999863
|
|
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.016 Score=54.52 Aligned_cols=115 Identities=15% Similarity=0.114 Sum_probs=74.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
+.++++|.|. |.+|+.++++|.+.| .+|.+.+++.++++++.+.++ .. .+|. +++.. .+
T Consensus 27 ~gk~v~I~G~-G~vG~~~A~~L~~~G-------~~Vvv~D~~~~~~~~~~~~~g------~~--~v~~---~~l~~--~~ 85 (200)
T cd01075 27 EGKTVAVQGL-GKVGYKLAEHLLEEG-------AKLIVADINEEAVARAAELFG------AT--VVAP---EEIYS--VD 85 (200)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCC-------CEEEEEcCCHHHHHHHHHHcC------CE--EEcc---hhhcc--cc
Confidence 4568999998 689999999999998 799999999999888776542 12 2222 22222 27
Q ss_pred ccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCC
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGF 151 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~ 151 (452)
+|+++.|+.-.... .. ...+.+..+|--.+..++.. ....+.-++.|+.+++-++.
T Consensus 86 ~Dv~vp~A~~~~I~-~~---~~~~l~~~~v~~~AN~~~~~---~~~~~~L~~~Gi~~~Pd~~~ 141 (200)
T cd01075 86 ADVFAPCALGGVIN-DD---TIPQLKAKAIAGAANNQLAD---PRHGQMLHERGILYAPDYVV 141 (200)
T ss_pred CCEEEecccccccC-HH---HHHHcCCCEEEECCcCccCC---HhHHHHHHHCCCEEeCceee
Confidence 99999988532222 22 22334566554445555442 22345567789988875554
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >cd05295 MDH_like Malate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.005 Score=64.58 Aligned_cols=140 Identities=11% Similarity=-0.011 Sum_probs=86.7
Q ss_pred CCCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec--ChhHHHHHHHHhCC---CCCCCccEEEEeCCCHH
Q 012947 6 QIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR--NPTRVKQALQWASP---SHSLSIPILTADTTDPP 80 (452)
Q Consensus 6 ~~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR--~~~kl~~l~~~l~~---~~~~~v~~v~~Dl~d~~ 80 (452)
.+..+.+|+||||+|.||..++-.+++-.--+..+...+.+.+. +.++++..+-++.. +....+.+. . +
T Consensus 119 ~~~~p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~-~--~--- 192 (452)
T cd05295 119 SKINPLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT-T--D--- 192 (452)
T ss_pred cCCCceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE-E--C---
Confidence 45567999999999999999999998721101112377888998 68888887776642 111122222 1 1
Q ss_pred HHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhC-ccEEEcCCCCCcchhhHH
Q 012947 81 SLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVET-GSLLVSACGFDSIPAELG 159 (452)
Q Consensus 81 sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~-gv~iv~~~G~~s~P~dl~ 159 (452)
-.+.++++|+||-++|.....|+.-.+.... ....++.......+.|.+. ++.|+- +-|.|+.
T Consensus 193 -~~ea~~daDvvIitag~prk~G~~R~DLL~~----------N~~Ifk~~g~~I~~~a~~~~~VlVv~-----tNPvD~~ 256 (452)
T cd05295 193 -LDVAFKDAHVIVLLDDFLIKEGEDLEGCIRS----------RVAICQLYGPLIEKNAKEDVKVIVAG-----RTFLNLK 256 (452)
T ss_pred -CHHHhCCCCEEEECCCCCCCcCCCHHHHHHH----------HHHHHHHHHHHHHHhCCCCCeEEEEe-----CCcHHHH
Confidence 2577899999999999755544321111111 1223444445555555433 344432 3688999
Q ss_pred HHHHhhhc
Q 012947 160 VMFNSRQW 167 (452)
Q Consensus 160 ~~~~~~~~ 167 (452)
++.+.+..
T Consensus 257 t~i~~k~a 264 (452)
T cd05295 257 TSILIKYA 264 (452)
T ss_pred HHHHHHHc
Confidence 99998887
|
These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PTZ00117 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.009 Score=60.26 Aligned_cols=131 Identities=11% Similarity=0.015 Sum_probs=76.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC-CCCCCcc-EEEEeCCCHHHHHHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIP-ILTADTTDPPSLHRLC 86 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~-~~~~~v~-~v~~Dl~d~~sl~~~~ 86 (452)
+.++|.|+|| |.+|..++..++..+- .++++.++++++++....++.. ....... .+.+ .+| .+ .+
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~------~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~-~~d---~~-~l 71 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKNL------GDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILG-TNN---YE-DI 71 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCCC------CeEEEEECCCccchhHHHHHhhhccccCCCeEEEe-CCC---HH-Hh
Confidence 3468999998 9999999998888762 4799999998776543333321 0001111 1221 123 44 66
Q ss_pred cCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhh
Q 012947 87 SQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQ 166 (452)
Q Consensus 87 ~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~ 166 (452)
+++|+||.++|.....+..-.+....+ ...++++.....+.+. .++.|+- +-|.|+.++.+.+.
T Consensus 72 ~~ADiVVitag~~~~~g~~r~dll~~n----------~~i~~~i~~~i~~~~p-~a~vivv-----sNP~di~t~~~~~~ 135 (319)
T PTZ00117 72 KDSDVVVITAGVQRKEEMTREDLLTIN----------GKIMKSVAESVKKYCP-NAFVICV-----TNPLDCMVKVFQEK 135 (319)
T ss_pred CCCCEEEECCCCCCCCCCCHHHHHHHH----------HHHHHHHHHHHHHHCC-CeEEEEe-----cChHHHHHHHHHHh
Confidence 899999999986544432222211111 1344555454444432 2323332 57889999887765
Q ss_pred c
Q 012947 167 W 167 (452)
Q Consensus 167 ~ 167 (452)
.
T Consensus 136 s 136 (319)
T PTZ00117 136 S 136 (319)
T ss_pred h
Confidence 4
|
|
| >PRK07877 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.0076 Score=66.90 Aligned_cols=105 Identities=10% Similarity=0.069 Sum_probs=72.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC------------------hhHHHHHHHHhCC-CCCCCcc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN------------------PTRVKQALQWASP-SHSLSIP 70 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~------------------~~kl~~l~~~l~~-~~~~~v~ 70 (452)
+.+|+|+|+ | +|..++.+|++.|-- -++.+++.+ ..|.+.+.+.+.. ....++.
T Consensus 107 ~~~V~IvG~-G-lGs~~a~~LaraGvv-----G~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~ 179 (722)
T PRK07877 107 RLRIGVVGL-S-VGHAIAHTLAAEGLC-----GELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVE 179 (722)
T ss_pred cCCEEEEEe-c-HHHHHHHHHHHccCC-----CeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEE
Confidence 467999999 7 899999999998820 255655543 2243333333321 1233455
Q ss_pred EEEEeCCCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCc
Q 012947 71 ILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGE 123 (452)
Q Consensus 71 ~v~~Dl~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge 123 (452)
.+...++ ++.++++++++|+||.|.--+. ....+.++|.+.++.+|.-++.
T Consensus 180 ~~~~~i~-~~n~~~~l~~~DlVvD~~D~~~-~R~~ln~~a~~~~iP~i~~~~~ 230 (722)
T PRK07877 180 VFTDGLT-EDNVDAFLDGLDVVVEECDSLD-VKVLLREAARARRIPVLMATSD 230 (722)
T ss_pred EEeccCC-HHHHHHHhcCCCEEEECCCCHH-HHHHHHHHHHHcCCCEEEEcCC
Confidence 5555665 6889999999999999986432 2245779999999998877653
|
|
| >PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.0047 Score=53.77 Aligned_cols=53 Identities=19% Similarity=0.322 Sum_probs=32.4
Q ss_pred CCCCCCCCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEE-EEecChhHHHHHHHHh
Q 012947 1 MQAQSQIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLA-LAGRNPTRVKQALQWA 61 (452)
Q Consensus 1 ~~~~~~~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~-iagR~~~kl~~l~~~l 61 (452)
|..|......++|-|+|+ |-+|..+++.|.+.+ +.|. +..|+.++.+++.+.+
T Consensus 1 ~~~~~~~~~~l~I~iIGa-GrVG~~La~aL~~ag-------~~v~~v~srs~~sa~~a~~~~ 54 (127)
T PF10727_consen 1 MNTPATQAARLKIGIIGA-GRVGTALARALARAG-------HEVVGVYSRSPASAERAAAFI 54 (127)
T ss_dssp -----------EEEEECT-SCCCCHHHHHHHHTT-------SEEEEESSCHH-HHHHHHC--
T ss_pred CCccccCCCccEEEEECC-CHHHHHHHHHHHHCC-------CeEEEEEeCCccccccccccc
Confidence 667766667799999999 999999999999988 5664 4578887776666554
|
This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A. |
| >cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2 | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.013 Score=56.16 Aligned_cols=115 Identities=13% Similarity=0.154 Sum_probs=70.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC----hhHH-------HHHHHHhCCCCCCCccEEEEeCC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN----PTRV-------KQALQWASPSHSLSIPILTADTT 77 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~----~~kl-------~~l~~~l~~~~~~~v~~v~~Dl~ 77 (452)
+..+++|+|| |..|+.+++.|.+.|-. ..++.+.+|+ .++. +++.+++. .. . .+
T Consensus 24 ~~~rvlvlGA-GgAg~aiA~~L~~~G~~----~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~----~~-~---~~-- 88 (226)
T cd05311 24 EEVKIVINGA-GAAGIAIARLLLAAGAK----PENIVVVDSKGVIYEGREDDLNPDKNEIAKETN----PE-K---TG-- 88 (226)
T ss_pred cCCEEEEECc-hHHHHHHHHHHHHcCcC----cceEEEEeCCCccccccchhhhHHHHHHHHHhc----cC-c---cc--
Confidence 3468999999 88999999999998730 0179999998 4442 22333221 00 0 11
Q ss_pred CHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccE-EEcC
Q 012947 78 DPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSL-LVSA 148 (452)
Q Consensus 78 d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~-iv~~ 148 (452)
.++.+.++++|+|||+.++... ...+++...+..+.| |++... . ..+.+.|++.|+. +.++
T Consensus 89 --~~l~~~l~~~dvlIgaT~~G~~-~~~~l~~m~~~~ivf-~lsnP~--~----e~~~~~A~~~ga~i~a~G 150 (226)
T cd05311 89 --GTLKEALKGADVFIGVSRPGVV-KKEMIKKMAKDPIVF-ALANPV--P----EIWPEEAKEAGADIVATG 150 (226)
T ss_pred --CCHHHHHhcCCEEEeCCCCCCC-CHHHHHhhCCCCEEE-EeCCCC--C----cCCHHHHHHcCCcEEEeC
Confidence 2365677889999999975443 345556554444445 676332 1 2245667777885 5444
|
Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph |
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.016 Score=62.12 Aligned_cols=73 Identities=15% Similarity=0.242 Sum_probs=57.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+|+|+|+ |-+|+.++++|...|. .+|.++.|+.++.+.+.+++. ...+...+ .+++.+.+.++
T Consensus 266 ~kkVlVIGA-G~mG~~~a~~L~~~G~------~~V~V~nRs~era~~La~~~~-----g~~i~~~~---~~dl~~al~~a 330 (519)
T PLN00203 266 SARVLVIGA-GKMGKLLVKHLVSKGC------TKMVVVNRSEERVAALREEFP-----DVEIIYKP---LDEMLACAAEA 330 (519)
T ss_pred CCEEEEEeC-HHHHHHHHHHHHhCCC------CeEEEEeCCHHHHHHHHHHhC-----CCceEeec---HhhHHHHHhcC
Confidence 468999999 9999999999998872 479999999999998887662 22222222 34567788899
Q ss_pred cEEeecCC
Q 012947 90 KLLLNCVG 97 (452)
Q Consensus 90 dvVIn~aG 97 (452)
|+||+|.+
T Consensus 331 DVVIsAT~ 338 (519)
T PLN00203 331 DVVFTSTS 338 (519)
T ss_pred CEEEEccC
Confidence 99999875
|
|
| >PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.015 Score=61.81 Aligned_cols=119 Identities=18% Similarity=0.185 Sum_probs=77.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+++|+|+ |.+|+.++..|++.| .++.+.+|+.++.+++.+.+. ... .+..+ +.. +.++
T Consensus 332 ~k~vlIiGa-GgiG~aia~~L~~~G-------~~V~i~~R~~~~~~~la~~~~------~~~--~~~~~---~~~-l~~~ 391 (477)
T PRK09310 332 NQHVAIVGA-GGAAKAIATTLARAG-------AELLIFNRTKAHAEALASRCQ------GKA--FPLES---LPE-LHRI 391 (477)
T ss_pred CCEEEEEcC-cHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhc------cce--echhH---hcc-cCCC
Confidence 468999996 899999999999988 789999999999888776542 111 12222 222 4689
Q ss_pred cEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhhc
Q 012947 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQW 167 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~~ 167 (452)
|+||||...... +.+ ... ...+|+...+.-+. +-+.|++.|+.++++. +|..+.+..++
T Consensus 392 DiVInatP~g~~----~~~-~l~--~~v~D~~Y~P~~T~-----ll~~A~~~G~~~~~G~-------~Ml~~Qa~~~f 450 (477)
T PRK09310 392 DIIINCLPPSVT----IPK-AFP--PCVVDINTLPKHSP-----YTQYARSQGSSIIYGY-------EMFAEQALLQF 450 (477)
T ss_pred CEEEEcCCCCCc----chh-HHh--hhEEeccCCCCCCH-----HHHHHHHCcCEEECcH-------HHHHHHHHHHH
Confidence 999999853321 211 111 25778876554322 3466788898887654 45555554444
|
|
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.013 Score=61.53 Aligned_cols=72 Identities=15% Similarity=0.207 Sum_probs=56.5
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
...+++|+|+ |-+|+.++++|...|. .++.+++|+.++++.+.++++ ... .+.+++.+.+.+
T Consensus 181 ~~~~vlViGa-G~iG~~~a~~L~~~G~------~~V~v~~r~~~ra~~la~~~g------~~~-----~~~~~~~~~l~~ 242 (423)
T PRK00045 181 SGKKVLVIGA-GEMGELVAKHLAEKGV------RKITVANRTLERAEELAEEFG------GEA-----IPLDELPEALAE 242 (423)
T ss_pred cCCEEEEECc-hHHHHHHHHHHHHCCC------CeEEEEeCCHHHHHHHHHHcC------CcE-----eeHHHHHHHhcc
Confidence 3468999997 9999999999998872 389999999999988887663 111 123566777889
Q ss_pred ccEEeecCCC
Q 012947 89 TKLLLNCVGP 98 (452)
Q Consensus 89 ~dvVIn~aGp 98 (452)
+|+||+|.|.
T Consensus 243 aDvVI~aT~s 252 (423)
T PRK00045 243 ADIVISSTGA 252 (423)
T ss_pred CCEEEECCCC
Confidence 9999999863
|
|
| >PRK06728 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.0069 Score=61.56 Aligned_cols=99 Identities=16% Similarity=0.163 Sum_probs=63.5
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceE---EEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH
Q 012947 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKS---LALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHR 84 (452)
Q Consensus 8 ~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~---v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~ 84 (452)
.+.++|-|+||||++|+.+++.|.++.. +. +.++....+.-+.+ .+. .. ....-++ |+++
T Consensus 3 ~~~~~VaIvGATG~vG~ell~lL~~h~~------f~v~~l~~~aS~~saGk~~--~~~----~~-~l~v~~~-~~~~--- 65 (347)
T PRK06728 3 EKGYHVAVVGATGAVGQKIIELLEKETK------FNIAEVTLLSSKRSAGKTV--QFK----GR-EIIIQEA-KINS--- 65 (347)
T ss_pred CCCCEEEEEeCCCHHHHHHHHHHHHCCC------CCcccEEEEECcccCCCCe--eeC----Cc-ceEEEeC-CHHH---
Confidence 3568999999999999999999997642 33 44444322211111 121 11 2333333 4333
Q ss_pred HHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHH
Q 012947 85 LCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEF 126 (452)
Q Consensus 85 ~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~ 126 (452)
++++|+|+.+++.- ....++..+.+.|+..||+++...+
T Consensus 66 -~~~~Divf~a~~~~--~s~~~~~~~~~~G~~VID~Ss~fR~ 104 (347)
T PRK06728 66 -FEGVDIAFFSAGGE--VSRQFVNQAVSSGAIVIDNTSEYRM 104 (347)
T ss_pred -hcCCCEEEECCChH--HHHHHHHHHHHCCCEEEECchhhcC
Confidence 36899999998532 3467777788899999999986543
|
|
| >COG2085 Predicted dinucleotide-binding enzymes [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.01 Score=55.80 Aligned_cols=69 Identities=14% Similarity=0.194 Sum_probs=51.0
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR-~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
+++.+||+|-+|..+++.|++.+ ++|.+..| .+++++...+.+.. . + ...+...+++.+|
T Consensus 2 ~~~~i~GtGniG~alA~~~a~ag-------~eV~igs~r~~~~~~a~a~~l~~----~---i-----~~~~~~dA~~~aD 62 (211)
T COG2085 2 MIIAIIGTGNIGSALALRLAKAG-------HEVIIGSSRGPKALAAAAAALGP----L---I-----TGGSNEDAAALAD 62 (211)
T ss_pred cEEEEeccChHHHHHHHHHHhCC-------CeEEEecCCChhHHHHHHHhhcc----c---c-----ccCChHHHHhcCC
Confidence 45666778999999999999998 79999965 55566666666531 1 1 1244567788999
Q ss_pred EEeecCCCCC
Q 012947 91 LLLNCVGPYR 100 (452)
Q Consensus 91 vVIn~aGp~~ 100 (452)
+||-++ ||.
T Consensus 63 VVvLAV-P~~ 71 (211)
T COG2085 63 VVVLAV-PFE 71 (211)
T ss_pred EEEEec-cHH
Confidence 999988 554
|
|
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.014 Score=61.48 Aligned_cols=91 Identities=15% Similarity=0.221 Sum_probs=64.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
++|.|+||+|.+|..+++.|.+.+ ++|.+.+|+.++.++...+++ +. . . .+..+.++++|
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G-------~~V~v~~r~~~~~~~~a~~~g------v~--~--~---~~~~e~~~~aD 60 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKG-------FEVIVTGRDPKKGKEVAKELG------VE--Y--A---NDNIDAAKDAD 60 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCC-------CEEEEEECChHHHHHHHHHcC------Ce--e--c---cCHHHHhccCC
Confidence 479999999999999999999988 789999999888766665442 11 1 1 22455678899
Q ss_pred EEeecCCCCCCCCHHHHHHHH---HhCCcEEEecCc
Q 012947 91 LLLNCVGPYRLHGDPVAAACV---HSGCDYLDISGE 123 (452)
Q Consensus 91 vVIn~aGp~~~~~~~vv~ac~---~~g~~yvDlsge 123 (452)
+||-|+.+... ..+++... ..++..+|+++.
T Consensus 61 vVIlavp~~~~--~~vl~~l~~~l~~~~iViDvsSv 94 (437)
T PRK08655 61 IVIISVPINVT--EDVIKEVAPHVKEGSLLMDVTSV 94 (437)
T ss_pred EEEEecCHHHH--HHHHHHHHhhCCCCCEEEEcccc
Confidence 99999854322 33444333 345678999874
|
|
| >PRK08040 putative semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0035 Score=63.50 Aligned_cols=99 Identities=19% Similarity=0.212 Sum_probs=62.7
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 8 ~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
.+.++|.|+||||++|+.+.+.|.++.. |..++..+..+.+.-+.+. +. .. ....-|++ . ..++
T Consensus 2 ~~~~~vaIvGATG~vG~ellrlL~~~~h----P~~~l~~laS~~saG~~~~--~~----~~-~~~v~~~~---~--~~~~ 65 (336)
T PRK08040 2 SEGWNIALLGATGAVGEALLELLAERQF----PVGELYALASEESAGETLR--FG----GK-SVTVQDAA---E--FDWS 65 (336)
T ss_pred CCCCEEEEEccCCHHHHHHHHHHhcCCC----CceEEEEEEccCcCCceEE--EC----Cc-ceEEEeCc---h--hhcc
Confidence 4678999999999999999999998532 2256655543322111111 11 11 11111322 1 1236
Q ss_pred CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcH
Q 012947 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEP 124 (452)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~ 124 (452)
++|+|+.+++.- ....++....+.|+..||+++..
T Consensus 66 ~~Dvvf~a~p~~--~s~~~~~~~~~~g~~VIDlS~~f 100 (336)
T PRK08040 66 QAQLAFFVAGRE--ASAAYAEEATNAGCLVIDSSGLF 100 (336)
T ss_pred CCCEEEECCCHH--HHHHHHHHHHHCCCEEEECChHh
Confidence 799999998532 33577777788899999999865
|
|
| >cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.013 Score=56.30 Aligned_cols=34 Identities=18% Similarity=0.173 Sum_probs=28.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN 50 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~ 50 (452)
+.+|+|+|. |.+|..+++.|++.|. -++.+++.+
T Consensus 11 ~~~VlVvG~-GGvGs~va~~Lar~GV------g~i~LvD~D 44 (231)
T cd00755 11 NAHVAVVGL-GGVGSWAAEALARSGV------GKLTLIDFD 44 (231)
T ss_pred CCCEEEECC-CHHHHHHHHHHHHcCC------CEEEEECCC
Confidence 467999998 7799999999999984 477777754
|
coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK13301 putative L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.03 Score=54.60 Aligned_cols=118 Identities=18% Similarity=0.179 Sum_probs=76.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEE-EEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-HcC
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQ 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v-~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~-~~~ 88 (452)
++|.|+|. |.||+.+++.|.+.... .+++ .+.+|+.++.+++.+. +. . + .+++++ ..+
T Consensus 3 ~rvgiIG~-GaIG~~va~~l~~~~~~----~~~l~~V~~~~~~~~~~~~~~--------~~--~--~---~~l~~ll~~~ 62 (267)
T PRK13301 3 HRIAFIGL-GAIASDVAAGLLADAAQ----PCQLAALTRNAADLPPALAGR--------VA--L--L---DGLPGLLAWR 62 (267)
T ss_pred eEEEEECc-cHHHHHHHHHHhcCCCC----ceEEEEEecCCHHHHHHhhcc--------Cc--c--c---CCHHHHhhcC
Confidence 57889886 99999999998765321 1444 4456666666554331 11 1 2 235554 578
Q ss_pred ccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCC
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACG 150 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G 150 (452)
+|+||-|||+-.. ......++++|.+.+=+|--...-..+.+++.+.|++.|..|.-.+|
T Consensus 63 ~DlVVE~A~~~av--~e~~~~iL~~g~dlvv~SvGALaD~~~~~~l~~~A~~~g~~i~ipSG 122 (267)
T PRK13301 63 PDLVVEAAGQQAI--AEHAEGCLTAGLDMIICSAGALADDALRARLIAAAEAGGARIRVPAG 122 (267)
T ss_pred CCEEEECCCHHHH--HHHHHHHHhcCCCEEEEChhHhcCHHHHHHHHHHHHhCCCEEEEeCh
Confidence 9999999987443 45667788899998888732222233445567888888877554444
|
|
| >PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.11 Score=53.46 Aligned_cols=124 Identities=15% Similarity=0.165 Sum_probs=78.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEE--ecChhHHHHHHHHhCCCCCCCccEEEEeCC-----------
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA--GRNPTRVKQALQWASPSHSLSIPILTADTT----------- 77 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~ia--gR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~----------- 77 (452)
.+|.|+|+||.||+...+-+.++.. .++|..+ ++|.+++.+..++++. +. ++..|-.
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~-----~f~VvaLaa~~n~~~l~~q~~~f~p----~~-v~i~~~~~~~~l~~~l~~ 71 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPD-----RFRVVALSAGKNVELLAEQAREFRP----KY-VVVADEEAAKELKEALAA 71 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCcc-----ccEEEEEEcCCCHHHHHHHHHHhCC----CE-EEEcCHHHHHHHHHhhcc
Confidence 4799999999999999988876541 1565443 7899999999888752 11 1112211
Q ss_pred -------CHHHHHHHHc--CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcC
Q 012947 78 -------DPPSLHRLCS--QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSA 148 (452)
Q Consensus 78 -------d~~sl~~~~~--~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~ 148 (452)
-++.+.++++ ++|+|+++.+-+ .|....-+|+++|.+..=.+=|... ..-....+.+++.|+.|++-
T Consensus 72 ~~~~v~~G~~~~~~l~~~~~vD~Vv~Ai~G~--aGl~ptl~Ai~aGK~VaLANKEslV--~aG~~i~~~a~~~g~~i~PV 147 (385)
T PRK05447 72 AGIEVLAGEEGLCELAALPEADVVVAAIVGA--AGLLPTLAAIRAGKRIALANKESLV--CAGELVMDAAKKSGAQILPV 147 (385)
T ss_pred CCceEEEChhHHHHHhcCCCCCEEEEeCcCc--ccHHHHHHHHHCCCcEEEeCHHHHH--hhHHHHHHHHHHcCCeEEEE
Confidence 2345556655 469999987543 3345566788999775533333222 21234456677788888765
|
|
| >PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.014 Score=60.69 Aligned_cols=104 Identities=18% Similarity=0.151 Sum_probs=67.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC-------------------hhHHHHHHHHhCC-CCCCC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASP-SHSLS 68 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~-------------------~~kl~~l~~~l~~-~~~~~ 68 (452)
+..+|+|+|+ |.+|..++++|++.|. -++.+++.+ ..|.+.+.+.+.. ....+
T Consensus 41 ~~~~VlviG~-GGlGs~va~~La~~Gv------g~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~ 113 (392)
T PRK07878 41 KNARVLVIGA-GGLGSPTLLYLAAAGV------GTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVN 113 (392)
T ss_pred hcCCEEEECC-CHHHHHHHHHHHHcCC------CeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcE
Confidence 3567999998 7789999999999984 356665543 1233333333321 11223
Q ss_pred ccEEEEeCCCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEec
Q 012947 69 IPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 69 v~~v~~Dl~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDls 121 (452)
+..+...++ .+.+.++++++|+||.|..-+. ....+.++|.+.++.+|...
T Consensus 114 i~~~~~~i~-~~~~~~~~~~~D~Vvd~~d~~~-~r~~ln~~~~~~~~p~v~~~ 164 (392)
T PRK07878 114 VRLHEFRLD-PSNAVELFSQYDLILDGTDNFA-TRYLVNDAAVLAGKPYVWGS 164 (392)
T ss_pred EEEEeccCC-hhHHHHHHhcCCEEEECCCCHH-HHHHHHHHHHHcCCCEEEEE
Confidence 344444554 3567788899999999875432 22456788888888887654
|
|
| >PRK07340 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.0039 Score=62.43 Aligned_cols=102 Identities=12% Similarity=0.143 Sum_probs=72.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+++|+|+ |..|+..++.+....+ ..++.+.+|+.++.+++.+++.. ..+.+. . +++++++.++
T Consensus 125 ~~~v~IiGa-G~qa~~~~~al~~~~~-----~~~v~v~~r~~~~a~~~a~~~~~---~~~~~~---~---~~~~~av~~a 189 (304)
T PRK07340 125 PGDLLLIGT-GVQARAHLEAFAAGLP-----VRRVWVRGRTAASAAAFCAHARA---LGPTAE---P---LDGEAIPEAV 189 (304)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHhCC-----CCEEEEEcCCHHHHHHHHHHHHh---cCCeeE---E---CCHHHHhhcC
Confidence 457999997 9999999999986432 15899999999999999988742 122322 2 3456777899
Q ss_pred cEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHH
Q 012947 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERM 130 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~ 130 (452)
|+||+|.... +|+++..++.|+|..-+....+..+++
T Consensus 190 DiVitaT~s~----~Pl~~~~~~~g~hi~~iGs~~p~~~El 226 (304)
T PRK07340 190 DLVVTATTSR----TPVYPEAARAGRLVVAVGAFTPDMAEL 226 (304)
T ss_pred CEEEEccCCC----CceeCccCCCCCEEEecCCCCCCcccC
Confidence 9999987532 456666567788877776655555543
|
|
| >smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.0056 Score=52.46 Aligned_cols=98 Identities=12% Similarity=0.173 Sum_probs=58.2
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEE-ecChhHHHHHHHHhCCCCCCCcc-EEEEeCCCHHHHHHHHcCc
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWASPSHSLSIP-ILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~ia-gR~~~kl~~l~~~l~~~~~~~v~-~v~~Dl~d~~sl~~~~~~~ 89 (452)
++.|+|++|.+|+.+++.|.+... +++..+ +|+.++.+.+.... +++. ++..+++ .+.++ ..++
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~~~------~~l~av~~~~~~~~~~~~~~~-----~~~~~~~~~~~~-~~~~~--~~~~ 66 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHPD------FEVVALAASARSAGKRVSEAG-----PHLKGEVVLELE-PEDFE--ELAV 66 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcCCC------ceEEEEEechhhcCcCHHHHC-----cccccccccccc-cCChh--hcCC
Confidence 478999999999999999988631 555544 66554443333322 1221 1122222 12333 2589
Q ss_pred cEEeecCCCCCCCCHHH---HHHHHHhCCcEEEecCcHH
Q 012947 90 KLLLNCVGPYRLHGDPV---AAACVHSGCDYLDISGEPE 125 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~v---v~ac~~~g~~yvDlsge~~ 125 (452)
|+||.|.++-.. ..+ +..+.+.|...||+++...
T Consensus 67 DvV~~~~~~~~~--~~~~~~~~~~~~~g~~viD~s~~~~ 103 (122)
T smart00859 67 DIVFLALPHGVS--KEIAPLLPKAAEAGVKVIDLSSAFR 103 (122)
T ss_pred CEEEEcCCcHHH--HHHHHHHHhhhcCCCEEEECCcccc
Confidence 999999865322 221 2344577888888887543
|
The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase. |
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.016 Score=54.23 Aligned_cols=101 Identities=13% Similarity=0.193 Sum_probs=57.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC-------------------hhHHHHHHHHhCC-CCCCCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASP-SHSLSI 69 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~-------------------~~kl~~l~~~l~~-~~~~~v 69 (452)
..+|+|.|++| +|..+++.|+..|. -++.+++.+ ..|.+.+.+.+.. ....++
T Consensus 21 ~s~VlIiG~gg-lG~evak~La~~GV------g~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i 93 (197)
T cd01492 21 SARILLIGLKG-LGAEIAKNLVLSGI------GSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKV 93 (197)
T ss_pred hCcEEEEcCCH-HHHHHHHHHHHcCC------CEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEE
Confidence 46799999855 99999999999984 467777643 1233333333321 112233
Q ss_pred cEEEEeCCCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEe
Q 012947 70 PILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDI 120 (452)
Q Consensus 70 ~~v~~Dl~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDl 120 (452)
+.+...++ +...+.+++.|+||.|..+.. .-..+-+.|.+.++.+|..
T Consensus 94 ~~~~~~~~--~~~~~~~~~~dvVi~~~~~~~-~~~~ln~~c~~~~ip~i~~ 141 (197)
T cd01492 94 SVDTDDIS--EKPEEFFSQFDVVVATELSRA-ELVKINELCRKLGVKFYAT 141 (197)
T ss_pred EEEecCcc--ccHHHHHhCCCEEEECCCCHH-HHHHHHHHHHHcCCCEEEE
Confidence 33333343 224556778888888765422 1134555666655554443
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >PRK08618 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.011 Score=59.87 Aligned_cols=102 Identities=12% Similarity=0.142 Sum_probs=70.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..++.|+|+ |.+|+..++.++.... .-++.+.+|++++.+++.+++.. ...+.+.. ++| +++++.++
T Consensus 127 ~~~v~iiGa-G~~a~~~~~al~~~~~-----~~~v~v~~r~~~~a~~~~~~~~~--~~~~~~~~--~~~---~~~~~~~a 193 (325)
T PRK08618 127 AKTLCLIGT-GGQAKGQLEAVLAVRD-----IERVRVYSRTFEKAYAFAQEIQS--KFNTEIYV--VNS---ADEAIEEA 193 (325)
T ss_pred CcEEEEECC-cHHHHHHHHHHHhcCC-----ccEEEEECCCHHHHHHHHHHHHH--hcCCcEEE--eCC---HHHHHhcC
Confidence 457999997 7889999888765421 15899999999999998887742 11233333 233 56777899
Q ss_pred cEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHH
Q 012947 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFME 128 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~ 128 (452)
|+||+|..-. .++++.+++.|+|.+-+....+..+
T Consensus 194 DiVi~aT~s~----~p~i~~~l~~G~hV~~iGs~~p~~~ 228 (325)
T PRK08618 194 DIIVTVTNAK----TPVFSEKLKKGVHINAVGSFMPDMQ 228 (325)
T ss_pred CEEEEccCCC----CcchHHhcCCCcEEEecCCCCcccc
Confidence 9999987422 3444478889999777755444433
|
|
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.022 Score=59.62 Aligned_cols=70 Identities=16% Similarity=0.238 Sum_probs=56.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+++|+|+ |-+|+.++++|...|. .++.+++|+.++++++.++++. ..+ +.+++.+.+.++
T Consensus 180 ~~~VlViGa-G~iG~~~a~~L~~~G~------~~V~v~~rs~~ra~~la~~~g~------~~i-----~~~~l~~~l~~a 241 (417)
T TIGR01035 180 GKKALLIGA-GEMGELVAKHLLRKGV------GKILIANRTYERAEDLAKELGG------EAV-----KFEDLEEYLAEA 241 (417)
T ss_pred CCEEEEECC-hHHHHHHHHHHHHCCC------CEEEEEeCCHHHHHHHHHHcCC------eEe-----eHHHHHHHHhhC
Confidence 468999997 9999999999998873 5899999999998888776631 111 234677888899
Q ss_pred cEEeecCC
Q 012947 90 KLLLNCVG 97 (452)
Q Consensus 90 dvVIn~aG 97 (452)
|+||+|.|
T Consensus 242 DvVi~aT~ 249 (417)
T TIGR01035 242 DIVISSTG 249 (417)
T ss_pred CEEEECCC
Confidence 99999986
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.018 Score=55.41 Aligned_cols=102 Identities=9% Similarity=0.100 Sum_probs=63.6
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh-------------------hHHHHHHHHhCC-CCCCCccE
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-------------------TRVKQALQWASP-SHSLSIPI 71 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~-------------------~kl~~l~~~l~~-~~~~~v~~ 71 (452)
+|+|.|+ |.+|..+++.|+..|- -++.+++.+. .|.+.+.+.+.. ....++..
T Consensus 1 kVlvvG~-GGlG~eilk~La~~Gv------g~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~ 73 (234)
T cd01484 1 KVLLVGA-GGIGCELLKNLALMGF------GQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVP 73 (234)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCC------CeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEE
Confidence 4889997 7899999999999984 4677766542 233333333321 11233445
Q ss_pred EEEeCCCHHHH-HHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEec
Q 012947 72 LTADTTDPPSL-HRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 72 v~~Dl~d~~sl-~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDls 121 (452)
+..++.+.+.. ...+++.|+||++..-.. ....+-+.|...++.+||..
T Consensus 74 ~~~~i~~~~~~~~~f~~~~DvVi~a~Dn~~-aR~~ln~~c~~~~iplI~~g 123 (234)
T cd01484 74 YQNKVGPEQDFNDTFFEQFHIIVNALDNII-ARRYVNGMLIFLIVPLIESG 123 (234)
T ss_pred EeccCChhhhchHHHHhCCCEEEECCCCHH-HHHHHHHHHHHcCCCEEEEc
Confidence 55566543333 467889999999875332 12456677777777777653
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou |
| >cd05290 LDH_3 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.047 Score=54.80 Aligned_cols=128 Identities=16% Similarity=0.246 Sum_probs=81.0
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC--CCC--CCccEEEEeCCCHHHHHHHHc
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--SHS--LSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~--~~~--~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
+|.|+|| |.+|..++-.|+..+-. -++++.++++++++....++.. ... .++.+. . .| .+.++
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~~~-----~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~-~--~~----y~~~~ 67 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALGLF-----SEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIR-A--GD----YDDCA 67 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcCCC-----CEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEE-E--CC----HHHhC
Confidence 5889999 99999999999987621 3799999999888777776642 101 122333 2 23 45688
Q ss_pred CccEEeecCCCCCCCCHH--HHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhh
Q 012947 88 QTKLLLNCVGPYRLHGDP--VAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSR 165 (452)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~--vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~ 165 (452)
++|+||-+||.....++. =.+.... ....++.+.+...+.+ -.++.|+- +-|-|+.+|.+.+
T Consensus 68 ~aDivvitaG~~~kpg~tr~R~dll~~----------N~~I~~~i~~~i~~~~-p~~i~ivv-----sNPvDv~t~~~~k 131 (307)
T cd05290 68 DADIIVITAGPSIDPGNTDDRLDLAQT----------NAKIIREIMGNITKVT-KEAVIILI-----TNPLDIAVYIAAT 131 (307)
T ss_pred CCCEEEECCCCCCCCCCCchHHHHHHH----------HHHHHHHHHHHHHHhC-CCeEEEEe-----cCcHHHHHHHHHH
Confidence 999999999975544421 0111111 1234445544444433 23444443 4688999999888
Q ss_pred hcC
Q 012947 166 QWI 168 (452)
Q Consensus 166 ~~~ 168 (452)
...
T Consensus 132 ~sg 134 (307)
T cd05290 132 EFD 134 (307)
T ss_pred HhC
Confidence 764
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.038 Score=55.51 Aligned_cols=83 Identities=18% Similarity=0.065 Sum_probs=55.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
++|.|+||+|.+|..++-.|+..+-. .++++.+++ +++....++.. ......+.... ..+++.+.++++|
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~-----~elvLiDi~--~a~g~alDL~~-~~~~~~i~~~~--~~~~~y~~~~daD 70 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLV-----SELALYDIV--NTPGVAADLSH-INTPAKVTGYL--GPEELKKALKGAD 70 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCC-----cEEEEEecC--ccceeehHhHh-CCCcceEEEec--CCCchHHhcCCCC
Confidence 48999999999999999998877621 479999998 55444444431 01112222111 1233667889999
Q ss_pred EEeecCCCCCCCC
Q 012947 91 LLLNCVGPYRLHG 103 (452)
Q Consensus 91 vVIn~aGp~~~~~ 103 (452)
+||-+||.-...+
T Consensus 71 ivvitaG~~~k~g 83 (310)
T cd01337 71 VVVIPAGVPRKPG 83 (310)
T ss_pred EEEEeCCCCCCCC
Confidence 9999999754443
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.018 Score=60.43 Aligned_cols=75 Identities=23% Similarity=0.272 Sum_probs=63.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH-HHcC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHR-LCSQ 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~-~~~~ 88 (452)
+.+++|+|+ |.+|+.+++.|.+.+ .++.++++++++.+++.++. .++.++.+|.+|++.+++ -+++
T Consensus 231 ~~~iiIiG~-G~~g~~l~~~L~~~~-------~~v~vid~~~~~~~~~~~~~-----~~~~~i~gd~~~~~~L~~~~~~~ 297 (453)
T PRK09496 231 VKRVMIVGG-GNIGYYLAKLLEKEG-------YSVKLIERDPERAEELAEEL-----PNTLVLHGDGTDQELLEEEGIDE 297 (453)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCC-------CeEEEEECCHHHHHHHHHHC-----CCCeEEECCCCCHHHHHhcCCcc
Confidence 467999998 999999999999887 78999999999988777653 356789999999999865 4678
Q ss_pred ccEEeecCC
Q 012947 89 TKLLLNCVG 97 (452)
Q Consensus 89 ~dvVIn~aG 97 (452)
+|.||.+.+
T Consensus 298 a~~vi~~~~ 306 (453)
T PRK09496 298 ADAFIALTN 306 (453)
T ss_pred CCEEEECCC
Confidence 999987764
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.0035 Score=60.11 Aligned_cols=80 Identities=16% Similarity=0.106 Sum_probs=55.0
Q ss_pred HHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc----CccEEeecCCCCCC
Q 012947 26 VVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS----QTKLLLNCVGPYRL 101 (452)
Q Consensus 26 va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~----~~dvVIn~aGp~~~ 101 (452)
+++.|+++| ++|++++|+.++++. ..++.+|++|.++++++++ ++|+||||||....
T Consensus 1 ~a~~l~~~G-------~~Vv~~~r~~~~~~~------------~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~ 61 (241)
T PRK12428 1 TARLLRFLG-------ARVIGVDRREPGMTL------------DGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGT 61 (241)
T ss_pred ChHHHHhCC-------CEEEEEeCCcchhhh------------hHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCC
Confidence 478888888 799999999876421 2356899999999999887 47999999996532
Q ss_pred CCHHHHHHHHHhCCcEEEecCcHHHHHHHHH
Q 012947 102 HGDPVAAACVHSGCDYLDISGEPEFMERMEA 132 (452)
Q Consensus 102 ~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~ 132 (452)
.. .+ .+.-+++.+....++.+.+
T Consensus 62 ~~---~~-----~~~~vN~~~~~~l~~~~~~ 84 (241)
T PRK12428 62 AP---VE-----LVARVNFLGLRHLTEALLP 84 (241)
T ss_pred CC---HH-----HhhhhchHHHHHHHHHHHH
Confidence 11 11 1223455565555555543
|
|
| >PRK14851 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.016 Score=63.98 Aligned_cols=105 Identities=11% Similarity=0.103 Sum_probs=71.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC-------------------hhHHHHHHHHhCC-CCCCC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASP-SHSLS 68 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~-------------------~~kl~~l~~~l~~-~~~~~ 68 (452)
++.+|+|.|+ |++|..+++.|++.|- -++.+++-+ ..|.+.+.+.+.. ....+
T Consensus 42 ~~~~VlIvG~-GGlGs~va~~Lar~GV------G~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~ 114 (679)
T PRK14851 42 AEAKVAIPGM-GGVGGVHLITMVRTGI------GRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLE 114 (679)
T ss_pred hcCeEEEECc-CHHHHHHHHHHHHhCC------CeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCe
Confidence 3568999997 7899999999999984 356666543 1233333333321 12334
Q ss_pred ccEEEEeCCCHHHHHHHHcCccEEeecCCCCCC-CCHHHHHHHHHhCCcEEEec
Q 012947 69 IPILTADTTDPPSLHRLCSQTKLLLNCVGPYRL-HGDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 69 v~~v~~Dl~d~~sl~~~~~~~dvVIn~aGp~~~-~~~~vv~ac~~~g~~yvDls 121 (452)
+..+...++ ++.+.++++++|+||+|.-.+.. ....+.+.|.+.++.+|+..
T Consensus 115 I~~~~~~i~-~~n~~~~l~~~DvVid~~D~~~~~~r~~l~~~c~~~~iP~i~~g 167 (679)
T PRK14851 115 ITPFPAGIN-ADNMDAFLDGVDVVLDGLDFFQFEIRRTLFNMAREKGIPVITAG 167 (679)
T ss_pred EEEEecCCC-hHHHHHHHhCCCEEEECCCCCcHHHHHHHHHHHHHCCCCEEEee
Confidence 555556665 57789999999999999854321 12468889999998888654
|
|
| >PRK11559 garR tartronate semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.018 Score=57.06 Aligned_cols=111 Identities=21% Similarity=0.275 Sum_probs=70.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
++|.|+|. |.+|+.+++.|++.+ ++|.+.+|+.++.+++.+. .+. . . .+.+++++++|
T Consensus 3 ~~IgviG~-G~mG~~~a~~l~~~g-------~~v~~~d~~~~~~~~~~~~-------g~~--~--~---~~~~e~~~~~d 60 (296)
T PRK11559 3 MKVGFIGL-GIMGKPMSKNLLKAG-------YSLVVYDRNPEAVAEVIAA-------GAE--T--A---STAKAVAEQCD 60 (296)
T ss_pred ceEEEEcc-CHHHHHHHHHHHHCC-------CeEEEEcCCHHHHHHHHHC-------CCe--e--c---CCHHHHHhcCC
Confidence 47999985 999999999999987 7899999999988765541 111 1 1 23456678999
Q ss_pred EEeecCCCCCCCCHHHH------HHHHHhCCcEEEecCcHHHH-HHHHHHHHHHHHhCccEEEcC
Q 012947 91 LLLNCVGPYRLHGDPVA------AACVHSGCDYLDISGEPEFM-ERMEARYHEKAVETGSLLVSA 148 (452)
Q Consensus 91 vVIn~aGp~~~~~~~vv------~ac~~~g~~yvDlsge~~~~-~~~~~~~~~~A~~~gv~iv~~ 148 (452)
+||-|+.... .-..++ ......+..+||++...+-. +++ .+..++.|+.++.+
T Consensus 61 ~vi~~vp~~~-~~~~v~~~~~~~~~~~~~g~iiid~st~~~~~~~~l----~~~~~~~g~~~~d~ 120 (296)
T PRK11559 61 VIITMLPNSP-HVKEVALGENGIIEGAKPGTVVIDMSSIAPLASREI----AAALKAKGIEMLDA 120 (296)
T ss_pred EEEEeCCCHH-HHHHHHcCcchHhhcCCCCcEEEECCCCCHHHHHHH----HHHHHHcCCcEEEc
Confidence 9999984321 111222 11224466789988765532 333 33344456665544
|
|
| >PRK07411 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.016 Score=60.14 Aligned_cols=103 Identities=10% Similarity=0.065 Sum_probs=68.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC-------------------hhHHHHHHHHhCC-CCCCCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASP-SHSLSI 69 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~-------------------~~kl~~l~~~l~~-~~~~~v 69 (452)
..+|+|+|+ |.+|..++++|++.|. -++.+++.+ ..|.+.+.+.+.. ....++
T Consensus 38 ~~~VlivG~-GGlG~~va~~La~~Gv------g~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v 110 (390)
T PRK07411 38 AASVLCIGT-GGLGSPLLLYLAAAGI------GRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQV 110 (390)
T ss_pred cCcEEEECC-CHHHHHHHHHHHHcCC------CEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeE
Confidence 467999998 6789999999999984 356665543 1233344444422 122344
Q ss_pred cEEEEeCCCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEec
Q 012947 70 PILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 70 ~~v~~Dl~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDls 121 (452)
..+...++ ++...+.++++|+||.|...+.. -..+.++|.+.++.+|..+
T Consensus 111 ~~~~~~~~-~~~~~~~~~~~D~Vvd~~d~~~~-r~~ln~~~~~~~~p~v~~~ 160 (390)
T PRK07411 111 DLYETRLS-SENALDILAPYDVVVDGTDNFPT-RYLVNDACVLLNKPNVYGS 160 (390)
T ss_pred EEEecccC-HHhHHHHHhCCCEEEECCCCHHH-HHHHHHHHHHcCCCEEEEE
Confidence 44544554 35677889999999999875532 2457789999988877553
|
|
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.032 Score=53.01 Aligned_cols=96 Identities=19% Similarity=0.163 Sum_probs=67.5
Q ss_pred CCeEEEEcCC--chHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 10 LFDVIILGAS--GFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 10 ~~~ilV~GAT--G~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
..+++|+|-. --|+-.|++.|.++| .+++....++ ++++-++++.. ......++.||++|.++++++++
T Consensus 6 GK~~lI~Gvan~rSIAwGIAk~l~~~G-------AeL~fTy~~e-~l~krv~~la~-~~~s~~v~~cDV~~d~~i~~~f~ 76 (259)
T COG0623 6 GKRILIMGVANNRSIAWGIAKALAEQG-------AELAFTYQGE-RLEKRVEELAE-ELGSDLVLPCDVTNDESIDALFA 76 (259)
T ss_pred CceEEEEEecccccHHHHHHHHHHHcC-------CEEEEEeccH-HHHHHHHHHHh-hccCCeEEecCCCCHHHHHHHHH
Confidence 3578999865 358999999999999 7888888766 55444444432 11234678999999999998887
Q ss_pred -------CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCc
Q 012947 88 -------QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGE 123 (452)
Q Consensus 88 -------~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge 123 (452)
..|.|||+.+..... +..-+|+|++-|
T Consensus 77 ~i~~~~g~lD~lVHsIaFa~k~---------el~G~~~dtsre 110 (259)
T COG0623 77 TIKKKWGKLDGLVHSIAFAPKE---------ELKGDYLDTSRE 110 (259)
T ss_pred HHHHhhCcccEEEEEeccCChH---------HhCCcccccCHH
Confidence 469999999733211 223468885543
|
|
| >PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.081 Score=52.76 Aligned_cols=112 Identities=17% Similarity=0.092 Sum_probs=68.4
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCccE
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKL 91 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~dv 91 (452)
+|.|+|. |-+|+.+++.|++.+ ++|.+.+|++++.+++.+ .+ +. . ..+++++.+.++.+|+
T Consensus 2 ~Ig~IGl-G~MG~~mA~~L~~~g-------~~v~v~dr~~~~~~~~~~-~g------~~--~--~~~~~e~~~~~~~~dv 62 (301)
T PRK09599 2 QLGMIGL-GRMGGNMARRLLRGG-------HEVVGYDRNPEAVEALAE-EG------AT--G--ADSLEELVAKLPAPRV 62 (301)
T ss_pred EEEEEcc-cHHHHHHHHHHHHCC-------CeEEEEECCHHHHHHHHH-CC------Ce--e--cCCHHHHHhhcCCCCE
Confidence 6888985 999999999999988 789999999999877654 21 11 1 2244444333334688
Q ss_pred EeecCCCCCCCCHHHHHHHH---HhCCcEEEecCcHH-HHHHHHHHHHHHHHhCccEEEc
Q 012947 92 LLNCVGPYRLHGDPVAAACV---HSGCDYLDISGEPE-FMERMEARYHEKAVETGSLLVS 147 (452)
Q Consensus 92 VIn~aGp~~~~~~~vv~ac~---~~g~~yvDlsge~~-~~~~~~~~~~~~A~~~gv~iv~ 147 (452)
||.++.+.. .-..+++.+. ..+..+||.+...+ ..+++ .+.+++.|+..+-
T Consensus 63 vi~~v~~~~-~~~~v~~~l~~~l~~g~ivid~st~~~~~~~~~----~~~~~~~g~~~~d 117 (301)
T PRK09599 63 VWLMVPAGE-ITDATIDELAPLLSPGDIVIDGGNSYYKDDIRR----AELLAEKGIHFVD 117 (301)
T ss_pred EEEEecCCc-HHHHHHHHHHhhCCCCCEEEeCCCCChhHHHHH----HHHHHHcCCEEEe
Confidence 888774321 1133333332 23455788754333 33332 3555666777663
|
|
| >TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.034 Score=55.45 Aligned_cols=112 Identities=17% Similarity=0.071 Sum_probs=69.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
++|.|+|. |.+|..+++.|++.+ ++|.+.+|++++.+++.+.- .. ...+.+++.+.++++|
T Consensus 1 M~Ig~IGl-G~mG~~la~~L~~~g-------~~V~~~dr~~~~~~~l~~~g-------~~----~~~s~~~~~~~~~~~d 61 (298)
T TIGR00872 1 MQLGLIGL-GRMGANIVRRLAKRG-------HDCVGYDHDQDAVKAMKEDR-------TT----GVANLRELSQRLSAPR 61 (298)
T ss_pred CEEEEEcc-hHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHcC-------Cc----ccCCHHHHHhhcCCCC
Confidence 36889986 999999999999988 79999999999988776521 11 1134555555666788
Q ss_pred EEeecCCCCCCCCHHHHHHHH---HhCCcEEEecCcH-HHHHHHHHHHHHHHHhCccEEEc
Q 012947 91 LLLNCVGPYRLHGDPVAAACV---HSGCDYLDISGEP-EFMERMEARYHEKAVETGSLLVS 147 (452)
Q Consensus 91 vVIn~aGp~~~~~~~vv~ac~---~~g~~yvDlsge~-~~~~~~~~~~~~~A~~~gv~iv~ 147 (452)
+||.|+-+. .-..+++... ..+..+||.+... .-..+. .+..++.|+..+-
T Consensus 62 vIi~~vp~~--~~~~v~~~l~~~l~~g~ivid~st~~~~~t~~~----~~~~~~~g~~~vd 116 (298)
T TIGR00872 62 VVWVMVPHG--IVDAVLEELAPTLEKGDIVIDGGNSYYKDSLRR----YKLLKEKGIHLLD 116 (298)
T ss_pred EEEEEcCch--HHHHHHHHHHhhCCCCCEEEECCCCCcccHHHH----HHHHHhcCCeEEe
Confidence 888877432 1133333322 2344577776543 222222 2334455666553
|
This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle. |
| >PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.014 Score=56.67 Aligned_cols=97 Identities=12% Similarity=0.207 Sum_probs=71.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--C
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--Q 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--~ 88 (452)
|+|+|+|||+= |+.+++.|.+.+ . +.+..-..-.. ++... ......++.+-+.|.+.+.+.++ +
T Consensus 1 m~ILvlgGTtE-~r~la~~L~~~g-------~-v~~sv~t~~g~-~~~~~----~~~~~~v~~G~lg~~~~l~~~l~~~~ 66 (249)
T PF02571_consen 1 MKILVLGGTTE-GRKLAERLAEAG-------Y-VIVSVATSYGG-ELLKP----ELPGLEVRVGRLGDEEGLAEFLRENG 66 (249)
T ss_pred CEEEEEechHH-HHHHHHHHHhcC-------C-EEEEEEhhhhH-hhhcc----ccCCceEEECCCCCHHHHHHHHHhCC
Confidence 58999999975 999999999988 4 33333222221 11111 12356777887879999999996 7
Q ss_pred ccEEeecCCCCCC-CCHHHHHHHHHhCCcEEEec
Q 012947 89 TKLLLNCVGPYRL-HGDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 89 ~dvVIn~aGp~~~-~~~~vv~ac~~~g~~yvDls 121 (452)
+++||+..-||.. -..++.++|.+.|+.|+-+-
T Consensus 67 i~~vIDATHPfA~~is~na~~a~~~~~ipylR~e 100 (249)
T PF02571_consen 67 IDAVIDATHPFAAEISQNAIEACRELGIPYLRFE 100 (249)
T ss_pred CcEEEECCCchHHHHHHHHHHHHhhcCcceEEEE
Confidence 8999999999864 34789999999999998774
|
Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process |
| >cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2 | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.018 Score=57.72 Aligned_cols=102 Identities=15% Similarity=0.213 Sum_probs=68.9
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC-------------------hhHHHHHHHHhCC-CCCCCccE
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASP-SHSLSIPI 71 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~-------------------~~kl~~l~~~l~~-~~~~~v~~ 71 (452)
+|+|.|+ |++|..+++.|+..|. -++.+++.+ ..|.+.+.+.+.. ....++..
T Consensus 1 kVlIVGa-GGlG~EiaKnLal~Gv------g~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~ 73 (312)
T cd01489 1 KVLVVGA-GGIGCELLKNLVLTGF------GEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVA 73 (312)
T ss_pred CEEEECC-CHHHHHHHHHHHHhcC------CeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEE
Confidence 5899998 8899999999999984 467776643 1233333333321 12234455
Q ss_pred EEEeCCCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEec
Q 012947 72 LTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 72 v~~Dl~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDls 121 (452)
+..++.+.....+.+++.|+||++.-.... ...+-+.|.+.++.+|+..
T Consensus 74 ~~~~i~~~~~~~~f~~~~DvVv~a~Dn~~a-r~~in~~c~~~~ip~I~~g 122 (312)
T cd01489 74 YHANIKDPDFNVEFFKQFDLVFNALDNLAA-RRHVNKMCLAADVPLIESG 122 (312)
T ss_pred EeccCCCccchHHHHhcCCEEEECCCCHHH-HHHHHHHHHHCCCCEEEEe
Confidence 556676644445788999999999864332 2568899999999999864
|
UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2. |
| >PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.062 Score=45.37 Aligned_cols=109 Identities=24% Similarity=0.289 Sum_probs=73.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEE-EEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v-~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
++|.|+|+ |.+|+...+.+.+..+ ..++ .++++++++.+++.+.++ +. . .+| ++++++
T Consensus 1 i~v~iiG~-G~~g~~~~~~~~~~~~-----~~~v~~v~d~~~~~~~~~~~~~~------~~-~---~~~---~~~ll~~~ 61 (120)
T PF01408_consen 1 IRVGIIGA-GSIGRRHLRALLRSSP-----DFEVVAVCDPDPERAEAFAEKYG------IP-V---YTD---LEELLADE 61 (120)
T ss_dssp EEEEEEST-SHHHHHHHHHHHHTTT-----TEEEEEEECSSHHHHHHHHHHTT------SE-E---ESS---HHHHHHHT
T ss_pred CEEEEECC-cHHHHHHHHHHHhcCC-----CcEEEEEEeCCHHHHHHHHHHhc------cc-c---hhH---HHHHHHhh
Confidence 47899998 7779999999988853 1554 588999999988877663 23 2 223 566665
Q ss_pred CccEEeecCCCCCCCCHHHHHHHHHhCCc-EEEe--cCcHHHHHHHHHHHHHHHHhCccE
Q 012947 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCD-YLDI--SGEPEFMERMEARYHEKAVETGSL 144 (452)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~ac~~~g~~-yvDl--sge~~~~~~~~~~~~~~A~~~gv~ 144 (452)
+.|+|+-+..+.. + ..++..|++.|.| +++= +-...-. .++.+.++++|+.
T Consensus 62 ~~D~V~I~tp~~~-h-~~~~~~~l~~g~~v~~EKP~~~~~~~~----~~l~~~a~~~~~~ 115 (120)
T PF01408_consen 62 DVDAVIIATPPSS-H-AEIAKKALEAGKHVLVEKPLALTLEEA----EELVEAAKEKGVK 115 (120)
T ss_dssp TESEEEEESSGGG-H-HHHHHHHHHTTSEEEEESSSSSSHHHH----HHHHHHHHHHTSC
T ss_pred cCCEEEEecCCcc-h-HHHHHHHHHcCCEEEEEcCCcCCHHHH----HHHHHHHHHhCCE
Confidence 7999998885533 2 6889999999996 4442 2222222 3445566666654
|
GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A .... |
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.019 Score=54.59 Aligned_cols=76 Identities=16% Similarity=0.174 Sum_probs=52.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~-~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
++|.|+||+|.+|+.++..|++.+ ++|.+.+|++++++.+.+..... ....+... .-..+ ..+.++++
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G-------~~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~-~~~~~---~~ea~~~a 69 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAG-------NKIIIGSRDLEKAEEAAAKALEELGHGGSDIK-VTGAD---NAEAAKRA 69 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCC-------CEEEEEEcCHHHHHHHHHHHHhhccccCCCce-EEEeC---hHHHHhcC
Confidence 479999999999999999999988 78999999999987776543100 00011100 11112 24557789
Q ss_pred cEEeecCC
Q 012947 90 KLLLNCVG 97 (452)
Q Consensus 90 dvVIn~aG 97 (452)
|+||-++-
T Consensus 70 DvVilavp 77 (219)
T TIGR01915 70 DVVILAVP 77 (219)
T ss_pred CEEEEECC
Confidence 99999884
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >PRK08057 cobalt-precorrin-6x reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.018 Score=55.94 Aligned_cols=94 Identities=19% Similarity=0.257 Sum_probs=73.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--C
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--Q 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--~ 88 (452)
.+|+|+|||+= |+.+++.|.+.+ +++.+..-.+... . ....+.++.+-+.|.+++.+.++ +
T Consensus 3 ~~IlvlgGT~e-gr~la~~L~~~g-------~~v~~Svat~~g~---~------~~~~~~v~~G~l~~~~~l~~~l~~~~ 65 (248)
T PRK08057 3 PRILLLGGTSE-ARALARALAAAG-------VDIVLSLAGRTGG---P------ADLPGPVRVGGFGGAEGLAAYLREEG 65 (248)
T ss_pred ceEEEEechHH-HHHHHHHHHhCC-------CeEEEEEccCCCC---c------ccCCceEEECCCCCHHHHHHHHHHCC
Confidence 57999999975 999999999887 5555544333221 1 12356778888879999999997 7
Q ss_pred ccEEeecCCCCCCC-CHHHHHHHHHhCCcEEEec
Q 012947 89 TKLLLNCVGPYRLH-GDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 89 ~dvVIn~aGp~~~~-~~~vv~ac~~~g~~yvDls 121 (452)
+++||+..-||... ..++.++|.+.++.|+-+-
T Consensus 66 i~~VIDATHPfA~~is~~a~~ac~~~~ipyiR~e 99 (248)
T PRK08057 66 IDLVIDATHPYAAQISANAAAACRALGIPYLRLE 99 (248)
T ss_pred CCEEEECCCccHHHHHHHHHHHHHHhCCcEEEEe
Confidence 89999999998643 4789999999999999875
|
|
| >PRK06153 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.022 Score=58.40 Aligned_cols=101 Identities=17% Similarity=0.170 Sum_probs=64.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC----------------------hhHHHHHHHHhCCCCCC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN----------------------PTRVKQALQWASPSHSL 67 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~----------------------~~kl~~l~~~l~~~~~~ 67 (452)
..+|+|+|+ |++|..+++.|++.|. -++.+++-+ ..|.+.+.+.+.. ...
T Consensus 176 ~~~VaIVG~-GG~GS~Va~~LAR~GV------geI~LVD~D~Ve~SNLnRQ~gaf~~~DvGk~~~KVevaa~rl~~-in~ 247 (393)
T PRK06153 176 GQRIAIIGL-GGTGSYILDLVAKTPV------REIHLFDGDDFLQHNAFRSPGAASIEELREAPKKVDYFKSRYSN-MRR 247 (393)
T ss_pred hCcEEEEcC-CccHHHHHHHHHHcCC------CEEEEECCCEecccccccccccCCHhHcCCcchHHHHHHHHHHH-hCC
Confidence 468999998 7789999999999984 466665543 1344334333321 112
Q ss_pred CccEEEEeCCCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEec
Q 012947 68 SIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 68 ~v~~v~~Dl~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDls 121 (452)
++..+...+ +++.+. .+.++|+||.|+.-... ...+.+.|.+.++.+||+.
T Consensus 248 ~I~~~~~~I-~~~n~~-~L~~~DiV~dcvDn~~a-R~~ln~~a~~~gIP~Id~G 298 (393)
T PRK06153 248 GIVPHPEYI-DEDNVD-ELDGFTFVFVCVDKGSS-RKLIVDYLEALGIPFIDVG 298 (393)
T ss_pred eEEEEeecC-CHHHHH-HhcCCCEEEEcCCCHHH-HHHHHHHHHHcCCCEEEee
Confidence 344444445 556555 56889999998853221 1346677888777777764
|
|
| >TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.024 Score=56.21 Aligned_cols=109 Identities=17% Similarity=0.193 Sum_probs=68.2
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCccE
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKL 91 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~dv 91 (452)
+|.|+|. |.+|..+++.|++.+ ++|.+.+|+.++.+++.+. + .. ...+..++++++|+
T Consensus 1 ~IgvIG~-G~mG~~iA~~l~~~G-------~~V~~~dr~~~~~~~~~~~-g------~~-------~~~~~~~~~~~aDi 58 (291)
T TIGR01505 1 KVGFIGL-GIMGSPMSINLAKAG-------YQLHVTTIGPEVADELLAA-G------AV-------TAETARQVTEQADV 58 (291)
T ss_pred CEEEEEe-cHHHHHHHHHHHHCC-------CeEEEEcCCHHHHHHHHHC-C------Cc-------ccCCHHHHHhcCCE
Confidence 3778875 999999999999988 7999999999988776542 1 11 11235677889999
Q ss_pred EeecCCCCCCCCHHHH---HHHH---HhCCcEEEecCcHHH-HHHHHHHHHHHHHhCccEEEc
Q 012947 92 LLNCVGPYRLHGDPVA---AACV---HSGCDYLDISGEPEF-MERMEARYHEKAVETGSLLVS 147 (452)
Q Consensus 92 VIn~aGp~~~~~~~vv---~ac~---~~g~~yvDlsge~~~-~~~~~~~~~~~A~~~gv~iv~ 147 (452)
||.|+... ..-..++ +.+. ..+..+||.+...+- .+++ .+..++.|+.++.
T Consensus 59 vi~~vp~~-~~~~~v~~~~~~~~~~~~~g~iivd~st~~~~~~~~l----~~~l~~~g~~~~~ 116 (291)
T TIGR01505 59 IFTMVPDS-PQVEEVAFGENGIIEGAKPGKTLVDMSSISPIESKRF----AKAVKEKGIDYLD 116 (291)
T ss_pred EEEecCCH-HHHHHHHcCcchHhhcCCCCCEEEECCCCCHHHHHHH----HHHHHHcCCCEEe
Confidence 99998431 1111121 1111 235568887655442 2233 3334445666664
|
This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism. |
| >TIGR01761 thiaz-red thiazolinyl imide reductase | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.049 Score=55.46 Aligned_cols=115 Identities=15% Similarity=0.209 Sum_probs=75.5
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceE-EEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKS-LALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~-v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
.+++|.|+|+ |+ |+.-++.+.+..+ + .+ +++++|+.++.+++.++++ +.. .+| ++++++
T Consensus 2 ~~~rVgViG~-~~-G~~h~~al~~~~~-~----~eLvaV~d~~~erA~~~A~~~g------i~~----y~~---~eell~ 61 (343)
T TIGR01761 2 DVQSVVVCGT-RF-GQFYLAAFAAAPE-R----FELAGILAQGSERSRALAHRLG------VPL----YCE---VEELPD 61 (343)
T ss_pred CCcEEEEEeH-HH-HHHHHHHHHhCCC-C----cEEEEEEcCCHHHHHHHHHHhC------CCc----cCC---HHHHhc
Confidence 3579999999 76 9888888876531 1 33 6778999999999988773 221 233 556666
Q ss_pred CccEEeecCCC--CCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEE
Q 012947 88 QTKLLLNCVGP--YRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLV 146 (452)
Q Consensus 88 ~~dvVIn~aGp--~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv 146 (452)
+.|+++-++.. .......++.+|+++|.|.+= |-++..+-..++-+.|+++|+.+.
T Consensus 62 d~Di~~V~ipt~~P~~~H~e~a~~aL~aGkHVL~---EKPla~~Ea~el~~~A~~~g~~l~ 119 (343)
T TIGR01761 62 DIDIACVVVRSAIVGGQGSALARALLARGIHVLQ---EHPLHPRDIQDLLRLAERQGRRYL 119 (343)
T ss_pred CCCEEEEEeCCCCCCccHHHHHHHHHhCCCeEEE---cCCCCHHHHHHHHHHHHHcCCEEE
Confidence 66655554421 112337899999999998541 323223334666778888888755
|
This reductase is found associated with gene clusters for the biosynthesis of various non-ribosomal peptide derived natural products in which cysteine is cyclized to a thiazoline ring containing an imide double bond. Examples include yersiniabactin (irp3/YbtU) and pyochelin (PchG). |
| >COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.067 Score=52.95 Aligned_cols=106 Identities=16% Similarity=0.237 Sum_probs=69.5
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCccE
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKL 91 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~dv 91 (452)
+|-++| .|-.|..++.+|++.| +.+.+.+|+++|..+.+...+. . -.++..++++++|+
T Consensus 2 kIafIG-LG~MG~pmA~~L~~aG-------~~v~v~~r~~~ka~~~~~~~Ga------~-------~a~s~~eaa~~aDv 60 (286)
T COG2084 2 KIAFIG-LGIMGSPMAANLLKAG-------HEVTVYNRTPEKAAELLAAAGA------T-------VAASPAEAAAEADV 60 (286)
T ss_pred eEEEEc-CchhhHHHHHHHHHCC-------CEEEEEeCChhhhhHHHHHcCC------c-------ccCCHHHHHHhCCE
Confidence 566777 5999999999999999 8999999999996555544321 1 11334677888999
Q ss_pred EeecCCCCCCCCHHHHHHHHH----------hCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEE
Q 012947 92 LLNCVGPYRLHGDPVAAACVH----------SGCDYLDISGEPEFMERMEARYHEKAVETGSLLV 146 (452)
Q Consensus 92 VIn~aGp~~~~~~~vv~ac~~----------~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv 146 (452)
||.|+.. ...++.... .|..+||.|.-.+-.-+ +..+.+++.|...+
T Consensus 61 Vitmv~~-----~~~V~~V~~g~~g~~~~~~~G~i~IDmSTisp~~a~---~~a~~~~~~G~~~l 117 (286)
T COG2084 61 VITMLPD-----DAAVRAVLFGENGLLEGLKPGAIVIDMSTISPETAR---ELAAALAAKGLEFL 117 (286)
T ss_pred EEEecCC-----HHHHHHHHhCccchhhcCCCCCEEEECCCCCHHHHH---HHHHHHHhcCCcEE
Confidence 9999842 233333332 36668888765443322 23455566666555
|
|
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.0075 Score=57.81 Aligned_cols=68 Identities=13% Similarity=0.160 Sum_probs=48.2
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc----
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~---- 87 (452)
+.+=-.+||++|+++|++|+++| ++|++.+|.. .+ . .. ....+|+.+.++++++++
T Consensus 17 R~itN~SSGgIG~AIA~~la~~G-------a~Vvlv~~~~-~l-------~---~~--~~~~~Dv~d~~s~~~l~~~v~~ 76 (227)
T TIGR02114 17 RSITNHSTGHLGKIITETFLSAG-------HEVTLVTTKR-AL-------K---PE--PHPNLSIREIETTKDLLITLKE 76 (227)
T ss_pred eeecCCcccHHHHHHHHHHHHCC-------CEEEEEcChh-hc-------c---cc--cCCcceeecHHHHHHHHHHHHH
Confidence 34444568999999999999999 8999887631 11 0 00 113478888877776643
Q ss_pred ---CccEEeecCCCC
Q 012947 88 ---QTKLLLNCVGPY 99 (452)
Q Consensus 88 ---~~dvVIn~aGp~ 99 (452)
+.|++|||||..
T Consensus 77 ~~g~iDiLVnnAgv~ 91 (227)
T TIGR02114 77 LVQEHDILIHSMAVS 91 (227)
T ss_pred HcCCCCEEEECCEec
Confidence 579999999964
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >PTZ00082 L-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.11 Score=52.57 Aligned_cols=131 Identities=9% Similarity=0.037 Sum_probs=75.9
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC--C-CCCCccEEEEeCCCHHHHHH
Q 012947 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--S-HSLSIPILTADTTDPPSLHR 84 (452)
Q Consensus 8 ~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~--~-~~~~v~~v~~Dl~d~~sl~~ 84 (452)
-+..+|.|+|| |.+|..++..++..+- .++.+.++++++++...-++.. . ......+ .. ..| . +
T Consensus 4 ~~~~KI~IIGa-G~vG~~ia~~la~~gl------~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I-~~-~~d---~-~ 70 (321)
T PTZ00082 4 IKRRKISLIGS-GNIGGVMAYLIVLKNL------GDVVLFDIVKNIPQGKALDISHSNVIAGSNSKV-IG-TNN---Y-E 70 (321)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCC------CeEEEEeCCCchhhHHHHHHHhhhhccCCCeEE-EE-CCC---H-H
Confidence 34468999996 9999999999888772 3799999998865432222210 0 0111222 21 133 2 3
Q ss_pred HHcCccEEeecCCCCCCCCH-----HHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHH
Q 012947 85 LCSQTKLLLNCVGPYRLHGD-----PVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELG 159 (452)
Q Consensus 85 ~~~~~dvVIn~aGp~~~~~~-----~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~ 159 (452)
.++++|+||+++|.....+. .-.+...+ .....+++.....+.+. .+..|+ . +-|.|+.
T Consensus 71 ~l~~aDiVI~tag~~~~~~~~~~~~~r~~~l~~----------n~~i~~~i~~~i~~~~p-~a~~iv-~----sNP~di~ 134 (321)
T PTZ00082 71 DIAGSDVVIVTAGLTKRPGKSDKEWNRDDLLPL----------NAKIMDEVAEGIKKYCP-NAFVIV-I----TNPLDVM 134 (321)
T ss_pred HhCCCCEEEECCCCCCCCCCCcCCCCHHHHHHH----------HHHHHHHHHHHHHHHCC-CeEEEE-e----cCcHHHH
Confidence 57899999999987544433 22222111 12334444444444442 223333 2 3688999
Q ss_pred HHHHhhhc
Q 012947 160 VMFNSRQW 167 (452)
Q Consensus 160 ~~~~~~~~ 167 (452)
++.+.+..
T Consensus 135 t~~~~~~s 142 (321)
T PTZ00082 135 VKLLQEHS 142 (321)
T ss_pred HHHHHHhc
Confidence 98887665
|
|
| >cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.043 Score=54.73 Aligned_cols=125 Identities=13% Similarity=0.061 Sum_probs=74.3
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCCCCCCce-EEEEEecChhHHHHHHHHhCC---CCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 13 VIILGASGFTGKYVVREALKLFNFPSSPIK-SLALAGRNPTRVKQALQWASP---SHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 13 ilV~GATG~iG~~va~~L~~~g~~~~~~~~-~v~iagR~~~kl~~l~~~l~~---~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
|.|+|| |.+|..++..|+..+ + ++.+.++++++++....++.. ...... .+.. -.| . +.+++
T Consensus 1 I~IIGa-G~vG~~ia~~la~~~-------l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~-~I~~-t~d---~-~~l~d 66 (300)
T cd01339 1 ISIIGA-GNVGATLAQLLALKE-------LGDVVLLDIVEGLPQGKALDISQAAPILGSDT-KVTG-TND---Y-EDIAG 66 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhCC-------CcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCe-EEEE-cCC---H-HHhCC
Confidence 568999 999999999998877 4 899999998766433322211 001111 2222 123 2 34789
Q ss_pred ccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhhc
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQW 167 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~~ 167 (452)
+|+||.++|.....+..-.+...+ .....+.......+.+ ..++.|+. +-|.|+.++.+.+..
T Consensus 67 ADiVIit~g~p~~~~~~r~e~~~~----------n~~i~~~i~~~i~~~~-p~~~iIv~-----sNP~di~t~~~~~~s 129 (300)
T cd01339 67 SDVVVITAGIPRKPGMSRDDLLGT----------NAKIVKEVAENIKKYA-PNAIVIVV-----TNPLDVMTYVAYKAS 129 (300)
T ss_pred CCEEEEecCCCCCcCCCHHHHHHH----------HHHHHHHHHHHHHHHC-CCeEEEEe-----cCcHHHHHHHHHHHh
Confidence 999999998655444322222222 2344555555554433 23444443 368899999888765
|
Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas |
| >cd00300 LDH_like L-lactate dehydrogenase-like enzymes | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.093 Score=52.43 Aligned_cols=127 Identities=16% Similarity=0.131 Sum_probs=77.1
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC--CCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--SHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 13 ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~--~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
|.|+|+ |++|..++-.|+..+-. .++.+.++++++++....++.. .......+.. ..| .+.++++|
T Consensus 1 i~iiGa-G~VG~~~a~~l~~~~~~-----~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~--~~~----~~~l~~aD 68 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIAKGLA-----SELVLVDVNEEKAKGDALDLSHASAFLATGTIVR--GGD----YADAADAD 68 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhcCCC-----CEEEEEeCCccHHHHHHHhHHHhccccCCCeEEE--CCC----HHHhCCCC
Confidence 468897 88999999999887621 4799999999998888777742 0111122221 123 34789999
Q ss_pred EEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhhc
Q 012947 91 LLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQW 167 (452)
Q Consensus 91 vVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~~ 167 (452)
+||.++|.....++.=.+.... ....++++.....+.+ .++..|+- +-|.|+.++.+.+.-
T Consensus 69 iVIitag~p~~~~~~R~~l~~~----------n~~i~~~~~~~i~~~~-p~~~viv~-----sNP~d~~~~~~~~~s 129 (300)
T cd00300 69 IVVITAGAPRKPGETRLDLINR----------NAPILRSVITNLKKYG-PDAIILVV-----SNPVDILTYVAQKLS 129 (300)
T ss_pred EEEEcCCCCCCCCCCHHHHHHH----------HHHHHHHHHHHHHHhC-CCeEEEEc-----cChHHHHHHHHHHHh
Confidence 9999999644333111111111 2334444444444333 23444432 368899999887763
|
Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot |
| >PRK06270 homoserine dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.42 Score=48.68 Aligned_cols=169 Identities=9% Similarity=0.046 Sum_probs=89.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCC---CCCCceE-EEEEecC----------hhHHHHHHHHhCCCCCCCccEEEEe
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNF---PSSPIKS-LALAGRN----------PTRVKQALQWASPSHSLSIPILTAD 75 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~---~~~~~~~-v~iagR~----------~~kl~~l~~~l~~~~~~~v~~v~~D 75 (452)
.++|.|+|. |.+|+.+++.|.++... ......+ +.+++|+ .+++....++.+ .+.... +
T Consensus 2 ~i~V~IiG~-G~VG~~~~~~L~~~~~~~~~~~g~~~~vvai~d~~~~~~~~~Gi~~~~~~~~~~~~~-----~~~~~~-~ 74 (341)
T PRK06270 2 EMKIALIGF-GGVGQGVAELLAEKREYLKKRYGLDLKVVAIADSSGSAIDPDGLDLELALKVKEETG-----KLADYP-E 74 (341)
T ss_pred eEEEEEECC-CHHHHHHHHHHHHhHHHHHHHcCCCEEEEEEEeCCCcccCcCCCCHHHHHHHHhccC-----CcccCc-c
Confidence 368999996 99999999998765200 0000145 4456653 233333332211 111110 0
Q ss_pred CCCHHHHHHHHc--CccEEeecCCCCCCC---CHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCC-
Q 012947 76 TTDPPSLHRLCS--QTKLLLNCVGPYRLH---GDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSAC- 149 (452)
Q Consensus 76 l~d~~sl~~~~~--~~dvVIn~aGp~~~~---~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~- 149 (452)
.....++++++. ++|+||.|.++.... ....+..|+++|.|.|-.+ ..+..... ..+.+.|+++|+.+...+
T Consensus 75 ~~~~~d~~ell~~~~~DvVvd~T~s~~~~~~~a~~~~~~aL~~GkhVVtaN-K~pla~~~-~eL~~~A~~~g~~~~~ea~ 152 (341)
T PRK06270 75 GGGEISGLEVIRSVDADVVVEATPTNIETGEPALSHCRKALERGKHVVTSN-KGPLALAY-KELKELAKKNGVRFRYEAT 152 (341)
T ss_pred ccccCCHHHHhhccCCCEEEECCcCcccccchHHHHHHHHHHCCCEEEcCC-cHHHHhhH-HHHHHHHHHcCCEEEEeee
Confidence 001123445553 689999999764432 2567899999999987543 22222222 456778888998765322
Q ss_pred CCCcchhhHHHHHHhhhcCCCCCcceEEEEEEeccCCccccccccHHHHHHhH
Q 012947 150 GFDSIPAELGVMFNSRQWIPPAVPNQIEAYVSLESDKRIVGNFGTYESAVLGV 202 (452)
Q Consensus 150 G~~s~P~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~GT~~S~~~~~ 202 (452)
-..++| .+...+++........++..++ ||..=++..|
T Consensus 153 v~~glP----ii~~l~~~l~g~~I~~I~GIln-----------GT~nyIl~~m 190 (341)
T PRK06270 153 VGGAMP----IINLAKETLAGNDIKSIKGILN-----------GTTNYILTRM 190 (341)
T ss_pred eeechh----HHHHHHhhcccCceEEEEEEEe-----------CcHHHHHHHH
Confidence 112455 3444444432233444444433 6766455555
|
|
| >COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.13 Score=51.79 Aligned_cols=117 Identities=22% Similarity=0.246 Sum_probs=78.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
+.++|.|+|++++.++..+..+.+.+.. ..-+.+++|+.++++++.++++ +. -.. .+++++++.
T Consensus 2 ~~irvgiiG~G~~~~~~~~~~~~~~~~~----~~~vav~d~~~~~a~~~a~~~~------~~---~~~---~~~~~ll~~ 65 (342)
T COG0673 2 KMIRVGIIGAGGIAGKAHLPALAALGGG----LELVAVVDRDPERAEAFAEEFG------IA---KAY---TDLEELLAD 65 (342)
T ss_pred CeeEEEEEcccHHHHHHhHHHHHhCCCc----eEEEEEecCCHHHHHHHHHHcC------CC---ccc---CCHHHHhcC
Confidence 4589999999888888888888876510 1357888999999999998874 12 122 346677764
Q ss_pred --ccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHH--HHHHHHHHHHHHhCccEEE
Q 012947 89 --TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFM--ERMEARYHEKAVETGSLLV 146 (452)
Q Consensus 89 --~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~--~~~~~~~~~~A~~~gv~iv 146 (452)
+|+|+-+.-+ ..+ ..++.+|+++|.|.+= |-++. -+-.+.+-+.|+++|+.+.
T Consensus 66 ~~iD~V~Iatp~-~~H-~e~~~~AL~aGkhVl~---EKPla~t~~ea~~l~~~a~~~~~~l~ 122 (342)
T COG0673 66 PDIDAVYIATPN-ALH-AELALAALEAGKHVLC---EKPLALTLEEAEELVELARKAGVKLM 122 (342)
T ss_pred CCCCEEEEcCCC-hhh-HHHHHHHHhcCCEEEE---cCCCCCCHHHHHHHHHHHHHcCCcee
Confidence 7899888744 334 5788999999998431 22211 1112345567788877654
|
|
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.02 Score=59.24 Aligned_cols=74 Identities=12% Similarity=0.103 Sum_probs=55.3
Q ss_pred CCCeEEEEcC----------------CchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEE
Q 012947 9 ELFDVIILGA----------------SGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPIL 72 (452)
Q Consensus 9 ~~~~ilV~GA----------------TG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v 72 (452)
+..+++|+|| ||.+|..++++|..+| ++|.+..++.... . +. .+.
T Consensus 184 ~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~G-------a~V~~~~g~~~~~------~----~~--~~~ 244 (390)
T TIGR00521 184 EGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRG-------ADVTLITGPVSLL------T----PP--GVK 244 (390)
T ss_pred CCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCC-------CEEEEeCCCCccC------C----CC--CcE
Confidence 3467999998 3569999999999999 8988877655321 1 11 335
Q ss_pred EEeCCCHHHH-HHHH----cCccEEeecCCCCCC
Q 012947 73 TADTTDPPSL-HRLC----SQTKLLLNCVGPYRL 101 (452)
Q Consensus 73 ~~Dl~d~~sl-~~~~----~~~dvVIn~aGp~~~ 101 (452)
..|+++.+++ ++++ .+.|++|||||+...
T Consensus 245 ~~~v~~~~~~~~~~~~~~~~~~D~~i~~Aavsd~ 278 (390)
T TIGR00521 245 SIKVSTAEEMLEAALNELAKDFDIFISAAAVADF 278 (390)
T ss_pred EEEeccHHHHHHHHHHhhcccCCEEEEccccccc
Confidence 6899998888 5454 368999999998654
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >PRK14852 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.038 Score=62.81 Aligned_cols=105 Identities=13% Similarity=0.112 Sum_probs=69.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC-------------------hhHHHHHHHHhCC-CCCCC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASP-SHSLS 68 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~-------------------~~kl~~l~~~l~~-~~~~~ 68 (452)
+..+|+|.|+ |++|..+++.|+..|- -++.+++-+ ..|.+.+.+.+.. ....+
T Consensus 331 ~~srVlVvGl-GGlGs~ia~~LAraGV------G~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~ 403 (989)
T PRK14852 331 LRSRVAIAGL-GGVGGIHLMTLARTGI------GNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLD 403 (989)
T ss_pred hcCcEEEECC-cHHHHHHHHHHHHcCC------CeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCe
Confidence 3567999997 7789999999999984 355555432 1243333333321 11234
Q ss_pred ccEEEEeCCCHHHHHHHHcCccEEeecCCCCCC-CCHHHHHHHHHhCCcEEEec
Q 012947 69 IPILTADTTDPPSLHRLCSQTKLLLNCVGPYRL-HGDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 69 v~~v~~Dl~d~~sl~~~~~~~dvVIn~aGp~~~-~~~~vv~ac~~~g~~yvDls 121 (452)
+.++...+ +++.++++++++|+||+|.--+.. ....+.+.|.+.++.+|...
T Consensus 404 I~~~~~~I-~~en~~~fl~~~DiVVDa~D~~~~~~rr~l~~~c~~~~IP~I~ag 456 (989)
T PRK14852 404 IRSFPEGV-AAETIDAFLKDVDLLVDGIDFFALDIRRRLFNRALELGIPVITAG 456 (989)
T ss_pred EEEEecCC-CHHHHHHHhhCCCEEEECCCCccHHHHHHHHHHHHHcCCCEEEee
Confidence 44444455 557899999999999999854322 12467889999999888654
|
|
| >TIGR02130 dapB_plant dihydrodipicolinate reductase | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.059 Score=52.95 Aligned_cols=107 Identities=12% Similarity=0.145 Sum_probs=63.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEE--ecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA--GRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~ia--gR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
++|+|.||+|-+|+.+++.+.+.+ ++++.+ ++.. ..+.+.+ +. ...++++. .-+...++..+++.
T Consensus 1 ~~V~V~Ga~GkMG~~v~~av~~~~-------~~Lv~~~~~~~~-~~~~~~~-~~---g~~v~v~~-~~~~~~~l~~~~~~ 67 (275)
T TIGR02130 1 IQIMVNGCPGKMGKAVAEAADAAG-------LEIVPTSFGGEE-EAENEAE-VA---GKEILLHG-PSEREARIGEVFAK 67 (275)
T ss_pred CeEEEeCCCChHHHHHHHHHhcCC-------CEEEeeEccccc-cccchhh-hc---ccceeeec-cccccccHHHHHhh
Confidence 479999999999999999987743 666653 2211 1111111 11 11233321 11223556676666
Q ss_pred -cc-EEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHH
Q 012947 89 -TK-LLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARY 134 (452)
Q Consensus 89 -~d-vVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~ 134 (452)
+| |+|...-|-.. ...++.|.++++++|--| ..|..+-+..+
T Consensus 68 ~~d~VvIDFT~P~~~--~~n~~~~~~~gv~~ViGT--TG~~~~~~~~l 111 (275)
T TIGR02130 68 YPELICIDYTHPSAV--NDNAAFYGKHGIPFVMGT--TGGDREALAKL 111 (275)
T ss_pred cCCEEEEECCChHHH--HHHHHHHHHCCCCEEEcC--CCCCHHHHHHH
Confidence 88 99998766443 457899999999876433 33444433444
|
This narrow family includes genes from Arabidopsis and Fibrobacter succinogenes (which probably recieved the gene from a plant via lateral gene transfer). The sequences are distantly related to the dihydrodipicolinate reductases from archaea. In Fibrobacter this gene is the only candidate DHPR in the genome. |
| >PRK08291 ectoine utilization protein EutC; Validated | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.021 Score=57.85 Aligned_cols=97 Identities=14% Similarity=0.283 Sum_probs=65.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+++|+|+ |..|+..+..+....+ ..++.+.+|+.++++++.+++.. ...+.+... +++++++.++
T Consensus 132 ~~~v~IiGa-G~~a~~~~~al~~~~~-----~~~V~v~~R~~~~a~~l~~~~~~--~~g~~v~~~-----~d~~~al~~a 198 (330)
T PRK08291 132 ASRAAVIGA-GEQARLQLEALTLVRP-----IREVRVWARDAAKAEAYAADLRA--ELGIPVTVA-----RDVHEAVAGA 198 (330)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCC-----CCEEEEEcCCHHHHHHHHHHHhh--ccCceEEEe-----CCHHHHHccC
Confidence 357999998 7779999998886431 15899999999999999887742 112332222 2367778899
Q ss_pred cEEeecCCCCCCCCHHHHHH-HHHhCCcEEEecCc
Q 012947 90 KLLLNCVGPYRLHGDPVAAA-CVHSGCDYLDISGE 123 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~a-c~~~g~~yvDlsge 123 (452)
|+||++... .+++++. .++.|+|...+...
T Consensus 199 DiVi~aT~s----~~p~i~~~~l~~g~~v~~vg~d 229 (330)
T PRK08291 199 DIIVTTTPS----EEPILKAEWLHPGLHVTAMGSD 229 (330)
T ss_pred CEEEEeeCC----CCcEecHHHcCCCceEEeeCCC
Confidence 999998743 2355544 35666665554433
|
|
| >cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.05 Score=54.09 Aligned_cols=23 Identities=35% Similarity=0.397 Sum_probs=20.4
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCC
Q 012947 12 DVIILGASGFTGKYVVREALKLFN 35 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~ 35 (452)
+|+|+|+ |.+|..++++|+..|.
T Consensus 1 kVLIvGa-GGLGs~vA~~La~aGV 23 (307)
T cd01486 1 KCLLLGA-GTLGCNVARNLLGWGV 23 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCC
Confidence 5899998 7789999999999884
|
This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole. |
| >PRK10669 putative cation:proton antiport protein; Provisional | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.11 Score=56.57 Aligned_cols=130 Identities=12% Similarity=0.045 Sum_probs=83.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-HcCc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~-~~~~ 89 (452)
-+++|.|. |-+|+.+++.|.+++ .++.+.++|+++.+++.+ .+...+.+|.+|++.++++ ++++
T Consensus 418 ~hiiI~G~-G~~G~~la~~L~~~g-------~~vvvId~d~~~~~~~~~-------~g~~~i~GD~~~~~~L~~a~i~~a 482 (558)
T PRK10669 418 NHALLVGY-GRVGSLLGEKLLAAG-------IPLVVIETSRTRVDELRE-------RGIRAVLGNAANEEIMQLAHLDCA 482 (558)
T ss_pred CCEEEECC-ChHHHHHHHHHHHCC-------CCEEEEECCHHHHHHHHH-------CCCeEEEcCCCCHHHHHhcCcccc
Confidence 45888887 788999999999988 789999999999877754 2578999999999999865 5789
Q ss_pred cEEeecCCCCCCCCHHHHHHHHHhC-CcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhhcC
Q 012947 90 KLLLNCVGPYRLHGDPVAAACVHSG-CDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWI 168 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~~~g-~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~~~ 168 (452)
|.|+-+.+- ......++..+.+.. ..++=...+.+ + ..+.-++.|+..+- .|....+..+.+.+.
T Consensus 483 ~~viv~~~~-~~~~~~iv~~~~~~~~~~~iiar~~~~--~-----~~~~l~~~Gad~vv------~p~~~~a~~i~~~l~ 548 (558)
T PRK10669 483 RWLLLTIPN-GYEAGEIVASAREKRPDIEIIARAHYD--D-----EVAYITERGANQVV------MGEREIARTMLELLE 548 (558)
T ss_pred CEEEEEcCC-hHHHHHHHHHHHHHCCCCeEEEEECCH--H-----HHHHHHHcCCCEEE------ChHHHHHHHHHHHhc
Confidence 988766531 111123444444432 22222222211 1 11122345554332 466777777777775
Q ss_pred C
Q 012947 169 P 169 (452)
Q Consensus 169 ~ 169 (452)
.
T Consensus 549 ~ 549 (558)
T PRK10669 549 T 549 (558)
T ss_pred C
Confidence 4
|
|
| >COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.042 Score=55.01 Aligned_cols=128 Identities=16% Similarity=0.101 Sum_probs=79.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC-CCCCCc-cEEEEeCCCHHHHHHHHcC
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSI-PILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~-~~~~~v-~~v~~Dl~d~~sl~~~~~~ 88 (452)
++|.|+|| |.+|+.++-.|+.++. ..++.+.++++++++-...++.. ...... ..+.+| .| -+.+++
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~-----~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~----y~~~~~ 69 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGL-----GSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GD----YEDLKG 69 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccc-----cceEEEEEcccccccchhcchhhcchhccCceEEecC-CC----hhhhcC
Confidence 47999999 9999999999977663 13899999998877766666632 000111 122222 22 556889
Q ss_pred ccEEeecCCCCCCCCH---HHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhh
Q 012947 89 TKLLLNCVGPYRLHGD---PVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSR 165 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~---~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~ 165 (452)
+|+||-+||.-...|+ -+++.-. ..++.+.....+.+. .++.+|- +-|-|+.+|.+.+
T Consensus 70 aDiVvitAG~prKpGmtR~DLl~~Na-------------~I~~~i~~~i~~~~~-d~ivlVv-----tNPvD~~ty~~~k 130 (313)
T COG0039 70 ADIVVITAGVPRKPGMTRLDLLEKNA-------------KIVKDIAKAIAKYAP-DAIVLVV-----TNPVDILTYIAMK 130 (313)
T ss_pred CCEEEEeCCCCCCCCCCHHHHHHhhH-------------HHHHHHHHHHHhhCC-CeEEEEe-----cCcHHHHHHHHHH
Confidence 9999999997776662 2222221 223333333333332 3444442 4688999999988
Q ss_pred hcC
Q 012947 166 QWI 168 (452)
Q Consensus 166 ~~~ 168 (452)
...
T Consensus 131 ~sg 133 (313)
T COG0039 131 FSG 133 (313)
T ss_pred hcC
Confidence 885
|
|
| >PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.043 Score=54.74 Aligned_cols=113 Identities=15% Similarity=0.042 Sum_probs=69.1
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCccE
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKL 91 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~dv 91 (452)
+|.|+|. |-+|+.+++.|++.+ ++|.+.+|++++.+++.+ .+ +. . ..+.+++.+-++++|+
T Consensus 2 ~Ig~IGl-G~mG~~mA~~L~~~g-------~~v~v~dr~~~~~~~~~~-~g------~~--~--~~s~~~~~~~~~~adv 62 (299)
T PRK12490 2 KLGLIGL-GKMGGNMAERLREDG-------HEVVGYDVNQEAVDVAGK-LG------IT--A--RHSLEELVSKLEAPRT 62 (299)
T ss_pred EEEEEcc-cHHHHHHHHHHHhCC-------CEEEEEECCHHHHHHHHH-CC------Ce--e--cCCHHHHHHhCCCCCE
Confidence 6888885 999999999999988 789999999998877643 21 11 1 2233333333334689
Q ss_pred EeecCCCCCCCCHHHHHHHH---HhCCcEEEecCc-HHHHHHHHHHHHHHHHhCccEEEcC
Q 012947 92 LLNCVGPYRLHGDPVAAACV---HSGCDYLDISGE-PEFMERMEARYHEKAVETGSLLVSA 148 (452)
Q Consensus 92 VIn~aGp~~~~~~~vv~ac~---~~g~~yvDlsge-~~~~~~~~~~~~~~A~~~gv~iv~~ 148 (452)
||.|+.+... -..+++... ..+..+||++.. +...+++ .+..++.|+..+-+
T Consensus 63 Vi~~vp~~~~-~~~v~~~i~~~l~~g~ivid~st~~~~~~~~~----~~~~~~~g~~~vda 118 (299)
T PRK12490 63 IWVMVPAGEV-TESVIKDLYPLLSPGDIVVDGGNSRYKDDLRR----AEELAERGIHYVDC 118 (299)
T ss_pred EEEEecCchH-HHHHHHHHhccCCCCCEEEECCCCCchhHHHH----HHHHHHcCCeEEeC
Confidence 9888743211 123333322 245568998654 4444444 33444567766643
|
|
| >TIGR02992 ectoine_eutC ectoine utilization protein EutC | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.02 Score=57.99 Aligned_cols=100 Identities=15% Similarity=0.215 Sum_probs=67.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+++|+|+ |..++..++.|+...+ .-++.+.+|+.++.+++.+++.. ...+.+.. . +++++++.++
T Consensus 129 ~~~v~iiGa-G~qA~~~~~al~~~~~-----i~~v~V~~R~~~~a~~~a~~~~~--~~g~~v~~--~---~~~~~av~~a 195 (326)
T TIGR02992 129 SSVVAIFGA-GMQARLQLEALTLVRD-----IRSARIWARDSAKAEALALQLSS--LLGIDVTA--A---TDPRAAMSGA 195 (326)
T ss_pred CcEEEEECC-CHHHHHHHHHHHHhCC-----ccEEEEECCCHHHHHHHHHHHHh--hcCceEEE--e---CCHHHHhccC
Confidence 357999997 8899999999975331 14799999999999999887742 11233322 2 3467778899
Q ss_pred cEEeecCCCCCCCCHHHHH-HHHHhCCcEEEecCcHHH
Q 012947 90 KLLLNCVGPYRLHGDPVAA-ACVHSGCDYLDISGEPEF 126 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~-ac~~~g~~yvDlsge~~~ 126 (452)
|+||+|.... ++++. ..++.|+|...+....+.
T Consensus 196 DiVvtaT~s~----~p~i~~~~l~~g~~i~~vg~~~p~ 229 (326)
T TIGR02992 196 DIIVTTTPSE----TPILHAEWLEPGQHVTAMGSDAEH 229 (326)
T ss_pred CEEEEecCCC----CcEecHHHcCCCcEEEeeCCCCCC
Confidence 9999997432 34443 355667766655443333
|
Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423). |
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.069 Score=46.85 Aligned_cols=97 Identities=16% Similarity=0.159 Sum_probs=72.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
+..+++++|. | .|..+++.|.+.| ++|..++.+++..+...+. .+.++..|+.++. -+.-++
T Consensus 16 ~~~kileIG~-G-fG~~vA~~L~~~G-------~~ViaIDi~~~aV~~a~~~-------~~~~v~dDlf~p~--~~~y~~ 77 (134)
T PRK04148 16 KNKKIVELGI-G-FYFKVAKKLKESG-------FDVIVIDINEKAVEKAKKL-------GLNAFVDDLFNPN--LEIYKN 77 (134)
T ss_pred cCCEEEEEEe-c-CCHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHh-------CCeEEECcCCCCC--HHHHhc
Confidence 3468999997 4 7899999999988 8999999999987766542 4689999998765 355678
Q ss_pred ccEEeecCCCCCCCCHHHHHHHHHhCCc--EEEecCcH
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACVHSGCD--YLDISGEP 124 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~~~g~~--yvDlsge~ 124 (452)
+|+|..+--|-... .++++.+.+-+++ ..-++||.
T Consensus 78 a~liysirpp~el~-~~~~~la~~~~~~~~i~~l~~e~ 114 (134)
T PRK04148 78 AKLIYSIRPPRDLQ-PFILELAKKINVPLIIKPLSGEE 114 (134)
T ss_pred CCEEEEeCCCHHHH-HHHHHHHHHcCCCEEEEcCCCCC
Confidence 99998876544333 5777888777776 33455654
|
|
| >PLN02350 phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.23 Score=53.02 Aligned_cols=119 Identities=18% Similarity=0.186 Sum_probs=67.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
.+|-++| .|-.|+.+++.|+++| ++|.+.+|+.++.+++.+.... .....+.. ..+++++.+.++++|
T Consensus 7 ~~IG~IG-LG~MG~~mA~nL~~~G-------~~V~V~NRt~~k~~~l~~~~~~--~Ga~~~~~--a~s~~e~v~~l~~~d 74 (493)
T PLN02350 7 SRIGLAG-LAVMGQNLALNIAEKG-------FPISVYNRTTSKVDETVERAKK--EGNLPLYG--FKDPEDFVLSIQKPR 74 (493)
T ss_pred CCEEEEe-eHHHHHHHHHHHHhCC-------CeEEEECCCHHHHHHHHHhhhh--cCCccccc--CCCHHHHHhcCCCCC
Confidence 4688888 4999999999999998 8999999999999888763210 00001111 224444444444577
Q ss_pred EEeecCCCCCCCCHHHHHH---HHHhCCcEEEecCc-HHHHHHHHHHHHHHHHhCccEEE
Q 012947 91 LLLNCVGPYRLHGDPVAAA---CVHSGCDYLDISGE-PEFMERMEARYHEKAVETGSLLV 146 (452)
Q Consensus 91 vVIn~aGp~~~~~~~vv~a---c~~~g~~yvDlsge-~~~~~~~~~~~~~~A~~~gv~iv 146 (452)
+||.|+.-.. .-+.+++- ..+.|.-+||.+.. +.-.+++ .+..+++|+..+
T Consensus 75 vIi~~v~~~~-aV~~Vi~gl~~~l~~G~iiID~sT~~~~~t~~~----~~~l~~~Gi~fl 129 (493)
T PLN02350 75 SVIILVKAGA-PVDQTIKALSEYMEPGDCIIDGGNEWYENTERR----IKEAAEKGLLYL 129 (493)
T ss_pred EEEEECCCcH-HHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHH----HHHHHHcCCeEE
Confidence 7777762111 11222211 12235557777654 2333333 333444555544
|
|
| >COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.06 Score=54.43 Aligned_cols=72 Identities=15% Similarity=0.162 Sum_probs=54.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
.-+|+|+|+. ++|...++++...+ .+|++.+|+++|++. ..++++ +.+ .|.+|++.++++-+.+
T Consensus 167 G~~V~I~G~G-GlGh~avQ~Aka~g-------a~Via~~~~~~K~e~-a~~lGA------d~~-i~~~~~~~~~~~~~~~ 230 (339)
T COG1064 167 GKWVAVVGAG-GLGHMAVQYAKAMG-------AEVIAITRSEEKLEL-AKKLGA------DHV-INSSDSDALEAVKEIA 230 (339)
T ss_pred CCEEEEECCc-HHHHHHHHHHHHcC-------CeEEEEeCChHHHHH-HHHhCC------cEE-EEcCCchhhHHhHhhC
Confidence 3579999996 89999999998888 899999999999854 455542 222 2333666666666669
Q ss_pred cEEeecCC
Q 012947 90 KLLLNCVG 97 (452)
Q Consensus 90 dvVIn~aG 97 (452)
|++|++++
T Consensus 231 d~ii~tv~ 238 (339)
T COG1064 231 DAIIDTVG 238 (339)
T ss_pred cEEEECCC
Confidence 99999997
|
|
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.058 Score=50.70 Aligned_cols=79 Identities=15% Similarity=0.144 Sum_probs=48.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC---hhHHH---------------HHHHHhCC-CCCCCcc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN---PTRVK---------------QALQWASP-SHSLSIP 70 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~---~~kl~---------------~l~~~l~~-~~~~~v~ 70 (452)
..+|+|.|+ |.+|..++++|++.|. -+|.+.+++ .+.+. .+.+.+.. ....++.
T Consensus 21 ~~~V~IvG~-GglGs~ia~~La~~Gv------g~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~ 93 (200)
T TIGR02354 21 QATVAICGL-GGLGSNVAINLARAGI------GKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIE 93 (200)
T ss_pred CCcEEEECc-CHHHHHHHHHHHHcCC------CEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEE
Confidence 467999999 7799999999999983 368888877 32221 11222211 0112333
Q ss_pred EEEEeCCCHHHHHHHHcCccEEeecC
Q 012947 71 ILTADTTDPPSLHRLCSQTKLLLNCV 96 (452)
Q Consensus 71 ~v~~Dl~d~~sl~~~~~~~dvVIn~a 96 (452)
.+..+++ .+.+.++++++|+||.|.
T Consensus 94 ~~~~~i~-~~~~~~~~~~~DlVi~a~ 118 (200)
T TIGR02354 94 AYDEKIT-EENIDKFFKDADIVCEAF 118 (200)
T ss_pred EeeeeCC-HhHHHHHhcCCCEEEECC
Confidence 3344453 355666777777777764
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.037 Score=60.89 Aligned_cols=73 Identities=21% Similarity=0.299 Sum_probs=61.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-HcC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQ 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~-~~~ 88 (452)
+.+++|.|. |-+|+.+++.|.+++ .++++.+.|+++.+.+.+ .+.+++.+|.+|++.++++ +++
T Consensus 400 ~~~vII~G~-Gr~G~~va~~L~~~g-------~~vvvID~d~~~v~~~~~-------~g~~v~~GDat~~~~L~~agi~~ 464 (621)
T PRK03562 400 QPRVIIAGF-GRFGQIVGRLLLSSG-------VKMTVLDHDPDHIETLRK-------FGMKVFYGDATRMDLLESAGAAK 464 (621)
T ss_pred cCcEEEEec-ChHHHHHHHHHHhCC-------CCEEEEECCHHHHHHHHh-------cCCeEEEEeCCCHHHHHhcCCCc
Confidence 356889887 788999999999988 789999999999887754 2468999999999998864 678
Q ss_pred ccEEeecCC
Q 012947 89 TKLLLNCVG 97 (452)
Q Consensus 89 ~dvVIn~aG 97 (452)
+|+||-+..
T Consensus 465 A~~vvv~~~ 473 (621)
T PRK03562 465 AEVLINAID 473 (621)
T ss_pred CCEEEEEeC
Confidence 999998873
|
|
| >PRK06141 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.04 Score=55.43 Aligned_cols=102 Identities=15% Similarity=0.225 Sum_probs=67.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+++|+|+ |..|+.+++.+....+ ..+|.+.+|++++.+++.+++.. ..+.+..+ ++++++++++
T Consensus 125 ~~~v~iiG~-G~~a~~~~~al~~~~~-----~~~V~V~~Rs~~~a~~~a~~~~~---~g~~~~~~-----~~~~~av~~a 190 (314)
T PRK06141 125 ASRLLVVGT-GRLASLLALAHASVRP-----IKQVRVWGRDPAKAEALAAELRA---QGFDAEVV-----TDLEAAVRQA 190 (314)
T ss_pred CceEEEECC-cHHHHHHHHHHHhcCC-----CCEEEEEcCCHHHHHHHHHHHHh---cCCceEEe-----CCHHHHHhcC
Confidence 467999995 9999999997776331 16899999999999999888742 12222222 3456778899
Q ss_pred cEEeecCCCCCCCCHHHHH-HHHHhCCcEEEecCc-HHHHHHH
Q 012947 90 KLLLNCVGPYRLHGDPVAA-ACVHSGCDYLDISGE-PEFMERM 130 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~-ac~~~g~~yvDlsge-~~~~~~~ 130 (452)
|+||++.... +++++ ..++.|+ +||..|. .+..+++
T Consensus 191 DIVi~aT~s~----~pvl~~~~l~~g~-~i~~ig~~~~~~~El 228 (314)
T PRK06141 191 DIISCATLST----EPLVRGEWLKPGT-HLDLVGNFTPDMREC 228 (314)
T ss_pred CEEEEeeCCC----CCEecHHHcCCCC-EEEeeCCCCcccccC
Confidence 9998876422 34442 3456677 4555443 4444444
|
|
| >COG0743 Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.34 Score=49.07 Aligned_cols=124 Identities=18% Similarity=0.222 Sum_probs=77.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEE--EEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHH-------
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLA--LAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPS------- 81 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~--iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~s------- 81 (452)
.+++|+|+||-||....+-+.+++. .+++. .++||.+++.+..++++. +. ++..|-.+...
T Consensus 2 k~i~iLGSTGSIG~qtLdVi~~~p~-----~f~vval~ag~n~~~l~~q~~~f~P----~~-v~~~d~~~~~~l~~~~~~ 71 (385)
T COG0743 2 KKLTILGSTGSIGTQTLDVIRRNPD-----KFEVVALAAGKNVELLAEQIREFKP----KY-VVIADESAAKELEDLLPG 71 (385)
T ss_pred ceEEEEecCCchhHHHHHHHHhCCC-----cEEEEEEecCCcHHHHHHHHHHhCC----ce-EEecChHHHHHHHhhccC
Confidence 4799999999999999999888763 15554 367899998888888752 11 22233333333
Q ss_pred ---------HHHHHc--CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcC
Q 012947 82 ---------LHRLCS--QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSA 148 (452)
Q Consensus 82 ---------l~~~~~--~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~ 148 (452)
+.+++. ++|+|+|..- ...|.+-.-++++.|.+..=.+=|...+.- ..+.+.++++|+.|++-
T Consensus 72 ~~v~~G~~~l~e~a~~~~~d~Vm~Aiv--G~aGL~pTlaAi~aGK~iaLANKEsLV~aG--~l~~~~~k~~g~~llPV 145 (385)
T COG0743 72 TEVLVGEEGLCELAAEDDADVVMNAIV--GAAGLLPTLAAIKAGKTIALANKESLVTAG--ELVMDAAKESGAQLLPV 145 (385)
T ss_pred ceEEecHHHHHHHHhcCCCCEEeehhh--hhcccHHHHHHHHcCCceeecchhhhhccc--HHHHHHHHHcCCEEecc
Confidence 333333 4688888642 123444445666777665444434333322 23456788899998754
|
|
| >PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.028 Score=57.61 Aligned_cols=98 Identities=13% Similarity=0.146 Sum_probs=60.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
++|-|.||||++|+.+.+.|+.+..- +..++.....+.+ .... -.+ .+-.....++.|++. ++++|
T Consensus 2 ~~VAIVGATG~vG~ell~llL~~~~f---~~~~l~~~ss~~s-g~~~-~~f-----~g~~~~v~~~~~~~~----~~~~D 67 (369)
T PRK06598 2 KKVGFVGWRGMVGSVLMQRMVEENDF---DLIEPVFFSTSQA-GGAA-PSF-----GGKEGTLQDAFDIDA----LKKLD 67 (369)
T ss_pred eEEEEEeCCCHHHHHHHHHHHhCCCC---CcCcEEEecchhh-CCcc-ccc-----CCCcceEEecCChhH----hcCCC
Confidence 57899999999999999977776531 0012555443211 1111 111 111234445555444 36799
Q ss_pred EEeecCCCCCCCCHHHHHHHHHhCCc--EEEecCcH
Q 012947 91 LLLNCVGPYRLHGDPVAAACVHSGCD--YLDISGEP 124 (452)
Q Consensus 91 vVIn~aGp~~~~~~~vv~ac~~~g~~--yvDlsge~ 124 (452)
+|+.++|.- ....++..+.+.|+. .||.++..
T Consensus 68 ivf~a~~~~--~s~~~~~~~~~aG~~~~VID~Ss~f 101 (369)
T PRK06598 68 IIITCQGGD--YTNEVYPKLRAAGWQGYWIDAASTL 101 (369)
T ss_pred EEEECCCHH--HHHHHHHHHHhCCCCeEEEECChHH
Confidence 999998643 346777778888954 99999754
|
|
| >TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.055 Score=54.38 Aligned_cols=82 Identities=16% Similarity=0.062 Sum_probs=52.8
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCccE
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKL 91 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~dv 91 (452)
+|.|+||+|.+|..++-.|+..+- .-++++.++++ .+....++.. ......+.... +.+++.+.++++|+
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~-----~~elvL~Di~~--a~g~a~DL~~-~~~~~~i~~~~--~~~~~~~~~~daDi 70 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPY-----VSELSLYDIAG--AAGVAADLSH-IPTAASVKGFS--GEEGLENALKGADV 70 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCC-----CcEEEEecCCC--CcEEEchhhc-CCcCceEEEec--CCCchHHHcCCCCE
Confidence 589999999999999999988762 14799999977 2222223321 01112222111 11235678999999
Q ss_pred EeecCCCCCCCC
Q 012947 92 LLNCVGPYRLHG 103 (452)
Q Consensus 92 VIn~aGp~~~~~ 103 (452)
||.++|.....+
T Consensus 71 vvitaG~~~~~g 82 (312)
T TIGR01772 71 VVIPAGVPRKPG 82 (312)
T ss_pred EEEeCCCCCCCC
Confidence 999999755444
|
Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases. |
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.065 Score=53.89 Aligned_cols=74 Identities=16% Similarity=0.063 Sum_probs=51.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCH----HHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDP----PSLHRL 85 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~----~sl~~~ 85 (452)
.-.++|+||+|.+|..+++.+...| .++++..++.++.+.+.+.++. .. ..|..+. +.+.+.
T Consensus 152 g~~VlI~Ga~G~vG~~aiqlAk~~G-------~~Vi~~~~~~~~~~~~~~~lGa------~~-vi~~~~~~~~~~~i~~~ 217 (338)
T cd08295 152 GETVFVSAASGAVGQLVGQLAKLKG-------CYVVGSAGSDEKVDLLKNKLGF------DD-AFNYKEEPDLDAALKRY 217 (338)
T ss_pred CCEEEEecCccHHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHhcCC------ce-eEEcCCcccHHHHHHHh
Confidence 3579999999999999999888777 7888889999988766654642 11 2233222 222222
Q ss_pred H-cCccEEeecCC
Q 012947 86 C-SQTKLLLNCVG 97 (452)
Q Consensus 86 ~-~~~dvVIn~aG 97 (452)
. .++|+|++++|
T Consensus 218 ~~~gvd~v~d~~g 230 (338)
T cd08295 218 FPNGIDIYFDNVG 230 (338)
T ss_pred CCCCcEEEEECCC
Confidence 2 25799999887
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.027 Score=50.60 Aligned_cols=75 Identities=13% Similarity=0.182 Sum_probs=51.2
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCC-CCCCccEEE-EeCCCHHHHHHHHcCc
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILT-ADTTDPPSLHRLCSQT 89 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~-~~~~v~~v~-~Dl~d~~sl~~~~~~~ 89 (452)
+|.|+|| |-.|.+++..|+.++ .+|.+.+|+++.++.+.+.-... ..+.+.+-. ..+ ..+++++++++
T Consensus 1 KI~ViGa-G~~G~AlA~~la~~g-------~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~--t~dl~~a~~~a 70 (157)
T PF01210_consen 1 KIAVIGA-GNWGTALAALLADNG-------HEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKA--TTDLEEALEDA 70 (157)
T ss_dssp EEEEESS-SHHHHHHHHHHHHCT-------EEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEE--ESSHHHHHTT-
T ss_pred CEEEECc-CHHHHHHHHHHHHcC-------CEEEEEeccHHHHHHHHHhCCCCCCCCCcccCccccc--ccCHHHHhCcc
Confidence 5899998 778999999999998 89999999999888777643210 011111110 011 13467888999
Q ss_pred cEEeecC
Q 012947 90 KLLLNCV 96 (452)
Q Consensus 90 dvVIn~a 96 (452)
|+||-++
T Consensus 71 d~Iiiav 77 (157)
T PF01210_consen 71 DIIIIAV 77 (157)
T ss_dssp SEEEE-S
T ss_pred cEEEecc
Confidence 9999887
|
This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A .... |
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.035 Score=50.70 Aligned_cols=55 Identities=18% Similarity=0.270 Sum_probs=43.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
+..+|+|+|+++.+|..++++|.+++ .++.++.|+. +++.+.+.+
T Consensus 43 ~gk~vlViG~G~~~G~~~a~~L~~~g-------~~V~v~~r~~----------------------------~~l~~~l~~ 87 (168)
T cd01080 43 AGKKVVVVGRSNIVGKPLAALLLNRN-------ATVTVCHSKT----------------------------KNLKEHTKQ 87 (168)
T ss_pred CCCEEEEECCcHHHHHHHHHHHhhCC-------CEEEEEECCc----------------------------hhHHHHHhh
Confidence 45789999997778999999999988 6888888863 234566777
Q ss_pred ccEEeecCCC
Q 012947 89 TKLLLNCVGP 98 (452)
Q Consensus 89 ~dvVIn~aGp 98 (452)
+|+||++.|-
T Consensus 88 aDiVIsat~~ 97 (168)
T cd01080 88 ADIVIVAVGK 97 (168)
T ss_pred CCEEEEcCCC
Confidence 8888888763
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >PRK08300 acetaldehyde dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.076 Score=52.97 Aligned_cols=97 Identities=15% Similarity=0.182 Sum_probs=65.2
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEE-EEEecChhHH-HHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRV-KQALQWASPSHSLSIPILTADTTDPPSLHRL- 85 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v-~iagR~~~kl-~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~- 85 (452)
+++++-|+| +|.+|+..+..+.+... .++ ++++++.++. .+..++++ +... .++.+.+-+.
T Consensus 3 ~klrVAIIG-tG~IGt~hm~~l~~~~~------velvAVvdid~es~gla~A~~~G------i~~~---~~~ie~LL~~~ 66 (302)
T PRK08300 3 SKLKVAIIG-SGNIGTDLMIKILRSEH------LEPGAMVGIDPESDGLARARRLG------VATS---AEGIDGLLAMP 66 (302)
T ss_pred CCCeEEEEc-CcHHHHHHHHHHhcCCC------cEEEEEEeCChhhHHHHHHHHcC------CCcc---cCCHHHHHhCc
Confidence 468999999 89999998888876431 454 5788887642 23344432 2211 1333434332
Q ss_pred -HcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCc
Q 012947 86 -CSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGE 123 (452)
Q Consensus 86 -~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge 123 (452)
+.++|+|+.+.+.... ......+.++|+|.||.+.-
T Consensus 67 ~~~dIDiVf~AT~a~~H--~e~a~~a~eaGk~VID~sPA 103 (302)
T PRK08300 67 EFDDIDIVFDATSAGAH--VRHAAKLREAGIRAIDLTPA 103 (302)
T ss_pred CCCCCCEEEECCCHHHH--HHHHHHHHHcCCeEEECCcc
Confidence 2578999999976533 57788899999999999864
|
|
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.082 Score=52.39 Aligned_cols=93 Identities=17% Similarity=0.193 Sum_probs=58.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCC-HHHHHHHHcC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTD-PPSLHRLCSQ 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d-~~sl~~~~~~ 88 (452)
.-+++|+||+|.+|+.+++.+...| .+++++.|+.++.+.+ ++++ ... ..|..+ .+.+.+. .+
T Consensus 163 ~~~vlI~ga~g~vG~~~~~~a~~~g-------~~v~~~~~~~~~~~~~-~~~~------~~~-~~~~~~~~~~~~~~-~~ 226 (332)
T cd08259 163 GDTVLVTGAGGGVGIHAIQLAKALG-------ARVIAVTRSPEKLKIL-KELG------ADY-VIDGSKFSEDVKKL-GG 226 (332)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcC-------CeEEEEeCCHHHHHHH-HHcC------CcE-EEecHHHHHHHHhc-cC
Confidence 3479999999999999999999888 7888889988877655 4332 111 123222 1223332 26
Q ss_pred ccEEeecCCCCCCCCHHHHHHHHHhCCcEEEec
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDls 121 (452)
.|+|++|+|... ...+-.|...+-++|.+.
T Consensus 227 ~d~v~~~~g~~~---~~~~~~~~~~~g~~v~~g 256 (332)
T cd08259 227 ADVVIELVGSPT---IEESLRSLNKGGRLVLIG 256 (332)
T ss_pred CCEEEECCChHH---HHHHHHHhhcCCEEEEEc
Confidence 899999997432 222233334444566554
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.017 Score=56.43 Aligned_cols=82 Identities=18% Similarity=0.169 Sum_probs=61.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHH--HHH-HHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRV--KQA-LQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl--~~l-~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
...+|+|-||.-|.++++.|+..| +.|.-+.|..+.. ... +-++......++.++.+|++|..+|.++++
T Consensus 3 K~ALITGITGQDGsYLa~lLLekG-------Y~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~ 75 (345)
T COG1089 3 KVALITGITGQDGSYLAELLLEKG-------YEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILE 75 (345)
T ss_pred ceEEEecccCCchHHHHHHHHhcC-------cEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHH
Confidence 468999999999999999999998 8888877753321 110 111111123457899999999999999998
Q ss_pred --CccEEeecCCCC
Q 012947 88 --QTKLLLNCVGPY 99 (452)
Q Consensus 88 --~~dvVIn~aGp~ 99 (452)
+.|-|.|.++..
T Consensus 76 ~v~PdEIYNLaAQS 89 (345)
T COG1089 76 EVQPDEIYNLAAQS 89 (345)
T ss_pred hcCchhheeccccc
Confidence 579999998753
|
|
| >PTZ00142 6-phosphogluconate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.075 Score=56.44 Aligned_cols=118 Identities=13% Similarity=0.071 Sum_probs=67.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
.+|-|+|. |-.|..+++.|+++| ++|.+.+|++++.+++.+... .....+.. ..+.+++.+.++++|
T Consensus 2 ~~IgvIGL-G~MG~~lA~nL~~~G-------~~V~v~dr~~~~~~~l~~~~~---~~g~~i~~--~~s~~e~v~~l~~~d 68 (470)
T PTZ00142 2 SDIGLIGL-AVMGQNLALNIASRG-------FKISVYNRTYEKTEEFVKKAK---EGNTRVKG--YHTLEELVNSLKKPR 68 (470)
T ss_pred CEEEEEeE-hHHHHHHHHHHHHCC-------CeEEEEeCCHHHHHHHHHhhh---hcCCccee--cCCHHHHHhcCCCCC
Confidence 36889996 899999999999998 899999999999988876421 01111111 223333333333577
Q ss_pred EEeecCCCCCCCCHHHHHHHH---HhCCcEEEecCcH-HHHHHHHHHHHHHHHhCccEEE
Q 012947 91 LLLNCVGPYRLHGDPVAAACV---HSGCDYLDISGEP-EFMERMEARYHEKAVETGSLLV 146 (452)
Q Consensus 91 vVIn~aGp~~~~~~~vv~ac~---~~g~~yvDlsge~-~~~~~~~~~~~~~A~~~gv~iv 146 (452)
+||-++-+.... +.+++... ..|...||.+... .-..+. .+..+++|+..+
T Consensus 69 ~Iil~v~~~~~v-~~vi~~l~~~L~~g~iIID~gn~~~~dt~~r----~~~l~~~Gi~fl 123 (470)
T PTZ00142 69 KVILLIKAGEAV-DETIDNLLPLLEKGDIIIDGGNEWYLNTERR----IKRCEEKGILYL 123 (470)
T ss_pred EEEEEeCChHHH-HHHHHHHHhhCCCCCEEEECCCCCHHHHHHH----HHHHHHcCCeEE
Confidence 777766432211 22332222 2345567765432 222222 234445566554
|
|
| >PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.046 Score=59.91 Aligned_cols=89 Identities=15% Similarity=0.139 Sum_probs=68.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-HcC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQ 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~-~~~ 88 (452)
+.+++|.|. |-+|+.+++.|.+++ .++.+.++|+++.+++.+ ....++.+|.+|++.++++ +++
T Consensus 400 ~~~vII~G~-Gr~G~~va~~L~~~g-------~~vvvID~d~~~v~~~~~-------~g~~v~~GDat~~~~L~~agi~~ 464 (601)
T PRK03659 400 KPQVIIVGF-GRFGQVIGRLLMANK-------MRITVLERDISAVNLMRK-------YGYKVYYGDATQLELLRAAGAEK 464 (601)
T ss_pred cCCEEEecC-chHHHHHHHHHHhCC-------CCEEEEECCHHHHHHHHh-------CCCeEEEeeCCCHHHHHhcCCcc
Confidence 356888886 888999999999988 789999999999887654 2468999999999999876 778
Q ss_pred ccEEeecCCCCCCCCHHHHHHHHHhC
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACVHSG 114 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~~~g 114 (452)
+|+||-+.+- ......++..+.+..
T Consensus 465 A~~vv~~~~d-~~~n~~i~~~~r~~~ 489 (601)
T PRK03659 465 AEAIVITCNE-PEDTMKIVELCQQHF 489 (601)
T ss_pred CCEEEEEeCC-HHHHHHHHHHHHHHC
Confidence 9999988742 112234445555543
|
|
| >PRK06349 homoserine dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.35 Score=50.81 Aligned_cols=119 Identities=18% Similarity=0.157 Sum_probs=74.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCC---CCCCceE-EEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNF---PSSPIKS-LALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~---~~~~~~~-v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
+++|.|+|. |.+|+.+++.|.++.+. ......+ +.+++|+.++.+. .. .....+ .+ +++++
T Consensus 3 ~i~VgiiG~-G~VG~~~~~~L~~~~~~l~~~~g~~i~l~~V~~~~~~~~~~----~~---~~~~~~----~~---d~~~l 67 (426)
T PRK06349 3 PLKVGLLGL-GTVGSGVVRILEENAEEIAARAGRPIEIKKVAVRDLEKDRG----VD---LPGILL----TT---DPEEL 67 (426)
T ss_pred eEEEEEEee-CHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEeCChhhccC----CC---Ccccce----eC---CHHHH
Confidence 578999995 99999999988665310 0000144 4567888766431 11 011111 12 35556
Q ss_pred Hc--CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEE
Q 012947 86 CS--QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLV 146 (452)
Q Consensus 86 ~~--~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv 146 (452)
++ ++|+||.|.|+... ....+..|+++|.|.|-.+ ......-...+.+.|+++|+.+.
T Consensus 68 l~d~~iDvVve~tg~~~~-~~~~~~~aL~~GkhVVtaN--K~~~a~~~~eL~~lA~~~gv~l~ 127 (426)
T PRK06349 68 VNDPDIDIVVELMGGIEP-ARELILKALEAGKHVVTAN--KALLAVHGAELFAAAEEKGVDLY 127 (426)
T ss_pred hhCCCCCEEEECCCCchH-HHHHHHHHHHCCCeEEEcC--HHHHHHHHHHHHHHHHHcCCcEE
Confidence 64 57999999876533 3678899999999987443 23333344667788999998765
|
|
| >PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms [] | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.11 Score=45.19 Aligned_cols=45 Identities=20% Similarity=0.215 Sum_probs=36.9
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEE--EecChhHHHHHHHHhC
Q 012947 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLAL--AGRNPTRVKQALQWAS 62 (452)
Q Consensus 13 ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~i--agR~~~kl~~l~~~l~ 62 (452)
|.|+|+||-||+...+-+.++.+ .++|.. +++|.+++.+...++.
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d-----~f~v~~Lsa~~n~~~L~~q~~~f~ 47 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPD-----KFEVVALSAGSNIEKLAEQAREFK 47 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTT-----TEEEEEEEESSTHHHHHHHHHHHT
T ss_pred CEEEcCCcHHHHHHHHHHHhCCC-----ceEEEEEEcCCCHHHHHHHHHHhC
Confidence 68999999999999999988763 266643 5788999998888874
|
In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A .... |
| >TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.065 Score=53.10 Aligned_cols=106 Identities=17% Similarity=0.102 Sum_probs=68.3
Q ss_pred CCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCccEEeecCC
Q 012947 18 ASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKLLLNCVG 97 (452)
Q Consensus 18 ATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~dvVIn~aG 97 (452)
|.|.+|..+++.|++.+ ++|.+.+|+.++.+.+.+. .+. .. .+..++++++|+||.|+.
T Consensus 3 GlG~mG~~mA~~L~~~G-------~~V~v~dr~~~~~~~l~~~-------g~~--~~-----~s~~~~~~~advVil~vp 61 (288)
T TIGR01692 3 GLGNMGGPMAANLLKAG-------HPVRVFDLFPDAVEEAVAA-------GAQ--AA-----ASPAEAAEGADRVITMLP 61 (288)
T ss_pred cccHhHHHHHHHHHhCC-------CeEEEEeCCHHHHHHHHHc-------CCe--ec-----CCHHHHHhcCCEEEEeCC
Confidence 46999999999999988 7899999999998776541 111 11 235667889999999986
Q ss_pred CCCCCCHHHH------HHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcC
Q 012947 98 PYRLHGDPVA------AACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSA 148 (452)
Q Consensus 98 p~~~~~~~vv------~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~ 148 (452)
+.... ..++ ......+..+||.++..+-.. ....+.+++.|+.++-+
T Consensus 62 ~~~~~-~~v~~g~~~l~~~~~~g~~vid~st~~p~~~---~~~~~~~~~~g~~~vda 114 (288)
T TIGR01692 62 AGQHV-ISVYSGDEGILPKVAKGSLLIDCSTIDPDSA---RKLAELAAAHGAVFMDA 114 (288)
T ss_pred ChHHH-HHHHcCcchHhhcCCCCCEEEECCCCCHHHH---HHHHHHHHHcCCcEEEC
Confidence 43211 2222 112234566889886544322 22345556677776644
|
This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446). |
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.068 Score=56.18 Aligned_cols=90 Identities=17% Similarity=0.228 Sum_probs=59.1
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-Cc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-QT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-~~ 89 (452)
.+++|+|+++ +|..+++.|++.| ++|.+.+++........+++. ...+.+...+ ++..+ .. .+
T Consensus 6 k~v~v~G~g~-~G~s~a~~l~~~G-------~~V~~~d~~~~~~~~~~~~l~---~~g~~~~~~~--~~~~~---~~~~~ 69 (447)
T PRK02472 6 KKVLVLGLAK-SGYAAAKLLHKLG-------ANVTVNDGKPFSENPEAQELL---EEGIKVICGS--HPLEL---LDEDF 69 (447)
T ss_pred CEEEEEeeCH-HHHHHHHHHHHCC-------CEEEEEcCCCccchhHHHHHH---hcCCEEEeCC--CCHHH---hcCcC
Confidence 4799999987 9999999999998 899999987543333333332 1233443322 22222 23 48
Q ss_pred cEEeecCCCCCCCCHHHHHHHHHhCCcEE
Q 012947 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYL 118 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~~~g~~yv 118 (452)
|+||++.|... ..++++++.+.|+..+
T Consensus 70 d~vV~s~gi~~--~~~~~~~a~~~~i~v~ 96 (447)
T PRK02472 70 DLMVKNPGIPY--TNPMVEKALEKGIPII 96 (447)
T ss_pred CEEEECCCCCC--CCHHHHHHHHCCCcEE
Confidence 99999988543 2477888887776543
|
|
| >PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.088 Score=52.42 Aligned_cols=108 Identities=14% Similarity=0.143 Sum_probs=66.3
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCccE
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKL 91 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~dv 91 (452)
+|.|+|. |.+|..+++.|++.+ ++|.+.+|++++.+++.+. + +. ...+..++++++|+
T Consensus 3 ~Ig~IGl-G~mG~~mA~~l~~~G-------~~V~v~d~~~~~~~~~~~~-g------~~-------~~~s~~~~~~~aDv 60 (296)
T PRK15461 3 AIAFIGL-GQMGSPMASNLLKQG-------HQLQVFDVNPQAVDALVDK-G------AT-------PAASPAQAAAGAEF 60 (296)
T ss_pred eEEEEee-CHHHHHHHHHHHHCC-------CeEEEEcCCHHHHHHHHHc-C------Cc-------ccCCHHHHHhcCCE
Confidence 6888985 999999999999998 7999999999998776542 1 11 11234456778888
Q ss_pred EeecCCCCCCCCHHHHH------HHHHhCCcEEEecCcH-HHHHHHHHHHHHHHHhCccEEE
Q 012947 92 LLNCVGPYRLHGDPVAA------ACVHSGCDYLDISGEP-EFMERMEARYHEKAVETGSLLV 146 (452)
Q Consensus 92 VIn~aGp~~~~~~~vv~------ac~~~g~~yvDlsge~-~~~~~~~~~~~~~A~~~gv~iv 146 (452)
||-|+.+.... ..++. .....+.-+||.+.-. ...+++ .+..++.|+.++
T Consensus 61 Vi~~vp~~~~~-~~vl~~~~~i~~~l~~g~lvid~sT~~p~~~~~l----~~~l~~~g~~~l 117 (296)
T PRK15461 61 VITMLPNGDLV-RSVLFGENGVCEGLSRDALVIDMSTIHPLQTDKL----IADMQAKGFSMM 117 (296)
T ss_pred EEEecCCHHHH-HHHHcCcccHhhcCCCCCEEEECCCCCHHHHHHH----HHHHHHcCCcEE
Confidence 88887432110 11211 0122345578876543 333443 333444565554
|
|
| >TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.089 Score=52.73 Aligned_cols=129 Identities=13% Similarity=0.073 Sum_probs=71.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCC-CCCc-cEEEEeCCCHHHHHHHHcC
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSH-SLSI-PILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~-~~~v-~~v~~Dl~d~~sl~~~~~~ 88 (452)
++|.|+|+ |++|..++..|+..+. .+|++.+++++..+....++..+. .... ..+.. ..| .++ +++
T Consensus 2 ~KV~VIGa-G~vG~~iA~~la~~g~------~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~-t~d---~~~-~~~ 69 (305)
T TIGR01763 2 KKISVIGA-GFVGATTAFRLAEKEL------ADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTG-TNN---YAD-TAN 69 (305)
T ss_pred CEEEEECc-CHHHHHHHHHHHHcCC------CeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEe-cCC---HHH-hCC
Confidence 57999997 9999999999999872 379999997765543322221100 0011 12221 123 333 689
Q ss_pred ccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhhc
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQW 167 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~~ 167 (452)
+|+||-++|.....+..=.+... .....++.+.....+.. ..+.+|+ -+-|.|+.++.+.+.-
T Consensus 70 aDiVIitag~p~~~~~sR~~l~~----------~N~~iv~~i~~~I~~~~-p~~~iIv-----~tNP~di~t~~~~~~s 132 (305)
T TIGR01763 70 SDIVVITAGLPRKPGMSREDLLS----------MNAGIVREVTGRIMEHS-PNPIIVV-----VSNPLDAMTYVAWQKS 132 (305)
T ss_pred CCEEEEcCCCCCCcCCCHHHHHH----------HHHHHHHHHHHHHHHHC-CCeEEEE-----ecCcHHHHHHHHHHHH
Confidence 99999999954332211001000 12233444433333322 2333333 2468899999888773
|
The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable. |
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.055 Score=54.74 Aligned_cols=74 Identities=16% Similarity=0.196 Sum_probs=51.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCH---HHHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDP---PSLHRLC 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~---~sl~~~~ 86 (452)
.-++||+||+|.+|...++.+...| .+++++..+.+|.+ .+.+++. + ...|..++ +.+.++.
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk~~G-------~~~v~~~~s~~k~~-~~~~lGA------d-~vi~y~~~~~~~~v~~~t 207 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAKALG-------ATVVAVVSSSEKLE-LLKELGA------D-HVINYREEDFVEQVRELT 207 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHHHcC-------CcEEEEecCHHHHH-HHHhcCC------C-EEEcCCcccHHHHHHHHc
Confidence 3579999999999999999988887 56666666677776 6666642 1 12233332 3444444
Q ss_pred c--CccEEeecCCC
Q 012947 87 S--QTKLLLNCVGP 98 (452)
Q Consensus 87 ~--~~dvVIn~aGp 98 (452)
. ++|+|++++|.
T Consensus 208 ~g~gvDvv~D~vG~ 221 (326)
T COG0604 208 GGKGVDVVLDTVGG 221 (326)
T ss_pred CCCCceEEEECCCH
Confidence 3 58999999873
|
|
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.11 Score=52.04 Aligned_cols=93 Identities=11% Similarity=0.072 Sum_probs=59.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCce-EEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCH---HHHHHHH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIK-SLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDP---PSLHRLC 86 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~-~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~---~sl~~~~ 86 (452)
-+++|+||+|.+|..+++.+...| . +|+++.+++++.+.+.++++. .. ..|..+. +.+.+..
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~G-------~~~Vi~~~~s~~~~~~~~~~lGa------~~-vi~~~~~~~~~~i~~~~ 221 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLLG-------CSRVVGICGSDEKCQLLKSELGF------DA-AINYKTDNVAERLRELC 221 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcC-------CCEEEEEcCCHHHHHHHHHhcCC------cE-EEECCCCCHHHHHHHHC
Confidence 579999999999999998877777 6 788889999988777665642 21 2233331 2233322
Q ss_pred -cCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEe
Q 012947 87 -SQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDI 120 (452)
Q Consensus 87 -~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDl 120 (452)
.++|+||+++|... ..-.-.|+..+-++|.+
T Consensus 222 ~~gvd~vid~~g~~~---~~~~~~~l~~~G~iv~~ 253 (345)
T cd08293 222 PEGVDVYFDNVGGEI---SDTVISQMNENSHIILC 253 (345)
T ss_pred CCCceEEEECCCcHH---HHHHHHHhccCCEEEEE
Confidence 25899999987321 11122344455556655
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.063 Score=53.72 Aligned_cols=79 Identities=16% Similarity=0.183 Sum_probs=52.1
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~-~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
++|.|+|+ |.+|..++..|++.+ ++|.+.+|++++++++.+..... ....... ...+.-..+.++.++++
T Consensus 2 mkI~iiG~-G~mG~~~a~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 72 (325)
T PRK00094 2 MKIAVLGA-GSWGTALAIVLARNG-------HDVTLWARDPEQAAEINADRENPRYLPGIKL-PDNLRATTDLAEALADA 72 (325)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCC-------CEEEEEECCHHHHHHHHHcCcccccCCCCcC-CCCeEEeCCHHHHHhCC
Confidence 47999997 999999999999988 78999999999887776532100 0000000 00011112345567789
Q ss_pred cEEeecCCC
Q 012947 90 KLLLNCVGP 98 (452)
Q Consensus 90 dvVIn~aGp 98 (452)
|+||-|+.+
T Consensus 73 D~vi~~v~~ 81 (325)
T PRK00094 73 DLILVAVPS 81 (325)
T ss_pred CEEEEeCCH
Confidence 999999854
|
|
| >PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.085 Score=53.73 Aligned_cols=102 Identities=14% Similarity=0.090 Sum_probs=65.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEE-EEecChhHHHHHHHHhCCCC----CCCcc-EE--EEeCCCHHHH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLA-LAGRNPTRVKQALQWASPSH----SLSIP-IL--TADTTDPPSL 82 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~-iagR~~~kl~~l~~~l~~~~----~~~v~-~v--~~Dl~d~~sl 82 (452)
++|.|.|+ |.+|+.+++.+..+.. .+++ +.+++.+..+.+.+..+.+. +.... +- ...+. ..+
T Consensus 2 ikVaI~G~-GrIGr~va~al~~~~d------~eLvav~d~~~~~~~~la~~~G~~~~~~~~~~~~~~~~~~i~V~--~~~ 72 (341)
T PRK04207 2 IKVGVNGY-GTIGKRVADAVAAQPD------MELVGVAKTKPDYEARVAVEKGYPLYVADPEREKAFEEAGIPVA--GTI 72 (341)
T ss_pred eEEEEECC-CHHHHHHHHHHhcCCC------cEEEEEECCChHHHHHHHHhcCCCccccCccccccccCCceEEc--CCh
Confidence 58999999 9999999999887642 5554 45556555554444332100 00000 00 00111 224
Q ss_pred HHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCc
Q 012947 83 HRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGE 123 (452)
Q Consensus 83 ~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge 123 (452)
++++.++|+||.|.+++. .....+.|+++|+..|+.+++
T Consensus 73 ~el~~~vDVVIdaT~~~~--~~e~a~~~~~aGk~VI~~~~~ 111 (341)
T PRK04207 73 EDLLEKADIVVDATPGGV--GAKNKELYEKAGVKAIFQGGE 111 (341)
T ss_pred hHhhccCCEEEECCCchh--hHHHHHHHHHCCCEEEEcCCC
Confidence 455678999999998764 367889999999999999885
|
|
| >PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.19 Score=53.87 Aligned_cols=99 Identities=15% Similarity=0.181 Sum_probs=62.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCC----------
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTD---------- 78 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d---------- 78 (452)
.+-+++|+|+ |-+|...++.+...| .+|.+.++++++++.. ++++. .++..|..+
T Consensus 164 pg~kVlViGa-G~iGL~Ai~~Ak~lG-------A~V~a~D~~~~rle~a-eslGA------~~v~i~~~e~~~~~~gya~ 228 (509)
T PRK09424 164 PPAKVLVIGA-GVAGLAAIGAAGSLG-------AIVRAFDTRPEVAEQV-ESMGA------EFLELDFEEEGGSGDGYAK 228 (509)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHH-HHcCC------eEEEeccccccccccchhh
Confidence 4678999998 899999999999888 6899999999998654 44542 333232211
Q ss_pred ----H--HH----HHHHHcCccEEeecCCCCCC-CCHHHHHHHHH---hCCcEEEecC
Q 012947 79 ----P--PS----LHRLCSQTKLLLNCVGPYRL-HGDPVAAACVH---SGCDYLDISG 122 (452)
Q Consensus 79 ----~--~s----l~~~~~~~dvVIn~aGp~~~-~~~~vv~ac~~---~g~~yvDlsg 122 (452)
. +. +.+.++++|+||+|+|.... ....+.+.+++ .|-..||+.-
T Consensus 229 ~~s~~~~~~~~~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~ 286 (509)
T PRK09424 229 VMSEEFIKAEMALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAA 286 (509)
T ss_pred hcchhHHHHHHHHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEcc
Confidence 1 11 12223579999999984321 11122244443 3445666653
|
|
| >TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.1 Score=51.71 Aligned_cols=117 Identities=15% Similarity=0.144 Sum_probs=75.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~- 88 (452)
+-+|+|.|.||..|+.+.+.|...+ .+ .+++-|+.+-.+. +.-+. --.++.++-+.
T Consensus 6 ~~~~~~~g~~~~~~~~~~~~~~~~g-------~~-~v~~V~p~~~~~~-----------v~G~~----~y~sv~dlp~~~ 62 (286)
T TIGR01019 6 DTKVIVQGITGSQGSFHTEQMLAYG-------TN-IVGGVTPGKGGTT-----------VLGLP----VFDSVKEAVEET 62 (286)
T ss_pred CCcEEEecCCcHHHHHHHHHHHhCC-------CC-EEEEECCCCCcce-----------ecCee----ccCCHHHHhhcc
Confidence 3479999999999999999998877 55 5566666532111 11111 12334555444
Q ss_pred -ccEEeecCCCCCCCCHHHHHHHHHhCCcEE-EecCcHHHHHHHHHHHHHHHHhCccEEE--cCCCCCc
Q 012947 89 -TKLLLNCVGPYRLHGDPVAAACVHSGCDYL-DISGEPEFMERMEARYHEKAVETGSLLV--SACGFDS 153 (452)
Q Consensus 89 -~dvVIn~aGp~~~~~~~vv~ac~~~g~~yv-Dlsge~~~~~~~~~~~~~~A~~~gv~iv--~~~G~~s 153 (452)
+|++|-++.+.. -..+++.|.+.|++.+ =++.-.. +....++.+.|++.|++|+ ||.|+-.
T Consensus 63 ~~Dlavi~vpa~~--v~~~l~e~~~~Gvk~avIis~Gf~--e~~~~~l~~~a~~~girilGPNc~Giin 127 (286)
T TIGR01019 63 GANASVIFVPAPF--AADAIFEAIDAGIELIVCITEGIP--VHDMLKVKRYMEESGTRLIGPNCPGIIT 127 (286)
T ss_pred CCCEEEEecCHHH--HHHHHHHHHHCCCCEEEEECCCCC--HHHHHHHHHHHHHcCCEEECCCCceEEc
Confidence 799999885432 2578899999999743 3332222 2233566788999999999 5667643
|
ATP citrate lyases appear to form an outgroup. |
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.11 Score=52.00 Aligned_cols=74 Identities=16% Similarity=0.054 Sum_probs=50.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH---H
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL---C 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~---~ 86 (452)
.-.|+|+||+|.+|..+++.+...| .++++..++.++.+.+ .+++ ... ..|..+.+.+.+. .
T Consensus 139 g~~VLI~ga~g~vG~~aiqlAk~~G-------~~Vi~~~~s~~~~~~~-~~lG------a~~-vi~~~~~~~~~~~~~~~ 203 (325)
T TIGR02825 139 GETVMVNAAAGAVGSVVGQIAKLKG-------CKVVGAAGSDEKVAYL-KKLG------FDV-AFNYKTVKSLEETLKKA 203 (325)
T ss_pred CCEEEEeCCccHHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHH-HHcC------CCE-EEeccccccHHHHHHHh
Confidence 3579999999999999998877777 7888899999887665 4453 121 2233332222222 2
Q ss_pred --cCccEEeecCCC
Q 012947 87 --SQTKLLLNCVGP 98 (452)
Q Consensus 87 --~~~dvVIn~aGp 98 (452)
.++|+|++++|.
T Consensus 204 ~~~gvdvv~d~~G~ 217 (325)
T TIGR02825 204 SPDGYDCYFDNVGG 217 (325)
T ss_pred CCCCeEEEEECCCH
Confidence 257999998873
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >PLN03154 putative allyl alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.067 Score=54.36 Aligned_cols=74 Identities=16% Similarity=0.070 Sum_probs=51.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCH----HHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDP----PSLHRL 85 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~----~sl~~~ 85 (452)
.-.++|+||+|.+|..+++.+...| .+++++.++.++.+.+.++++. .. ..|..+. +.+.+.
T Consensus 159 g~~VlV~GaaG~vG~~aiqlAk~~G-------~~Vi~~~~~~~k~~~~~~~lGa------~~-vi~~~~~~~~~~~i~~~ 224 (348)
T PLN03154 159 GDSVFVSAASGAVGQLVGQLAKLHG-------CYVVGSAGSSQKVDLLKNKLGF------DE-AFNYKEEPDLDAALKRY 224 (348)
T ss_pred CCEEEEecCccHHHHHHHHHHHHcC-------CEEEEEcCCHHHHHHHHHhcCC------CE-EEECCCcccHHHHHHHH
Confidence 3579999999999999998888777 7888888999988766555641 21 2233322 222222
Q ss_pred H-cCccEEeecCC
Q 012947 86 C-SQTKLLLNCVG 97 (452)
Q Consensus 86 ~-~~~dvVIn~aG 97 (452)
. .++|+|++|+|
T Consensus 225 ~~~gvD~v~d~vG 237 (348)
T PLN03154 225 FPEGIDIYFDNVG 237 (348)
T ss_pred CCCCcEEEEECCC
Confidence 2 25799999887
|
|
| >TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.13 Score=55.01 Aligned_cols=98 Identities=15% Similarity=0.211 Sum_probs=62.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCC-----------
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTT----------- 77 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~----------- 77 (452)
.+-+++|+|+ |-+|...++.+...| .+|.+.+++.++++... .++ ...+..|..
T Consensus 163 p~akVlViGa-G~iGl~Aa~~ak~lG-------A~V~v~d~~~~rle~a~-~lG------a~~v~v~~~e~g~~~~gYa~ 227 (511)
T TIGR00561 163 PPAKVLVIGA-GVAGLAAIGAANSLG-------AIVRAFDTRPEVKEQVQ-SMG------AEFLELDFKEEGGSGDGYAK 227 (511)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHH-HcC------CeEEecccccccccccccee
Confidence 3578999997 999999999999988 67999999999876544 353 233333321
Q ss_pred ---CHHH------HHHHHcCccEEeecC---CC-CC-CCCHHHHHHHHHhCCcEEEecC
Q 012947 78 ---DPPS------LHRLCSQTKLLLNCV---GP-YR-LHGDPVAAACVHSGCDYLDISG 122 (452)
Q Consensus 78 ---d~~s------l~~~~~~~dvVIn~a---Gp-~~-~~~~~vv~ac~~~g~~yvDlsg 122 (452)
++.. +.+.++++|+||+|+ |- .. ...+.. -...+.|...||++.
T Consensus 228 ~~s~~~~~~~~~~~~e~~~~~DIVI~TalipG~~aP~Lit~em-v~~MKpGsvIVDlA~ 285 (511)
T TIGR00561 228 VMSEEFIAAEMELFAAQAKEVDIIITTALIPGKPAPKLITEEM-VDSMKAGSVIVDLAA 285 (511)
T ss_pred ecCHHHHHHHHHHHHHHhCCCCEEEECcccCCCCCCeeehHHH-HhhCCCCCEEEEeee
Confidence 1111 455667899999999 41 11 111222 223334556777764
|
In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff. |
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.078 Score=50.32 Aligned_cols=61 Identities=15% Similarity=0.236 Sum_probs=47.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~-- 88 (452)
.+|+|+|++|.+|++|.+-+..++.++ -+|+..+.. .+|+++.++.++++++
T Consensus 2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~----e~wvf~~sk----------------------d~DLt~~a~t~~lF~~ek 55 (315)
T KOG1431|consen 2 KKILVTGGTGLVGSAIVKVVQEQGFDD----ENWVFIGSK----------------------DADLTNLADTRALFESEK 55 (315)
T ss_pred ceEEEecCCchHHHHHHHHHHhcCCCC----cceEEeccc----------------------cccccchHHHHHHHhccC
Confidence 589999999999999999999988522 578877642 2577788888888874
Q ss_pred ccEEeecCC
Q 012947 89 TKLLLNCVG 97 (452)
Q Consensus 89 ~dvVIn~aG 97 (452)
.--|||.|.
T Consensus 56 PthVIhlAA 64 (315)
T KOG1431|consen 56 PTHVIHLAA 64 (315)
T ss_pred CceeeehHh
Confidence 567788763
|
|
| >KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.096 Score=52.17 Aligned_cols=74 Identities=18% Similarity=0.200 Sum_probs=61.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
-..+.|.|+.| +|..-+++...-| .+|.+++++..|-+++.+.|++ +.+..-..|++.++++.+-.
T Consensus 182 G~~vgI~GlGG-LGh~aVq~AKAMG-------~rV~vis~~~~kkeea~~~LGA------d~fv~~~~d~d~~~~~~~~~ 247 (360)
T KOG0023|consen 182 GKWVGIVGLGG-LGHMAVQYAKAMG-------MRVTVISTSSKKKEEAIKSLGA------DVFVDSTEDPDIMKAIMKTT 247 (360)
T ss_pred CcEEEEecCcc-cchHHHHHHHHhC-------cEEEEEeCCchhHHHHHHhcCc------ceeEEecCCHHHHHHHHHhh
Confidence 35799999988 9999999988888 8999999999887888887753 44444445889999999988
Q ss_pred cEEeecCC
Q 012947 90 KLLLNCVG 97 (452)
Q Consensus 90 dvVIn~aG 97 (452)
|.++|++.
T Consensus 248 dg~~~~v~ 255 (360)
T KOG0023|consen 248 DGGIDTVS 255 (360)
T ss_pred cCcceeee
Confidence 99988885
|
|
| >TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p | Back alignment and domain information |
|---|
Probab=95.15 E-value=0.12 Score=56.28 Aligned_cols=104 Identities=13% Similarity=0.105 Sum_probs=65.2
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC----------------------hhHHHHHHHHhCC-CC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN----------------------PTRVKQALQWASP-SH 65 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~----------------------~~kl~~l~~~l~~-~~ 65 (452)
+..+|+|+|| |.+|..++++|++.|. -++++++.+ ..|.+.+.+.+.. ..
T Consensus 337 ~~~kVLIvGa-GGLGs~VA~~La~~GV------g~ItlVD~D~Ve~SNL~RQ~Lf~~~Dv~~~Gk~KA~aAa~~Lk~InP 409 (664)
T TIGR01381 337 SQLKVLLLGA-GTLGCNVARCLIGWGV------RHITFVDNGKVSYSNPVRQSLSNFEDCLLGGRGKAETAQKALKRIFP 409 (664)
T ss_pred hcCeEEEECC-cHHHHHHHHHHHHcCC------CeEEEEcCCEECCCccccccccchhhhhhcCCcHHHHHHHHHHHHCC
Confidence 3568999998 7789999999999984 456666542 1133333333321 11
Q ss_pred CCCccEEEEeC-------C---------CHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEe
Q 012947 66 SLSIPILTADT-------T---------DPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDI 120 (452)
Q Consensus 66 ~~~v~~v~~Dl-------~---------d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDl 120 (452)
..++..+...+ + |.+.+.+++++.|+||.|.--+.. ...+-.+|...+...|+.
T Consensus 410 ~v~i~~~~~~Ipm~Gh~i~~~~~~~~~~d~~~l~~Li~~~DvV~d~tDn~es-R~L~n~~c~~~~kplI~a 479 (664)
T TIGR01381 410 SIQATGHRLTVPMPGHPIDEKDVPELEKDIARLEQLIKDHDVVFLLLDSREA-RWLPTVLCSRHKKIAISA 479 (664)
T ss_pred CcEEEEeeeeeccccccCCchhhhhccccHHHHHHHHhhCCEEEECCCCHHH-HHHHHHHHHHhCCCEEEE
Confidence 22333333332 1 225678889999999999853321 134668888888887765
|
This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy. |
| >TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating | Back alignment and domain information |
|---|
Probab=95.13 E-value=0.19 Score=53.44 Aligned_cols=116 Identities=15% Similarity=0.122 Sum_probs=74.4
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCccE
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKL 91 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~dv 91 (452)
+|-|+|- |-+|..+++.|++.| ++|.+.+|+.++.+++.++.. ... .+. ...+.+++.+.++++|+
T Consensus 1 ~IG~IGL-G~MG~~mA~nL~~~G-------~~V~v~drt~~~~~~l~~~~~---~g~-~~~--~~~s~~e~v~~l~~~dv 66 (467)
T TIGR00873 1 DIGVIGL-AVMGSNLALNMADHG-------FTVSVYNRTPEKTDEFLAEHA---KGK-KIV--GAYSIEEFVQSLERPRK 66 (467)
T ss_pred CEEEEee-HHHHHHHHHHHHhcC-------CeEEEEeCCHHHHHHHHhhcc---CCC-Cce--ecCCHHHHHhhcCCCCE
Confidence 3667774 899999999999998 899999999999988876421 010 111 23455666666678999
Q ss_pred EeecCCCCCCCCHHHHHHHH---HhCCcEEEecCc-HHHHHHHHHHHHHHHHhCccEEE
Q 012947 92 LLNCVGPYRLHGDPVAAACV---HSGCDYLDISGE-PEFMERMEARYHEKAVETGSLLV 146 (452)
Q Consensus 92 VIn~aGp~~~~~~~vv~ac~---~~g~~yvDlsge-~~~~~~~~~~~~~~A~~~gv~iv 146 (452)
||-|+-+.... +.+++... ..|...||.+.. +.-+.+. .+..++.|+..+
T Consensus 67 Iil~v~~~~~v-~~Vi~~l~~~L~~g~iIID~gns~~~~t~~~----~~~l~~~gi~fv 120 (467)
T TIGR00873 67 IMLMVKAGAPV-DAVINQLLPLLEKGDIIIDGGNSHYPDTERR----YKELKAKGILFV 120 (467)
T ss_pred EEEECCCcHHH-HHHHHHHHhhCCCCCEEEECCCcCHHHHHHH----HHHHHhcCCEEE
Confidence 99988543222 33443332 346668998753 3433333 233455677765
|
This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason. |
| >PLN02696 1-deoxy-D-xylulose-5-phosphate reductoisomerase | Back alignment and domain information |
|---|
Probab=95.11 E-value=0.41 Score=50.20 Aligned_cols=125 Identities=14% Similarity=0.131 Sum_probs=77.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEE--EEecChhHHHHHHHHhCCCCCCCccEEEEeC-----------
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLA--LAGRNPTRVKQALQWASPSHSLSIPILTADT----------- 76 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~--iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl----------- 76 (452)
+.+|.|+|+||-||+.+.+-+.++.+ .++|. .+++|.+.+.+...++.. +. +...|-
T Consensus 57 ~KkI~ILGSTGSIGtqtLdVI~~~pd-----~f~vvaLaag~Ni~lL~~q~~~f~p----~~-v~v~d~~~~~~l~~~l~ 126 (454)
T PLN02696 57 PKPISLLGSTGSIGTQTLDIVAENPD-----KFKVVALAAGSNVTLLADQVRKFKP----KL-VAVRNESLVDELKEALA 126 (454)
T ss_pred ccEEEEecCCcHhhHHHHHHHHhCcc-----ccEEEEEECCCCHHHHHHHHHHhCC----CE-EEEcCHHHHHHHHHhhc
Confidence 46899999999999999999887642 15553 356788888887777742 11 111121
Q ss_pred ---------CCHHHHHHHHc--CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEE
Q 012947 77 ---------TDPPSLHRLCS--QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLL 145 (452)
Q Consensus 77 ---------~d~~sl~~~~~--~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~i 145 (452)
..++.+.+++. ++|+||+..+-+ .|..-.-+++++|.+..=.+=|...+.- +.....+++.++.|
T Consensus 127 ~~~~~~~vl~G~egl~~la~~~evDiVV~AIvG~--aGL~pTl~AIkaGK~VALANKESLV~aG--~lI~~~ak~~~~~I 202 (454)
T PLN02696 127 DLDDKPEIIPGEEGIVEVARHPEAVTVVTGIVGC--AGLKPTVAAIEAGKDIALANKETLIAGG--PFVLPLAKKHGVKI 202 (454)
T ss_pred CCCCCcEEEECHHHHHHHHcCCCCCEEEEeCccc--cchHHHHHHHHCCCcEEEecHHHHHhhH--HHHHHHHHHcCCeE
Confidence 12356677776 469999986543 2333346677888775544434333222 22345567778887
Q ss_pred EcC
Q 012947 146 VSA 148 (452)
Q Consensus 146 v~~ 148 (452)
++-
T Consensus 203 lPV 205 (454)
T PLN02696 203 LPA 205 (454)
T ss_pred eec
Confidence 754
|
|
| >TIGR03736 PRTRC_ThiF PRTRC system ThiF family protein | Back alignment and domain information |
|---|
Probab=95.04 E-value=0.17 Score=48.96 Aligned_cols=99 Identities=11% Similarity=0.130 Sum_probs=54.1
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHHcCCC----CCCCceEEEEEecCh------------------hHHHHHHHHhCCCC
Q 012947 8 PELFDVIILGASGFTGKYVVREALKLFNF----PSSPIKSLALAGRNP------------------TRVKQALQWASPSH 65 (452)
Q Consensus 8 ~~~~~ilV~GATG~iG~~va~~L~~~g~~----~~~~~~~v~iagR~~------------------~kl~~l~~~l~~~~ 65 (452)
+++.+|+|+|+ |.+|..+++.|++.|.. +.....++.+++.+. .|.+.+.+.+..-.
T Consensus 9 ~~~~~V~vvG~-GGlGs~v~~~Lar~G~a~~~~G~~~g~~i~lvD~D~Ve~sNLnRQlf~~~dVG~~Ka~v~~~ri~~~~ 87 (244)
T TIGR03736 9 SRPVSVVLVGA-GGTGSQVIAGLARLHHALKALGHPGGLAVTVYDDDTVSEANVGRQAFYPADVGQNKAIVLVNRLNQAM 87 (244)
T ss_pred hCCCeEEEEcC-ChHHHHHHHHHHHccccccccCCCCCCEEEEECCCEEccchhhcccCChhHCCcHHHHHHHHHHHhcc
Confidence 36789999998 77999999999987410 000013777777542 23333444442101
Q ss_pred CCCccEEEEeCCCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHH
Q 012947 66 SLSIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVH 112 (452)
Q Consensus 66 ~~~v~~v~~Dl~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~ 112 (452)
..+++.+...+.. + ..+.++|+||+|+--.. ....+.+.|.+
T Consensus 88 ~~~i~a~~~~~~~-~---~~~~~~DiVi~avDn~~-aR~~l~~~~~~ 129 (244)
T TIGR03736 88 GTDWTAHPERVER-S---STLHRPDIVIGCVDNRA-ARLAILRAFEG 129 (244)
T ss_pred CceEEEEEeeeCc-h---hhhcCCCEEEECCCCHH-HHHHHHHHHHH
Confidence 1233333333433 1 22457888888874221 11345566655
|
A novel genetic system characterized by six major proteins, included a ParB homolog and a ThiF homolog, is designated PRTRC, or ParB-Related,ThiF-Related Cassette. This family is the PRTRC system ThiF family protein. |
| >TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type | Back alignment and domain information |
|---|
Probab=94.97 E-value=0.084 Score=53.40 Aligned_cols=103 Identities=17% Similarity=0.243 Sum_probs=70.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..++.|+|+ |..|+.-++.|....+ ..+|.+.+|+.++.+++.+++.. ..+.+..+ ++.+++++++
T Consensus 128 ~~~lgiiG~-G~qA~~~l~al~~~~~-----~~~v~V~~r~~~~~~~~~~~~~~---~g~~v~~~-----~~~~eav~~a 193 (325)
T TIGR02371 128 SSVLGIIGA-GRQAWTQLEALSRVFD-----LEEVSVYCRTPSTREKFALRASD---YEVPVRAA-----TDPREAVEGC 193 (325)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCC-----CCEEEEECCCHHHHHHHHHHHHh---hCCcEEEe-----CCHHHHhccC
Confidence 457889975 8999998888876532 26899999999999988887641 12333333 2456778899
Q ss_pred cEEeecCCCCCCCCHHHH-HHHHHhCCcEEEecCcHHHHHHH
Q 012947 90 KLLLNCVGPYRLHGDPVA-AACVHSGCDYLDISGEPEFMERM 130 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv-~ac~~~g~~yvDlsge~~~~~~~ 130 (452)
|+||.|... .+|++ ...++.|+|.+-+....+..+++
T Consensus 194 DiVitaT~s----~~P~~~~~~l~~g~~v~~vGs~~p~~~El 231 (325)
T TIGR02371 194 DILVTTTPS----RKPVVKADWVSEGTHINAIGADAPGKQEL 231 (325)
T ss_pred CEEEEecCC----CCcEecHHHcCCCCEEEecCCCCcccccC
Confidence 999988732 24555 34567888877776555554443
|
This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity. |
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.95 E-value=0.051 Score=53.18 Aligned_cols=105 Identities=15% Similarity=0.236 Sum_probs=71.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec---ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR---NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR---~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
.+++|+|+.||||+..+.+++...|. .+.+..+. ... ++. +++.. ..++-.++..|+.|...+..++.
T Consensus 7 ~~vlItgg~gfi~Sn~~~~~~~~~p~-----~~~v~idkL~~~s~-~~~-l~~~~--n~p~ykfv~~di~~~~~~~~~~~ 77 (331)
T KOG0747|consen 7 KNVLITGGAGFIGSNFINYLVDKYPD-----YKFVNLDKLDYCSN-LKN-LEPVR--NSPNYKFVEGDIADADLVLYLFE 77 (331)
T ss_pred ceEEEecCcCcchhhhhhhcccCCCC-----CcEEEEeecccccc-cch-hhhhc--cCCCceEeeccccchHHHHhhhc
Confidence 67999999999999999999988752 44443332 111 222 22221 34678999999999988888776
Q ss_pred --CccEEeecCCCCCCC----------------CHHHHHHHHHhCC--cEEEecCcH
Q 012947 88 --QTKLLLNCVGPYRLH----------------GDPVAAACVHSGC--DYLDISGEP 124 (452)
Q Consensus 88 --~~dvVIn~aGp~~~~----------------~~~vv~ac~~~g~--~yvDlsge~ 124 (452)
..|.|||.|.-+... ...++++|...|- .+|++|.+-
T Consensus 78 ~~~id~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTde 134 (331)
T KOG0747|consen 78 TEEIDTVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDE 134 (331)
T ss_pred cCchhhhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccc
Confidence 579999988643321 1457777777743 477776543
|
|
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.93 E-value=0.076 Score=52.63 Aligned_cols=74 Identities=16% Similarity=0.262 Sum_probs=51.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
+..+++|+|++|.+|+.++..|.+.+ .+|.++.|... ++.+.+++
T Consensus 158 ~Gk~vvViG~gg~vGkpia~~L~~~g-------atVtv~~~~t~----------------------------~L~~~~~~ 202 (283)
T PRK14192 158 AGKHAVVVGRSAILGKPMAMMLLNAN-------ATVTICHSRTQ----------------------------NLPELVKQ 202 (283)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHhCC-------CEEEEEeCCch----------------------------hHHHHhcc
Confidence 34589999999999999999999887 68888887322 23344478
Q ss_pred ccEEeecCCCCCCCCHHHHHHHHHhCCcEEEec
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDls 121 (452)
+|+|||++|--. ++-...+..+.-.+|+.
T Consensus 203 aDIvI~AtG~~~----~v~~~~lk~gavViDvg 231 (283)
T PRK14192 203 ADIIVGAVGKPE----LIKKDWIKQGAVVVDAG 231 (283)
T ss_pred CCEEEEccCCCC----cCCHHHcCCCCEEEEEE
Confidence 999999997211 22233345555666664
|
|
| >cd05296 GH4_P_beta_glucosidase Glycoside Hydrolases Family 4; Phospho-beta-glucosidase | Back alignment and domain information |
|---|
Probab=94.83 E-value=0.49 Score=49.57 Aligned_cols=144 Identities=12% Similarity=0.134 Sum_probs=88.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC-hhHHHHHH---HHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-PTRVKQAL---QWASPSHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~-~~kl~~l~---~~l~~~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
++|+|+||.++-...+++.|++..+. . +.-++++.+.+ +++++.+. +.+-......+.+.. ..+.++++
T Consensus 1 ~KI~iIGaGS~~tp~li~~l~~~~~~-l-~~~ei~L~Did~~~rl~~v~~~~~~~~~~~~~~~~v~~-----t~d~~~al 73 (419)
T cd05296 1 MKLTIIGGGSSYTPELIEGLIRRYEE-L-PVTELVLVDIDEEEKLEIVGALAKRMVKKAGLPIKVHL-----TTDRREAL 73 (419)
T ss_pred CEEEEECCchHhHHHHHHHHHhcccc-C-CCCEEEEecCChHHHHHHHHHHHHHHHHhhCCCeEEEE-----eCCHHHHh
Confidence 58999999998888899999885421 1 22589999999 88875432 222111112333222 13478999
Q ss_pred cCccEEeecCCCCCCCC-HHHHHHHHHhCCcEEEecCcHHHHH---------HHHHHHHHHHHhCccEEEcCCCCCcchh
Q 012947 87 SQTKLLLNCVGPYRLHG-DPVAAACVHSGCDYLDISGEPEFME---------RMEARYHEKAVETGSLLVSACGFDSIPA 156 (452)
Q Consensus 87 ~~~dvVIn~aGp~~~~~-~~vv~ac~~~g~~yvDlsge~~~~~---------~~~~~~~~~A~~~gv~iv~~~G~~s~P~ 156 (452)
+++|.||+++++....+ ....+...+.|+..-|.+|...+.. .+.....+.+ ..+++++- +-|.
T Consensus 74 ~gadfVi~~~~vg~~~~r~~de~i~~~~Gi~gqET~G~GG~~~a~rni~ii~~i~~~i~~~~--Pda~lin~----TNP~ 147 (419)
T cd05296 74 EGADFVFTQIRVGGLEARALDERIPLKHGVIGQETTGAGGFAKALRTIPVILDIAEDVEELA--PDAWLINF----TNPA 147 (419)
T ss_pred CCCCEEEEEEeeCCcchhhhhhhhHHHcCCccccCCCcchHHHhhhhHHHHHHHHHHHHHHC--CCeEEEEe----cCHH
Confidence 99999999987544332 3455666777777667777654433 2222222222 24455543 4688
Q ss_pred hHHHHHHhhhc
Q 012947 157 ELGVMFNSRQW 167 (452)
Q Consensus 157 dl~~~~~~~~~ 167 (452)
|+.++.+.+..
T Consensus 148 ~ivt~a~~k~~ 158 (419)
T cd05296 148 GIVTEAVLRHT 158 (419)
T ss_pred HHHHHHHHHhc
Confidence 88888877665
|
Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases such as the phospho-beta-glucosidases. Other organisms (such as archaea and Thermotoga maritima ) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. The 6-phospho-beta-glucosidase from Thermotoga maritima hydrolylzes cellobiose 6-phosphate (6P) into glucose-6P and glucose, in an NAD+ and Mn2+ dependent fashion. The Escherichia coli 6-phospho-beta-glucosidase (also called celF) hydrolyzes a variety of phospho-beta-glucosides including cellobiose-6P, salicin-6P, arbutin-6P, and gentobiose-6P. Phospho-beta-glucosidases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein |
| >TIGR01771 L-LDH-NAD L-lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=94.77 E-value=0.27 Score=49.13 Aligned_cols=124 Identities=16% Similarity=0.144 Sum_probs=75.2
Q ss_pred EEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC--C-CCCCccEEEEeCCCHHHHHHHHcCccE
Q 012947 15 ILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--S-HSLSIPILTADTTDPPSLHRLCSQTKL 91 (452)
Q Consensus 15 V~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~--~-~~~~v~~v~~Dl~d~~sl~~~~~~~dv 91 (452)
|+|+ |.+|..++-.|+..+-. -++.+.+++.++++....++.. . ...++.+. ..| .+.++++|+
T Consensus 1 iIGa-G~VG~~~a~~l~~~~l~-----~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~---~~~----~~~~~daDi 67 (299)
T TIGR01771 1 IIGA-GNVGSSTAFALLNQGIA-----DEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIR---SGD----YSDCKDADL 67 (299)
T ss_pred CCCc-CHHHHHHHHHHHhcCCC-----CEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEe---cCC----HHHHCCCCE
Confidence 4576 99999999999887621 3799999999988887777742 0 11122222 233 457889999
Q ss_pred EeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhhc
Q 012947 92 LLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQW 167 (452)
Q Consensus 92 VIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~~ 167 (452)
||-++|.....++.=.+.... ....++.+.....+.+ -+++.|+- +-|.|+.++.+.+..
T Consensus 68 vVitag~~rk~g~~R~dll~~----------N~~i~~~~~~~i~~~~-p~~~vivv-----sNP~d~~t~~~~~~s 127 (299)
T TIGR01771 68 VVITAGAPQKPGETRLELVGR----------NVRIMKSIVPEVVKSG-FDGIFLVA-----TNPVDILTYVAWKLS 127 (299)
T ss_pred EEECCCCCCCCCCCHHHHHHH----------HHHHHHHHHHHHHHhC-CCeEEEEe-----CCHHHHHHHHHHHHh
Confidence 999999755444211111111 1234444444443322 23333332 368899999887775
|
This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases. |
| >cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Probab=94.72 E-value=0.3 Score=47.61 Aligned_cols=74 Identities=12% Similarity=0.120 Sum_probs=52.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHH---HHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPS---LHRLC 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~s---l~~~~ 86 (452)
...++|+|++|.+|+.+++.+...| .++.+++++.++.+.+ ++++ +. ...+..+.+. +.+..
T Consensus 140 ~~~vlv~g~~~~ig~~~~~~~~~~g-------~~v~~~~~~~~~~~~~-~~~g------~~-~~~~~~~~~~~~~~~~~~ 204 (323)
T cd05276 140 GETVLIHGGASGVGTAAIQLAKALG-------ARVIATAGSEEKLEAC-RALG------AD-VAINYRTEDFAEEVKEAT 204 (323)
T ss_pred CCEEEEEcCcChHHHHHHHHHHHcC-------CEEEEEcCCHHHHHHH-HHcC------CC-EEEeCCchhHHHHHHHHh
Confidence 3579999999999999999999888 7899999998887665 4442 12 2234443322 33333
Q ss_pred --cCccEEeecCCC
Q 012947 87 --SQTKLLLNCVGP 98 (452)
Q Consensus 87 --~~~dvVIn~aGp 98 (452)
.+.|++|+++|.
T Consensus 205 ~~~~~d~vi~~~g~ 218 (323)
T cd05276 205 GGRGVDVILDMVGG 218 (323)
T ss_pred CCCCeEEEEECCch
Confidence 258999999874
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding |
| >COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=94.72 E-value=0.11 Score=50.22 Aligned_cols=96 Identities=17% Similarity=0.245 Sum_probs=69.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
.++|+|+|||+= ++.+++.|...+.. ..-..+++|..+-+ ++. ...+.+---+.+.|.+.++
T Consensus 2 ~~~ilvlGGT~D-ar~la~~L~~~~~~----~~~ss~t~~g~~l~----~~~-------~~~~~~G~l~~e~l~~~l~e~ 65 (257)
T COG2099 2 MMRILLLGGTSD-ARALAKKLAAAPVD----IILSSLTGYGAKLA----EQI-------GPVRVGGFLGAEGLAAFLREE 65 (257)
T ss_pred CceEEEEeccHH-HHHHHHHhhccCcc----EEEEEcccccccch----hcc-------CCeeecCcCCHHHHHHHHHHc
Confidence 368999999986 89999999987620 01223344544333 221 2355666678899999987
Q ss_pred CccEEeecCCCCCC-CCHHHHHHHHHhCCcEEEec
Q 012947 88 QTKLLLNCVGPYRL-HGDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 88 ~~dvVIn~aGp~~~-~~~~vv~ac~~~g~~yvDls 121 (452)
++|+||...-||.. -+++.+++|.+.|+.|+-+.
T Consensus 66 ~i~llIDATHPyAa~iS~Na~~aake~gipy~r~e 100 (257)
T COG2099 66 GIDLLIDATHPYAARISQNAARAAKETGIPYLRLE 100 (257)
T ss_pred CCCEEEECCChHHHHHHHHHHHHHHHhCCcEEEEE
Confidence 68999999988864 35899999999999998764
|
|
| >TIGR03693 ocin_ThiF_like putative thiazole-containing bacteriocin maturation protein | Back alignment and domain information |
|---|
Probab=94.70 E-value=0.21 Score=53.98 Aligned_cols=101 Identities=11% Similarity=0.090 Sum_probs=71.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHH---HH---HHHhCCCCCCCccEEEEeCCCHHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVK---QA---LQWASPSHSLSIPILTADTTDPPSL 82 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~---~l---~~~l~~~~~~~v~~v~~Dl~d~~sl 82 (452)
|+-+|+|+|. |.+|..++-.|+..|..+ ++.+..++-...+. ++ .+++ ..++.+...|.++.+++
T Consensus 128 R~akVlVlG~-Gg~~s~lv~sL~~sG~~~----I~~vd~D~v~SNlnRIgEl~e~A~~~----n~~v~v~~i~~~~~~dl 198 (637)
T TIGR03693 128 RNAKILAAGS-GDFLTKLVRSLIDSGFPR----FHAIVTDAEEHALDRIHELAEIAEET----DDALLVQEIDFAEDQHL 198 (637)
T ss_pred hcccEEEEec-CchHHHHHHHHHhcCCCc----EEEEeccccchhhhHHHHHHHHHHHh----CCCCceEeccCCcchhH
Confidence 5678999997 667999999999999522 45555455443222 33 3332 34677777777888999
Q ss_pred HHHHcCccEEeecCCCCCCC-CHHHHHHHHHhCCcEE
Q 012947 83 HRLCSQTKLLLNCVGPYRLH-GDPVAAACVHSGCDYL 118 (452)
Q Consensus 83 ~~~~~~~dvVIn~aGp~~~~-~~~vv~ac~~~g~~yv 118 (452)
.+.++..|+||+.+.-+... -..+.++|++.|+.++
T Consensus 199 ~ev~~~~DiVi~vsDdy~~~~Lr~lN~acvkegk~~I 235 (637)
T TIGR03693 199 HEAFEPADWVLYVSDNGDIDDLHALHAFCKEEGKGFI 235 (637)
T ss_pred HHhhcCCcEEEEECCCCChHHHHHHHHHHHHcCCCeE
Confidence 99999999999998644322 2568899999986543
|
Members of this protein family are found in a three-gene operon in Bacillus anthracis and related Bacillus species, where the other two genes are clearly identified with maturation of a putative thiazole-containing bacteriocin precursor. While there is no detectable pairwise sequence similarity between members of this family and the proposed cyclodehydratases such as SagC of Streptococcus pyogenes (see family TIGR03603), both families show similarity through PSI-BLAST to ThiF, a protein involved in biosynthesis of the thiazole moiety for thiamine biosynthesis. This family, therefore, may contribute to cyclodehydratase function in heterocycle-containing bacteriocin biosyntheses. In Bacillus licheniformis ATCC 14580, the bacteriocin precursor gene is adjacent to the gene for this protein. |
| >PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.68 E-value=0.055 Score=54.17 Aligned_cols=40 Identities=20% Similarity=0.208 Sum_probs=34.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQAL 58 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~ 58 (452)
++|.|+| .|.+|..++..|+++| ++|.+.+|++++++...
T Consensus 3 ~~V~VIG-~G~mG~~iA~~la~~G-------~~V~v~d~~~~~~~~~~ 42 (308)
T PRK06129 3 GSVAIIG-AGLIGRAWAIVFARAG-------HEVRLWDADPAAAAAAP 42 (308)
T ss_pred cEEEEEC-ccHHHHHHHHHHHHCC-------CeeEEEeCCHHHHHHHH
Confidence 3799999 5999999999999998 79999999998776543
|
|
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=94.67 E-value=0.096 Score=48.08 Aligned_cols=66 Identities=21% Similarity=0.129 Sum_probs=48.3
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
+..+|.|+|. |-||+.+++.|...| .+|...+|+........+ . .+ . ..++++++++
T Consensus 35 ~g~tvgIiG~-G~IG~~vA~~l~~fG-------~~V~~~d~~~~~~~~~~~-~--------~~-~-----~~~l~ell~~ 91 (178)
T PF02826_consen 35 RGKTVGIIGY-GRIGRAVARRLKAFG-------MRVIGYDRSPKPEEGADE-F--------GV-E-----YVSLDELLAQ 91 (178)
T ss_dssp TTSEEEEEST-SHHHHHHHHHHHHTT--------EEEEEESSCHHHHHHHH-T--------TE-E-----ESSHHHHHHH
T ss_pred CCCEEEEEEE-cCCcCeEeeeeecCC-------ceeEEecccCChhhhccc-c--------cc-e-----eeehhhhcch
Confidence 4678999986 999999999999988 899999999876542221 1 11 1 1357888999
Q ss_pred ccEEeecCC
Q 012947 89 TKLLLNCVG 97 (452)
Q Consensus 89 ~dvVIn~aG 97 (452)
+|+|++++.
T Consensus 92 aDiv~~~~p 100 (178)
T PF02826_consen 92 ADIVSLHLP 100 (178)
T ss_dssp -SEEEE-SS
T ss_pred hhhhhhhhc
Confidence 999999884
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=94.57 E-value=0.41 Score=46.00 Aligned_cols=104 Identities=13% Similarity=0.149 Sum_probs=66.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC-------------------hhHHHHHHHHhCCCCCCCcc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASPSHSLSIP 70 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~-------------------~~kl~~l~~~l~~~~~~~v~ 70 (452)
+-.|+|+|. |++|+++++.|++.|- -++.+++-+ ..|.+-+.+.+.. -.+.++
T Consensus 30 ~~~V~VvGi-GGVGSw~veALaRsGi------g~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~-InP~c~ 101 (263)
T COG1179 30 QAHVCVVGI-GGVGSWAVEALARSGI------GRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQ-INPECE 101 (263)
T ss_pred hCcEEEEec-CchhHHHHHHHHHcCC------CeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHh-hCCCce
Confidence 456999998 7799999999999983 356655542 2233333333321 012333
Q ss_pred EEEE-eCCCHHHHHHHHc-CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecC
Q 012947 71 ILTA-DTTDPPSLHRLCS-QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISG 122 (452)
Q Consensus 71 ~v~~-Dl~d~~sl~~~~~-~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsg 122 (452)
+... |.-+++.+++++. +.|.||.|.--. .....++.-|.+++...|-..|
T Consensus 102 V~~~~~f~t~en~~~~~~~~~DyvIDaiD~v-~~Kv~Li~~c~~~ki~vIss~G 154 (263)
T COG1179 102 VTAINDFITEENLEDLLSKGFDYVIDAIDSV-RAKVALIAYCRRNKIPVISSMG 154 (263)
T ss_pred EeehHhhhCHhHHHHHhcCCCCEEEEchhhh-HHHHHHHHHHHHcCCCEEeecc
Confidence 3322 3446788888776 489999987422 2335688889988887765544
|
|
| >PRK06823 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=94.56 E-value=0.12 Score=52.02 Aligned_cols=103 Identities=14% Similarity=0.248 Sum_probs=72.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..++.|+|+ |..++.-++.+....+ .-+|.+.+|+.++.+++.+.+.. ..+.+..+ ++.+++++++
T Consensus 128 ~~~l~iiG~-G~qA~~~~~a~~~v~~-----i~~v~v~~r~~~~a~~~~~~~~~---~~~~v~~~-----~~~~~av~~A 193 (315)
T PRK06823 128 VSAIGIVGT-GIQARMQLMYLKNVTD-----CRQLWVWGRSETALEEYRQYAQA---LGFAVNTT-----LDAAEVAHAA 193 (315)
T ss_pred CCEEEEECC-cHHHHHHHHHHHhcCC-----CCEEEEECCCHHHHHHHHHHHHh---cCCcEEEE-----CCHHHHhcCC
Confidence 457888886 8999999999887653 26899999999999988877641 23444444 3478889999
Q ss_pred cEEeecCCCCCCCCHHHHH-HHHHhCCcEEEecCcHHHHHHH
Q 012947 90 KLLLNCVGPYRLHGDPVAA-ACVHSGCDYLDISGEPEFMERM 130 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~-ac~~~g~~yvDlsge~~~~~~~ 130 (452)
|+|+.|.+ ..+|+++ ..++.|+|..-+....+..+++
T Consensus 194 DIV~taT~----s~~P~~~~~~l~~G~hi~~iGs~~p~~~El 231 (315)
T PRK06823 194 NLIVTTTP----SREPLLQAEDIQPGTHITAVGADSPGKQEL 231 (315)
T ss_pred CEEEEecC----CCCceeCHHHcCCCcEEEecCCCCcccccC
Confidence 99998764 2245553 3556788866665544444443
|
|
| >TIGR00243 Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase | Back alignment and domain information |
|---|
Probab=94.54 E-value=0.61 Score=47.94 Aligned_cols=124 Identities=15% Similarity=0.182 Sum_probs=71.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEE--EEecChhHHHHHHHHhCCCCCCCccEEEEeC------------
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLA--LAGRNPTRVKQALQWASPSHSLSIPILTADT------------ 76 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~--iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl------------ 76 (452)
.+|+|+|+||-||+...+-+.++.+ . ++|. .+++|.+++.+...++.. +. ++..|-
T Consensus 2 k~i~IlGsTGSIG~qtL~Vi~~~~~-~----f~v~~Laa~~n~~~L~~q~~~f~p----~~-v~i~d~~~~~~l~~~l~~ 71 (389)
T TIGR00243 2 KQIVILGSTGSIGKSTLDVVRHNPD-H----FQVVALSAGKNVALMVEQILEFRP----KF-VAIDDEASLKDLKTMLQQ 71 (389)
T ss_pred ceEEEEecChHHHHHHHHHHHhCcc-c----cEEEEEEcCCCHHHHHHHHHHcCC----CE-EEEcCHHHHHHHHHHhhc
Confidence 3799999999999999998776542 1 5543 356888899888888742 11 111221
Q ss_pred --------CCHHHHHHHHc--CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEE
Q 012947 77 --------TDPPSLHRLCS--QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLV 146 (452)
Q Consensus 77 --------~d~~sl~~~~~--~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv 146 (452)
..++.+.+++. .+|+|++..-- ..|..-.-++++.|....=.+=|...+.- +.....+++.++.|+
T Consensus 72 ~~~~~~v~~G~~~l~~l~~~~~~D~vv~AivG--~aGL~pt~~Ai~~gk~iaLANKEsLV~aG--~li~~~a~~~~~~I~ 147 (389)
T TIGR00243 72 QGSRTEVLVGEEGICEMAALEDVDQVMNAIVG--AAGLLPTLAAIRAGKTIALANKESLVTAG--HLFLDAVKKYGVQLL 147 (389)
T ss_pred CCCCcEEEECHHHHHHHHcCCCCCEEEEhhhc--HhhHHHHHHHHHCCCcEEEechhHHHhhH--HHHHHHHHHcCCeEE
Confidence 13345555555 46999987522 23334444555666554333333333222 112345566777776
Q ss_pred cC
Q 012947 147 SA 148 (452)
Q Consensus 147 ~~ 148 (452)
+-
T Consensus 148 PV 149 (389)
T TIGR00243 148 PV 149 (389)
T ss_pred ee
Confidence 43
|
1-deoxy-D-xylulose 5-phosphate is converted to 2-C-methyl-D-erythritol 4-phosphate in the presence of NADPH. It is involved in the synthesis of isopentenyl diphosphate (IPP), a basic building block in isoprenoid, thiamin, and pyridoxal biosynthesis. |
| >PRK07502 cyclohexadienyl dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.54 E-value=0.27 Score=49.13 Aligned_cols=93 Identities=22% Similarity=0.204 Sum_probs=59.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
.+|.|+| .|.+|..++..|.+.+. ..+|.+.+|++++++.+.+ .+ +.... .. +..+.++++|
T Consensus 7 ~~I~IIG-~G~mG~sla~~l~~~g~-----~~~V~~~dr~~~~~~~a~~-~g------~~~~~--~~---~~~~~~~~aD 68 (307)
T PRK07502 7 DRVALIG-IGLIGSSLARAIRRLGL-----AGEIVGADRSAETRARARE-LG------LGDRV--TT---SAAEAVKGAD 68 (307)
T ss_pred cEEEEEe-eCHHHHHHHHHHHhcCC-----CcEEEEEECCHHHHHHHHh-CC------CCcee--cC---CHHHHhcCCC
Confidence 4799998 59999999999998872 1489999999988765543 21 11111 11 2345678999
Q ss_pred EEeecCCCCCCCCHHHHHHH---HHhCCcEEEecCc
Q 012947 91 LLLNCVGPYRLHGDPVAAAC---VHSGCDYLDISGE 123 (452)
Q Consensus 91 vVIn~aGp~~~~~~~vv~ac---~~~g~~yvDlsge 123 (452)
+||.|+.+... ..+++.. ...++..+|+++.
T Consensus 69 vViiavp~~~~--~~v~~~l~~~l~~~~iv~dvgs~ 102 (307)
T PRK07502 69 LVILCVPVGAS--GAVAAEIAPHLKPGAIVTDVGSV 102 (307)
T ss_pred EEEECCCHHHH--HHHHHHHHhhCCCCCEEEeCccc
Confidence 99999965321 2233322 2345567777654
|
|
| >PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=94.52 E-value=0.11 Score=47.21 Aligned_cols=73 Identities=15% Similarity=0.215 Sum_probs=51.5
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEe-------------
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTAD------------- 75 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~D------------- 75 (452)
++.+|+|+|+ |-+|+..++-+...| ++|.+.+.+.+++++... . ....+..+
T Consensus 19 ~p~~vvv~G~-G~vg~gA~~~~~~lG-------a~v~~~d~~~~~~~~~~~-~------~~~~i~~~~~~~~~~~~~~~~ 83 (168)
T PF01262_consen 19 PPAKVVVTGA-GRVGQGAAEIAKGLG-------AEVVVPDERPERLRQLES-L------GAYFIEVDYEDHLERKDFDKA 83 (168)
T ss_dssp -T-EEEEEST-SHHHHHHHHHHHHTT--------EEEEEESSHHHHHHHHH-T------TTEESEETTTTTTTSB-CCHH
T ss_pred CCeEEEEECC-CHHHHHHHHHHhHCC-------CEEEeccCCHHHHHhhhc-c------cCceEEEcccccccccccchh
Confidence 5678999986 999999999999998 899999999988876543 2 12333333
Q ss_pred ------CCCHHHHHHHHcCccEEeecC
Q 012947 76 ------TTDPPSLHRLCSQTKLLLNCV 96 (452)
Q Consensus 76 ------l~d~~sl~~~~~~~dvVIn~a 96 (452)
......+.+.++.+|+||.++
T Consensus 84 ~~~~~~~~~~~~f~~~i~~~d~vI~~~ 110 (168)
T PF01262_consen 84 DYYEHPESYESNFAEFIAPADIVIGNG 110 (168)
T ss_dssp HCHHHCCHHHHHHHHHHHH-SEEEEHH
T ss_pred hhhHHHHHhHHHHHHHHhhCcEEeeec
Confidence 123456778888899999765
|
4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A .... |
| >cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1 | Back alignment and domain information |
|---|
Probab=94.52 E-value=0.19 Score=49.81 Aligned_cols=99 Identities=13% Similarity=0.171 Sum_probs=57.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh-------------------hHHHHHHHHhCCCCCCCcc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-------------------TRVKQALQWASPSHSLSIP 70 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~-------------------~kl~~l~~~l~~~~~~~v~ 70 (452)
+.+|+|.|+ |.+|..+++.|+..|. -++.+.+-+. .|.+...+.+.. ..+.+.
T Consensus 19 ~s~VLIvG~-gGLG~EiaKnLalaGV------g~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~e-LNp~V~ 90 (286)
T cd01491 19 KSNVLISGL-GGLGVEIAKNLILAGV------KSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAE-LNPYVP 90 (286)
T ss_pred cCcEEEEcC-CHHHHHHHHHHHHcCC------CeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHH-HCCCCE
Confidence 467999998 6789999999999984 4677766431 233333333321 112333
Q ss_pred EEEEeCCCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEe
Q 012947 71 ILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDI 120 (452)
Q Consensus 71 ~v~~Dl~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDl 120 (452)
+...+-. ...+.+++.|+||.|..+.. .-..+-++|.++++.+|..
T Consensus 91 V~~~~~~---~~~~~l~~fdvVV~~~~~~~-~~~~in~~c~~~~ipfI~a 136 (286)
T cd01491 91 VTVSTGP---LTTDELLKFQVVVLTDASLE-DQLKINEFCHSPGIKFISA 136 (286)
T ss_pred EEEEecc---CCHHHHhcCCEEEEecCCHH-HHHHHHHHHHHcCCEEEEE
Confidence 3322211 11245677888888865332 1134556666666655543
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1. |
| >PRK08374 homoserine dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.48 E-value=1.9 Score=43.85 Aligned_cols=139 Identities=10% Similarity=0.028 Sum_probs=75.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCC---CCCCceE-EEEEecChhH-------HHHHHHHhCCCCCCCccEEEEeCC-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNF---PSSPIKS-LALAGRNPTR-------VKQALQWASPSHSLSIPILTADTT- 77 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~---~~~~~~~-v~iagR~~~k-------l~~l~~~l~~~~~~~v~~v~~Dl~- 77 (452)
.++|.|.|- |-+|+.+++.|.++... ...-..+ +.+++|+... ++++.+.... ...+..+.-+..
T Consensus 2 ~i~VaIiG~-GnVG~~~~~~L~~~~~~l~~~~G~~l~VvaV~ds~~~~~~~~Gid~~~l~~~~~~--~~~~~~~~~~~~~ 78 (336)
T PRK08374 2 EVKVSIFGF-GNVGRAVAEVLAEKSRVFKERYGVELKVVSITDTSGTIWLPEDIDLREAKEVKEN--FGKLSNWGNDYEV 78 (336)
T ss_pred eeEEEEECC-CHHHHHHHHHHHHhHHHHHHHcCCCEEEEEEEeCCccccCCCCCChHHHHHhhhc--cCchhhccccccc
Confidence 368999995 99999999998773210 0000144 4455654221 1222221110 111111110000
Q ss_pred CHHHHHHHH--cCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCC-cc
Q 012947 78 DPPSLHRLC--SQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFD-SI 154 (452)
Q Consensus 78 d~~sl~~~~--~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~-s~ 154 (452)
...+..+++ ..+|+||++.++- ....+...|+++|.|.|-.+-. ... .....+.+.|+++++.+....++. ++
T Consensus 79 ~~~~~~ell~~~~~DVvVd~t~~~--~a~~~~~~al~~G~~VVtanK~-~la-~~~~el~~la~~~~~~~~~ea~v~~Gi 154 (336)
T PRK08374 79 YNFSPEEIVEEIDADIVVDVTNDK--NAHEWHLEALKEGKSVVTSNKP-PIA-FHYDELLDLANERNLPYLFEATVMAGT 154 (336)
T ss_pred cCCCHHHHHhcCCCCEEEECCCcH--HHHHHHHHHHhhCCcEEECCHH-HHH-hCHHHHHHHHHHcCCeEEEeccccccC
Confidence 001344555 3689999999653 3367888999999998855421 111 222455677888999888555554 55
Q ss_pred h
Q 012947 155 P 155 (452)
Q Consensus 155 P 155 (452)
|
T Consensus 155 P 155 (336)
T PRK08374 155 P 155 (336)
T ss_pred C
Confidence 5
|
|
| >COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.45 E-value=0.12 Score=51.35 Aligned_cols=72 Identities=19% Similarity=0.313 Sum_probs=60.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
+-+++|+|+ |.+|...++-...-+ .+|++.++|.++++++-+.+. .++..+ .+++..+++.+.++
T Consensus 168 ~~kv~iiGG-GvvgtnaAkiA~glg-------A~Vtild~n~~rl~~ldd~f~----~rv~~~---~st~~~iee~v~~a 232 (371)
T COG0686 168 PAKVVVLGG-GVVGTNAAKIAIGLG-------ADVTILDLNIDRLRQLDDLFG----GRVHTL---YSTPSNIEEAVKKA 232 (371)
T ss_pred CccEEEECC-ccccchHHHHHhccC-------CeeEEEecCHHHHhhhhHhhC----ceeEEE---EcCHHHHHHHhhhc
Confidence 457999998 999999999988877 899999999999988877653 333333 56889999999999
Q ss_pred cEEeecC
Q 012947 90 KLLLNCV 96 (452)
Q Consensus 90 dvVIn~a 96 (452)
|+||+.+
T Consensus 233 DlvIgaV 239 (371)
T COG0686 233 DLVIGAV 239 (371)
T ss_pred cEEEEEE
Confidence 9999986
|
|
| >PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.42 E-value=0.036 Score=54.91 Aligned_cols=78 Identities=14% Similarity=0.127 Sum_probs=52.0
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC---C--CCCCccE-----EEEeCCCHHH
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP---S--HSLSIPI-----LTADTTDPPS 81 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~---~--~~~~v~~-----v~~Dl~d~~s 81 (452)
+|.|+|+ |.+|..++..|++.| ++|.+.+|++++++++.+.+.. . ....+.- ....+.-..+
T Consensus 3 ~V~VIG~-G~mG~~iA~~la~~G-------~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~ 74 (288)
T PRK09260 3 KLVVVGA-GVMGRGIAYVFAVSG-------FQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLD 74 (288)
T ss_pred EEEEECc-cHHHHHHHHHHHhCC-------CcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCc
Confidence 6899998 999999999999998 7999999999998876543210 0 0000000 0000111134
Q ss_pred HHHHHcCccEEeecCC
Q 012947 82 LHRLCSQTKLLLNCVG 97 (452)
Q Consensus 82 l~~~~~~~dvVIn~aG 97 (452)
+.+.++++|+||-|+.
T Consensus 75 ~~~~~~~aD~Vi~avp 90 (288)
T PRK09260 75 LKAAVADADLVIEAVP 90 (288)
T ss_pred HHHhhcCCCEEEEecc
Confidence 6677889999999873
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} Length = 118 | Back alignment and structure |
|---|
Score = 72.5 bits (178), Expect = 9e-16
Identities = 19/127 (14%), Positives = 44/127 (34%), Gaps = 17/127 (13%)
Query: 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPI 71
++ ++GA G G+ + S S+ +A + + + + +
Sbjct: 7 NICVVGA-GKIGQMIAALLKT------SSNYSVTVADHDLAALAVL-------NRMGVAT 52
Query: 72 LTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERME 131
D D L + +++ P+ L +A A +G Y D++ + +
Sbjct: 53 KQVDAKDEAGLAKALGGFDAVISAA-PFFLT-PIIAKAAKAAGAHYFDLTEDVAATNAVR 110
Query: 132 ARYHEKA 138
A E +
Sbjct: 111 A-LVEDS 116
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} Length = 467 | Back alignment and structure |
|---|
Score = 60.2 bits (145), Expect = 5e-10
Identities = 22/140 (15%), Positives = 54/140 (38%), Gaps = 19/140 (13%)
Query: 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPIL 72
V++LG+ GF + V+ + ++ +A R + + +
Sbjct: 26 VLLLGS-GFVAQPVIDTLAANDDI------NVTVACRTLANAQAL------AKPSGSKAI 72
Query: 73 TADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEA 132
+ D TD +L ++ + ++++ + PY H V + + + D + S +
Sbjct: 73 SLDVTDDSALDKVLADNDVVISLI-PYTFH-PNVVKSAIRTKTDVVTSSYISPAL----R 126
Query: 133 RYHEKAVETGSLLVSACGFD 152
+ V+ G +++ G D
Sbjct: 127 ELEPEIVKAGITVMNEIGLD 146
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A Length = 450 | Back alignment and structure |
|---|
Score = 56.5 bits (135), Expect = 7e-09
Identities = 22/140 (15%), Positives = 48/140 (34%), Gaps = 19/140 (13%)
Query: 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPIL 72
V++LG+ GF + + + +A R K+ + +
Sbjct: 6 VLMLGS-GFVTRPTLDVLTDSGI-------KVTVACRTLESAKKLS-----AGVQHSTPI 52
Query: 73 TADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEA 132
+ D D +L ++ L+++ + PY H V + + + S M
Sbjct: 53 SLDVNDDAALDAEVAKHDLVISLI-PYTFHA-TVIKSAIRQKKHVVTTSYVSPAMM---- 106
Query: 133 RYHEKAVETGSLLVSACGFD 152
+ A + G +++ G D
Sbjct: 107 ELDQAAKDAGITVMNEIGLD 126
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242 | Back alignment and structure |
|---|
Score = 46.3 bits (110), Expect = 6e-06
Identities = 18/85 (21%), Positives = 31/85 (36%), Gaps = 12/85 (14%)
Query: 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPIL 72
V ILGASG TG+ +++E L+ + L GR L + ++ ++
Sbjct: 21 VFILGASGETGRVLLKEILE-----QGLFSKVTLIGRRK------LTFDEEAYK-NVNQE 68
Query: 73 TADTTDPPSLHRLCSQTKLLLNCVG 97
D + C+G
Sbjct: 69 VVDFEKLDDYASAFQGHDVGFCCLG 93
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221 | Back alignment and structure |
|---|
Score = 43.5 bits (102), Expect = 4e-05
Identities = 12/106 (11%), Positives = 29/106 (27%), Gaps = 10/106 (9%)
Query: 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPIL 72
+ ILGA+G + + L + + L GR + ++
Sbjct: 8 ITILGAAGQIAQXLTATLLTYTDMH------ITLYGRQLKTRIPPEIIDHE----RVTVI 57
Query: 73 TADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYL 118
+P L + + +++ + A +
Sbjct: 58 EGSFQNPGXLEQAVTNAEVVFVGAMESGSDMASIVKALSRXNIRRV 103
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321 | Back alignment and structure |
|---|
Score = 43.4 bits (102), Expect = 9e-05
Identities = 25/154 (16%), Positives = 58/154 (37%), Gaps = 20/154 (12%)
Query: 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPIL 72
+II G +G+ GK++VR +L + P+ P+ V+ ++ S + I+
Sbjct: 7 IIIYGGTGYIGKFMVRASLSF-SHPTFIYARPLTPDSTPSSVQLREEFRSM----GVTII 61
Query: 73 TADTTDPPSLHRLCSQTKLLLNCVGPYRLHG-DPVAAACVHS-----------GCDYLDI 120
+ + + + Q ++++ + + + A + GC+ I
Sbjct: 62 EGEMEEHEKMVSVLKQVDIVISALPFPMISSQIHIINAIKAAGNIKRFLPSDFGCEEDRI 121
Query: 121 SGEPEFMERMEARYH-EKAVETGSL--LVSACGF 151
P F +E + +A+E +L +
Sbjct: 122 KPLPPFESVLEKKRIIRRAIEAAALPYTYVSANC 155
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307 | Back alignment and structure |
|---|
Score = 41.0 bits (96), Expect = 5e-04
Identities = 20/112 (17%), Positives = 42/112 (37%), Gaps = 5/112 (4%)
Query: 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPIL 72
++ILG +G G+++V ++K +P +L + + SL + +L
Sbjct: 5 ILILGPTGAIGRHIVWASIKA----GNPTYALVRKTITAANPETKEELIDNYQSLGVILL 60
Query: 73 TADTTDPPSLHRLCSQTKLLLNCVGPYRLHG-DPVAAACVHSGCDYLDISGE 123
D D +L + Q +++ G + + A +G E
Sbjct: 61 EGDINDHETLVKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFFPSE 112
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308 | Back alignment and structure |
|---|
Score = 40.3 bits (94), Expect = 7e-04
Identities = 18/104 (17%), Positives = 43/104 (41%), Gaps = 6/104 (5%)
Query: 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPIL 72
++++GA+G+ G++V + +L L P+ + + A N + + + + I+
Sbjct: 7 ILLIGATGYIGRHVAKASLDL-GHPTFLLVRESTASSNSEKAQLLESFKAS----GANIV 61
Query: 73 TADTTDPPSLHRLCSQTKLLLNCVGPYRLHG-DPVAAACVHSGC 115
D SL ++++ VG ++ + A G
Sbjct: 62 HGSIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGT 105
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 452 | |||
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 99.89 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 99.75 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 99.55 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 99.46 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 99.36 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 99.35 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 99.32 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.32 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.31 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.31 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.3 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 99.3 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.29 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.29 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.29 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.28 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.27 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.27 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.27 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.27 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.27 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.26 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.26 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.26 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.25 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.25 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.25 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.25 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.25 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.25 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.25 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.25 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 99.24 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.24 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.24 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.24 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.23 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.23 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 99.23 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.23 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.23 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.23 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.23 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.23 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.23 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.23 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.23 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.23 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.23 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.22 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.22 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.22 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.22 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.22 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 99.22 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.22 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.22 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.22 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.21 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.21 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.21 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.21 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.2 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.2 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.2 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.2 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.2 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.2 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 99.2 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.2 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.2 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.2 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.19 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.19 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.19 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.19 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.19 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.19 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.19 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.19 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.19 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.19 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.19 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.19 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.19 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.18 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.18 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.18 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.18 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.18 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.18 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.18 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.18 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.18 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.18 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.18 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.18 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.17 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.17 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.17 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.17 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.17 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.17 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.17 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.17 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.17 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.17 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.17 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.16 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.16 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.16 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.16 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.16 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.16 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.16 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.16 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.16 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.16 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.15 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.15 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.15 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.15 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.15 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.15 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.15 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.15 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.15 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 99.15 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.15 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.15 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.15 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.15 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.14 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.14 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 99.14 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.14 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.14 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.14 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.13 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.13 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.13 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.12 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.12 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.12 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.12 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.12 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.12 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.12 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.12 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.12 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.11 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.11 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.11 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.11 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.11 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.11 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.1 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 99.1 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.09 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.09 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.09 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 99.09 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.09 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.09 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.09 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.08 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.08 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 99.08 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.08 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.07 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.07 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 99.07 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.07 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.07 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.07 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 99.07 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.07 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.07 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.07 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.07 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.06 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.06 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.06 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.06 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.06 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.06 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 99.05 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.05 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 99.05 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.05 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 99.05 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 99.05 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.05 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.05 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.04 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.04 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 99.04 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.04 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.04 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.04 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.04 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.03 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.03 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.03 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.03 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.02 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 99.02 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.02 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.02 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.02 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.02 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.01 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.01 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 99.0 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.0 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 98.99 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 98.98 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 98.98 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 98.98 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 98.98 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 98.98 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 98.97 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 98.96 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 98.96 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 98.96 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 98.96 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 98.95 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 98.95 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 98.95 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 98.95 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 98.94 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 98.94 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 98.94 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 98.94 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 98.94 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 98.94 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 98.93 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 98.93 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 98.93 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 98.93 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 98.93 | |
| 2ph5_A | 480 | Homospermidine synthase; alpha-beta protein, struc | 98.93 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 98.92 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 98.92 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 98.92 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 98.92 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 98.91 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 98.91 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 98.91 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 98.91 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 98.91 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 98.9 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 98.9 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 98.9 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 98.9 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 98.89 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 98.89 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 98.89 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 98.88 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 98.88 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 98.87 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 98.87 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 98.87 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 98.87 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 98.86 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 98.86 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 98.84 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 98.83 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 98.83 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 98.83 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 98.81 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 98.8 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 98.8 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 98.78 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 98.78 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 98.78 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 98.78 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 98.77 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 98.76 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 98.76 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 98.75 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 98.74 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 98.74 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 98.73 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 98.73 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 98.73 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 98.73 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 98.72 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 98.72 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 98.71 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 98.71 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 98.7 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 98.67 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 98.66 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 98.66 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 98.66 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 98.65 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 98.64 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 98.63 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 98.6 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 98.59 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 98.56 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 98.56 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 98.55 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 98.53 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 98.51 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 98.48 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 98.48 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 98.46 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 98.42 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 98.41 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 98.36 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 98.35 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 98.34 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 98.34 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 98.32 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 98.3 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 98.28 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 98.26 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 98.25 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 98.24 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 98.2 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 98.18 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 98.17 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 98.16 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 98.15 | |
| 1dih_A | 273 | Dihydrodipicolinate reductase; oxidoreductase; HET | 98.1 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 98.06 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 98.04 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 98.04 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 98.03 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 97.98 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 97.98 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 97.98 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 97.98 | |
| 1p77_A | 272 | Shikimate 5-dehydrogenase; NADPH, oxidoreductase; | 97.97 | |
| 3ijp_A | 288 | DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, | 97.95 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 97.94 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 97.93 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 97.93 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 97.89 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 97.85 | |
| 4f3y_A | 272 | DHPR, dihydrodipicolinate reductase; structural ge | 97.85 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 97.77 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 97.77 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 97.77 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 97.76 | |
| 3phh_A | 269 | Shikimate dehydrogenase; shikimate pathway, helico | 97.75 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 97.74 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 97.71 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 97.71 | |
| 3h8v_A | 292 | Ubiquitin-like modifier-activating enzyme 5; rossm | 97.7 | |
| 3fbt_A | 282 | Chorismate mutase and shikimate 5-dehydrogenase fu | 97.69 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 97.64 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 97.56 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 97.54 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 97.53 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 97.52 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 97.5 | |
| 1xyg_A | 359 | Putative N-acetyl-gamma-glutamyl-phosphate reduct; | 97.48 | |
| 2hk9_A | 275 | Shikimate dehydrogenase; shikimate pathway, drug d | 97.48 | |
| 1npy_A | 271 | Hypothetical shikimate 5-dehydrogenase-like protei | 97.47 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 97.46 | |
| 1nvt_A | 287 | Shikimate 5'-dehydrogenase; structural genomics, P | 97.46 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 97.44 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 97.42 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 97.42 | |
| 3bio_A | 304 | Oxidoreductase, GFO/IDH/MOCA family; structural ge | 97.41 | |
| 2nqt_A | 352 | N-acetyl-gamma-glutamyl-phosphate reductase; apopr | 97.41 | |
| 1p9l_A | 245 | Dihydrodipicolinate reductase; oxidoreductase, lys | 97.4 | |
| 2ozp_A | 345 | N-acetyl-gamma-glutamyl-phosphate reductase; amino | 97.4 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 97.4 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 97.38 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 97.37 | |
| 1zud_1 | 251 | Adenylyltransferase THIF; thiamin, thiazole, prote | 97.37 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 97.37 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 97.35 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 97.33 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 97.32 | |
| 1r0k_A | 388 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; N | 97.3 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 97.27 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 97.26 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 97.25 | |
| 2o7s_A | 523 | DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat | 97.24 | |
| 2d5c_A | 263 | AROE, shikimate 5-dehydrogenase; substrate, dimer, | 97.23 | |
| 3euw_A | 344 | MYO-inositol dehydrogenase; protein structure init | 97.22 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 97.21 | |
| 3tum_A | 269 | Shikimate dehydrogenase family protein; rossmann-f | 97.21 | |
| 3h5n_A | 353 | MCCB protein; ubiquitin-activating enzyme, microci | 97.21 | |
| 2ep5_A | 350 | 350AA long hypothetical aspartate-semialdehyde deh | 97.21 | |
| 3pqe_A | 326 | L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas | 97.2 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 97.16 | |
| 3rui_A | 340 | Ubiquitin-like modifier-activating enzyme ATG7; au | 97.15 | |
| 2vns_A | 215 | Metalloreductase steap3; metal-binding, transmembr | 97.13 | |
| 3q2i_A | 354 | Dehydrogenase; rossmann fold, UDP-sugar binding, N | 97.1 | |
| 2dc1_A | 236 | L-aspartate dehydrogenase; NAD, oxidoreductase; HE | 97.1 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 97.09 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 97.09 | |
| 1ys4_A | 354 | Aspartate-semialdehyde dehydrogenase; oxidoreducta | 97.09 | |
| 3vku_A | 326 | L-LDH, L-lactate dehydrogenase; rossmann fold, NAD | 97.09 | |
| 3cea_A | 346 | MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore | 97.09 | |
| 3dr3_A | 337 | N-acetyl-gamma-glutamyl-phosphate reductase; csgid | 97.09 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 97.08 | |
| 3oqb_A | 383 | Oxidoreductase; structural genomics, protein struc | 97.08 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 97.07 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 97.05 | |
| 3db2_A | 354 | Putative NADPH-dependent oxidoreductase; two domai | 97.03 | |
| 1ydw_A | 362 | AX110P-like protein; structural genomics, protein | 97.03 | |
| 3uuw_A | 308 | Putative oxidoreductase with NAD(P)-binding rossm | 97.03 | |
| 3rc1_A | 350 | Sugar 3-ketoreductase; sugar biosynthesis, TDP bin | 97.02 | |
| 1pzg_A | 331 | LDH, lactate dehydrogenase; apicomplexa, APAD, tet | 97.02 | |
| 4gsl_A | 615 | Ubiquitin-like modifier-activating enzyme ATG7; ub | 97.0 | |
| 1tlt_A | 319 | Putative oxidoreductase (virulence factor MVIM HO; | 97.0 | |
| 4hkt_A | 331 | Inositol 2-dehydrogenase; structural genomics, nys | 96.99 | |
| 1y6j_A | 318 | L-lactate dehydrogenase; southeast collaboratory f | 96.99 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 96.99 | |
| 2ho3_A | 325 | Oxidoreductase, GFO/IDH/MOCA family; streptococcus | 96.98 | |
| 4dpl_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 96.98 | |
| 4dpk_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 96.98 | |
| 3upl_A | 446 | Oxidoreductase; rossmann fold, NADPH binding; 1.50 | 96.95 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 96.94 | |
| 3e9m_A | 330 | Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, | 96.94 | |
| 1ez4_A | 318 | Lactate dehydrogenase; rossmann fold, oxidoreducta | 96.93 | |
| 3vh1_A | 598 | Ubiquitin-like modifier-activating enzyme ATG7; au | 96.91 | |
| 2zqz_A | 326 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ro | 96.9 | |
| 1oju_A | 294 | MDH, malate dehydrogenase; hyperthermophilic, oxid | 96.9 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 96.88 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 96.87 | |
| 3d0o_A | 317 | L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly | 96.86 | |
| 1ldn_A | 316 | L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA | 96.85 | |
| 1lnq_A | 336 | MTHK channels, potassium channel related protein; | 96.85 | |
| 3cky_A | 301 | 2-hydroxymethyl glutarate dehydrogenase; rossmann | 96.85 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 96.83 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 96.8 | |
| 3g0o_A | 303 | 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine | 96.8 | |
| 3p7m_A | 321 | Malate dehydrogenase; putative dehydrogenase, enzy | 96.78 | |
| 2glx_A | 332 | 1,5-anhydro-D-fructose reductase; NADP(H) dependen | 96.77 | |
| 4e21_A | 358 | 6-phosphogluconate dehydrogenase (decarboxylating; | 96.76 | |
| 1t2d_A | 322 | LDH-P, L-lactate dehydrogenase; ternary complex, o | 96.75 | |
| 1zh8_A | 340 | Oxidoreductase; TM0312, structural genomics, JO ce | 96.73 | |
| 2ahr_A | 259 | Putative pyrroline carboxylate reductase; pyrrolin | 96.72 | |
| 2hjs_A | 340 | USG-1 protein homolog; aspartate-semialdehyde dehy | 96.71 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 96.7 | |
| 3d1l_A | 266 | Putative NADP oxidoreductase BF3122; structural ge | 96.7 | |
| 3a06_A | 376 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; M | 96.7 | |
| 2nu8_A | 288 | Succinyl-COA ligase [ADP-forming] subunit alpha; c | 96.68 | |
| 3gvi_A | 324 | Malate dehydrogenase; NAD, oxidoreductase, tricarb | 96.68 | |
| 2v6b_A | 304 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ra | 96.66 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 96.66 | |
| 1vpd_A | 299 | Tartronate semialdehyde reductase; structural geno | 96.64 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 96.64 | |
| 2xxj_A | 310 | L-LDH, L-lactate dehydrogenase; oxidoreductase, hy | 96.61 | |
| 7mdh_A | 375 | Protein (malate dehydrogenase); chloroplastic mala | 96.6 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 96.58 | |
| 3qha_A | 296 | Putative oxidoreductase; seattle structural genomi | 96.58 | |
| 3btv_A | 438 | Galactose/lactose metabolism regulatory protein GA | 96.58 | |
| 2i99_A | 312 | MU-crystallin homolog; thyroid hormine binding pro | 96.58 | |
| 1bg6_A | 359 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L | 96.57 | |
| 3c24_A | 286 | Putative oxidoreductase; YP_511008.1, structural g | 96.56 | |
| 3c1a_A | 315 | Putative oxidoreductase; ZP_00056571.1, oxidoreduc | 96.55 | |
| 4aj2_A | 331 | L-lactate dehydrogenase A chain; oxidoreductase-in | 96.55 | |
| 3l6d_A | 306 | Putative oxidoreductase; structural genomics, prot | 96.55 | |
| 3doj_A | 310 | AT3G25530, dehydrogenase-like protein; gamma-hydro | 96.55 | |
| 4h7p_A | 345 | Malate dehydrogenase; ssgcid, structural G seattle | 96.54 | |
| 3qy9_A | 243 | DHPR, dihydrodipicolinate reductase; rossmann fold | 96.51 | |
| 1f06_A | 320 | MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH | 96.49 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 96.49 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 96.49 | |
| 1ur5_A | 309 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 96.47 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 96.45 | |
| 2r00_A | 336 | Aspartate-semialdehyde dehydrogenase; conformation | 96.44 | |
| 3ezy_A | 344 | Dehydrogenase; structural genomics, unknown functi | 96.44 | |
| 3nep_X | 314 | Malate dehydrogenase; halophIle, molecular adpatat | 96.42 | |
| 3pwk_A | 366 | Aspartate-semialdehyde dehydrogenase; NADP binding | 96.42 | |
| 3gxh_A | 157 | Putative phosphatase (DUF442); YP_001181608.1, str | 96.42 | |
| 3dtt_A | 245 | NADP oxidoreductase; structural genomics, joint ce | 96.41 | |
| 3ldh_A | 330 | Lactate dehydrogenase; oxidoreductase, CHOH donor, | 96.41 | |
| 1h6d_A | 433 | Precursor form of glucose-fructose oxidoreductase; | 96.39 | |
| 2h78_A | 302 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 | 96.38 | |
| 2ewd_A | 317 | Lactate dehydrogenase,; protein-substrate_cofactor | 96.37 | |
| 3tl2_A | 315 | Malate dehydrogenase; center for structural genomi | 96.35 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 96.32 | |
| 3pdu_A | 287 | 3-hydroxyisobutyrate dehydrogenase family protein; | 96.31 | |
| 1xea_A | 323 | Oxidoreductase, GFO/IDH/MOCA family; structural ge | 96.3 | |
| 3uw3_A | 377 | Aspartate-semialdehyde dehydrogenase; structural g | 96.26 | |
| 3hhp_A | 312 | Malate dehydrogenase; MDH, citric acid cycle, TCA | 96.26 | |
| 3obb_A | 300 | Probable 3-hydroxyisobutyrate dehydrogenase; struc | 96.26 | |
| 2uyy_A | 316 | N-PAC protein; long-chain dehydrogenase, cytokine; | 96.25 | |
| 3evn_A | 329 | Oxidoreductase, GFO/IDH/MOCA family; structural ge | 96.23 | |
| 2gf2_A | 296 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct | 96.22 | |
| 3mz0_A | 344 | Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; | 96.22 | |
| 2hjr_A | 328 | Malate dehydrogenase; malaria, structural genomics | 96.21 | |
| 2d4a_B | 308 | Malate dehydrogenase; archaea, hyperthermophIle, o | 96.19 | |
| 1y8q_A | 346 | Ubiquitin-like 1 activating enzyme E1A; SUMO, hete | 96.19 | |
| 3v5n_A | 417 | Oxidoreductase; structural genomics, PSI-biology, | 96.18 | |
| 3qsg_A | 312 | NAD-binding phosphogluconate dehydrogenase-like P; | 96.18 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 96.16 | |
| 1b7g_O | 340 | Protein (glyceraldehyde 3-phosphate dehydrogenase; | 96.16 | |
| 3moi_A | 387 | Probable dehydrogenase; structural genomics, PSI2, | 96.16 | |
| 3mtj_A | 444 | Homoserine dehydrogenase; rossmann-fold, PSI, MCSG | 96.15 |
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.9e-22 Score=202.41 Aligned_cols=139 Identities=17% Similarity=0.178 Sum_probs=121.0
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 012947 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 7 ~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
..|+|+|+|+|| |++|+.++++|.+. .+|.+++|+.++++++.+ .+..+.+|++|.+++.+++
T Consensus 13 ~g~~mkilvlGa-G~vG~~~~~~L~~~--------~~v~~~~~~~~~~~~~~~--------~~~~~~~d~~d~~~l~~~~ 75 (365)
T 3abi_A 13 EGRHMKVLILGA-GNIGRAIAWDLKDE--------FDVYIGDVNNENLEKVKE--------FATPLKVDASNFDKLVEVM 75 (365)
T ss_dssp ---CCEEEEECC-SHHHHHHHHHHTTT--------SEEEEEESCHHHHHHHTT--------TSEEEECCTTCHHHHHHHH
T ss_pred cCCccEEEEECC-CHHHHHHHHHHhcC--------CCeEEEEcCHHHHHHHhc--------cCCcEEEecCCHHHHHHHH
Confidence 347899999999 99999999999754 589999999999876532 4567889999999999999
Q ss_pred cCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhh
Q 012947 87 SQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQ 166 (452)
Q Consensus 87 ~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~ 166 (452)
+++|+||||++|+. +.+++++|+++|+||||++++..++.. +++.|+++|+.++++||+++..+++.+..+.++
T Consensus 76 ~~~DvVi~~~p~~~--~~~v~~~~~~~g~~yvD~s~~~~~~~~----l~~~a~~~g~~~i~~~G~~PG~~~~~a~~~~~~ 149 (365)
T 3abi_A 76 KEFELVIGALPGFL--GFKSIKAAIKSKVDMVDVSFMPENPLE----LRDEAEKAQVTIVFDAGFAPGLSNILMGRIFQE 149 (365)
T ss_dssp TTCSEEEECCCGGG--HHHHHHHHHHHTCEEEECCCCSSCGGG----GHHHHHHTTCEEECCCBTTTBHHHHHHHHHHHH
T ss_pred hCCCEEEEecCCcc--cchHHHHHHhcCcceEeeeccchhhhh----hhhhhccCCceeeecCCCCCchHHHHHHHHHHh
Confidence 99999999998873 479999999999999999998876544 588999999999999999999999999988888
Q ss_pred cC
Q 012947 167 WI 168 (452)
Q Consensus 167 ~~ 168 (452)
++
T Consensus 150 ~~ 151 (365)
T 3abi_A 150 LD 151 (365)
T ss_dssp SC
T ss_pred cc
Confidence 85
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=99.75 E-value=6.2e-17 Score=166.41 Aligned_cols=158 Identities=21% Similarity=0.307 Sum_probs=126.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~-- 88 (452)
++|+|+|| |++|+.+++.|++++.. ..+|++++|+.++++++.+++......++..+.+|++|.+++++++++
T Consensus 2 ~kVlIiGa-GgiG~~ia~~L~~~g~~----~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~ 76 (405)
T 4ina_A 2 AKVLQIGA-GGVGGVVAHKMAMNREV----FSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVK 76 (405)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTCTTT----CCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCC----ceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhC
Confidence 47999999 89999999999998720 028999999999999988876311113578899999999999999997
Q ss_pred ccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHH-----HHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHH
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEF-----MERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFN 163 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~-----~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~ 163 (452)
+|+||||+||+. ..+++++|+++|+||+|+++.... .......+++.|+++|+.++++||+++.++++.+..+
T Consensus 77 ~DvVin~ag~~~--~~~v~~a~l~~g~~vvD~a~~~~~~~~~~~~~~~~~l~~~a~~aG~~~i~g~G~~PG~~~l~a~~~ 154 (405)
T 4ina_A 77 PQIVLNIALPYQ--DLTIMEACLRTGVPYLDTANYEHPDLAKFEYKEQWAFHDRYKEKGVMALLGSGFDPGVTNVFCAYA 154 (405)
T ss_dssp CSEEEECSCGGG--HHHHHHHHHHHTCCEEESSCCBCTTCSCBCSHHHHTTHHHHHHHTCEEEECCBTTTBHHHHHHHHH
T ss_pred CCEEEECCCccc--ChHHHHHHHHhCCCEEEecCCCCcccchhhhHHHHHHHHHHHHhCCEEEEcCCCCccHHHHHHHHH
Confidence 899999999875 378999999999999998764221 1122246788899999999999999999999998888
Q ss_pred hhh-cCCCCCcceEEE
Q 012947 164 SRQ-WIPPAVPNQIEA 178 (452)
Q Consensus 164 ~~~-~~~~~~~~~~~~ 178 (452)
.++ +. ..+.++.
T Consensus 155 ~~~~~~---~i~~i~i 167 (405)
T 4ina_A 155 QKHYFD---EIHEIDI 167 (405)
T ss_dssp HHHTCS---EEEEEEE
T ss_pred HHhccC---cccEEEE
Confidence 876 54 3455554
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=99.46 E-value=7.1e-13 Score=110.84 Aligned_cols=112 Identities=14% Similarity=0.232 Sum_probs=95.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
.++|+|+|+ |++|+.+++.|.+.+. ++|.+++|+.++++.+.. ..+.++.+|+.|.+++.++++++
T Consensus 5 ~~~v~I~G~-G~iG~~~~~~l~~~g~------~~v~~~~r~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~ 70 (118)
T 3ic5_A 5 RWNICVVGA-GKIGQMIAALLKTSSN------YSVTVADHDLAALAVLNR-------MGVATKQVDAKDEAGLAKALGGF 70 (118)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHCSS------EEEEEEESCHHHHHHHHT-------TTCEEEECCTTCHHHHHHHTTTC
T ss_pred cCeEEEECC-CHHHHHHHHHHHhCCC------ceEEEEeCCHHHHHHHHh-------CCCcEEEecCCCHHHHHHHHcCC
Confidence 358999999 9999999999999873 789999999999877652 35678899999999999999999
Q ss_pred cEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHH
Q 012947 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKA 138 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A 138 (452)
|+||||+|+.. ..+++++|.+.|++++|++++..+.+.+ ..+++.+
T Consensus 71 d~vi~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~a 116 (118)
T 3ic5_A 71 DAVISAAPFFL--TPIIAKAAKAAGAHYFDLTEDVAATNAV-RALVEDS 116 (118)
T ss_dssp SEEEECSCGGG--HHHHHHHHHHTTCEEECCCSCHHHHHHH-HHHHHCC
T ss_pred CEEEECCCchh--hHHHHHHHHHhCCCEEEecCcHHHHHHH-HHHHHhh
Confidence 99999996543 3789999999999999999999988776 5555443
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.36 E-value=3e-12 Score=123.28 Aligned_cols=122 Identities=12% Similarity=0.057 Sum_probs=91.3
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
+...++||||+++||+.+++.|+++| .+|++++|++++++++.+++.. ...++..+.+|++|+++++++++
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~G-------a~Vv~~~~~~~~~~~~~~~i~~-~g~~~~~~~~Dvt~~~~v~~~~~~ 77 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALND-------SIVVAVELLEDRLNQIVQELRG-MGKEVLGVKADVSKKKDVEEFVRR 77 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcC-------CEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHH
Confidence 34679999999999999999999999 8999999999999998888742 24578889999999999998876
Q ss_pred ------CccEEeecCCCCCCC------CHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEE
Q 012947 88 ------QTKLLLNCVGPYRLH------GDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLL 145 (452)
Q Consensus 88 ------~~dvVIn~aGp~~~~------~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~i 145 (452)
+.|++|||||..... .....+...+ +++.|....++..++.+.+ ++.|.+|
T Consensus 78 ~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~-----vNl~g~~~~~~~~~p~m~~--~~~G~IV 140 (254)
T 4fn4_A 78 TFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLA-----VNLYSAFYSSRAVIPIMLK--QGKGVIV 140 (254)
T ss_dssp HHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHH-----HHTHHHHHHHHHHHHHHHH--HTCEEEE
T ss_pred HHHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHH-----HHhHHHHHHHHHHHHHHHH--cCCcEEE
Confidence 579999999954322 2233333333 4566666667776655443 3345443
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.35 E-value=8.7e-12 Score=130.11 Aligned_cols=139 Identities=14% Similarity=0.172 Sum_probs=113.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+|+|+|| |++|+.+++.|++.+. .+|.+++|+.++++++.+.. ++..+.+|+.|.+++.++++++
T Consensus 23 ~k~VlIiGA-GgiG~aia~~L~~~~g------~~V~v~~R~~~ka~~la~~~------~~~~~~~D~~d~~~l~~~l~~~ 89 (467)
T 2axq_A 23 GKNVLLLGS-GFVAQPVIDTLAANDD------INVTVACRTLANAQALAKPS------GSKAISLDVTDDSALDKVLADN 89 (467)
T ss_dssp CEEEEEECC-STTHHHHHHHHHTSTT------EEEEEEESSHHHHHHHHGGG------TCEEEECCTTCHHHHHHHHHTS
T ss_pred CCEEEEECC-hHHHHHHHHHHHhCCC------CeEEEEECCHHHHHHHHHhc------CCcEEEEecCCHHHHHHHHcCC
Confidence 357999998 9999999999998842 79999999999998877541 3567789999999999999999
Q ss_pred cEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhhc
Q 012947 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQW 167 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~~ 167 (452)
|+||||+++... ..+.++|++.+++|+|++...+.. ..+.+.|++.|+.+++++|+++...++.+..+.++.
T Consensus 90 DvVIn~tp~~~~--~~v~~a~l~~g~~vvd~~~~~p~~----~~Ll~~Ak~aGv~~i~g~G~~PG~~~~~a~~li~q~ 161 (467)
T 2axq_A 90 DVVISLIPYTFH--PNVVKSAIRTKTDVVTSSYISPAL----RELEPEIVKAGITVMNEIGLDPGIDHLYAVKTIDEV 161 (467)
T ss_dssp SEEEECSCGGGH--HHHHHHHHHHTCEEEECSCCCHHH----HHHHHHHHHHTCEEECSCBBTTBHHHHHHHHHHHHH
T ss_pred CEEEECCchhhh--HHHHHHHHhcCCEEEEeecCCHHH----HHHHHHHHHcCCEEEecCCcCccchHHHHHHHHHHH
Confidence 999999986432 468899999999999998754543 344677888899999999999888777665555565
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=99.32 E-value=1.2e-11 Score=128.63 Aligned_cols=138 Identities=15% Similarity=0.130 Sum_probs=111.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
.+|+|+| +|++|+.+++.|++.+ .+|++++|+.++++++.+.+ ..+..+.+|++|.+++.++++++|
T Consensus 4 k~VlViG-aG~iG~~ia~~L~~~G-------~~V~v~~R~~~~a~~la~~~-----~~~~~~~~Dv~d~~~l~~~l~~~D 70 (450)
T 1ff9_A 4 KSVLMLG-SGFVTRPTLDVLTDSG-------IKVTVACRTLESAKKLSAGV-----QHSTPISLDVNDDAALDAEVAKHD 70 (450)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHTTT-------CEEEEEESSHHHHHHTTTTC-----TTEEEEECCTTCHHHHHHHHTTSS
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCc-------CEEEEEECCHHHHHHHHHhc-----CCceEEEeecCCHHHHHHHHcCCc
Confidence 4799998 7999999999999877 78999999999887665433 235678889999999999999999
Q ss_pred EEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhhc
Q 012947 91 LLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQW 167 (452)
Q Consensus 91 vVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~~ 167 (452)
+||||+++... ..+.++|++.|+|++|.+...+.. ..+.+.|+++|+.+++++|++..+.++.+..+.++.
T Consensus 71 vVIn~a~~~~~--~~i~~a~l~~g~~vvd~~~~~~~~----~~l~~aA~~aGv~~i~g~g~~pg~~~~~a~~li~q~ 141 (450)
T 1ff9_A 71 LVISLIPYTFH--ATVIKSAIRQKKHVVTTSYVSPAM----MELDQAAKDAGITVMNEIGLDPGIDHLYAIKTIEEV 141 (450)
T ss_dssp EEEECCC--CH--HHHHHHHHHHTCEEEESSCCCHHH----HHTHHHHHHTTCEEECSCBBTTBHHHHHHHHHHHHH
T ss_pred EEEECCccccc--hHHHHHHHhCCCeEEEeecccHHH----HHHHHHHHHCCCeEEeCCCCcCchHHHHHHHHHHHh
Confidence 99999976432 357889999999999986544433 344677888999999999999999887776666665
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.32 E-value=1.1e-11 Score=118.87 Aligned_cols=82 Identities=18% Similarity=0.186 Sum_probs=72.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||++++++|+++| ++|++.+|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 6 ~k~vlVTGas~gIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~ 77 (257)
T 3imf_A 6 EKVVIITGGSSGMGKGMATRFAKEG-------ARVVITGRTKEKLEEAKLEIEQ-FPGQILTVQMDVRNTDDIQKMIEQI 77 (257)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHCC-STTCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHH
Confidence 4579999999999999999999998 8999999999999998888853 23578889999999999998887
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
+.|+||||||..
T Consensus 78 ~~~~g~id~lv~nAg~~ 94 (257)
T 3imf_A 78 DEKFGRIDILINNAAGN 94 (257)
T ss_dssp HHHHSCCCEEEECCCCC
T ss_pred HHHcCCCCEEEECCCCC
Confidence 679999999954
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.31 E-value=9.8e-12 Score=122.28 Aligned_cols=83 Identities=13% Similarity=0.130 Sum_probs=72.3
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
....++||||+|+||++++++|+++| ++|++++|+.++++++.+++.. ...++.++.+|++|.++++++++
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dv~d~~~v~~~~~~ 101 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARRG-------ARLVLSDVDQPALEQAVNGLRG-QGFDAHGVVCDVRHLDEMVRLADE 101 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHH
Confidence 34579999999999999999999998 8999999999999888877642 23478899999999999998887
Q ss_pred ------CccEEeecCCCC
Q 012947 88 ------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (452)
+.|+||||||..
T Consensus 102 ~~~~~g~id~lvnnAg~~ 119 (301)
T 3tjr_A 102 AFRLLGGVDVVFSNAGIV 119 (301)
T ss_dssp HHHHHSSCSEEEECCCCC
T ss_pred HHHhCCCCCEEEECCCcC
Confidence 789999999965
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.31 E-value=2.6e-12 Score=123.82 Aligned_cols=85 Identities=14% Similarity=0.156 Sum_probs=73.5
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
+...++||||+|+||++++++|+++| ++|++.+|+.++++++.+++......++.++.+|++|+++++++++
T Consensus 9 ~~k~vlVTGas~gIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 81 (262)
T 3pk0_A 9 QGRSVVVTGGTKGIGRGIATVFARAG-------ANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGR 81 (262)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHH
Confidence 45689999999999999999999998 8999999999999888887743122478889999999999998887
Q ss_pred ------CccEEeecCCCCC
Q 012947 88 ------QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (452)
+.|+||||||...
T Consensus 82 ~~~~~g~id~lvnnAg~~~ 100 (262)
T 3pk0_A 82 AVEEFGGIDVVCANAGVFP 100 (262)
T ss_dssp HHHHHSCCSEEEECCCCCC
T ss_pred HHHHhCCCCEEEECCCCCC
Confidence 7899999999653
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.30 E-value=4.3e-12 Score=121.82 Aligned_cols=80 Identities=16% Similarity=0.141 Sum_probs=72.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||++++++|+++| ++|++.+|+.++++++.+++. .++.++.+|++|+++++++++
T Consensus 8 ~k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~ 76 (259)
T 4e6p_A 8 GKSALITGSARGIGRAFAEAYVREG-------ATVAIADIDIERARQAAAEIG----PAAYAVQMDVTRQDSIDAAIAAT 76 (259)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHC----TTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhC----CCceEEEeeCCCHHHHHHHHHHH
Confidence 4579999999999999999999998 899999999999999888874 467889999999999999887
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
+.|+||||||...
T Consensus 77 ~~~~g~id~lv~~Ag~~~ 94 (259)
T 4e6p_A 77 VEHAGGLDILVNNAALFD 94 (259)
T ss_dssp HHHSSSCCEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCcCC
Confidence 7899999999643
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.30 E-value=1.4e-12 Score=125.56 Aligned_cols=112 Identities=11% Similarity=0.026 Sum_probs=85.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+++||+.+++.|+++| ++|++.+|+.++++++.+++.. ...++..+.+|++|+++++++++
T Consensus 9 gKvalVTGas~GIG~aia~~la~~G-------a~Vvi~~~~~~~~~~~~~~l~~-~g~~~~~~~~Dv~~~~~v~~~~~~~ 80 (255)
T 4g81_D 9 GKTALVTGSARGLGFAYAEGLAAAG-------ARVILNDIRATLLAESVDTLTR-KGYDAHGVAFDVTDELAIEAAFSKL 80 (255)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTT-------CEEEECCSCHHHHHHHHHHHHH-TTCCEEECCCCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEeeCCCHHHHHHHHHHH
Confidence 4579999999999999999999999 8999999999999988887743 23567888999999999988876
Q ss_pred -----CccEEeecCCCCCCC-----CHHHHHHHHHhCCcEEEecCcHHHHHHHHHHH
Q 012947 88 -----QTKLLLNCVGPYRLH-----GDPVAAACVHSGCDYLDISGEPEFMERMEARY 134 (452)
Q Consensus 88 -----~~dvVIn~aGp~~~~-----~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~ 134 (452)
+.|++|||||..... .....+...+ +++.|....++..++.+
T Consensus 81 ~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~-----vNl~g~~~~~~~~~p~m 132 (255)
T 4g81_D 81 DAEGIHVDILINNAGIQYRKPMVELELENWQKVID-----TNLTSAFLVSRSAAKRM 132 (255)
T ss_dssp HHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHH-----HHTHHHHHHHHHHHHHH
T ss_pred HHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHH-----HHhHHHHHHHHHHHHHH
Confidence 579999999965432 2233333332 45556666666665544
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.29 E-value=7.6e-12 Score=116.87 Aligned_cols=75 Identities=21% Similarity=0.417 Sum_probs=66.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
.++|+|+|||||+|++++++|++++ ++|.+++|+.++++.+ ..++.++.+|++|++++.++++++
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~--------~~~~~~~~~Dl~d~~~~~~~~~~~ 68 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRG-------FEVTAVVRHPEKIKIE--------NEHLKVKKADVSSLDEVCEVCKGA 68 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTT-------CEEEEECSCGGGCCCC--------CTTEEEECCCTTCHHHHHHHHTTC
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCC-------CEEEEEEcCcccchhc--------cCceEEEEecCCCHHHHHHHhcCC
Confidence 3689999999999999999999998 8999999998875321 247889999999999999999999
Q ss_pred cEEeecCCCC
Q 012947 90 KLLLNCVGPY 99 (452)
Q Consensus 90 dvVIn~aGp~ 99 (452)
|+||||+|+.
T Consensus 69 d~vi~~a~~~ 78 (227)
T 3dhn_A 69 DAVISAFNPG 78 (227)
T ss_dssp SEEEECCCC-
T ss_pred CEEEEeCcCC
Confidence 9999999875
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.29 E-value=2.6e-12 Score=123.12 Aligned_cols=83 Identities=12% Similarity=0.109 Sum_probs=72.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||+++++.|+++| ++|++++|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 7 ~k~vlVTGas~GIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~ 78 (252)
T 3h7a_A 7 NATVAVIGAGDYIGAEIAKKFAAEG-------FTVFAGRRNGEKLAPLVAEIEA-AGGRIVARSLDARNEDEVTAFLNAA 78 (252)
T ss_dssp SCEEEEECCSSHHHHHHHHHHHHTT-------CEEEEEESSGGGGHHHHHHHHH-TTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEECcCCCHHHHHHHHHHH
Confidence 4579999999999999999999998 8999999999999888877642 13467899999999999999887
Q ss_pred ----CccEEeecCCCCC
Q 012947 88 ----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (452)
+.|+||||||...
T Consensus 79 ~~~g~id~lv~nAg~~~ 95 (252)
T 3h7a_A 79 DAHAPLEVTIFNVGANV 95 (252)
T ss_dssp HHHSCEEEEEECCCCCC
T ss_pred HhhCCceEEEECCCcCC
Confidence 6799999999654
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.29 E-value=2.5e-12 Score=124.38 Aligned_cols=83 Identities=22% Similarity=0.181 Sum_probs=71.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||+.+++.|+++| ++|++++|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 4 ~k~~lVTGas~GIG~aia~~la~~G-------~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dv~d~~~v~~~~~~~ 75 (264)
T 3tfo_A 4 DKVILITGASGGIGEGIARELGVAG-------AKILLGARRQARIEAIATEIRD-AGGTALAQVLDVTDRHSVAAFAQAA 75 (264)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTT-------CEEEEEESSHHHHHHHHHHHHH-TTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 8999999999999888877632 13467788999999999998876
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
+.|+||||||...
T Consensus 76 ~~~~g~iD~lVnnAG~~~ 93 (264)
T 3tfo_A 76 VDTWGRIDVLVNNAGVMP 93 (264)
T ss_dssp HHHHSCCCEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 6899999999653
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=3.9e-12 Score=119.99 Aligned_cols=112 Identities=13% Similarity=0.142 Sum_probs=82.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..++||||+|+||++++++|+++| ++|++.+|+.++++++.+++......++.++.+|++|+++++++++
T Consensus 3 k~vlITGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 75 (235)
T 3l77_A 3 KVAVITGASRGIGEAIARALARDG-------YALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVL 75 (235)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHH
Confidence 469999999999999999999998 8999999999998887766521113578889999999999999887
Q ss_pred ----CccEEeecCCCCCCC-----CHHHHHHHHHhCCcEEEecCcHHHHHHHHHHH
Q 012947 88 ----QTKLLLNCVGPYRLH-----GDPVAAACVHSGCDYLDISGEPEFMERMEARY 134 (452)
Q Consensus 88 ----~~dvVIn~aGp~~~~-----~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~ 134 (452)
+.|+||||||..... ...-.+...+ +++.|....++.+.+.+
T Consensus 76 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~-----~N~~g~~~l~~~~~~~~ 126 (235)
T 3l77_A 76 ERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIE-----VNLLGVWRTLKAFLDSL 126 (235)
T ss_dssp HHHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHH-----HHTHHHHHHHHHHHHHH
T ss_pred HhcCCCCEEEECCccccccCcccCCHHHHHHHHH-----HHHHHHHHHHHHHHHHH
Confidence 679999999964322 2233333333 23445555555554443
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.27 E-value=6.1e-12 Score=119.66 Aligned_cols=83 Identities=19% Similarity=0.120 Sum_probs=72.3
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 012947 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 7 ~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
..+..+++||||+|+||+++++.|+++| ++|++.+|+.++++++.+++. .++.++.+|++|.+++.+++
T Consensus 11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~ 79 (249)
T 3f9i_A 11 DLTGKTSLITGASSGIGSAIARLLHKLG-------SKVIISGSNEEKLKSLGNALK----DNYTIEVCNLANKEECSNLI 79 (249)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHC----SSEEEEECCTTSHHHHHHHH
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCC-------CEEEEEcCCHHHHHHHHHHhc----cCccEEEcCCCCHHHHHHHH
Confidence 3356789999999999999999999998 899999999999999888874 46788999999999999998
Q ss_pred c---CccEEeecCCCCC
Q 012947 87 S---QTKLLLNCVGPYR 100 (452)
Q Consensus 87 ~---~~dvVIn~aGp~~ 100 (452)
+ +.|+||||||...
T Consensus 80 ~~~~~id~li~~Ag~~~ 96 (249)
T 3f9i_A 80 SKTSNLDILVCNAGITS 96 (249)
T ss_dssp HTCSCCSEEEECCC---
T ss_pred HhcCCCCEEEECCCCCC
Confidence 8 6899999999653
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.27 E-value=6.4e-12 Score=122.19 Aligned_cols=86 Identities=16% Similarity=0.140 Sum_probs=72.1
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 012947 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 7 ~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
+.+...++||||+|+||+++++.|+++| ++|++++|+.++++++.+++.. ...++.++.+|++|++++++++
T Consensus 21 m~~~k~~lVTGas~GIG~aia~~la~~G-------~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dv~d~~~v~~~~ 92 (279)
T 3sju_A 21 MSRPQTAFVTGVSSGIGLAVARTLAARG-------IAVYGCARDAKNVSAAVDGLRA-AGHDVDGSSCDVTSTDEVHAAV 92 (279)
T ss_dssp ----CEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHT-TTCCEEEEECCTTCHHHHHHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEECCCCCHHHHHHHH
Confidence 3345679999999999999999999998 8999999999999888887742 2357889999999999998887
Q ss_pred c-------CccEEeecCCCCC
Q 012947 87 S-------QTKLLLNCVGPYR 100 (452)
Q Consensus 87 ~-------~~dvVIn~aGp~~ 100 (452)
+ +.|+||||||...
T Consensus 93 ~~~~~~~g~id~lv~nAg~~~ 113 (279)
T 3sju_A 93 AAAVERFGPIGILVNSAGRNG 113 (279)
T ss_dssp HHHHHHHCSCCEEEECCCCCC
T ss_pred HHHHHHcCCCcEEEECCCCCC
Confidence 6 6799999999653
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=4.1e-12 Score=121.79 Aligned_cols=125 Identities=15% Similarity=0.147 Sum_probs=88.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..+|||||+++||+.+++.|+++| ++|++.+|++++++++.++. .++..+.+|++|+++++++++
T Consensus 3 K~vlVTGas~GIG~aia~~la~~G-------a~V~~~~~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~v~~~~ 70 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAG-------DKVCFIDIDEKRSADFAKER-----PNLFYFHGDVADPLTLKKFVEYAM 70 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHTTC-----TTEEEEECCTTSHHHHHHHHHHHH
T ss_pred CEEEEecCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHhc-----CCEEEEEecCCCHHHHHHHHHHHH
Confidence 479999999999999999999999 89999999999998877643 467889999999999988876
Q ss_pred ----CccEEeecCCCCCCC-----CHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEE--cCCCCCcch
Q 012947 88 ----QTKLLLNCVGPYRLH-----GDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLV--SACGFDSIP 155 (452)
Q Consensus 88 ----~~dvVIn~aGp~~~~-----~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv--~~~G~~s~P 155 (452)
+.|++|||||..... .....+...+ +++.+....++...+.+. +..|.+|. |..|+.+.|
T Consensus 71 ~~~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~-----vNl~g~~~~~~~~~~~m~---~~~G~IInisS~~~~~~~~ 141 (247)
T 3ged_A 71 EKLQRIDVLVNNACRGSKGILSSLLYEEFDYILS-----VGLKAPYELSRLCRDELI---KNKGRIINIASTRAFQSEP 141 (247)
T ss_dssp HHHSCCCEEEECCCCCCCCGGGTCCHHHHHHHHH-----HHTHHHHHHHHHHHHHHH---HTTCEEEEECCGGGTSCCT
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH-----HHhHHHHHHHHHHHHHHh---hcCCcEEEEeecccccCCC
Confidence 679999999865432 2233333332 455565555565544332 33454433 333444444
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.27 E-value=2.2e-11 Score=116.66 Aligned_cols=112 Identities=13% Similarity=0.098 Sum_probs=86.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||++++++|+++| ++|++++|+.++++++.+++. .++.++.+|++|.++++++++
T Consensus 9 ~k~vlITGas~gIG~~~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~ 77 (261)
T 3n74_A 9 GKVALITGAGSGFGEGMAKRFAKGG-------AKVVIVDRDKAGAERVAGEIG----DAALAVAADISKEADVDAAVEAA 77 (261)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHC----TTEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEcCCHHHHHHHHHHhC----CceEEEEecCCCHHHHHHHHHHH
Confidence 4679999999999999999999998 899999999999999988874 478899999999999998887
Q ss_pred -----CccEEeecCCCCCCC------CHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHH
Q 012947 88 -----QTKLLLNCVGPYRLH------GDPVAAACVHSGCDYLDISGEPEFMERMEARYHEK 137 (452)
Q Consensus 88 -----~~dvVIn~aGp~~~~------~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~ 137 (452)
+.|+||||||..... ...-.+...+ +++.+....++...+.+.+.
T Consensus 78 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~-----~N~~g~~~l~~~~~~~~~~~ 133 (261)
T 3n74_A 78 LSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVG-----VNVRGVYLMTSKLIPHFKEN 133 (261)
T ss_dssp HHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHH-----HHTHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHH-----HhhHHHHHHHHHHHHHHHhc
Confidence 679999999965421 2223333333 34445555666665555443
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=1.6e-11 Score=114.57 Aligned_cols=76 Identities=16% Similarity=0.235 Sum_probs=67.3
Q ss_pred eEEEEcCCchHHHHHHHHHH-HcCCCCCCCceEEEEEecChh-HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 12 DVIILGASGFTGKYVVREAL-KLFNFPSSPIKSLALAGRNPT-RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~-~~g~~~~~~~~~v~iagR~~~-kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
+|+|+||||++|+.++++|+ +.| ++|++.+|+.+ +++++.+. ..++.++.+|++|+++++++++++
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~~g-------~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~d~~~~~~~~~~~ 74 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTYTD-------MHITLYGRQLKTRIPPEIID-----HERVTVIEGSFQNPGXLEQAVTNA 74 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCC-------CEEEEEESSHHHHSCHHHHT-----STTEEEEECCTTCHHHHHHHHTTC
T ss_pred EEEEEeCCcHHHHHHHHHHHhcCC-------ceEEEEecCccccchhhccC-----CCceEEEECCCCCHHHHHHHHcCC
Confidence 49999999999999999999 777 89999999998 87666421 357889999999999999999999
Q ss_pred cEEeecCCCC
Q 012947 90 KLLLNCVGPY 99 (452)
Q Consensus 90 dvVIn~aGp~ 99 (452)
|+||||+|+.
T Consensus 75 d~vv~~ag~~ 84 (221)
T 3r6d_A 75 EVVFVGAMES 84 (221)
T ss_dssp SEEEESCCCC
T ss_pred CEEEEcCCCC
Confidence 9999999853
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.26 E-value=4.4e-12 Score=121.77 Aligned_cols=84 Identities=14% Similarity=0.056 Sum_probs=72.5
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
+...++||||+|+||++++++|+++| ++|++.+|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~ 82 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKAG-------ASVVVTDLKSEGAEAVAAAIRQ-AGGKAIGLECNVTDEQHREAVIKA 82 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHHT-------CEEEEEESSHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEECCCCCHHHHHHHHHH
Confidence 34679999999999999999999999 8999999999998888776632 23578889999999999998887
Q ss_pred ------CccEEeecCCCCC
Q 012947 88 ------QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (452)
+.|+||||||...
T Consensus 83 ~~~~~g~id~lv~nAg~~~ 101 (256)
T 3gaf_A 83 ALDQFGKITVLVNNAGGGG 101 (256)
T ss_dssp HHHHHSCCCEEEECCCCCC
T ss_pred HHHHcCCCCEEEECCCCCC
Confidence 7899999999653
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=4.9e-12 Score=120.76 Aligned_cols=80 Identities=19% Similarity=0.153 Sum_probs=71.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||++++++|+++| ++|++.+|+.++++++.++++ .++.++.+|++|+++++++++
T Consensus 6 gk~vlVTGas~gIG~a~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~ 74 (247)
T 3rwb_A 6 GKTALVTGAAQGIGKAIAARLAADG-------ATVIVSDINAEGAKAAAASIG----KKARAIAADISDPGSVKALFAEI 74 (247)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEECSCHHHHHHHHHHHC----TTEEECCCCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhC----CceEEEEcCCCCHHHHHHHHHHH
Confidence 4579999999999999999999998 899999999999999888874 467888999999999998887
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
+.|+||||||...
T Consensus 75 ~~~~g~id~lv~nAg~~~ 92 (247)
T 3rwb_A 75 QALTGGIDILVNNASIVP 92 (247)
T ss_dssp HHHHSCCSEEEECCCCCC
T ss_pred HHHCCCCCEEEECCCCCC
Confidence 7899999999653
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.26 E-value=7.9e-12 Score=120.85 Aligned_cols=81 Identities=20% Similarity=0.245 Sum_probs=72.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
+...++||||+|+||+++++.|+++| ++|++.+|+.++++++.++++ .++.++.+|++|+++++++++
T Consensus 26 ~gk~vlVTGas~gIG~aia~~la~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~ 94 (266)
T 3grp_A 26 TGRKALVTGATGGIGEAIARCFHAQG-------AIVGLHGTREDKLKEIAADLG----KDVFVFSANLSDRKSIKQLAEV 94 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHC----SSEEEEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhC----CceEEEEeecCCHHHHHHHHHH
Confidence 34679999999999999999999998 899999999999999888774 478899999999999998887
Q ss_pred ------CccEEeecCCCCC
Q 012947 88 ------QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (452)
+.|+||||||...
T Consensus 95 ~~~~~g~iD~lvnnAg~~~ 113 (266)
T 3grp_A 95 AEREMEGIDILVNNAGITR 113 (266)
T ss_dssp HHHHHTSCCEEEECCCCC-
T ss_pred HHHHcCCCCEEEECCCCCC
Confidence 7899999999653
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.25 E-value=7.3e-12 Score=122.95 Aligned_cols=84 Identities=14% Similarity=0.146 Sum_probs=72.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||+.+++.|+++| ++|++++|+.++++++.+++......++.++.+|++|+++++++++
T Consensus 41 ~k~vlVTGas~GIG~aia~~la~~G-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 113 (293)
T 3rih_A 41 ARSVLVTGGTKGIGRGIATVFARAG-------ANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTV 113 (293)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTT-------CEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHH
Confidence 4579999999999999999999998 8999999999999998888853222467889999999999988876
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
+.|+||||||...
T Consensus 114 ~~~~g~iD~lvnnAg~~~ 131 (293)
T 3rih_A 114 VDAFGALDVVCANAGIFP 131 (293)
T ss_dssp HHHHSCCCEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 5699999999653
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.25 E-value=2e-11 Score=113.57 Aligned_cols=73 Identities=16% Similarity=0.252 Sum_probs=64.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
|+|+|+||||++|++++++|+++| ++|++++|+.++++++. ..++.++.+|++|+++ +.++++|
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g-------~~V~~~~R~~~~~~~~~-------~~~~~~~~~D~~d~~~--~~~~~~d 64 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRG-------HEVLAVVRDPQKAADRL-------GATVATLVKEPLVLTE--ADLDSVD 64 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHT-------CTTSEEEECCGGGCCH--HHHTTCS
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCC-------CEEEEEEeccccccccc-------CCCceEEecccccccH--hhcccCC
Confidence 479999999999999999999998 89999999998876542 2478999999999887 7889999
Q ss_pred EEeecCCCC
Q 012947 91 LLLNCVGPY 99 (452)
Q Consensus 91 vVIn~aGp~ 99 (452)
+||||+|+.
T Consensus 65 ~vi~~ag~~ 73 (224)
T 3h2s_A 65 AVVDALSVP 73 (224)
T ss_dssp EEEECCCCC
T ss_pred EEEECCccC
Confidence 999999975
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.25 E-value=3.2e-12 Score=123.38 Aligned_cols=84 Identities=19% Similarity=0.212 Sum_probs=71.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||+++++.|+++| ++|++++|+.++++++.+++......++.++.+|++|+++++++++
T Consensus 20 ~k~vlVTGas~gIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 92 (266)
T 4egf_A 20 GKRALITGATKGIGADIARAFAAAG-------ARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRA 92 (266)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence 4579999999999999999999998 8999999999998887766531013578899999999999988876
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
+.|+||||||...
T Consensus 93 ~~~~g~id~lv~nAg~~~ 110 (266)
T 4egf_A 93 AEAFGGLDVLVNNAGISH 110 (266)
T ss_dssp HHHHTSCSEEEEECCCCC
T ss_pred HHHcCCCCEEEECCCcCC
Confidence 7899999999654
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.25 E-value=1.2e-11 Score=119.55 Aligned_cols=84 Identities=18% Similarity=0.139 Sum_probs=71.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
....++||||+|+||+.++++|+++| ++|++.+|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 30 ~~k~vlITGasggIG~~la~~L~~~G-------~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~v~~~~~~ 101 (272)
T 1yb1_A 30 TGEIVLITGAGHGIGRLTAYEFAKLK-------SKLVLWDINKHGLEETAAKCKG-LGAKVHTFVVDCSNREDIYSSAKK 101 (272)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEEcCHHHHHHHHHHHHh-cCCeEEEEEeeCCCHHHHHHHHHH
Confidence 34679999999999999999999998 8999999999988877766531 12467889999999999988876
Q ss_pred ------CccEEeecCCCCC
Q 012947 88 ------QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (452)
++|+||||||...
T Consensus 102 ~~~~~g~iD~li~~Ag~~~ 120 (272)
T 1yb1_A 102 VKAEIGDVSILVNNAGVVY 120 (272)
T ss_dssp HHHHTCCCSEEEECCCCCC
T ss_pred HHHHCCCCcEEEECCCcCC
Confidence 6899999999653
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.25 E-value=3e-11 Score=117.13 Aligned_cols=80 Identities=24% Similarity=0.224 Sum_probs=72.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||+.++++|+++| ++|++++|+.++++++.++++ .++.++.+|++|+++++++++
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~ 96 (272)
T 4dyv_A 28 KKIAIVTGAGSGVGRAVAVALAGAG-------YGVALAGRRLDALQETAAEIG----DDALCVPTDVTDPDSVRALFTAT 96 (272)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHT----SCCEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHhC----CCeEEEEecCCCHHHHHHHHHHH
Confidence 4579999999999999999999998 899999999999999988874 478899999999999999887
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
+.|+||||||...
T Consensus 97 ~~~~g~iD~lVnnAg~~~ 114 (272)
T 4dyv_A 97 VEKFGRVDVLFNNAGTGA 114 (272)
T ss_dssp HHHHSCCCEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 7899999999643
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.25 E-value=1.1e-11 Score=120.42 Aligned_cols=84 Identities=12% Similarity=0.098 Sum_probs=71.5
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec-------------ChhHHHHHHHHhCCCCCCCccEEEEe
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-------------NPTRVKQALQWASPSHSLSIPILTAD 75 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR-------------~~~kl~~l~~~l~~~~~~~v~~v~~D 75 (452)
+...++||||+|+||++++++|+++| ++|++++| +.++++++.+++.. ...++.++.+|
T Consensus 14 ~gk~~lVTGas~gIG~a~a~~la~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D 85 (280)
T 3pgx_A 14 QGRVAFITGAARGQGRSHAVRLAAEG-------ADIIACDICAPVSASVTYAPASPEDLDETARLVED-QGRKALTRVLD 85 (280)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHT-TTCCEEEEECC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeccccccccccccccCHHHHHHHHHHHHh-cCCeEEEEEcC
Confidence 34679999999999999999999998 89999998 67888887776642 23567889999
Q ss_pred CCCHHHHHHHHc-------CccEEeecCCCCC
Q 012947 76 TTDPPSLHRLCS-------QTKLLLNCVGPYR 100 (452)
Q Consensus 76 l~d~~sl~~~~~-------~~dvVIn~aGp~~ 100 (452)
++|+++++++++ +.|+||||||...
T Consensus 86 v~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~ 117 (280)
T 3pgx_A 86 VRDDAALRELVADGMEQFGRLDVVVANAGVLS 117 (280)
T ss_dssp TTCHHHHHHHHHHHHHHHCCCCEEEECCCCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 999999998887 6899999999654
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.25 E-value=2.9e-11 Score=117.55 Aligned_cols=79 Identities=13% Similarity=0.027 Sum_probs=71.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||+++++.|+++| ++|++++|+.++++++.++++ .++..+.+|++|+++++++++
T Consensus 27 ~k~vlVTGas~GIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~ 95 (277)
T 4dqx_A 27 QRVCIVTGGGSGIGRATAELFAKNG-------AYVVVADVNEDAAVRVANEIG----SKAFGVRVDVSSAKDAESMVEKT 95 (277)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESSHHHHHHHHHHHC----TTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhC----CceEEEEecCCCHHHHHHHHHHH
Confidence 4579999999999999999999998 899999999999999888763 467889999999999998887
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
+.|+||||||..
T Consensus 96 ~~~~g~iD~lv~nAg~~ 112 (277)
T 4dqx_A 96 TAKWGRVDVLVNNAGFG 112 (277)
T ss_dssp HHHHSCCCEEEECCCCC
T ss_pred HHHcCCCCEEEECCCcC
Confidence 789999999954
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.25 E-value=4.5e-11 Score=115.10 Aligned_cols=84 Identities=13% Similarity=0.065 Sum_probs=70.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~-~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++||||+|+||++++++|+++| ++|++.+|+.++++++.+++.. ....++.++.+|++|+++++++++
T Consensus 13 ~k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 85 (267)
T 1iy8_A 13 DRVVLITGGGSGLGRATAVRLAAEG-------AKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTA 85 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHH
Confidence 4679999999999999999999998 8999999999988877666521 012467888999999999998887
Q ss_pred ------CccEEeecCCCCC
Q 012947 88 ------QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (452)
++|+||||||...
T Consensus 86 ~~~~~g~id~lv~nAg~~~ 104 (267)
T 1iy8_A 86 TTERFGRIDGFFNNAGIEG 104 (267)
T ss_dssp HHHHHSCCSEEEECCCCCC
T ss_pred HHHHcCCCCEEEECCCcCC
Confidence 6799999999653
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.24 E-value=8.5e-12 Score=119.37 Aligned_cols=84 Identities=18% Similarity=0.094 Sum_probs=71.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC--CCCCCccEEEEeCCCHHHHHHHHc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--SHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~--~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
...++||||+|+||+.++++|+++| ++|++++|+.++++++.+++.. ....++.++.+|++|+++++++++
T Consensus 7 ~k~~lVTGas~GIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 79 (250)
T 3nyw_A 7 KGLAIITGASQGIGAVIAAGLATDG-------YRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIK 79 (250)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHHT-------CEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHH
Confidence 4579999999999999999999998 8999999999999888776632 012567899999999999988876
Q ss_pred -------CccEEeecCCCCC
Q 012947 88 -------QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -------~~dvVIn~aGp~~ 100 (452)
+.|+||||||...
T Consensus 80 ~~~~~~g~iD~lvnnAg~~~ 99 (250)
T 3nyw_A 80 DIHQKYGAVDILVNAAAMFM 99 (250)
T ss_dssp HHHHHHCCEEEEEECCCCCC
T ss_pred HHHHhcCCCCEEEECCCcCC
Confidence 5899999999653
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.24 E-value=2.3e-11 Score=116.97 Aligned_cols=82 Identities=15% Similarity=0.150 Sum_probs=71.1
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
+...++||||+|+||+.++++|+++| ++|++++|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~ 99 (262)
T 3rkr_A 28 SGQVAVVTGASRGIGAAIARKLGSLG-------ARVVLTARDVEKLRAVEREIVA-AGGEAESHACDLSHSDAIAAFATG 99 (262)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHH-TTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHH-hCCceeEEEecCCCHHHHHHHHHH
Confidence 45679999999999999999999998 8999999999999888777632 23467889999999999988876
Q ss_pred ------CccEEeecCCC
Q 012947 88 ------QTKLLLNCVGP 98 (452)
Q Consensus 88 ------~~dvVIn~aGp 98 (452)
+.|+||||||.
T Consensus 100 ~~~~~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 100 VLAAHGRCDVLVNNAGV 116 (262)
T ss_dssp HHHHHSCCSEEEECCCC
T ss_pred HHHhcCCCCEEEECCCc
Confidence 48999999996
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.24 E-value=2.5e-11 Score=116.14 Aligned_cols=84 Identities=15% Similarity=0.156 Sum_probs=70.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeC--CCHHHHHHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADT--TDPPSLHRLC 86 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl--~d~~sl~~~~ 86 (452)
+...++||||+|+||+.+++.|+++| ++|++++|+.++++++.+++......++.++.+|+ +|++++++++
T Consensus 11 ~~k~vlVTGas~gIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 83 (252)
T 3f1l_A 11 NDRIILVTGASDGIGREAAMTYARYG-------ATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLA 83 (252)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHH
Confidence 45689999999999999999999998 89999999999988877665321123678899999 8999988887
Q ss_pred c-------CccEEeecCCCC
Q 012947 87 S-------QTKLLLNCVGPY 99 (452)
Q Consensus 87 ~-------~~dvVIn~aGp~ 99 (452)
+ +.|+||||||..
T Consensus 84 ~~~~~~~g~id~lv~nAg~~ 103 (252)
T 3f1l_A 84 QRIAVNYPRLDGVLHNAGLL 103 (252)
T ss_dssp HHHHHHCSCCSEEEECCCCC
T ss_pred HHHHHhCCCCCEEEECCccC
Confidence 6 689999999964
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.24 E-value=1.8e-11 Score=114.01 Aligned_cols=74 Identities=16% Similarity=0.237 Sum_probs=66.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCC-HHHHHHHHcCc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTD-PPSLHRLCSQT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d-~~sl~~~~~~~ 89 (452)
|+|+|+||||++|+.++++|+++| ++|.+++|+.++++. ..++.++.+|++| ++++.++++++
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g-------~~V~~~~R~~~~~~~---------~~~~~~~~~D~~d~~~~~~~~~~~~ 64 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTD-------YQIYAGARKVEQVPQ---------YNNVKAVHFDVDWTPEEMAKQLHGM 64 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSS-------CEEEEEESSGGGSCC---------CTTEEEEECCTTSCHHHHHTTTTTC
T ss_pred CeEEEECCCCHHHHHHHHHHHHCC-------CEEEEEECCccchhh---------cCCceEEEecccCCHHHHHHHHcCC
Confidence 479999999999999999999988 899999999877532 1468899999999 99999999999
Q ss_pred cEEeecCCCCC
Q 012947 90 KLLLNCVGPYR 100 (452)
Q Consensus 90 dvVIn~aGp~~ 100 (452)
|+||||+|...
T Consensus 65 d~vi~~ag~~~ 75 (219)
T 3dqp_A 65 DAIINVSGSGG 75 (219)
T ss_dssp SEEEECCCCTT
T ss_pred CEEEECCcCCC
Confidence 99999999754
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.23 E-value=3e-11 Score=117.64 Aligned_cols=82 Identities=16% Similarity=0.061 Sum_probs=72.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||+.+++.|+++| ++|++++|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 8 gk~vlVTGas~GIG~aia~~la~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~ 79 (280)
T 3tox_A 8 GKIAIVTGASSGIGRAAALLFAREG-------AKVVVTARNGNALAELTDEIAG-GGGEAAALAGDVGDEALHEALVELA 79 (280)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTT-------CEEEECCSCHHHHHHHHHHHTT-TTCCEEECCCCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHh-cCCcEEEEECCCCCHHHHHHHHHHH
Confidence 4579999999999999999999998 8999999999999999888853 23567888999999999998887
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
+.|+||||||..
T Consensus 80 ~~~~g~iD~lvnnAg~~ 96 (280)
T 3tox_A 80 VRRFGGLDTAFNNAGAL 96 (280)
T ss_dssp HHHHSCCCEEEECCCCC
T ss_pred HHHcCCCCEEEECCCCC
Confidence 689999999965
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=8.7e-12 Score=119.67 Aligned_cols=82 Identities=18% Similarity=0.193 Sum_probs=70.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH---
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC--- 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~--- 86 (452)
...++||||+|+||++++++|+++| ++|++.+|+.++++++.+++.. ...++.++.+|++|++++++++
T Consensus 9 ~k~vlVTGas~giG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (260)
T 2ae2_A 9 GCTALVTGGSRGIGYGIVEELASLG-------ASVYTCSRNQKELNDCLTQWRS-KGFKVEASVCDLSSRSERQELMNTV 80 (260)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHH-TTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 4579999999999999999999998 8999999999998887766531 1245778899999999998887
Q ss_pred -----cCccEEeecCCCC
Q 012947 87 -----SQTKLLLNCVGPY 99 (452)
Q Consensus 87 -----~~~dvVIn~aGp~ 99 (452)
.+.|+||||||..
T Consensus 81 ~~~~~g~id~lv~~Ag~~ 98 (260)
T 2ae2_A 81 ANHFHGKLNILVNNAGIV 98 (260)
T ss_dssp HHHTTTCCCEEEECCCCC
T ss_pred HHHcCCCCCEEEECCCCC
Confidence 4689999999964
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.23 E-value=2e-11 Score=118.67 Aligned_cols=80 Identities=18% Similarity=0.141 Sum_probs=71.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...+|||||+++||+.+++.|+++| ++|++.+|+.++++++.++++ .++..+.+|++|+++++++++
T Consensus 29 gKvalVTGas~GIG~aiA~~la~~G-------a~V~i~~r~~~~l~~~~~~~g----~~~~~~~~Dv~~~~~v~~~~~~~ 97 (273)
T 4fgs_A 29 AKIAVITGATSGIGLAAAKRFVAEG-------ARVFITGRRKDVLDAAIAEIG----GGAVGIQADSANLAELDRLYEKV 97 (273)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHC----TTCEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHcC----CCeEEEEecCCCHHHHHHHHHHH
Confidence 3579999999999999999999999 899999999999999999884 467889999999999998876
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
+.|++|||||...
T Consensus 98 ~~~~G~iDiLVNNAG~~~ 115 (273)
T 4fgs_A 98 KAEAGRIDVLFVNAGGGS 115 (273)
T ss_dssp HHHHSCEEEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 5799999999543
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.23 E-value=6.7e-11 Score=115.31 Aligned_cols=82 Identities=16% Similarity=0.088 Sum_probs=72.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||+++++.|+++| ++|++++|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G-------~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dv~d~~~v~~~~~~~ 99 (283)
T 3v8b_A 28 SPVALITGAGSGIGRATALALAADG-------VTVGALGRTRTEVEEVADEIVG-AGGQAIALEADVSDELQMRNAVRDL 99 (283)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTT-------CEEEEEESSHHHHHHHHHHHTT-TTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHH
Confidence 4579999999999999999999998 8999999999999998888853 23567889999999999988887
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
+.|+||||||..
T Consensus 100 ~~~~g~iD~lVnnAg~~ 116 (283)
T 3v8b_A 100 VLKFGHLDIVVANAGIN 116 (283)
T ss_dssp HHHHSCCCEEEECCCCC
T ss_pred HHHhCCCCEEEECCCCC
Confidence 689999999964
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.23 E-value=2.3e-11 Score=117.73 Aligned_cols=82 Identities=20% Similarity=0.204 Sum_probs=69.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHh---CCCCCCCccEEEEeCCCHHHHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWA---SPSHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l---~~~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
...++||||+|+||++++++|+++| ++|++.+|+.++++++.+++ .. ...++.++.+|++|++++++++
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~ 77 (278)
T 1spx_A 6 EKVAIITGSSNGIGRATAVLFAREG-------AKVTITGRHAERLEETRQQILAAGV-SEQNVNSVVADVTTDAGQDEIL 77 (278)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHHTTC-CGGGEEEEECCTTSHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHhccc-CCCceeEEecccCCHHHHHHHH
Confidence 3579999999999999999999998 89999999999998887766 31 1235778899999999999988
Q ss_pred c-------CccEEeecCCCC
Q 012947 87 S-------QTKLLLNCVGPY 99 (452)
Q Consensus 87 ~-------~~dvVIn~aGp~ 99 (452)
+ ++|+||||||..
T Consensus 78 ~~~~~~~g~id~lv~~Ag~~ 97 (278)
T 1spx_A 78 STTLGKFGKLDILVNNAGAA 97 (278)
T ss_dssp HHHHHHHSCCCEEEECCC--
T ss_pred HHHHHHcCCCCEEEECCCCC
Confidence 7 799999999964
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=5.4e-12 Score=121.35 Aligned_cols=82 Identities=10% Similarity=0.123 Sum_probs=70.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEE-ecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~ia-gR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++||||+|+||++++++|+++| ++|++. +|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 4 ~k~vlVTGas~gIG~aia~~l~~~G-------~~vv~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~ 75 (258)
T 3oid_A 4 NKCALVTGSSRGVGKAAAIRLAENG-------YNIVINYARSKKAALETAEEIEK-LGVKVLVVKANVGQPAKIKEMFQQ 75 (258)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHTT-------CEEEEEESSCHHHHHHHHHHHHT-TTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEecCCchHHHHHHHHHHHCC-------CEEEEEcCCCHHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHH
Confidence 4579999999999999999999998 788886 9999998888777642 23578899999999999998887
Q ss_pred ------CccEEeecCCCC
Q 012947 88 ------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (452)
+.|+||||||..
T Consensus 76 ~~~~~g~id~lv~nAg~~ 93 (258)
T 3oid_A 76 IDETFGRLDVFVNNAASG 93 (258)
T ss_dssp HHHHHSCCCEEEECCCCC
T ss_pred HHHHcCCCCEEEECCCCC
Confidence 459999999854
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.23 E-value=5.5e-12 Score=120.47 Aligned_cols=81 Identities=16% Similarity=0.119 Sum_probs=71.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
+...++||||+|+||+++++.|+++| ++|++.+|+.++++++.+++. .+...+.+|++|+++++++++
T Consensus 8 ~gk~~lVTGas~gIG~a~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~ 76 (248)
T 3op4_A 8 EGKVALVTGASRGIGKAIAELLAERG-------AKVIGTATSESGAQAISDYLG----DNGKGMALNVTNPESIEAVLKA 76 (248)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTT-------CEEEEEESSHHHHHHHHHHHG----GGEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhc----ccceEEEEeCCCHHHHHHHHHH
Confidence 34679999999999999999999998 899999999999998888774 356788999999999998887
Q ss_pred ------CccEEeecCCCCC
Q 012947 88 ------QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (452)
+.|+||||||...
T Consensus 77 ~~~~~g~iD~lv~nAg~~~ 95 (248)
T 3op4_A 77 ITDEFGGVDILVNNAGITR 95 (248)
T ss_dssp HHHHHCCCSEEEECCCCCC
T ss_pred HHHHcCCCCEEEECCCCCC
Confidence 7899999999653
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=1.5e-11 Score=117.38 Aligned_cols=82 Identities=18% Similarity=0.175 Sum_probs=70.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||++++++|+++| ++|++.+|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dv~~~~~~~~~~~~~ 78 (247)
T 2jah_A 7 GKVALITGASSGIGEATARALAAEG-------AAVAIAARRVEKLRALGDELTA-AGAKVHVLELDVADRQGVDAAVAST 78 (247)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHh-cCCcEEEEECCCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 8999999999998887776631 13467889999999999988876
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
+.|+||||||..
T Consensus 79 ~~~~g~id~lv~nAg~~ 95 (247)
T 2jah_A 79 VEALGGLDILVNNAGIM 95 (247)
T ss_dssp HHHHSCCSEEEECCCCC
T ss_pred HHHcCCCCEEEECCCCC
Confidence 789999999964
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.23 E-value=5.6e-11 Score=117.92 Aligned_cols=144 Identities=13% Similarity=0.106 Sum_probs=96.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~-~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++||||+|+||++++++|+++| ++|++++|+.++++++.+++.. ....++.++.+|++|+++++++++
T Consensus 8 ~k~vlVTGas~gIG~~la~~l~~~G-------~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~ 80 (319)
T 3ioy_A 8 GRTAFVTGGANGVGIGLVRQLLNQG-------CKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADE 80 (319)
T ss_dssp TCEEEEETTTSTHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEcCCchHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHH
Confidence 4579999999999999999999998 8999999999999888776632 011267889999999999998886
Q ss_pred ------CccEEeecCCCCCC-----CCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHH----hCc-cEEEcC-CC
Q 012947 88 ------QTKLLLNCVGPYRL-----HGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAV----ETG-SLLVSA-CG 150 (452)
Q Consensus 88 ------~~dvVIn~aGp~~~-----~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~----~~g-v~iv~~-~G 150 (452)
+.|+||||||.... ....-.+...+ +++.|....++.+.+.+.+..+ ..| +++++| +|
T Consensus 81 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~-----~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~ 155 (319)
T 3ioy_A 81 VEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLG-----VNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAA 155 (319)
T ss_dssp HHHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHH-----HHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGG
T ss_pred HHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHH-----HHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEeccccc
Confidence 56999999995432 22233333333 3444555556665554443321 123 333333 34
Q ss_pred CCcchhhHHHHHHhhh
Q 012947 151 FDSIPAELGVMFNSRQ 166 (452)
Q Consensus 151 ~~s~P~dl~~~~~~~~ 166 (452)
+.+.| ....|.++|.
T Consensus 156 ~~~~~-~~~~Y~aSKa 170 (319)
T 3ioy_A 156 FLAAG-SPGIYNTTKF 170 (319)
T ss_dssp TCCCS-SSHHHHHHHH
T ss_pred ccCCC-CCHHHHHHHH
Confidence 44444 3455655555
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.23 E-value=8.7e-12 Score=121.20 Aligned_cols=83 Identities=17% Similarity=0.099 Sum_probs=72.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||++++++|+++| ++|++++|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 32 gk~~lVTGas~GIG~aia~~la~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~~ 103 (276)
T 3r1i_A 32 GKRALITGASTGIGKKVALAYAEAG-------AQVAVAARHSDALQVVADEIAG-VGGKALPIRCDVTQPDQVRGMLDQM 103 (276)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEESSGGGGHHHHHHHHH-TTCCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 4689999999999999999999998 8999999999998888777632 23478899999999999999887
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
+.|+||||||...
T Consensus 104 ~~~~g~iD~lvnnAg~~~ 121 (276)
T 3r1i_A 104 TGELGGIDIAVCNAGIVS 121 (276)
T ss_dssp HHHHSCCSEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 7899999999754
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=4.7e-11 Score=114.77 Aligned_cols=79 Identities=14% Similarity=0.050 Sum_probs=70.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||++++++|+++| ++|++.+|+.++++++.+++. .++.++.+|++|+++++++++
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~ 75 (260)
T 1nff_A 7 GKVALVSGGARGMGASHVRAMVAEG-------AKVVFGDILDEEGKAMAAELA----DAARYVHLDVTQPAQWKAAVDTA 75 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHTG----GGEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhh----cCceEEEecCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 899999999999988877763 246788999999999999887
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
++|+||||||..
T Consensus 76 ~~~~g~iD~lv~~Ag~~ 92 (260)
T 1nff_A 76 VTAFGGLHVLVNNAGIL 92 (260)
T ss_dssp HHHHSCCCEEEECCCCC
T ss_pred HHHcCCCCEEEECCCCC
Confidence 799999999964
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.23 E-value=5.1e-11 Score=114.04 Aligned_cols=81 Identities=16% Similarity=0.097 Sum_probs=69.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..++||||+|+||++++++|+++| ++|++++|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~ 74 (256)
T 1geg_A 3 KVALVTGAGQGIGKAIALRLVKDG-------FAVAIADYNDATAKAVASEINQ-AGGHAVAVKVDVSDRDQVFAAVEQAR 74 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 469999999999999999999998 8999999999988877766531 12467889999999999999887
Q ss_pred ----CccEEeecCCCC
Q 012947 88 ----QTKLLLNCVGPY 99 (452)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (452)
++|+||||||..
T Consensus 75 ~~~g~id~lv~nAg~~ 90 (256)
T 1geg_A 75 KTLGGFDVIVNNAGVA 90 (256)
T ss_dssp HHTTCCCEEEECCCCC
T ss_pred HHhCCCCEEEECCCCC
Confidence 789999999954
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.22 E-value=4.8e-12 Score=122.71 Aligned_cols=83 Identities=17% Similarity=0.165 Sum_probs=72.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||++++++|+++| ++|++.+|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 26 gk~~lVTGas~gIG~aia~~la~~G-------~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dv~d~~~v~~~~~~~ 97 (271)
T 4ibo_A 26 GRTALVTGSSRGLGRAMAEGLAVAG-------ARILINGTDPSRVAQTVQEFRN-VGHDAEAVAFDVTSESEIIEAFARL 97 (271)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTT-------CEEEECCSCHHHHHHHHHHHHH-TTCCEEECCCCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHH
Confidence 4579999999999999999999998 8999999999999888877632 23467888999999999999887
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
+.|+||||||...
T Consensus 98 ~~~~g~iD~lv~nAg~~~ 115 (271)
T 4ibo_A 98 DEQGIDVDILVNNAGIQF 115 (271)
T ss_dssp HHHTCCCCEEEECCCCCC
T ss_pred HHHCCCCCEEEECCCCCC
Confidence 6899999999653
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=1.1e-11 Score=118.64 Aligned_cols=80 Identities=19% Similarity=0.059 Sum_probs=70.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||++++++|+++| ++|++++|+.++++++.++++ .++.++.+|++|+++++++++
T Consensus 5 ~k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~ 73 (254)
T 1hdc_A 5 GKTVIITGGARGLGAEAARQAVAAG-------ARVVLADVLDEEGAATARELG----DAARYQHLDVTIEEDWQRVVAYA 73 (254)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHTTG----GGEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhC----CceeEEEecCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 899999999999988877652 357788999999999998887
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
++|+||||||...
T Consensus 74 ~~~~g~iD~lv~nAg~~~ 91 (254)
T 1hdc_A 74 REEFGSVDGLVNNAGIST 91 (254)
T ss_dssp HHHHSCCCEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 7899999999643
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=8.3e-11 Score=114.40 Aligned_cols=112 Identities=10% Similarity=0.051 Sum_probs=83.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC----------------hhHHHHHHHHhCCCCCCCccEEE
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN----------------PTRVKQALQWASPSHSLSIPILT 73 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~----------------~~kl~~l~~~l~~~~~~~v~~v~ 73 (452)
...++||||+|+||+++++.|+++| ++|++++|+ .++++++.+++.. ...++.++.
T Consensus 11 ~k~~lVTGas~gIG~aia~~la~~G-------~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 82 (286)
T 3uve_A 11 GKVAFVTGAARGQGRSHAVRLAQEG-------ADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKG-HNRRIVTAE 82 (286)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHT-TTCCEEEEE
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CeEEEEeccccccccccccccccCCHHHHHHHHHHHhh-cCCceEEEE
Confidence 4679999999999999999999998 899999887 7778777766642 235788899
Q ss_pred EeCCCHHHHHHHHc-------CccEEeecCCCCCCC------CHHHHHHHHHhCCcEEEecCcHHHHHHHHHHH
Q 012947 74 ADTTDPPSLHRLCS-------QTKLLLNCVGPYRLH------GDPVAAACVHSGCDYLDISGEPEFMERMEARY 134 (452)
Q Consensus 74 ~Dl~d~~sl~~~~~-------~~dvVIn~aGp~~~~------~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~ 134 (452)
+|++|+++++++++ +.|+||||||..... ...-.+...+ +++.+....++...+.+
T Consensus 83 ~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~-----~N~~g~~~~~~~~~~~~ 151 (286)
T 3uve_A 83 VDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMID-----INLAGVWKTVKAGVPHM 151 (286)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHH-----HHTHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHH-----HhhHHHHHHHHHHHHHH
Confidence 99999999998887 789999999964322 2233333333 34445555556554433
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.22 E-value=1.3e-11 Score=120.24 Aligned_cols=84 Identities=19% Similarity=0.222 Sum_probs=70.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR-~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++||||+|+||+.++++|+++| ++|++.+| +.++++++.+++......++.++.+|++|+++++++++
T Consensus 25 ~k~~lVTGas~GIG~~ia~~la~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 97 (281)
T 3v2h_A 25 TKTAVITGSTSGIGLAIARTLAKAG-------ANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAM 97 (281)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTT-------CEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHH
Confidence 3579999999999999999999998 89999999 67777777776642123567888999999999998887
Q ss_pred ------CccEEeecCCCCC
Q 012947 88 ------QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (452)
+.|+||||||...
T Consensus 98 ~~~~~g~iD~lv~nAg~~~ 116 (281)
T 3v2h_A 98 VADRFGGADILVNNAGVQF 116 (281)
T ss_dssp HHHHTSSCSEEEECCCCCC
T ss_pred HHHHCCCCCEEEECCCCCC
Confidence 6899999999653
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.22 E-value=7e-11 Score=113.75 Aligned_cols=82 Identities=18% Similarity=0.172 Sum_probs=71.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||+++++.|+++| ++|++++|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~ 82 (264)
T 3ucx_A 11 DKVVVISGVGPALGTTLARRCAEQG-------ADLVLAARTVERLEDVAKQVTD-TGRRALSVGTDITDDAQVAHLVDET 82 (264)
T ss_dssp TCEEEEESCCTTHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CcEEEEECCCcHHHHHHHHHHHHCc-------CEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 4579999999999999999999998 8999999999999888777632 23578899999999999998887
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
+.|+||||||..
T Consensus 83 ~~~~g~id~lv~nAg~~ 99 (264)
T 3ucx_A 83 MKAYGRVDVVINNAFRV 99 (264)
T ss_dssp HHHTSCCSEEEECCCSC
T ss_pred HHHcCCCcEEEECCCCC
Confidence 679999999864
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.22 E-value=1.8e-11 Score=119.55 Aligned_cols=89 Identities=17% Similarity=0.198 Sum_probs=72.2
Q ss_pred CCCCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCH-HHHH
Q 012947 5 SQIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDP-PSLH 83 (452)
Q Consensus 5 ~~~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~-~sl~ 83 (452)
+.+.+...++||||+|+||++++++|+++| ++|++++|+.++++++.+++......++.++.+|++|+ ++++
T Consensus 7 ~~~~~~k~vlITGas~GIG~~~a~~L~~~G-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~ 79 (311)
T 3o26_A 7 NTVTKRRCAVVTGGNKGIGFEICKQLSSNG-------IMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMS 79 (311)
T ss_dssp -----CCEEEESSCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHH
T ss_pred CccCCCcEEEEecCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHH
Confidence 334456789999999999999999999998 89999999999998888877432234688999999998 8887
Q ss_pred HHHc-------CccEEeecCCCCC
Q 012947 84 RLCS-------QTKLLLNCVGPYR 100 (452)
Q Consensus 84 ~~~~-------~~dvVIn~aGp~~ 100 (452)
++++ +.|+||||||...
T Consensus 80 ~~~~~~~~~~g~iD~lv~nAg~~~ 103 (311)
T 3o26_A 80 SLADFIKTHFGKLDILVNNAGVAG 103 (311)
T ss_dssp HHHHHHHHHHSSCCEEEECCCCCS
T ss_pred HHHHHHHHhCCCCCEEEECCcccc
Confidence 7765 7899999999753
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=1.6e-11 Score=118.00 Aligned_cols=84 Identities=17% Similarity=0.184 Sum_probs=70.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||++++++|+++| ++|++.+|+.++++++.+++......++.++.+|++|+++++++++
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 79 (263)
T 3ai3_A 7 GKVAVITGSSSGIGLAIAEGFAKEG-------AHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESV 79 (263)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 8999999999988877766521002467889999999999998887
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
++|+||||||...
T Consensus 80 ~~~~g~id~lv~~Ag~~~ 97 (263)
T 3ai3_A 80 RSSFGGADILVNNAGTGS 97 (263)
T ss_dssp HHHHSSCSEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 7899999999653
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.22 E-value=1.6e-11 Score=119.08 Aligned_cols=97 Identities=14% Similarity=0.198 Sum_probs=77.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHc-CCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 11 FDVIILGASGFTGKYVVREALKL-FNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~-g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
|+|+|+||||++|++++++|.+. + ++|+++.|+.++++.+. ..++.++.+|++|++++.++++++
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g-------~~V~~~~R~~~~~~~~~-------~~~v~~~~~D~~d~~~l~~~~~~~ 66 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHI-------DHFHIGVRNVEKVPDDW-------RGKVSVRQLDYFNQESMVEAFKGM 66 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTC-------TTEEEEESSGGGSCGGG-------BTTBEEEECCTTCHHHHHHHTTTC
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCC-------CcEEEEECCHHHHHHhh-------hCCCEEEEcCCCCHHHHHHHHhCC
Confidence 47999999999999999999987 5 78999999998764331 247899999999999999999999
Q ss_pred cEEeecCCCCCCC------CHHHHHHHHHhCC-cEEEec
Q 012947 90 KLLLNCVGPYRLH------GDPVAAACVHSGC-DYLDIS 121 (452)
Q Consensus 90 dvVIn~aGp~~~~------~~~vv~ac~~~g~-~yvDls 121 (452)
|+||||+|+.... ..+++++|.+.++ ++|.+|
T Consensus 67 d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~S 105 (289)
T 3e48_A 67 DTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIG 105 (289)
T ss_dssp SEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CEEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEEEEc
Confidence 9999999875321 1456677777665 455554
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=4.5e-11 Score=114.19 Aligned_cols=77 Identities=17% Similarity=0.252 Sum_probs=69.6
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc----
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~---- 87 (452)
.++||||+|+||++++++|+++| ++|++.+|+.++++++.+++. .++.++.+|++|+++++++++
T Consensus 2 ~vlVTGas~gIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~ 70 (248)
T 3asu_A 2 IVLVTGATAGFGECITRRFIQQG-------HKVIATGRRQERLQELKDELG----DNLYIAQLDVRNRAAIEEMLASLPA 70 (248)
T ss_dssp EEEETTTTSTTHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHC----TTEEEEECCTTCHHHHHHHHHTSCT
T ss_pred EEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhc----CceEEEEcCCCCHHHHHHHHHHHHH
Confidence 68999999999999999999998 899999999999988888773 467889999999999999987
Q ss_pred ---CccEEeecCCCC
Q 012947 88 ---QTKLLLNCVGPY 99 (452)
Q Consensus 88 ---~~dvVIn~aGp~ 99 (452)
+.|+||||||..
T Consensus 71 ~~g~iD~lvnnAg~~ 85 (248)
T 3asu_A 71 EWCNIDILVNNAGLA 85 (248)
T ss_dssp TTCCCCEEEECCCCC
T ss_pred hCCCCCEEEECCCcC
Confidence 579999999964
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.21 E-value=5e-11 Score=112.30 Aligned_cols=76 Identities=14% Similarity=0.174 Sum_probs=67.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCc-cEEEEeCCCHHHHHHHHc
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSI-PILTADTTDPPSLHRLCS 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v-~~v~~Dl~d~~sl~~~~~ 87 (452)
+.++|+|+||||++|++++++|+++| ++|++++|+.++++++.+ .++ .++.+|++ +++.+.+.
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G-------~~V~~~~R~~~~~~~~~~-------~~~~~~~~~Dl~--~~~~~~~~ 83 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKG-------HEPVAMVRNEEQGPELRE-------RGASDIVVANLE--EDFSHAFA 83 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESSGGGHHHHHH-------TTCSEEEECCTT--SCCGGGGT
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCC-------CeEEEEECChHHHHHHHh-------CCCceEEEcccH--HHHHHHHc
Confidence 45789999999999999999999998 899999999999877654 257 89999998 78888999
Q ss_pred CccEEeecCCCCC
Q 012947 88 QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ~~dvVIn~aGp~~ 100 (452)
++|+||||||+..
T Consensus 84 ~~D~vi~~ag~~~ 96 (236)
T 3e8x_A 84 SIDAVVFAAGSGP 96 (236)
T ss_dssp TCSEEEECCCCCT
T ss_pred CCCEEEECCCCCC
Confidence 9999999999764
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.21 E-value=5.1e-11 Score=115.26 Aligned_cols=79 Identities=20% Similarity=0.069 Sum_probs=71.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||++++++|+++| ++|++.+|+.++++++.++++ .++.++.+|++|+++++++++
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~ 79 (271)
T 3tzq_B 11 NKVAIITGACGGIGLETSRVLARAG-------ARVVLADLPETDLAGAAASVG----RGAVHHVVDLTNEVSVRALIDFT 79 (271)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECTTSCHHHHHHHHC----TTCEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEcCCHHHHHHHHHHhC----CCeEEEECCCCCHHHHHHHHHHH
Confidence 4579999999999999999999998 899999999999998888874 467889999999999999887
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
+.|+||||||..
T Consensus 80 ~~~~g~id~lv~nAg~~ 96 (271)
T 3tzq_B 80 IDTFGRLDIVDNNAAHS 96 (271)
T ss_dssp HHHHSCCCEEEECCCCC
T ss_pred HHHcCCCCEEEECCCCC
Confidence 789999999965
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.21 E-value=5.5e-11 Score=115.19 Aligned_cols=79 Identities=15% Similarity=0.153 Sum_probs=70.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||++++++|+++| ++|++++|+.++++++.+++. .++.++.+|++|+++++++++
T Consensus 5 ~k~vlVTGas~gIG~~~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~~~~~~~~~ 73 (281)
T 3m1a_A 5 AKVWLVTGASSGFGRAIAEAAVAAG-------DTVIGTARRTEALDDLVAAYP----DRAEAISLDVTDGERIDVVAADV 73 (281)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTT-------CEEEEEESSGGGGHHHHHHCT----TTEEEEECCTTCHHHHHHHHHHH
T ss_pred CcEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHhcc----CCceEEEeeCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 899999999999988887763 478899999999999998887
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
++|+||||||..
T Consensus 74 ~~~~g~id~lv~~Ag~~ 90 (281)
T 3m1a_A 74 LARYGRVDVLVNNAGRT 90 (281)
T ss_dssp HHHHSCCSEEEECCCCE
T ss_pred HHhCCCCCEEEECCCcC
Confidence 789999999964
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.21 E-value=2.4e-11 Score=116.67 Aligned_cols=79 Identities=18% Similarity=0.062 Sum_probs=70.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||++++++|+++| ++|++.+|+.++++++.+++. .++.++.+|++|+++++++++
T Consensus 12 ~k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~d~~~v~~~~~~~ 80 (263)
T 3ak4_A 12 GRKAIVTGGSKGIGAAIARALDKAG-------ATVAIADLDVMAAQAVVAGLE----NGGFAVEVDVTKRASVDAAMQKA 80 (263)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHTCT----TCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHh----cCCeEEEEeCCCHHHHHHHHHHH
Confidence 4579999999999999999999998 899999999999988877663 267889999999999999887
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
++|+||||||..
T Consensus 81 ~~~~g~iD~lv~~Ag~~ 97 (263)
T 3ak4_A 81 IDALGGFDLLCANAGVS 97 (263)
T ss_dssp HHHHTCCCEEEECCCCC
T ss_pred HHHcCCCCEEEECCCcC
Confidence 789999999964
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.20 E-value=1.1e-11 Score=120.62 Aligned_cols=80 Identities=15% Similarity=0.042 Sum_probs=71.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||+++++.|+++| ++|++++|+.++++++.++++ .++.++.+|++|+++++++++
T Consensus 29 gk~vlVTGas~gIG~aia~~la~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~ 97 (277)
T 3gvc_A 29 GKVAIVTGAGAGIGLAVARRLADEG-------CHVLCADIDGDAADAAATKIG----CGAAACRVDVSDEQQIIAMVDAC 97 (277)
T ss_dssp TCEEEETTTTSTHHHHHHHHHHHTT-------CEEEEEESSHHHHHHHHHHHC----SSCEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHcC----CcceEEEecCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 899999999999999888873 468899999999999988876
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
+.|+||||||...
T Consensus 98 ~~~~g~iD~lvnnAg~~~ 115 (277)
T 3gvc_A 98 VAAFGGVDKLVANAGVVH 115 (277)
T ss_dssp HHHHSSCCEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 6799999999753
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=7.3e-12 Score=121.61 Aligned_cols=83 Identities=18% Similarity=0.177 Sum_probs=70.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||++++++|+++| ++|++++|+.+++++..+++......++.++.+|++|+++++++++
T Consensus 27 ~k~~lVTGas~GIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 99 (277)
T 4fc7_A 27 DKVAFITGGGSGIGFRIAEIFMRHG-------CHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQA 99 (277)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTT-------CEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 4579999999999999999999998 8999999999988877766521013467899999999999998887
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
+.|+||||||..
T Consensus 100 ~~~~g~id~lv~nAg~~ 116 (277)
T 4fc7_A 100 LKEFGRIDILINCAAGN 116 (277)
T ss_dssp HHHHSCCCEEEECCCCC
T ss_pred HHHcCCCCEEEECCcCC
Confidence 689999999954
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.20 E-value=8.2e-11 Score=111.56 Aligned_cols=82 Identities=16% Similarity=0.099 Sum_probs=70.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..++|+||+|++|++++++|+++| ++|++.+|+.++++++.+++......++.++.+|++|+++++++++
T Consensus 3 k~vlItGasggiG~~~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 75 (250)
T 2cfc_A 3 RVAIVTGASSGNGLAIATRFLARG-------DRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATM 75 (250)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 7999999999998888776621112457889999999999998887
Q ss_pred ----CccEEeecCCCC
Q 012947 88 ----QTKLLLNCVGPY 99 (452)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (452)
++|+||||||..
T Consensus 76 ~~~~~id~li~~Ag~~ 91 (250)
T 2cfc_A 76 EQFGAIDVLVNNAGIT 91 (250)
T ss_dssp HHHSCCCEEEECCCCC
T ss_pred HHhCCCCEEEECCCCC
Confidence 789999999964
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.20 E-value=3.1e-11 Score=117.59 Aligned_cols=84 Identities=18% Similarity=0.186 Sum_probs=69.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||+++++.|+++| ++|++++|+.++++++.+++.......+.++.+|++|+++++++++
T Consensus 33 gk~~lVTGas~GIG~aia~~la~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 105 (281)
T 4dry_A 33 GRIALVTGGGTGVGRGIAQALSAEG-------YSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAV 105 (281)
T ss_dssp -CEEEETTTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 4579999999999999999999998 8999999999998887776631011234789999999999998876
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
+.|+||||||...
T Consensus 106 ~~~~g~iD~lvnnAG~~~ 123 (281)
T 4dry_A 106 RAEFARLDLLVNNAGSNV 123 (281)
T ss_dssp HHHHSCCSEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 5699999999643
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.20 E-value=2.5e-11 Score=116.29 Aligned_cols=82 Identities=12% Similarity=0.104 Sum_probs=70.1
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhH--HHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR--VKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~k--l~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
..++||||+|+||+.++++|+++| ++|++.+|+.++ ++++.+++.. ...++.++.+|++|+++++++++
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~ 74 (258)
T 3a28_C 3 KVAMVTGGAQGIGRGISEKLAADG-------FDIAVADLPQQEEQAAETIKLIEA-ADQKAVFVGLDVTDKANFDSAIDE 74 (258)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHT-------CEEEEEECGGGHHHHHHHHHHHHT-TTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCcchHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHH
Confidence 479999999999999999999998 899999999888 7777766632 13467889999999999998887
Q ss_pred ------CccEEeecCCCCC
Q 012947 88 ------QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (452)
+.|+||||||...
T Consensus 75 ~~~~~g~iD~lv~nAg~~~ 93 (258)
T 3a28_C 75 AAEKLGGFDVLVNNAGIAQ 93 (258)
T ss_dssp HHHHHTCCCEEEECCCCCC
T ss_pred HHHHhCCCCEEEECCCCCC
Confidence 7899999999643
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=2.9e-11 Score=110.60 Aligned_cols=76 Identities=14% Similarity=0.252 Sum_probs=66.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
++|+|+||||++|++++++|++++ ++|.+.+|+.++++.. ...++.++.+|++|++++.++++++|
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g-------~~V~~~~r~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~~d 69 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAG-------YEVTVLVRDSSRLPSE-------GPRPAHVVVGDVLQAADVDKTVAGQD 69 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEESCGGGSCSS-------SCCCSEEEESCTTSHHHHHHHHTTCS
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCC-------CeEEEEEeChhhcccc-------cCCceEEEEecCCCHHHHHHHHcCCC
Confidence 689999999999999999999998 7999999998775321 13468899999999999999999999
Q ss_pred EEeecCCCCC
Q 012947 91 LLLNCVGPYR 100 (452)
Q Consensus 91 vVIn~aGp~~ 100 (452)
+||||+|+..
T Consensus 70 ~vi~~a~~~~ 79 (206)
T 1hdo_A 70 AVIVLLGTRN 79 (206)
T ss_dssp EEEECCCCTT
T ss_pred EEEECccCCC
Confidence 9999998653
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.20 E-value=1e-11 Score=117.71 Aligned_cols=78 Identities=18% Similarity=0.230 Sum_probs=70.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..++||||+|+||++++++|+++| ++|++++|+.++++++.++++ .++.++.+|++|+++++++++
T Consensus 4 k~vlVTGas~GIG~a~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~ 72 (235)
T 3l6e_A 4 GHIIVTGAGSGLGRALTIGLVERG-------HQVSMMGRRYQRLQQQELLLG----NAVIGIVADLAHHEDVDVAFAAAV 72 (235)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHG----GGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHhc----CCceEEECCCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 899999999999998888773 357889999999999998876
Q ss_pred ----CccEEeecCCCC
Q 012947 88 ----QTKLLLNCVGPY 99 (452)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (452)
+.|+||||||..
T Consensus 73 ~~~g~id~lvnnAg~~ 88 (235)
T 3l6e_A 73 EWGGLPELVLHCAGTG 88 (235)
T ss_dssp HHHCSCSEEEEECCCC
T ss_pred HhcCCCcEEEECCCCC
Confidence 579999999964
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.20 E-value=8.2e-11 Score=112.20 Aligned_cols=83 Identities=14% Similarity=0.159 Sum_probs=70.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|+||++++++|+++| ++|++++|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 13 ~k~vlItGasggiG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 84 (260)
T 3awd_A 13 NRVAIVTGGAQNIGLACVTALAEAG-------ARVIIADLDEAMATKAVEDLRM-EGHDVSSVVMDVTNTESVQNAVRSV 84 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCceEEEEecCCCHHHHHHHHHHH
Confidence 4579999999999999999999998 8999999999888777666531 13468899999999999998886
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
++|+||||||...
T Consensus 85 ~~~~~~id~vi~~Ag~~~ 102 (260)
T 3awd_A 85 HEQEGRVDILVACAGICI 102 (260)
T ss_dssp HHHHSCCCEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 6899999999643
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.20 E-value=3.1e-11 Score=111.80 Aligned_cols=72 Identities=24% Similarity=0.284 Sum_probs=64.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
|+|+|+||||++|++++++|+++| ++|.+++|+.++++.+. .++.++.+|++|+++ +.+.++|
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g-------~~V~~~~R~~~~~~~~~--------~~~~~~~~D~~d~~~--~~~~~~d 63 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRG-------HEVTAIVRNAGKITQTH--------KDINILQKDIFDLTL--SDLSDQN 63 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCSHHHHHHC--------SSSEEEECCGGGCCH--HHHTTCS
T ss_pred CeEEEEcCCchhHHHHHHHHHhCC-------CEEEEEEcCchhhhhcc--------CCCeEEeccccChhh--hhhcCCC
Confidence 479999999999999999999998 89999999998876542 367899999999887 7889999
Q ss_pred EEeecCCCC
Q 012947 91 LLLNCVGPY 99 (452)
Q Consensus 91 vVIn~aGp~ 99 (452)
+||||+|+.
T Consensus 64 ~vi~~ag~~ 72 (221)
T 3ew7_A 64 VVVDAYGIS 72 (221)
T ss_dssp EEEECCCSS
T ss_pred EEEECCcCC
Confidence 999999974
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=1.1e-10 Score=116.90 Aligned_cols=81 Identities=15% Similarity=0.196 Sum_probs=72.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHc-CCCCCCCce-EEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKL-FNFPSSPIK-SLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~-g~~~~~~~~-~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
+.++|+||||||++|++++++|++. | . +|++.+|++.+.+.+.+++. ..++.++.+|++|.+++.+++
T Consensus 20 ~~k~vlVTGatG~iG~~l~~~L~~~~g-------~~~V~~~~r~~~~~~~~~~~~~---~~~v~~~~~Dl~d~~~l~~~~ 89 (344)
T 2gn4_A 20 DNQTILITGGTGSFGKCFVRKVLDTTN-------AKKIIVYSRDELKQSEMAMEFN---DPRMRFFIGDVRDLERLNYAL 89 (344)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCC-------CSEEEEEESCHHHHHHHHHHHC---CTTEEEEECCTTCHHHHHHHT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhhCC-------CCEEEEEECChhhHHHHHHHhc---CCCEEEEECCCCCHHHHHHHH
Confidence 3468999999999999999999999 7 5 99999999999888877764 357889999999999999999
Q ss_pred cCccEEeecCCCC
Q 012947 87 SQTKLLLNCVGPY 99 (452)
Q Consensus 87 ~~~dvVIn~aGp~ 99 (452)
+++|+|||+||..
T Consensus 90 ~~~D~Vih~Aa~~ 102 (344)
T 2gn4_A 90 EGVDICIHAAALK 102 (344)
T ss_dssp TTCSEEEECCCCC
T ss_pred hcCCEEEECCCCC
Confidence 9999999999864
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.19 E-value=1.8e-11 Score=118.19 Aligned_cols=84 Identities=17% Similarity=0.131 Sum_probs=70.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||++++++|+++| ++|++++|+.++++++.+++......++.++.+|++|+++++++++
T Consensus 21 ~k~~lVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 93 (267)
T 1vl8_A 21 GRVALVTGGSRGLGFGIAQGLAEAG-------CSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAV 93 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 4579999999999999999999998 8999999999988877665510012467788999999999998887
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
++|+||||||...
T Consensus 94 ~~~~g~iD~lvnnAg~~~ 111 (267)
T 1vl8_A 94 KEKFGKLDTVVNAAGINR 111 (267)
T ss_dssp HHHHSCCCEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCcCC
Confidence 6899999999653
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=6.4e-11 Score=112.50 Aligned_cols=83 Identities=18% Similarity=0.086 Sum_probs=71.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..+++|+||+|++|++++++|+++| ++|++.+|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 11 ~~~vlVtGasggiG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 82 (255)
T 1fmc_A 11 GKCAIITGAGAGIGKEIAITFATAG-------ASVVVSDINADAANHVVDEIQQ-LGGQAFACRCDITSEQELSALADFA 82 (255)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHTTT-------CEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCccHHHHHHHHHHHHCC-------CEEEEEcCCHHHHHHHHHHHHH-hCCceEEEEcCCCCHHHHHHHHHHH
Confidence 4689999999999999999999998 8999999999988877766531 13467888999999999999887
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
++|+||||||...
T Consensus 83 ~~~~~~~d~vi~~Ag~~~ 100 (255)
T 1fmc_A 83 ISKLGKVDILVNNAGGGG 100 (255)
T ss_dssp HHHHSSCCEEEECCCCCC
T ss_pred HHhcCCCCEEEECCCCCC
Confidence 8999999999643
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.19 E-value=1.2e-11 Score=119.44 Aligned_cols=84 Identities=13% Similarity=0.202 Sum_probs=71.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~-~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++||||+|+||++++++|+++| ++|++.+|+.++++++.+++.. .....+..+.+|++|+++++++++
T Consensus 10 ~k~~lVTGas~gIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 82 (267)
T 3t4x_A 10 GKTALVTGSTAGIGKAIATSLVAEG-------ANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEK 82 (267)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTT-------CEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHh
Confidence 4679999999999999999999998 8999999999998887776632 112356788999999999998887
Q ss_pred --CccEEeecCCCCC
Q 012947 88 --QTKLLLNCVGPYR 100 (452)
Q Consensus 88 --~~dvVIn~aGp~~ 100 (452)
+.|+||||||...
T Consensus 83 ~g~id~lv~nAg~~~ 97 (267)
T 3t4x_A 83 YPKVDILINNLGIFE 97 (267)
T ss_dssp CCCCSEEEECCCCCC
T ss_pred cCCCCEEEECCCCCC
Confidence 7899999999654
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.19 E-value=2.7e-11 Score=116.76 Aligned_cols=80 Identities=15% Similarity=0.145 Sum_probs=70.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||++++++|+++| ++|++.+|+.++++++.+++. .++.++.+|++|+++++++++
T Consensus 6 ~k~vlITGas~gIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~ 74 (263)
T 2a4k_A 6 GKTILVTGAASGIGRAALDLFAREG-------ASLVAVDREERLLAEAVAALE----AEAIAVVADVSDPKAVEAVFAEA 74 (263)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHTCC----SSEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhc----CceEEEEcCCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 899999999999988887663 467889999999999998876
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
+.|+||||||...
T Consensus 75 ~~~~g~iD~lvnnAg~~~ 92 (263)
T 2a4k_A 75 LEEFGRLHGVAHFAGVAH 92 (263)
T ss_dssp HHHHSCCCEEEEGGGGTT
T ss_pred HHHcCCCcEEEECCCCCC
Confidence 4699999999643
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.19 E-value=1e-11 Score=118.21 Aligned_cols=82 Identities=15% Similarity=0.141 Sum_probs=69.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR-~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++||||+|+||+.++++|+++| ++|++.+| +.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 4 ~k~vlVTGas~giG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~ 75 (246)
T 2uvd_A 4 GKVALVTGASRGIGRAIAIDLAKQG-------ANVVVNYAGNEQKANEVVDEIKK-LGSDAIAVRADVANAEDVTNMVKQ 75 (246)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTT-------CEEEEEESSCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCCHHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHH
Confidence 3579999999999999999999998 89999999 88888877766531 13467889999999999998887
Q ss_pred ------CccEEeecCCCC
Q 012947 88 ------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (452)
++|+||||||..
T Consensus 76 ~~~~~g~id~lv~nAg~~ 93 (246)
T 2uvd_A 76 TVDVFGQVDILVNNAGVT 93 (246)
T ss_dssp HHHHHSCCCEEEECCCCC
T ss_pred HHHHcCCCCEEEECCCCC
Confidence 789999999964
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.19 E-value=1.2e-10 Score=113.10 Aligned_cols=82 Identities=20% Similarity=0.231 Sum_probs=70.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCC---CccEEEEeCCCHHHHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSL---SIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~---~v~~v~~Dl~d~~sl~~~~ 86 (452)
...++||||+|+||++++++|+++| ++|++++|+.++++++.+++.. ... ++.++.+|++|++++++++
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dv~~~~~v~~~~ 77 (280)
T 1xkq_A 6 NKTVIITGSSNGIGRTTAILFAQEG-------ANVTITGRSSERLEETRQIILK-SGVSEKQVNSVVADVTTEDGQDQII 77 (280)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHT-TTCCGGGEEEEECCTTSHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHH-cCCCCcceEEEEecCCCHHHHHHHH
Confidence 3579999999999999999999998 8999999999999888776632 112 5788999999999999887
Q ss_pred c-------CccEEeecCCCC
Q 012947 87 S-------QTKLLLNCVGPY 99 (452)
Q Consensus 87 ~-------~~dvVIn~aGp~ 99 (452)
+ +.|+||||||..
T Consensus 78 ~~~~~~~g~iD~lv~nAg~~ 97 (280)
T 1xkq_A 78 NSTLKQFGKIDVLVNNAGAA 97 (280)
T ss_dssp HHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHhcCCCCEEEECCCCC
Confidence 6 689999999964
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=5.7e-11 Score=113.87 Aligned_cols=82 Identities=11% Similarity=0.094 Sum_probs=70.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||+++++.|+++| ++|++.+|+.++++++.+++.. ...++..+.+|++|+++++++++
T Consensus 14 ~k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 85 (260)
T 2zat_A 14 NKVALVTASTDGIGLAIARRLAQDG-------AHVVVSSRKQENVDRTVATLQG-EGLSVTGTVCHVGKAEDRERLVAMA 85 (260)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 8999999999988877766531 13467788999999999988877
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
++|+||||||..
T Consensus 86 ~~~~g~iD~lv~~Ag~~ 102 (260)
T 2zat_A 86 VNLHGGVDILVSNAAVN 102 (260)
T ss_dssp HHHHSCCCEEEECCCCC
T ss_pred HHHcCCCCEEEECCCCC
Confidence 789999999954
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=1.4e-11 Score=118.63 Aligned_cols=83 Identities=17% Similarity=0.132 Sum_probs=70.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~-~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++||||+|+||+.+++.|+++| ++|++++|+.++++++.+++.. ....++.++.+|++|+++++++++
T Consensus 8 ~k~~lVTGas~GIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 80 (265)
T 3lf2_A 8 EAVAVVTGGSSGIGLATVELLLEAG-------AAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEA 80 (265)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHH
Confidence 4579999999999999999999998 8999999999998888776632 112347889999999999988876
Q ss_pred ------CccEEeecCCCC
Q 012947 88 ------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (452)
+.|+||||||..
T Consensus 81 ~~~~~g~id~lvnnAg~~ 98 (265)
T 3lf2_A 81 CERTLGCASILVNNAGQG 98 (265)
T ss_dssp HHHHHCSCSEEEECCCCC
T ss_pred HHHHcCCCCEEEECCCCC
Confidence 579999999964
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=1e-10 Score=112.60 Aligned_cols=81 Identities=15% Similarity=0.167 Sum_probs=71.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|+||++++++|+++| ++|++++|+.++++++.+++.. ..++.++.+|++|+++++++++
T Consensus 16 ~k~vlITGasggiG~~~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~ 86 (278)
T 2bgk_A 16 DKVAIITGGAGGIGETTAKLFVRYG-------AKVVIADIADDHGQKVCNNIGS--PDVISFVHCDVTKDEDVRNLVDTT 86 (278)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHCC--TTTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEcCChhHHHHHHHHhCC--CCceEEEECCCCCHHHHHHHHHHH
Confidence 4679999999999999999999998 8999999999888888777742 2368899999999999999887
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
++|+||||||..
T Consensus 87 ~~~~~~id~li~~Ag~~ 103 (278)
T 2bgk_A 87 IAKHGKLDIMFGNVGVL 103 (278)
T ss_dssp HHHHSCCCEEEECCCCC
T ss_pred HHHcCCCCEEEECCccc
Confidence 789999999964
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.19 E-value=1.8e-11 Score=119.13 Aligned_cols=81 Identities=20% Similarity=0.129 Sum_probs=68.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR-~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++||||+|+||+++++.|+++| ++|++++| +.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 29 ~k~~lVTGas~GIG~aia~~la~~G-------~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~ 100 (280)
T 4da9_A 29 RPVAIVTGGRRGIGLGIARALAASG-------FDIAITGIGDAEGVAPVIAELSG-LGARVIFLRADLADLSSHQATVDA 100 (280)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCCHHHHHHHHHHHHH-TTCCEEEEECCTTSGGGHHHHHHH
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCC-------CeEEEEeCCCHHHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHH
Confidence 4579999999999999999999998 89999985 78888777766632 23578899999999999998887
Q ss_pred ------CccEEeecCCC
Q 012947 88 ------QTKLLLNCVGP 98 (452)
Q Consensus 88 ------~~dvVIn~aGp 98 (452)
+.|+||||||.
T Consensus 101 ~~~~~g~iD~lvnnAg~ 117 (280)
T 4da9_A 101 VVAEFGRIDCLVNNAGI 117 (280)
T ss_dssp HHHHHSCCCEEEEECC-
T ss_pred HHHHcCCCCEEEECCCc
Confidence 78999999996
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.19 E-value=1.9e-11 Score=118.57 Aligned_cols=84 Identities=12% Similarity=0.110 Sum_probs=69.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC------------hhHHHHHHHHhCCCCCCCccEEEEeC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN------------PTRVKQALQWASPSHSLSIPILTADT 76 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~------------~~kl~~l~~~l~~~~~~~v~~v~~Dl 76 (452)
+...++||||+|+||+++++.|+++| ++|++++|+ .++++++.+.+.. ...++.++.+|+
T Consensus 9 ~~k~~lVTGas~gIG~a~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv 80 (281)
T 3s55_A 9 EGKTALITGGARGMGRSHAVALAEAG-------ADIAICDRCENSDVVGYPLATADDLAETVALVEK-TGRRCISAKVDV 80 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHH-TTCCEEEEECCT
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCC-------CeEEEEeCCccccccccccccHHHHHHHHHHHHh-cCCeEEEEeCCC
Confidence 34689999999999999999999999 899999997 5666665554421 235778899999
Q ss_pred CCHHHHHHHHc-------CccEEeecCCCCC
Q 012947 77 TDPPSLHRLCS-------QTKLLLNCVGPYR 100 (452)
Q Consensus 77 ~d~~sl~~~~~-------~~dvVIn~aGp~~ 100 (452)
+|+++++++++ +.|+||||||...
T Consensus 81 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~ 111 (281)
T 3s55_A 81 KDRAALESFVAEAEDTLGGIDIAITNAGIST 111 (281)
T ss_dssp TCHHHHHHHHHHHHHHHTCCCEEEECCCCCC
T ss_pred CCHHHHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence 99999998887 7899999999653
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.19 E-value=9e-11 Score=113.81 Aligned_cols=81 Identities=23% Similarity=0.198 Sum_probs=71.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc-
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT- 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~- 89 (452)
..++||||+|+||+.++++|+++| ++|++++|+.++++++.+++.. ..++.++.+|++|+++++++++++
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G-------~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~ 92 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAG-------WSLVLTGRREERLQALAGELSA--KTRVLPLTLDVRDRAAMSAAVDNLP 92 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHTT--TSCEEEEECCTTCHHHHHHHHHTCC
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHhhc--CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 579999999999999999999998 8999999999999988887742 246788999999999999998764
Q ss_pred ------cEEeecCCCCC
Q 012947 90 ------KLLLNCVGPYR 100 (452)
Q Consensus 90 ------dvVIn~aGp~~ 100 (452)
|+||||||...
T Consensus 93 ~~~g~iD~lvnnAG~~~ 109 (272)
T 2nwq_A 93 EEFATLRGLINNAGLAL 109 (272)
T ss_dssp GGGSSCCEEEECCCCCC
T ss_pred HHhCCCCEEEECCCCCC
Confidence 99999999643
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.19 E-value=2.1e-11 Score=118.03 Aligned_cols=82 Identities=18% Similarity=0.181 Sum_probs=70.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH---
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC--- 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~--- 86 (452)
...++||||+|+||++++++|+++| ++|++.+|+.++++++.+++.. ...++.++.+|++|++++++++
T Consensus 21 ~k~vlVTGas~gIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 92 (273)
T 1ae1_A 21 GTTALVTGGSKGIGYAIVEELAGLG-------ARVYTCSRNEKELDECLEIWRE-KGLNVEGSVCDLLSRTERDKLMQTV 92 (273)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCcchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCceEEEECCCCCHHHHHHHHHHH
Confidence 4579999999999999999999998 8999999999988877766531 1346788999999999998887
Q ss_pred -----cCccEEeecCCCC
Q 012947 87 -----SQTKLLLNCVGPY 99 (452)
Q Consensus 87 -----~~~dvVIn~aGp~ 99 (452)
.+.|+||||||..
T Consensus 93 ~~~~~g~id~lv~nAg~~ 110 (273)
T 1ae1_A 93 AHVFDGKLNILVNNAGVV 110 (273)
T ss_dssp HHHTTSCCCEEEECCCCC
T ss_pred HHHcCCCCcEEEECCCCC
Confidence 4689999999964
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.18 E-value=7.4e-11 Score=117.63 Aligned_cols=98 Identities=16% Similarity=0.246 Sum_probs=79.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh----hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP----TRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~----~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
.++|+|+||||++|++++++|++++ ++|.++.|+. ++++.+ +.+. ..++.++.+|++|++++.++
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g-------~~V~~l~R~~~~~~~~~~~~-~~l~---~~~v~~~~~Dl~d~~~l~~~ 78 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAH-------RPTYILARPGPRSPSKAKIF-KALE---DKGAIIVYGLINEQEAMEKI 78 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTT-------CCEEEEECSSCCCHHHHHHH-HHHH---HTTCEEEECCTTCHHHHHHH
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCC-------CCEEEEECCCCCChhHHHHH-HHHH---hCCcEEEEeecCCHHHHHHH
Confidence 3589999999999999999999998 7899999976 555432 2221 24789999999999999999
Q ss_pred Hc--CccEEeecCCCCCCC-CHHHHHHHHHhC-CcEE
Q 012947 86 CS--QTKLLLNCVGPYRLH-GDPVAAACVHSG-CDYL 118 (452)
Q Consensus 86 ~~--~~dvVIn~aGp~~~~-~~~vv~ac~~~g-~~yv 118 (452)
++ ++|+|||++|..... ..+++++|.+.+ +..+
T Consensus 79 ~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~ 115 (346)
T 3i6i_A 79 LKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRF 115 (346)
T ss_dssp HHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEE
T ss_pred HhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEE
Confidence 99 999999999974332 368999999998 7533
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.18 E-value=1.7e-11 Score=115.39 Aligned_cols=78 Identities=18% Similarity=0.159 Sum_probs=70.5
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc--
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT-- 89 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~-- 89 (452)
.++|+||+|+||+.++++|+++| ++|++++|+.++++++.+++. .++.++.+|++|+++++++++++
T Consensus 3 ~vlVTGas~gIG~~~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~ 71 (230)
T 3guy_A 3 LIVITGASSGLGAELAKLYDAEG-------KATYLTGRSESKLSTVTNCLS----NNVGYRARDLASHQEVEQLFEQLDS 71 (230)
T ss_dssp CEEEESTTSHHHHHHHHHHHHTT-------CCEEEEESCHHHHHHHHHTCS----SCCCEEECCTTCHHHHHHHHHSCSS
T ss_pred EEEEecCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHh----hccCeEeecCCCHHHHHHHHHHHhh
Confidence 59999999999999999999998 799999999999999888763 57889999999999999999875
Q ss_pred --cEEeecCCCCC
Q 012947 90 --KLLLNCVGPYR 100 (452)
Q Consensus 90 --dvVIn~aGp~~ 100 (452)
|+||||||...
T Consensus 72 ~~d~lv~~Ag~~~ 84 (230)
T 3guy_A 72 IPSTVVHSAGSGY 84 (230)
T ss_dssp CCSEEEECCCCCC
T ss_pred cCCEEEEeCCcCC
Confidence 89999999643
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.18 E-value=2.2e-11 Score=118.20 Aligned_cols=82 Identities=17% Similarity=0.149 Sum_probs=70.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||+.++++|+++| ++|++.+|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 22 ~k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dv~~~~~v~~~~~~~ 93 (277)
T 2rhc_B 22 SEVALVTGATSGIGLEIARRLGKEG-------LRVFVCARGEEGLRTTLKELRE-AGVEADGRTCDVRSVPEIEALVAAV 93 (277)
T ss_dssp SCEEEEETCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCceEEEECCCCCHHHHHHHHHHH
Confidence 4579999999999999999999998 8999999999988877766631 12467889999999999998887
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
++|+||||||..
T Consensus 94 ~~~~g~iD~lv~~Ag~~ 110 (277)
T 2rhc_B 94 VERYGPVDVLVNNAGRP 110 (277)
T ss_dssp HHHTCSCSEEEECCCCC
T ss_pred HHHhCCCCEEEECCCCC
Confidence 689999999964
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.18 E-value=5.8e-11 Score=113.62 Aligned_cols=80 Identities=14% Similarity=0.088 Sum_probs=71.5
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
+...++|+||+|+||++++++|+++| ++|++++|+.++++++.++++ .++.++.+|++|+++++++++
T Consensus 11 ~~k~vlVTGasggiG~~~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~ 79 (265)
T 2o23_A 11 KGLVAVITGGASGLGLATAERLVGQG-------ASAVLLDLPNSGGEAQAKKLG----NNCVFAPADVTSEKDVQTALAL 79 (265)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECTTSSHHHHHHHHC----TTEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCcHhHHHHHHHhC----CceEEEEcCCCCHHHHHHHHHH
Confidence 34689999999999999999999998 899999999999888887773 468889999999999999887
Q ss_pred ------CccEEeecCCCC
Q 012947 88 ------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (452)
++|+||||||..
T Consensus 80 ~~~~~g~id~li~~Ag~~ 97 (265)
T 2o23_A 80 AKGKFGRVDVAVNCAGIA 97 (265)
T ss_dssp HHHHHSCCCEEEECCCCC
T ss_pred HHHHCCCCCEEEECCccC
Confidence 799999999964
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.18 E-value=2.2e-11 Score=115.25 Aligned_cols=82 Identities=22% Similarity=0.261 Sum_probs=70.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCce-------EEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIK-------SLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLH 83 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~-------~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~ 83 (452)
..++|+||+|+||++++++|+++| + +|++.+|+.++++++.+++.. ...++.++.+|++|+++++
T Consensus 3 k~vlITGasggiG~~la~~l~~~G-------~~~~~~~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~ 74 (244)
T 2bd0_A 3 HILLITGAGKGIGRAIALEFARAA-------RHHPDFEPVLVLSSRTAADLEKISLECRA-EGALTDTITADISDMADVR 74 (244)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHT-------TTCTTCCEEEEEEESCHHHHHHHHHHHHT-TTCEEEEEECCTTSHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHhc-------CcccccceEEEEEeCCHHHHHHHHHHHHc-cCCeeeEEEecCCCHHHHH
Confidence 469999999999999999999998 5 899999999998888776632 1346788999999999999
Q ss_pred HHHc-------CccEEeecCCCCC
Q 012947 84 RLCS-------QTKLLLNCVGPYR 100 (452)
Q Consensus 84 ~~~~-------~~dvVIn~aGp~~ 100 (452)
++++ ++|+||||||...
T Consensus 75 ~~~~~~~~~~g~id~li~~Ag~~~ 98 (244)
T 2bd0_A 75 RLTTHIVERYGHIDCLVNNAGVGR 98 (244)
T ss_dssp HHHHHHHHHTSCCSEEEECCCCCC
T ss_pred HHHHHHHHhCCCCCEEEEcCCcCC
Confidence 8887 6899999999653
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.18 E-value=7e-11 Score=114.71 Aligned_cols=81 Identities=16% Similarity=0.175 Sum_probs=70.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||+.++++|+++| ++|++++|+.++++++.+++.. ..++.++.+|++|+++++++++
T Consensus 29 ~k~vlVTGas~gIG~aia~~L~~~G-------~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~Dv~d~~~v~~~~~~~ 99 (276)
T 2b4q_A 29 GRIALVTGGSRGIGQMIAQGLLEAG-------ARVFICARDAEACADTATRLSA--YGDCQAIPADLSSEAGARRLAQAL 99 (276)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEECSCHHHHHHHHHHHTT--SSCEEECCCCTTSHHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh--cCceEEEEeeCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 8999999999999888887742 2267788899999999998886
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
++|+||||||..
T Consensus 100 ~~~~g~iD~lvnnAg~~ 116 (276)
T 2b4q_A 100 GELSARLDILVNNAGTS 116 (276)
T ss_dssp HHHCSCCSEEEECCCCC
T ss_pred HHhcCCCCEEEECCCCC
Confidence 689999999954
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.18 E-value=1.9e-10 Score=108.64 Aligned_cols=78 Identities=14% Similarity=0.081 Sum_probs=68.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..+++||||+|++|++++++|+++| ++|++.+|+.++++++.+++ .++.++.+|++|+++++++++
T Consensus 7 ~~~vlVTGasggiG~~~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~ 74 (244)
T 1cyd_A 7 GLRALVTGAGKGIGRDTVKALHASG-------AKVVAVTRTNSDLVSLAKEC-----PGIEPVCVDLGDWDATEKALGGI 74 (244)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHS-----TTCEEEECCTTCHHHHHHHHTTC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHhc-----cCCCcEEecCCCHHHHHHHHHHc
Confidence 4689999999999999999999998 89999999999888777654 246778999999999999987
Q ss_pred -CccEEeecCCCC
Q 012947 88 -QTKLLLNCVGPY 99 (452)
Q Consensus 88 -~~dvVIn~aGp~ 99 (452)
+.|+||||||..
T Consensus 75 ~~id~vi~~Ag~~ 87 (244)
T 1cyd_A 75 GPVDLLVNNAALV 87 (244)
T ss_dssp CCCSEEEECCCCC
T ss_pred CCCCEEEECCccc
Confidence 479999999954
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.18 E-value=5.7e-11 Score=117.56 Aligned_cols=76 Identities=21% Similarity=0.248 Sum_probs=63.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
.++|+|+|||||+|++++++|+++| ++|++++|+.++.+.+. ..++.++.+|++|++++.++++++
T Consensus 13 ~M~ilVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~l~-------~~~~~~~~~Dl~d~~~~~~~~~~~ 78 (342)
T 2x4g_A 13 HVKYAVLGATGLLGHHAARAIRAAG-------HDLVLIHRPSSQIQRLA-------YLEPECRVAEMLDHAGLERALRGL 78 (342)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEECTTSCGGGGG-------GGCCEEEECCTTCHHHHHHHTTTC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEecChHhhhhhc-------cCCeEEEEecCCCHHHHHHHHcCC
Confidence 3689999999999999999999998 79999999887654321 126789999999999999999999
Q ss_pred cEEeecCCCC
Q 012947 90 KLLLNCVGPY 99 (452)
Q Consensus 90 dvVIn~aGp~ 99 (452)
|+||||||..
T Consensus 79 d~vih~a~~~ 88 (342)
T 2x4g_A 79 DGVIFSAGYY 88 (342)
T ss_dssp SEEEEC----
T ss_pred CEEEECCccC
Confidence 9999999864
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.18 E-value=4.5e-11 Score=116.10 Aligned_cols=82 Identities=21% Similarity=0.236 Sum_probs=70.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCC--CCCCccEEEEeCCCHHHHHHHHc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS--HSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~--~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
...++||||+|+||++++++|+++| ++|++++|+.++++++.+++... ...++.++.+|++|+++++++++
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 83 (281)
T 3svt_A 11 DRTYLVTGGGSGIGKGVAAGLVAAG-------ASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVD 83 (281)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHH
Confidence 4579999999999999999999998 89999999999998888777431 11267888999999999998887
Q ss_pred -------CccEEeecCCC
Q 012947 88 -------QTKLLLNCVGP 98 (452)
Q Consensus 88 -------~~dvVIn~aGp 98 (452)
+.|+||||||.
T Consensus 84 ~~~~~~g~id~lv~nAg~ 101 (281)
T 3svt_A 84 AVTAWHGRLHGVVHCAGG 101 (281)
T ss_dssp HHHHHHSCCCEEEECCCC
T ss_pred HHHHHcCCCCEEEECCCc
Confidence 57999999996
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.18 E-value=5e-11 Score=115.41 Aligned_cols=113 Identities=12% Similarity=0.064 Sum_probs=81.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC------------hhHHHHHHHHhCCCCCCCccEEEEeC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN------------PTRVKQALQWASPSHSLSIPILTADT 76 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~------------~~kl~~l~~~l~~~~~~~v~~v~~Dl 76 (452)
+...++||||+|+||+++++.|+++| ++|++++|+ .++++++.+++.. ...++.++.+|+
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~ 83 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAADG-------ADIIAVDLCDQIASVPYPLATPEELAATVKLVED-IGSRIVARQADV 83 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHH-HTCCEEEEECCT
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCC-------CeEEEEecccccccccccccchHHHHHHHHHHHh-cCCeEEEEeCCC
Confidence 34679999999999999999999998 899999987 6777666554421 135788999999
Q ss_pred CCHHHHHHHHc-------CccEEeecCCCCCCCC-HHHHHHHHHhCCcEEEecCcHHHHHHHHHHH
Q 012947 77 TDPPSLHRLCS-------QTKLLLNCVGPYRLHG-DPVAAACVHSGCDYLDISGEPEFMERMEARY 134 (452)
Q Consensus 77 ~d~~sl~~~~~-------~~dvVIn~aGp~~~~~-~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~ 134 (452)
+|+++++++++ +.|+||||||...... ..-.+...+ +++.|....++...+.+
T Consensus 84 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~-----~N~~g~~~l~~~~~~~~ 144 (278)
T 3sx2_A 84 RDRESLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVID-----VNLTGVYHTIKVAIPTL 144 (278)
T ss_dssp TCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHH-----HHTHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHH-----HHhHHHHHHHHHHHHHH
Confidence 99999999887 7899999999754322 122222222 34445555555554433
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.18 E-value=9e-11 Score=112.78 Aligned_cols=82 Identities=16% Similarity=0.109 Sum_probs=70.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||++++++|+++| ++|++.+|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 78 (262)
T 1zem_A 7 GKVCLVTGAGGNIGLATALRLAEEG-------TAIALLDMNREALEKAEASVRE-KGVEARSYVCDVTSEEAVIGTVDSV 78 (262)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHT-TTSCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 8999999999998887777632 13467888999999999988776
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
+.|+||||||..
T Consensus 79 ~~~~g~id~lv~nAg~~ 95 (262)
T 1zem_A 79 VRDFGKIDFLFNNAGYQ 95 (262)
T ss_dssp HHHHSCCCEEEECCCCC
T ss_pred HHHhCCCCEEEECCCCC
Confidence 789999999964
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.17 E-value=2.5e-11 Score=116.61 Aligned_cols=85 Identities=16% Similarity=0.140 Sum_probs=72.4
Q ss_pred CCCeEEEEcCCc-hHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 9 ELFDVIILGASG-FTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 9 ~~~~ilV~GATG-~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
+...++||||+| +||+.++++|+++| ++|++.+|+.++++++.+++......++.++.+|++|+++++++++
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~ 93 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEG-------ADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALIT 93 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCC-------CEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHH
Confidence 346799999997 69999999999998 8999999999999888887743223578899999999999998876
Q ss_pred -------CccEEeecCCCCC
Q 012947 88 -------QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -------~~dvVIn~aGp~~ 100 (452)
+.|+||||||...
T Consensus 94 ~~~~~~g~id~li~~Ag~~~ 113 (266)
T 3o38_A 94 QTVEKAGRLDVLVNNAGLGG 113 (266)
T ss_dssp HHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHhCCCcEEEECCCcCC
Confidence 5799999999643
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.17 E-value=3.3e-11 Score=114.97 Aligned_cols=80 Identities=16% Similarity=0.217 Sum_probs=67.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh-hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~-~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++||||+|+||+.+++.|+++| ++|++.+|+. +++++..++. ..++.++.+|++|+++++++++
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~ 75 (249)
T 2ew8_A 7 DKLAVITGGANGIGRAIAERFAVEG-------ADIAIADLVPAPEAEAAIRNL----GRRVLTVKCDVSQPGDVEAFGKQ 75 (249)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESSCCHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEcCCchhHHHHHHHhc----CCcEEEEEeecCCHHHHHHHHHH
Confidence 3579999999999999999999998 8999999998 7776644443 2467889999999999988865
Q ss_pred ------CccEEeecCCCCC
Q 012947 88 ------QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (452)
++|+||||||...
T Consensus 76 ~~~~~g~id~lv~nAg~~~ 94 (249)
T 2ew8_A 76 VISTFGRCDILVNNAGIYP 94 (249)
T ss_dssp HHHHHSCCCEEEECCCCCC
T ss_pred HHHHcCCCCEEEECCCCCC
Confidence 7899999999643
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.17 E-value=1.4e-11 Score=116.95 Aligned_cols=83 Identities=14% Similarity=0.083 Sum_probs=71.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||++++++|+++| ++|++.+|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 5 ~k~vlITGas~gIG~~~a~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 76 (247)
T 3lyl_A 5 EKVALVTGASRGIGFEVAHALASKG-------ATVVGTATSQASAEKFENSMKE-KGFKARGLVLNISDIESIQNFFAEI 76 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTT-------CEEEEEESSHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCceEEEEecCCCHHHHHHHHHHH
Confidence 4579999999999999999999998 8999999999998887776632 23578899999999999998876
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
+.|+||||||...
T Consensus 77 ~~~~~~id~li~~Ag~~~ 94 (247)
T 3lyl_A 77 KAENLAIDILVNNAGITR 94 (247)
T ss_dssp HHTTCCCSEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 4699999999653
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.17 E-value=2.7e-11 Score=117.09 Aligned_cols=96 Identities=21% Similarity=0.257 Sum_probs=76.5
Q ss_pred eEEEEcCCchHHHHHHHHHHHc--CCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 12 DVIILGASGFTGKYVVREALKL--FNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~--g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
+|+|+|||||+|++++++|+++ + ++|.+.+|+.++.+.+.. .++.++.+|++|++++.++++++
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~~g-------~~V~~~~r~~~~~~~l~~-------~~~~~~~~D~~d~~~l~~~~~~~ 67 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKKVPA-------SQIIAIVRNVEKASTLAD-------QGVEVRHGDYNQPESLQKAFAGV 67 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTTSCG-------GGEEEEESCTTTTHHHHH-------TTCEEEECCTTCHHHHHHHTTTC
T ss_pred eEEEEcCCchHHHHHHHHHHHhCCC-------CeEEEEEcCHHHHhHHhh-------cCCeEEEeccCCHHHHHHHHhcC
Confidence 6999999999999999999998 6 799999999887765533 35789999999999999999999
Q ss_pred cEEeecCCCCCC------CCHHHHHHHHHhCC-cEEEec
Q 012947 90 KLLLNCVGPYRL------HGDPVAAACVHSGC-DYLDIS 121 (452)
Q Consensus 90 dvVIn~aGp~~~------~~~~vv~ac~~~g~-~yvDls 121 (452)
|+|||++|+... ...+++++|.+.++ ++|.++
T Consensus 68 d~vi~~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~S 106 (287)
T 2jl1_A 68 SKLLFISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTG 106 (287)
T ss_dssp SEEEECCCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred CEEEEcCCCCcCchHHHHHHHHHHHHHHHcCCCEEEEEC
Confidence 999999986321 01345666666665 455554
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.17 E-value=1.1e-10 Score=114.05 Aligned_cols=95 Identities=19% Similarity=0.255 Sum_probs=76.1
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC-----hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-----PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~-----~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
++|+|+||||++|++++++|++++ ++|.+++|+ +++.+.+ +.+. ..++.++.+|++|++++.++
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g-------~~V~~~~R~~~~~~~~~~~~~-~~~~---~~~~~~~~~D~~d~~~l~~~ 73 (313)
T 1qyd_A 5 SRVLIVGGTGYIGKRIVNASISLG-------HPTYVLFRPEVVSNIDKVQML-LYFK---QLGAKLIEASLDDHQRLVDA 73 (313)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTT-------CCEEEECCSCCSSCHHHHHHH-HHHH---TTTCEEECCCSSCHHHHHHH
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCC-------CcEEEEECCCcccchhHHHHH-HHHH---hCCeEEEeCCCCCHHHHHHH
Confidence 579999999999999999999998 789999998 4454433 2221 24688999999999999999
Q ss_pred HcCccEEeecCCCCCC-----CCHHHHHHHHHhC-Cc
Q 012947 86 CSQTKLLLNCVGPYRL-----HGDPVAAACVHSG-CD 116 (452)
Q Consensus 86 ~~~~dvVIn~aGp~~~-----~~~~vv~ac~~~g-~~ 116 (452)
++++|+|||++|+... ...+++++|.+.| +.
T Consensus 74 ~~~~d~vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~ 110 (313)
T 1qyd_A 74 LKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIK 110 (313)
T ss_dssp HTTCSEEEECCCCSSSSTTTTTHHHHHHHHHHSCCCS
T ss_pred HhCCCEEEECCccccchhhHHHHHHHHHHHHhcCCCc
Confidence 9999999999987521 2256777777777 53
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.17 E-value=9.1e-12 Score=120.67 Aligned_cols=83 Identities=14% Similarity=0.044 Sum_probs=71.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||+.+++.|+++| ++|++.+|+.++++++.+++.. ...++..+.+|++|+++++++++
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~ 99 (270)
T 3ftp_A 28 KQVAIVTGASRGIGRAIALELARRG-------AMVIGTATTEAGAEGIGAAFKQ-AGLEGRGAVLNVNDATAVDALVEST 99 (270)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTT-------CEEEEEESSHHHHHHHHHHHHH-HTCCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEEeCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 8999999999998887766532 13467889999999999998887
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
+.|+||||||...
T Consensus 100 ~~~~g~iD~lvnnAg~~~ 117 (270)
T 3ftp_A 100 LKEFGALNVLVNNAGITQ 117 (270)
T ss_dssp HHHHSCCCEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 7899999999643
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.17 E-value=6.8e-11 Score=115.59 Aligned_cols=116 Identities=16% Similarity=0.130 Sum_probs=83.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~-~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++||||+|+||+.+++.|+++|.. ..+|++.+|+.++++++.+++.. ....++.++.+|++|+++++++++
T Consensus 33 ~k~~lVTGas~GIG~aia~~l~~~G~~----~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 108 (287)
T 3rku_A 33 KKTVLITGASAGIGKATALEYLEASNG----DMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIEN 108 (287)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHHHTT----CSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHT
T ss_pred CCEEEEecCCChHHHHHHHHHHHcCCC----CceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHH
Confidence 357999999999999999999998710 13999999999999888777632 013467889999999999999987
Q ss_pred ------CccEEeecCCCCCCC------CHHHHHHHHHhCCcEEEecCcHHHHHHHHHHH
Q 012947 88 ------QTKLLLNCVGPYRLH------GDPVAAACVHSGCDYLDISGEPEFMERMEARY 134 (452)
Q Consensus 88 ------~~dvVIn~aGp~~~~------~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~ 134 (452)
+.|+||||||..... ...-.+...+ +++.|....++..++.+
T Consensus 109 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~-----vN~~g~~~l~~~~~~~m 162 (287)
T 3rku_A 109 LPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFD-----TNVTALINITQAVLPIF 162 (287)
T ss_dssp SCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHH-----HHTHHHHHHHHHHHHHH
T ss_pred HHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHH-----HHHHHHHHHHHHHHHHH
Confidence 479999999964311 2223333333 34445555566654443
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.17 E-value=2.1e-10 Score=108.39 Aligned_cols=78 Identities=17% Similarity=0.111 Sum_probs=68.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|+||++++++|+++| ++|++.+|+.++++++.+++. ++.++.+|++|+++++++++
T Consensus 7 ~k~vlITGasggiG~~~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~ 74 (244)
T 3d3w_A 7 GRRVLVTGAGKGIGRGTVQALHATG-------ARVVAVSRTQADLDSLVRECP-----GIEPVCVDLGDWEATERALGSV 74 (244)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHST-----TCEEEECCTTCHHHHHHHHTTC
T ss_pred CcEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHcC-----CCCEEEEeCCCHHHHHHHHHHc
Confidence 4579999999999999999999998 799999999999888777652 46778999999999999987
Q ss_pred -CccEEeecCCCC
Q 012947 88 -QTKLLLNCVGPY 99 (452)
Q Consensus 88 -~~dvVIn~aGp~ 99 (452)
+.|+||||||..
T Consensus 75 ~~id~vi~~Ag~~ 87 (244)
T 3d3w_A 75 GPVDLLVNNAAVA 87 (244)
T ss_dssp CCCCEEEECCCCC
T ss_pred CCCCEEEECCccC
Confidence 479999999964
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.17 E-value=2.3e-11 Score=116.65 Aligned_cols=83 Identities=18% Similarity=0.171 Sum_probs=70.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~-~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++||||+|+||+++++.|+++| ++|++.+|+.++++++.+++... ...++.++.+|++|+++++++++
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 79 (260)
T 2z1n_A 7 GKLAVVTAGSSGLGFASALELARNG-------ARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEK 79 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHH
Confidence 3579999999999999999999998 89999999999888877665310 01267889999999999999887
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
++|+||||||..
T Consensus 80 ~~~~~gid~lv~~Ag~~ 96 (260)
T 2z1n_A 80 ARDLGGADILVYSTGGP 96 (260)
T ss_dssp HHHTTCCSEEEECCCCC
T ss_pred HHHhcCCCEEEECCCCC
Confidence 589999999954
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.17 E-value=1e-10 Score=110.91 Aligned_cols=84 Identities=14% Similarity=0.103 Sum_probs=70.2
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeC--CCHHHHHHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADT--TDPPSLHRLC 86 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl--~d~~sl~~~~ 86 (452)
+...++||||+|+||++++++|+++| ++|++++|+.++++++.+++......++.++.+|+ +|.+++++++
T Consensus 13 ~~k~vlITGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~ 85 (247)
T 3i1j_A 13 KGRVILVTGAARGIGAAAARAYAAHG-------ASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELA 85 (247)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCC-------CEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHH
Confidence 45679999999999999999999998 89999999999998887776421224567888888 8998888877
Q ss_pred c-------CccEEeecCCCC
Q 012947 87 S-------QTKLLLNCVGPY 99 (452)
Q Consensus 87 ~-------~~dvVIn~aGp~ 99 (452)
+ +.|+||||||..
T Consensus 86 ~~~~~~~g~id~lv~nAg~~ 105 (247)
T 3i1j_A 86 ARVEHEFGRLDGLLHNASII 105 (247)
T ss_dssp HHHHHHHSCCSEEEECCCCC
T ss_pred HHHHHhCCCCCEEEECCccC
Confidence 6 689999999964
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.17 E-value=6.5e-11 Score=117.83 Aligned_cols=142 Identities=15% Similarity=0.172 Sum_probs=91.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC-----hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-----PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~-----~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
..++||||+|+||+.+++.|+++| ++|++..|+ .++++++.+.+.. ...++.++.+|++|+++++++
T Consensus 6 k~vlVTGas~GIG~aia~~L~~~G-------~~V~~~~r~~~~r~~~~~~~l~~~~~~-~~~~~~~~~~Dvtd~~~v~~~ 77 (324)
T 3u9l_A 6 KIILITGASSGFGRLTAEALAGAG-------HRVYASMRDIVGRNASNVEAIAGFARD-NDVDLRTLELDVQSQVSVDRA 77 (324)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTT-------CEEEEEESCTTTTTHHHHHHHHHHHHH-HTCCEEEEECCTTCHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-------CEEEEecCcccccCHHHHHHHHHHHHh-cCCcEEEEEeecCCHHHHHHH
Confidence 579999999999999999999998 899987765 5566655544321 134688999999999999998
Q ss_pred Hc-------CccEEeecCCCCCC-----CCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccE-EEcC-CCC
Q 012947 86 CS-------QTKLLLNCVGPYRL-----HGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSL-LVSA-CGF 151 (452)
Q Consensus 86 ~~-------~~dvVIn~aGp~~~-----~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~-iv~~-~G~ 151 (452)
++ ++|+||||||.... ....-.+...+ +++.|....++...+.+. .++.|.+ .+++ ++.
T Consensus 78 ~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~-----vN~~g~~~l~~a~lp~m~--~~~~g~iV~isS~~~~ 150 (324)
T 3u9l_A 78 IDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYD-----INVLSTQRVNRAALPHMR--RQKHGLLIWISSSSSA 150 (324)
T ss_dssp HHHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHH-----HHTHHHHHHHHHHHHHHH--HHTCEEEEEECCGGGT
T ss_pred HHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHH-----HHhHHHHHHHHHHHHHHH--hcCCCEEEEEecchhc
Confidence 87 78999999995422 12222333332 344455555566544332 2333433 3333 333
Q ss_pred CcchhhHHHHHHhhhc
Q 012947 152 DSIPAELGVMFNSRQW 167 (452)
Q Consensus 152 ~s~P~dl~~~~~~~~~ 167 (452)
...+.....|.++|..
T Consensus 151 ~~~~~~~~~Y~asKaa 166 (324)
T 3u9l_A 151 GGTPPYLAPYFAAKAA 166 (324)
T ss_dssp SCCCSSCHHHHHHHHH
T ss_pred cCCCCcchhHHHHHHH
Confidence 2333345556555443
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=2e-10 Score=109.05 Aligned_cols=80 Identities=20% Similarity=0.194 Sum_probs=69.5
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCc-cEEEEeCCCHHHHHHHHc
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSI-PILTADTTDPPSLHRLCS 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v-~~v~~Dl~d~~sl~~~~~ 87 (452)
....++||||+|++|++++++|+++| ++|++.+|+.++++++.++++ .++ .++.+|++|+++++++++
T Consensus 10 ~~k~vlITGasggiG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~ 78 (254)
T 2wsb_A 10 DGACAAVTGAGSGIGLEICRAFAASG-------ARLILIDREAAALDRAAQELG----AAVAARIVADVTDAEAMTAAAA 78 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHG----GGEEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhc----ccceeEEEEecCCHHHHHHHHH
Confidence 34679999999999999999999998 899999999999888877763 345 788999999999988874
Q ss_pred ------CccEEeecCCCC
Q 012947 88 ------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (452)
+.|+||||||..
T Consensus 79 ~~~~~~~id~li~~Ag~~ 96 (254)
T 2wsb_A 79 EAEAVAPVSILVNSAGIA 96 (254)
T ss_dssp HHHHHSCCCEEEECCCCC
T ss_pred HHHhhCCCcEEEECCccC
Confidence 689999999964
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.16 E-value=9.5e-11 Score=111.64 Aligned_cols=82 Identities=15% Similarity=0.135 Sum_probs=71.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||++++++|+++| ++|++++|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 9 ~k~vlITGas~giG~~~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (253)
T 3qiv_A 9 NKVGIVTGSGGGIGQAYAEALAREG-------AAVVVADINAEAAEAVAKQIVA-DGGTAISVAVDVSDPESAKAMADRT 80 (253)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHH-TTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC-------CEEEEEcCCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHH
Confidence 4679999999999999999999998 8999999999999888777632 23467889999999999998887
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
+.|+||||||.+
T Consensus 81 ~~~~g~id~li~~Ag~~ 97 (253)
T 3qiv_A 81 LAEFGGIDYLVNNAAIF 97 (253)
T ss_dssp HHHHSCCCEEEECCCCC
T ss_pred HHHcCCCCEEEECCCcC
Confidence 789999999963
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=1.3e-11 Score=117.46 Aligned_cols=82 Identities=13% Similarity=0.160 Sum_probs=68.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR-~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..++||||+|+||++++++|+++| ++|++.+| +.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 5 k~~lVTGas~gIG~~ia~~l~~~G-------~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~ 76 (246)
T 3osu_A 5 KSALVTGASRGIGRSIALQLAEEG-------YNVAVNYAGSKEKAEAVVEEIKA-KGVDSFAIQANVADADEVKAMIKEV 76 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT-------CEEEEEESSCHHHHHHHHHHHHH-TTSCEEEEECCTTCHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHH
Confidence 579999999999999999999998 79988877 66777777666532 23467889999999999998887
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
+.|+||||||...
T Consensus 77 ~~~~g~id~lv~nAg~~~ 94 (246)
T 3osu_A 77 VSQFGSLDVLVNNAGITR 94 (246)
T ss_dssp HHHHSCCCEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 7899999999653
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.16 E-value=3.7e-11 Score=117.99 Aligned_cols=82 Identities=23% Similarity=0.263 Sum_probs=70.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCC---CccEEEEeCCCHHHHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSL---SIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~---~v~~v~~Dl~d~~sl~~~~ 86 (452)
...++||||+|+||+.+++.|+++| ++|++++|+.++++++.+++.. ... ++.++.+|++|++++++++
T Consensus 26 ~k~vlVTGas~gIG~aia~~L~~~G-------~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~~~~Dv~d~~~v~~~~ 97 (297)
T 1xhl_A 26 GKSVIITGSSNGIGRSAAVIFAKEG-------AQVTITGRNEDRLEETKQQILK-AGVPAEKINAVVADVTEASGQDDII 97 (297)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHH-TTCCGGGEEEEECCTTSHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCCCceEEEEecCCCCHHHHHHHH
Confidence 4579999999999999999999998 8999999999998887766631 112 5788999999999999888
Q ss_pred c-------CccEEeecCCCC
Q 012947 87 S-------QTKLLLNCVGPY 99 (452)
Q Consensus 87 ~-------~~dvVIn~aGp~ 99 (452)
+ ++|+||||||..
T Consensus 98 ~~~~~~~g~iD~lvnnAG~~ 117 (297)
T 1xhl_A 98 NTTLAKFGKIDILVNNAGAN 117 (297)
T ss_dssp HHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHhcCCCCEEEECCCcC
Confidence 7 689999999964
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.16 E-value=2.4e-11 Score=115.38 Aligned_cols=81 Identities=17% Similarity=0.151 Sum_probs=70.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|++|+.++++|+++| ++|++.+|+.++++++.+++.. ..++.++.+|++|+++++++++
T Consensus 6 ~k~vlVtGasggiG~~~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~ 76 (251)
T 1zk4_A 6 GKVAIITGGTLGIGLAIATKFVEEG-------AKVMITGRHSDVGEKAAKSVGT--PDQIQFFQHDSSDEDGWTKLFDAT 76 (251)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHCC--TTTEEEEECCTTCHHHHHHHHHHH
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhhc--cCceEEEECCCCCHHHHHHHHHHH
Confidence 4579999999999999999999998 8999999999998888777742 2467889999999999998887
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
++|+||||||..
T Consensus 77 ~~~~~~id~li~~Ag~~ 93 (251)
T 1zk4_A 77 EKAFGPVSTLVNNAGIA 93 (251)
T ss_dssp HHHHSSCCEEEECCCCC
T ss_pred HHHhCCCCEEEECCCCC
Confidence 489999999964
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.16 E-value=3.6e-11 Score=116.51 Aligned_cols=83 Identities=13% Similarity=0.113 Sum_probs=69.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec-------------ChhHHHHHHHHhCCCCCCCccEEEEeC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-------------NPTRVKQALQWASPSHSLSIPILTADT 76 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR-------------~~~kl~~l~~~l~~~~~~~v~~v~~Dl 76 (452)
...++||||+|+||+++++.|+++| ++|++++| +.++++++.+++.. ...++.++.+|+
T Consensus 11 ~k~~lVTGas~GIG~a~a~~la~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~ 82 (277)
T 3tsc_A 11 GRVAFITGAARGQGRAHAVRMAAEG-------ADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEA-ANRRIVAAVVDT 82 (277)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHH-TTCCEEEEECCT
T ss_pred CCEEEEECCccHHHHHHHHHHHHcC-------CEEEEEeccccccccccccccCHHHHHHHHHHHHh-cCCeEEEEECCC
Confidence 4579999999999999999999999 89999998 67777777665532 235678899999
Q ss_pred CCHHHHHHHHc-------CccEEeecCCCCC
Q 012947 77 TDPPSLHRLCS-------QTKLLLNCVGPYR 100 (452)
Q Consensus 77 ~d~~sl~~~~~-------~~dvVIn~aGp~~ 100 (452)
+|+++++++++ +.|+||||||...
T Consensus 83 ~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~ 113 (277)
T 3tsc_A 83 RDFDRLRKVVDDGVAALGRLDIIVANAGVAA 113 (277)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 99999998876 5899999999654
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=2.8e-11 Score=116.06 Aligned_cols=84 Identities=13% Similarity=0.132 Sum_probs=69.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhH-HHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR-VKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~k-l~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++||||+|+||++++++|+++| ++|++.+|+.++ ++++.+++......++.++.+|++|+++++++++
T Consensus 4 ~k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 76 (260)
T 1x1t_A 4 GKVAVVTGSTSGIGLGIATALAAQG-------ADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDN 76 (260)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTT-------CEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHcC-------CEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHH
Confidence 3579999999999999999999998 899999999888 7777665521002357788999999999998887
Q ss_pred ------CccEEeecCCCCC
Q 012947 88 ------QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (452)
++|+||||||...
T Consensus 77 ~~~~~g~iD~lv~~Ag~~~ 95 (260)
T 1x1t_A 77 AVRQMGRIDILVNNAGIQH 95 (260)
T ss_dssp HHHHHSCCSEEEECCCCCC
T ss_pred HHHhcCCCCEEEECCCCCC
Confidence 6899999999643
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.16 E-value=1.5e-11 Score=118.89 Aligned_cols=77 Identities=22% Similarity=0.151 Sum_probs=66.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||+.+++.|+++| ++|++++|+.++++++. ..++.++.+|++|+++++++++
T Consensus 16 ~k~vlVTGas~gIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~-------~~~~~~~~~Dv~d~~~v~~~~~~~ 81 (266)
T 3p19_A 16 KKLVVITGASSGIGEAIARRFSEEG-------HPLLLLARRVERLKALN-------LPNTLCAQVDVTDKYTFDTAITRA 81 (266)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT-------CCEEEEESCHHHHHTTC-------CTTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHhh-------cCCceEEEecCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 89999999998875432 2367889999999999998887
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
++|+||||||...
T Consensus 82 ~~~~g~iD~lvnnAg~~~ 99 (266)
T 3p19_A 82 EKIYGPADAIVNNAGMML 99 (266)
T ss_dssp HHHHCSEEEEEECCCCCC
T ss_pred HHHCCCCCEEEECCCcCC
Confidence 7899999999653
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.16 E-value=7.9e-11 Score=118.30 Aligned_cols=78 Identities=17% Similarity=0.208 Sum_probs=67.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHc-CCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCC-CHHHHHHHHc
Q 012947 10 LFDVIILGASGFTGKYVVREALKL-FNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTT-DPPSLHRLCS 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~-g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~-d~~sl~~~~~ 87 (452)
.++|+|+|||||+|++++++|+++ + ++|++++|+.++++.+.+ ..++.++.+|++ |.+++.++++
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~~g-------~~V~~~~r~~~~~~~~~~------~~~v~~~~~Dl~~d~~~~~~~~~ 90 (372)
T 3slg_A 24 AKKVLILGVNGFIGHHLSKRILETTD-------WEVFGMDMQTDRLGDLVK------HERMHFFEGDITINKEWVEYHVK 90 (372)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHSS-------CEEEEEESCCTTTGGGGG------STTEEEEECCTTTCHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCC-------CEEEEEeCChhhhhhhcc------CCCeEEEeCccCCCHHHHHHHhc
Confidence 468999999999999999999998 6 899999999877654432 257899999999 9999999999
Q ss_pred CccEEeecCCCCC
Q 012947 88 QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ~~dvVIn~aGp~~ 100 (452)
++|+||||||...
T Consensus 91 ~~d~Vih~A~~~~ 103 (372)
T 3slg_A 91 KCDVILPLVAIAT 103 (372)
T ss_dssp HCSEEEECBCCCC
T ss_pred cCCEEEEcCcccc
Confidence 9999999998643
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.16 E-value=1.9e-10 Score=112.94 Aligned_cols=82 Identities=11% Similarity=0.033 Sum_probs=69.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC------------hhHHHHHHHHhCCCCCCCccEEEEeCC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN------------PTRVKQALQWASPSHSLSIPILTADTT 77 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~------------~~kl~~l~~~l~~~~~~~v~~v~~Dl~ 77 (452)
...++||||+++||+.+++.|+++| ++|++++|+ .++++++.+++.. ...++.++.+|++
T Consensus 28 gk~~lVTGas~GIG~aia~~la~~G-------~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~ 99 (299)
T 3t7c_A 28 GKVAFITGAARGQGRSHAITLAREG-------ADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEA-LGRRIIASQVDVR 99 (299)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHH-TTCCEEEEECCTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEecccccccccccccCHHHHHHHHHHHHh-cCCceEEEECCCC
Confidence 4579999999999999999999998 899999987 6777776665532 2357889999999
Q ss_pred CHHHHHHHHc-------CccEEeecCCCC
Q 012947 78 DPPSLHRLCS-------QTKLLLNCVGPY 99 (452)
Q Consensus 78 d~~sl~~~~~-------~~dvVIn~aGp~ 99 (452)
|+++++++++ +.|+||||||..
T Consensus 100 ~~~~v~~~~~~~~~~~g~iD~lv~nAg~~ 128 (299)
T 3t7c_A 100 DFDAMQAAVDDGVTQLGRLDIVLANAALA 128 (299)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence 9999998886 689999999964
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.15 E-value=1.7e-11 Score=117.06 Aligned_cols=86 Identities=15% Similarity=0.062 Sum_probs=68.3
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEe-cChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 012947 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAG-RNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 7 ~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iag-R~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
..+...++||||+|+||++++++|+++| ++|++.+ |+.++.++..+++.. ...++.++.+|++|.++++++
T Consensus 10 ~~~~k~vlITGas~giG~~ia~~l~~~G-------~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~ 81 (256)
T 3ezl_A 10 VMSQRIAYVTGGMGGIGTSICQRLHKDG-------FRVVAGCGPNSPRRVKWLEDQKA-LGFDFYASEGNVGDWDSTKQA 81 (256)
T ss_dssp ---CEEEEETTTTSHHHHHHHHHHHHTT-------EEEEEEECTTCSSHHHHHHHHHH-TTCCCEEEECCTTCHHHHHHH
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCCHHHHHHHHHHHHh-cCCeeEEEecCCCCHHHHHHH
Confidence 4456789999999999999999999998 8998887 676666665555421 235788999999999999988
Q ss_pred Hc-------CccEEeecCCCCC
Q 012947 86 CS-------QTKLLLNCVGPYR 100 (452)
Q Consensus 86 ~~-------~~dvVIn~aGp~~ 100 (452)
++ +.|+||||||...
T Consensus 82 ~~~~~~~~g~id~lv~~Ag~~~ 103 (256)
T 3ezl_A 82 FDKVKAEVGEIDVLVNNAGITR 103 (256)
T ss_dssp HHHHHHHTCCEEEEEECCCCCC
T ss_pred HHHHHHhcCCCCEEEECCCCCC
Confidence 87 6799999999653
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.15 E-value=1.8e-11 Score=117.09 Aligned_cols=79 Identities=15% Similarity=0.063 Sum_probs=69.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~- 88 (452)
...++||||+|+||+++++.|+++| ++|++.+|+.++++++.++++ .++.++.+|++|++++++++++
T Consensus 6 ~k~vlVTGas~giG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~ 74 (253)
T 1hxh_A 6 GKVALVTGGASGVGLEVVKLLLGEG-------AKVAFSDINEAAGQQLAAELG----ERSMFVRHDVSSEADWTLVMAAV 74 (253)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTT-------CEEEEECSCHHHHHHHHHHHC----TTEEEECCCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHcC----CceEEEEccCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 899999999999988887773 4678889999999999888764
Q ss_pred ------ccEEeecCCCC
Q 012947 89 ------TKLLLNCVGPY 99 (452)
Q Consensus 89 ------~dvVIn~aGp~ 99 (452)
.|+||||||..
T Consensus 75 ~~~~g~id~lv~~Ag~~ 91 (253)
T 1hxh_A 75 QRRLGTLNVLVNNAGIL 91 (253)
T ss_dssp HHHHCSCCEEEECCCCC
T ss_pred HHHcCCCCEEEECCCCC
Confidence 69999999964
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.15 E-value=3e-11 Score=114.89 Aligned_cols=78 Identities=13% Similarity=0.080 Sum_probs=66.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||++++++|+++| ++|++.+|+.++++++. ++ .++.++.+|++|+++++++++
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~-~~-----~~~~~~~~D~~~~~~~~~~~~~~ 72 (246)
T 2ag5_A 6 GKVIILTAAAQGIGQAAALAFAREG-------AKVIATDINESKLQELE-KY-----PGIQTRVLDVTKKKQIDQFANEV 72 (246)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHGGGG-GS-----TTEEEEECCTTCHHHHHHHHHHC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHH-hc-----cCceEEEeeCCCHHHHHHHHHHh
Confidence 3579999999999999999999998 89999999998886654 33 267889999999999987754
Q ss_pred -CccEEeecCCCCC
Q 012947 88 -QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -~~dvVIn~aGp~~ 100 (452)
+.|+||||||...
T Consensus 73 ~~id~lv~~Ag~~~ 86 (246)
T 2ag5_A 73 ERLDVLFNVAGFVH 86 (246)
T ss_dssp SCCSEEEECCCCCC
T ss_pred CCCCEEEECCccCC
Confidence 6899999999643
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=1.1e-10 Score=115.86 Aligned_cols=75 Identities=12% Similarity=0.051 Sum_probs=63.6
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 012947 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 7 ~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
..+.++|+|||||||+|++++++|+++| ++|++++|+.++ .++.++.+|++|++++.+++
T Consensus 16 ~~~~~~vlVtGatG~iG~~l~~~L~~~G-------~~V~~~~r~~~~-------------~~~~~~~~Dl~d~~~~~~~~ 75 (347)
T 4id9_A 16 PRGSHMILVTGSAGRVGRAVVAALRTQG-------RTVRGFDLRPSG-------------TGGEEVVGSLEDGQALSDAI 75 (347)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHTT-------CCEEEEESSCCS-------------SCCSEEESCTTCHHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCC-------CEEEEEeCCCCC-------------CCccEEecCcCCHHHHHHHH
Confidence 3356789999999999999999999998 799999998754 25789999999999999999
Q ss_pred cCccEEeecCCCCCC
Q 012947 87 SQTKLLLNCVGPYRL 101 (452)
Q Consensus 87 ~~~dvVIn~aGp~~~ 101 (452)
+++|+|||+|++...
T Consensus 76 ~~~d~vih~A~~~~~ 90 (347)
T 4id9_A 76 MGVSAVLHLGAFMSW 90 (347)
T ss_dssp TTCSEEEECCCCCCS
T ss_pred hCCCEEEECCcccCc
Confidence 999999999997543
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=2.8e-10 Score=107.22 Aligned_cols=77 Identities=19% Similarity=0.144 Sum_probs=66.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
.++|+|+||||++|++++++|+++++ .++|++.+|+.++++++ ..++.++.+|++|++++.++++++
T Consensus 4 ~~~ilVtGasG~iG~~l~~~l~~~~~-----g~~V~~~~r~~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~~~ 70 (253)
T 1xq6_A 4 LPTVLVTGASGRTGQIVYKKLKEGSD-----KFVAKGLVRSAQGKEKI--------GGEADVFIGDITDADSINPAFQGI 70 (253)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTT-----TCEEEEEESCHHHHHHT--------TCCTTEEECCTTSHHHHHHHHTTC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhcCC-----CcEEEEEEcCCCchhhc--------CCCeeEEEecCCCHHHHHHHHcCC
Confidence 36899999999999999999999831 17999999998876543 246789999999999999999999
Q ss_pred cEEeecCCCC
Q 012947 90 KLLLNCVGPY 99 (452)
Q Consensus 90 dvVIn~aGp~ 99 (452)
|+||||+|..
T Consensus 71 d~vi~~a~~~ 80 (253)
T 1xq6_A 71 DALVILTSAV 80 (253)
T ss_dssp SEEEECCCCC
T ss_pred CEEEEecccc
Confidence 9999999864
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.15 E-value=4.4e-11 Score=118.50 Aligned_cols=84 Identities=13% Similarity=0.160 Sum_probs=68.1
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
..++|+|||||||||++++++|+++| ++|++++|+.++.++..+++......++.++.+|++|+++++++++
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 76 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHG-------YDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA 76 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCC-------CcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc
Confidence 45689999999999999999999998 8999999986654443333210012467899999999999999998
Q ss_pred -CccEEeecCCCC
Q 012947 88 -QTKLLLNCVGPY 99 (452)
Q Consensus 88 -~~dvVIn~aGp~ 99 (452)
++|+||||||..
T Consensus 77 ~~~d~vih~A~~~ 89 (341)
T 3enk_A 77 HPITAAIHFAALK 89 (341)
T ss_dssp SCCCEEEECCCCC
T ss_pred cCCcEEEECcccc
Confidence 899999999864
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.15 E-value=1.7e-10 Score=112.56 Aligned_cols=97 Identities=20% Similarity=0.297 Sum_probs=78.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh-------hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-------TRVKQALQWASPSHSLSIPILTADTTDPPSLH 83 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~-------~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~ 83 (452)
++|+|+||||++|++++++|+++| ++|.+++|+. ++++.+ +++. ..++.++.+|++|++++.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g-------~~V~~~~R~~~~~~~~~~~~~~~-~~l~---~~~v~~v~~D~~d~~~l~ 71 (307)
T 2gas_A 3 NKILILGPTGAIGRHIVWASIKAG-------NPTYALVRKTITAANPETKEELI-DNYQ---SLGVILLEGDINDHETLV 71 (307)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHHT-------CCEEEEECCSCCSSCHHHHHHHH-HHHH---HTTCEEEECCTTCHHHHH
T ss_pred cEEEEECCCchHHHHHHHHHHhCC-------CcEEEEECCCcccCChHHHHHHH-HHHH---hCCCEEEEeCCCCHHHHH
Confidence 469999999999999999999998 7899999987 665543 2221 236789999999999999
Q ss_pred HHHcCccEEeecCCCCCC-CCHHHHHHHHHhC-Cc-EE
Q 012947 84 RLCSQTKLLLNCVGPYRL-HGDPVAAACVHSG-CD-YL 118 (452)
Q Consensus 84 ~~~~~~dvVIn~aGp~~~-~~~~vv~ac~~~g-~~-yv 118 (452)
++++++|+||||+|+... ...+++++|.+.| +. +|
T Consensus 72 ~~~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v 109 (307)
T 2gas_A 72 KAIKQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFF 109 (307)
T ss_dssp HHHTTCSEEEECSSSSCGGGHHHHHHHHHHHCCCSEEE
T ss_pred HHHhCCCEEEECCcccccccHHHHHHHHHhcCCceEEe
Confidence 999999999999987532 2367889999888 64 44
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.15 E-value=5.8e-11 Score=113.67 Aligned_cols=80 Identities=19% Similarity=0.133 Sum_probs=62.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||++++++|+++| ++|++.+|+.++++++.++++ .++.++.+|++|+++++++++
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~ 75 (257)
T 3tpc_A 7 SRVFIVTGASSGLGAAVTRMLAQEG-------ATVLGLDLKPPAGEEPAAELG----AAVRFRNADVTNEADATAALAFA 75 (257)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEESSCC----------------CEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEeCChHHHHHHHHHhC----CceEEEEccCCCHHHHHHHHHHH
Confidence 4579999999999999999999998 899999999999888777663 468899999999999998887
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
++|+||||||...
T Consensus 76 ~~~~g~id~lv~nAg~~~ 93 (257)
T 3tpc_A 76 KQEFGHVHGLVNCAGTAP 93 (257)
T ss_dssp HHHHSCCCEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 7899999999753
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.15 E-value=5e-11 Score=112.15 Aligned_cols=77 Identities=21% Similarity=0.135 Sum_probs=68.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..++|+||+|++|++++++|+++| ++|++.+|+.++++++.+++. ++.++.+|++|+++++++++
T Consensus 6 k~vlVtGasggiG~~~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~ 73 (234)
T 2ehd_A 6 GAVLITGASRGIGEATARLLHAKG-------YRVGLMARDEKRLQALAAELE-----GALPLPGDVREEGDWARAVAAME 73 (234)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHST-----TCEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHhh-----hceEEEecCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 899999999999988877652 67889999999999988876
Q ss_pred ----CccEEeecCCCC
Q 012947 88 ----QTKLLLNCVGPY 99 (452)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (452)
+.|+||||||..
T Consensus 74 ~~~~~id~li~~Ag~~ 89 (234)
T 2ehd_A 74 EAFGELSALVNNAGVG 89 (234)
T ss_dssp HHHSCCCEEEECCCCC
T ss_pred HHcCCCCEEEECCCcC
Confidence 679999999964
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=3.8e-10 Score=109.68 Aligned_cols=79 Identities=13% Similarity=0.086 Sum_probs=70.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||+++++.|+++| ++|++++|+.++++++.++++ .++.++.+|++|+++++++++
T Consensus 5 gk~~lVTGas~GIG~aia~~la~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~ 73 (281)
T 3zv4_A 5 GEVALITGGASGLGRALVDRFVAEG-------ARVAVLDKSAERLRELEVAHG----GNAVGVVGDVRSLQDQKRAAERC 73 (281)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHTB----TTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCc-------CEEEEEeCCHHHHHHHHHHcC----CcEEEEEcCCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 899999999999998887763 578899999999999988876
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
+.|+||||||..
T Consensus 74 ~~~~g~iD~lvnnAg~~ 90 (281)
T 3zv4_A 74 LAAFGKIDTLIPNAGIW 90 (281)
T ss_dssp HHHHSCCCEEECCCCCC
T ss_pred HHhcCCCCEEEECCCcC
Confidence 569999999964
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=3.5e-11 Score=114.99 Aligned_cols=83 Identities=16% Similarity=0.075 Sum_probs=69.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR-~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++||||+|+||++++++|+++| ++|++.+| +.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 7 ~k~vlITGasggiG~~~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~ 78 (261)
T 1gee_A 7 GKVVVITGSSTGLGKSMAIRFATEK-------AKVVVNYRSKEDEANSVLEEIKK-VGGEAIAVKGDVTVESDVINLVQS 78 (261)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTT-------CEEEEEESSCHHHHHHHHHHHHH-TTCEEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCC-------CEEEEEcCCChHHHHHHHHHHHh-cCCceEEEECCCCCHHHHHHHHHH
Confidence 3579999999999999999999998 89999999 88888777666521 12457788999999999998887
Q ss_pred ------CccEEeecCCCCC
Q 012947 88 ------QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (452)
+.|+||||||...
T Consensus 79 ~~~~~g~id~li~~Ag~~~ 97 (261)
T 1gee_A 79 AIKEFGKLDVMINNAGLEN 97 (261)
T ss_dssp HHHHHSCCCEEEECCCCCC
T ss_pred HHHHcCCCCEEEECCCCCC
Confidence 7899999999643
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=2.1e-11 Score=118.04 Aligned_cols=83 Identities=16% Similarity=0.109 Sum_probs=69.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR-~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++||||+|+||+++++.|+++| ++|++.+| +.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 28 ~k~vlVTGas~gIG~aia~~la~~G-------~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~v~~~~~~ 99 (269)
T 4dmm_A 28 DRIALVTGASRGIGRAIALELAAAG-------AKVAVNYASSAGAADEVVAAIAA-AGGEAFAVKADVSQESEVEALFAA 99 (269)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTT-------CEEEEEESSCHHHHHHHHHHHHH-TTCCEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEeCCChHHHHHHHHHHHh-cCCcEEEEECCCCCHHHHHHHHHH
Confidence 4579999999999999999999998 89999888 67777776665532 23467889999999999998887
Q ss_pred ------CccEEeecCCCCC
Q 012947 88 ------QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (452)
+.|+||||||...
T Consensus 100 ~~~~~g~id~lv~nAg~~~ 118 (269)
T 4dmm_A 100 VIERWGRLDVLVNNAGITR 118 (269)
T ss_dssp HHHHHSCCCEEEECCCCCC
T ss_pred HHHHcCCCCEEEECCCCCC
Confidence 6899999999654
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.15 E-value=4.2e-11 Score=113.08 Aligned_cols=75 Identities=17% Similarity=0.286 Sum_probs=65.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
++|+|+||||++|++++++|+++|. ++|++++|+.++++++ ...++.++.+|++|+++++++++++|
T Consensus 24 k~vlVtGatG~iG~~l~~~L~~~G~------~~V~~~~R~~~~~~~~-------~~~~~~~~~~Dl~d~~~~~~~~~~~D 90 (236)
T 3qvo_A 24 KNVLILGAGGQIARHVINQLADKQT------IKQTLFARQPAKIHKP-------YPTNSQIIMGDVLNHAALKQAMQGQD 90 (236)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCTT------EEEEEEESSGGGSCSS-------CCTTEEEEECCTTCHHHHHHHHTTCS
T ss_pred cEEEEEeCCcHHHHHHHHHHHhCCC------ceEEEEEcChhhhccc-------ccCCcEEEEecCCCHHHHHHHhcCCC
Confidence 5799999999999999999999873 7999999998876432 13468899999999999999999999
Q ss_pred EEeecCCC
Q 012947 91 LLLNCVGP 98 (452)
Q Consensus 91 vVIn~aGp 98 (452)
+||||+|+
T Consensus 91 ~vv~~a~~ 98 (236)
T 3qvo_A 91 IVYANLTG 98 (236)
T ss_dssp EEEEECCS
T ss_pred EEEEcCCC
Confidence 99999985
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.15 E-value=1.7e-10 Score=112.60 Aligned_cols=95 Identities=18% Similarity=0.280 Sum_probs=76.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh------hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP------TRVKQALQWASPSHSLSIPILTADTTDPPSLHR 84 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~------~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~ 84 (452)
++|+|+||||++|++++++|+++| ++|.++.|+. ++.+.+ +.+. ..++.++.+|++|++++.+
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g-------~~V~~l~R~~~~~~~~~~~~~~-~~l~---~~~v~~v~~D~~d~~~l~~ 73 (308)
T 1qyc_A 5 SRILLIGATGYIGRHVAKASLDLG-------HPTFLLVRESTASSNSEKAQLL-ESFK---ASGANIVHGSIDDHASLVE 73 (308)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTT-------CCEEEECCCCCTTTTHHHHHHH-HHHH---TTTCEEECCCTTCHHHHHH
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCC-------CCEEEEECCcccccCHHHHHHH-HHHH---hCCCEEEEeccCCHHHHHH
Confidence 579999999999999999999998 7899999973 343322 2231 2468899999999999999
Q ss_pred HHcCccEEeecCCCCC-CCCHHHHHHHHHhC-Cc
Q 012947 85 LCSQTKLLLNCVGPYR-LHGDPVAAACVHSG-CD 116 (452)
Q Consensus 85 ~~~~~dvVIn~aGp~~-~~~~~vv~ac~~~g-~~ 116 (452)
+++++|+|||++|+.. ....+++++|.+.+ +.
T Consensus 74 ~~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~ 107 (308)
T 1qyc_A 74 AVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVK 107 (308)
T ss_dssp HHHTCSEEEECCCGGGSGGGHHHHHHHHHHCCCS
T ss_pred HHcCCCEEEECCcchhhhhHHHHHHHHHhcCCCc
Confidence 9999999999998653 22368889999888 64
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.14 E-value=3e-10 Score=109.80 Aligned_cols=79 Identities=15% Similarity=0.133 Sum_probs=69.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||+++++.|+++| ++|++.+|+.++++++.+++. ++.++.+|++|+++++++++
T Consensus 9 ~k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~Dv~d~~~v~~~~~~~ 76 (270)
T 1yde_A 9 GKVVVVTGGGRGIGAGIVRAFVNSG-------ARVVICDKDESGGRALEQELP-----GAVFILCDVTQEDDVKTLVSET 76 (270)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHCT-----TEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhc-----CCeEEEcCCCCHHHHHHHHHHH
Confidence 4579999999999999999999998 899999999999988877652 47889999999999998887
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
+.|+||||||...
T Consensus 77 ~~~~g~iD~lv~nAg~~~ 94 (270)
T 1yde_A 77 IRRFGRLDCVVNNAGHHP 94 (270)
T ss_dssp HHHHSCCCEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 6899999999643
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.14 E-value=2.2e-11 Score=117.70 Aligned_cols=84 Identities=15% Similarity=0.117 Sum_probs=68.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR-~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
....++||||+|+||++++++|+++| ++|++.+| +.+.++.+.+.+.. ...++.++.+|++|+++++++++
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~ 99 (271)
T 4iin_A 28 TGKNVLITGASKGIGAEIAKTLASMG-------LKVWINYRSNAEVADALKNELEE-KGYKAAVIKFDAASESDFIEAIQ 99 (271)
T ss_dssp SCCEEEETTCSSHHHHHHHHHHHHTT-------CEEEEEESSCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCCHHHHHHHHHHHHh-cCCceEEEECCCCCHHHHHHHHH
Confidence 34579999999999999999999998 89999999 55555555554421 23578899999999999998886
Q ss_pred -------CccEEeecCCCCC
Q 012947 88 -------QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -------~~dvVIn~aGp~~ 100 (452)
+.|+||||||...
T Consensus 100 ~~~~~~g~id~li~nAg~~~ 119 (271)
T 4iin_A 100 TIVQSDGGLSYLVNNAGVVR 119 (271)
T ss_dssp HHHHHHSSCCEEEECCCCCC
T ss_pred HHHHhcCCCCEEEECCCcCC
Confidence 7899999999654
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=7.2e-11 Score=117.50 Aligned_cols=83 Identities=16% Similarity=0.155 Sum_probs=65.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhH----HHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR----VKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~k----l~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
.++|+|+|||||+|++++++|+++| ++|++++|+..+ ++.+..........++.++.+|++|++++.++
T Consensus 25 ~~~vlVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 97 (351)
T 3ruf_A 25 PKTWLITGVAGFIGSNLLEKLLKLN-------QVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQV 97 (351)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHH
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHH
Confidence 4689999999999999999999998 899999996543 33322211000004789999999999999999
Q ss_pred HcCccEEeecCCCC
Q 012947 86 CSQTKLLLNCVGPY 99 (452)
Q Consensus 86 ~~~~dvVIn~aGp~ 99 (452)
++++|+||||||..
T Consensus 98 ~~~~d~Vih~A~~~ 111 (351)
T 3ruf_A 98 MKGVDHVLHQAALG 111 (351)
T ss_dssp TTTCSEEEECCCCC
T ss_pred hcCCCEEEECCccC
Confidence 99999999999863
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.14 E-value=3.6e-11 Score=119.13 Aligned_cols=83 Identities=18% Similarity=0.149 Sum_probs=69.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC------------hhHHHHHHHHhCCCCCCCccEEEEeCC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN------------PTRVKQALQWASPSHSLSIPILTADTT 77 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~------------~~kl~~l~~~l~~~~~~~v~~v~~Dl~ 77 (452)
...++||||+|+||+.+++.|+++| ++|++++|+ .++++++.+++.. ...++.++.+|++
T Consensus 46 gk~~lVTGas~GIG~aia~~la~~G-------~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~ 117 (317)
T 3oec_A 46 GKVAFITGAARGQGRTHAVRLAQDG-------ADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEE-QGRRIIARQADVR 117 (317)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTT-------CEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHH-TTCCEEEEECCTT
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC-------CeEEEEecccccccccccccCHHHHHHHHHHHHh-cCCeEEEEECCCC
Confidence 4579999999999999999999998 899999886 6677666655431 2357888999999
Q ss_pred CHHHHHHHHc-------CccEEeecCCCCC
Q 012947 78 DPPSLHRLCS-------QTKLLLNCVGPYR 100 (452)
Q Consensus 78 d~~sl~~~~~-------~~dvVIn~aGp~~ 100 (452)
|+++++++++ +.|+||||||...
T Consensus 118 d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~ 147 (317)
T 3oec_A 118 DLASLQAVVDEALAEFGHIDILVSNVGISN 147 (317)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 9999998887 6899999999653
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=1.3e-10 Score=110.34 Aligned_cols=81 Identities=20% Similarity=0.245 Sum_probs=69.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC-hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~-~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++||||+|+||++++++|+++| ++|++.+|+ .++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 7 ~k~vlVTGasggiG~~~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~ 78 (258)
T 3afn_B 7 GKRVLITGSSQGIGLATARLFARAG-------AKVGLHGRKAPANIDETIASMRA-DGGDAAFFAADLATSEACQQLVDE 78 (258)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTT-------CEEEEEESSCCTTHHHHHHHHHH-TTCEEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCC-------CEEEEECCCchhhHHHHHHHHHh-cCCceEEEECCCCCHHHHHHHHHH
Confidence 3579999999999999999999998 899999999 8888777665531 12467889999999999999887
Q ss_pred ------CccEEeecCCC
Q 012947 88 ------QTKLLLNCVGP 98 (452)
Q Consensus 88 ------~~dvVIn~aGp 98 (452)
++|+||||||.
T Consensus 79 ~~~~~g~id~vi~~Ag~ 95 (258)
T 3afn_B 79 FVAKFGGIDVLINNAGG 95 (258)
T ss_dssp HHHHHSSCSEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 79999999996
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.14 E-value=2.6e-11 Score=116.78 Aligned_cols=78 Identities=14% Similarity=0.103 Sum_probs=67.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||+++++.|+++| ++|++++|+.+++.+..++. ++.++.+|++|+++++++++
T Consensus 27 ~k~vlVTGas~gIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~------~~~~~~~Dv~~~~~v~~~~~~~ 93 (260)
T 3gem_A 27 SAPILITGASQRVGLHCALRLLEHG-------HRVIISYRTEHASVTELRQA------GAVALYGDFSCETGIMAFIDLL 93 (260)
T ss_dssp CCCEEESSTTSHHHHHHHHHHHHTT-------CCEEEEESSCCHHHHHHHHH------TCEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEeCChHHHHHHHHhc------CCeEEECCCCCHHHHHHHHHHH
Confidence 3569999999999999999999998 89999999998876655544 36889999999999998886
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
+.|+||||||...
T Consensus 94 ~~~~g~iD~lv~nAg~~~ 111 (260)
T 3gem_A 94 KTQTSSLRAVVHNASEWL 111 (260)
T ss_dssp HHHCSCCSEEEECCCCCC
T ss_pred HHhcCCCCEEEECCCccC
Confidence 6899999999654
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.13 E-value=7e-11 Score=114.59 Aligned_cols=82 Identities=17% Similarity=0.138 Sum_probs=66.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||+.+++.|+++| ++|++++|+. +++++.+++.. ...++.++.+|++|+++++++.+
T Consensus 31 gk~~lVTGas~GIG~aia~~la~~G-------~~V~~~~r~~-~~~~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~ 101 (273)
T 3uf0_A 31 GRTAVVTGAGSGIGRAIAHGYARAG-------AHVLAWGRTD-GVKEVADEIAD-GGGSAEAVVADLADLEGAANVAEEL 101 (273)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESST-HHHHHHHHHHT-TTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEcCHH-HHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHH
Confidence 4579999999999999999999998 8999999764 44555555532 23567889999999999888765
Q ss_pred ----CccEEeecCCCCC
Q 012947 88 ----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (452)
+.|+||||||...
T Consensus 102 ~~~g~iD~lv~nAg~~~ 118 (273)
T 3uf0_A 102 AATRRVDVLVNNAGIIA 118 (273)
T ss_dssp HHHSCCCEEEECCCCCC
T ss_pred HhcCCCcEEEECCCCCC
Confidence 7899999999654
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.13 E-value=7.1e-11 Score=114.38 Aligned_cols=83 Identities=14% Similarity=0.106 Sum_probs=69.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~-~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++|+||+|+||+.++++|+++| ++|++++|+.++++++.+++... ....+.++.+|++|+++++++++
T Consensus 32 ~k~vlVTGasggIG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~ 104 (279)
T 1xg5_A 32 DRLALVTGASGGIGAAVARALVQQG-------LKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSA 104 (279)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHH
Confidence 4579999999999999999999998 89999999999888777665310 11346788999999999988876
Q ss_pred ------CccEEeecCCCC
Q 012947 88 ------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (452)
++|+||||||..
T Consensus 105 ~~~~~g~iD~vi~~Ag~~ 122 (279)
T 1xg5_A 105 IRSQHSGVDICINNAGLA 122 (279)
T ss_dssp HHHHHCCCSEEEECCCCC
T ss_pred HHHhCCCCCEEEECCCCC
Confidence 789999999954
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=4.8e-11 Score=116.63 Aligned_cols=83 Identities=17% Similarity=0.137 Sum_probs=69.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~- 88 (452)
...++||||+|++|++++++|+++| ++|++++|+.++++++.+++......++.++.+|++|++++++++++
T Consensus 26 ~k~vlITGasggiG~~la~~L~~~G-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 98 (302)
T 1w6u_A 26 GKVAFITGGGTGLGKGMTTLLSSLG-------AQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSEL 98 (302)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHH
Confidence 4679999999999999999999998 89999999999888777665210024678899999999999988875
Q ss_pred ------ccEEeecCCCC
Q 012947 89 ------TKLLLNCVGPY 99 (452)
Q Consensus 89 ------~dvVIn~aGp~ 99 (452)
.|+||||||..
T Consensus 99 ~~~~g~id~li~~Ag~~ 115 (302)
T 1w6u_A 99 IKVAGHPNIVINNAAGN 115 (302)
T ss_dssp HHHTCSCSEEEECCCCC
T ss_pred HHHcCCCCEEEECCCCC
Confidence 49999999954
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.12 E-value=4.9e-11 Score=114.03 Aligned_cols=84 Identities=13% Similarity=0.142 Sum_probs=69.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCC------CCCccEEEEeCCCHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSH------SLSIPILTADTTDPPSLH 83 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~------~~~v~~v~~Dl~d~~sl~ 83 (452)
...++||||+|+||++++++|+++| ++|++.+|+.++++++.+++.... ..++.++.+|++|+++++
T Consensus 7 ~k~vlITGasggiG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 79 (264)
T 2pd6_A 7 SALALVTGAGSGIGRAVSVRLAGEG-------ATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAAR 79 (264)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHH
Confidence 3579999999999999999999998 899999999999888777653200 146788999999999999
Q ss_pred HHHcCc--------cEEeecCCCCC
Q 012947 84 RLCSQT--------KLLLNCVGPYR 100 (452)
Q Consensus 84 ~~~~~~--------dvVIn~aGp~~ 100 (452)
++++++ |+||||||...
T Consensus 80 ~~~~~~~~~~g~i~d~vi~~Ag~~~ 104 (264)
T 2pd6_A 80 CLLEQVQACFSRPPSVVVSCAGITQ 104 (264)
T ss_dssp HHHHHHHHHHSSCCSEEEECCCCCC
T ss_pred HHHHHHHHHhCCCCeEEEECCCcCC
Confidence 888753 99999999653
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.12 E-value=4e-10 Score=107.76 Aligned_cols=110 Identities=13% Similarity=0.053 Sum_probs=82.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..++||||+|+||++++++|+++|. ..+|++.+|+.++++++.++++ .++.++.+|++|+++++++++
T Consensus 3 k~~lVTGas~GIG~aia~~l~~~g~-----~~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~ 73 (254)
T 3kzv_A 3 KVILVTGVSRGIGKSIVDVLFSLDK-----DTVVYGVARSEAPLKKLKEKYG----DRFFYVVGDITEDSVLKQLVNAAV 73 (254)
T ss_dssp CEEEECSTTSHHHHHHHHHHHHHCS-----SCEEEEEESCHHHHHHHHHHHG----GGEEEEESCTTSHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHhcCC-----CeEEEEecCCHHHHHHHHHHhC----CceEEEECCCCCHHHHHHHHHHHH
Confidence 3799999999999999999999862 1689999999999998888763 467889999999999998887
Q ss_pred ----CccEEeecCCCCCCC------CHHHHHHHHHhCCcEEEecCcHHHHHHHHHHH
Q 012947 88 ----QTKLLLNCVGPYRLH------GDPVAAACVHSGCDYLDISGEPEFMERMEARY 134 (452)
Q Consensus 88 ----~~dvVIn~aGp~~~~------~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~ 134 (452)
+.|+||||||..... ...-.+...+ +++.|....++...+.+
T Consensus 74 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~-----~N~~g~~~~~~~~~~~m 125 (254)
T 3kzv_A 74 KGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYD-----INFFSIVSLVGIALPEL 125 (254)
T ss_dssp HHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHH-----HHTHHHHHHHHHHHHHH
T ss_pred HhcCCccEEEECCcccCCCCCcccCCHHHHHHHHH-----HhhHHHHHHHHHHHHHH
Confidence 689999999974321 2223333333 34445555555554443
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.12 E-value=2.1e-10 Score=112.84 Aligned_cols=97 Identities=18% Similarity=0.300 Sum_probs=78.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh------hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP------TRVKQALQWASPSHSLSIPILTADTTDPPSLHR 84 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~------~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~ 84 (452)
++|+|+||||++|++++++|++++ ++|.+++|+. ++.+.+ +.+. ..++.++.+|++|++++.+
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g-------~~V~~~~R~~~~~~~~~~~~~l-~~~~---~~~v~~v~~D~~d~~~l~~ 73 (321)
T 3c1o_A 5 EKIIIYGGTGYIGKFMVRASLSFS-------HPTFIYARPLTPDSTPSSVQLR-EEFR---SMGVTIIEGEMEEHEKMVS 73 (321)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTT-------CCEEEEECCCCTTCCHHHHHHH-HHHH---HTTCEEEECCTTCHHHHHH
T ss_pred cEEEEEcCCchhHHHHHHHHHhCC-------CcEEEEECCcccccChHHHHHH-HHhh---cCCcEEEEecCCCHHHHHH
Confidence 579999999999999999999988 7899999986 344332 2221 2468899999999999999
Q ss_pred HHcCccEEeecCCCCC-CCCHHHHHHHHHhC-C-cEE
Q 012947 85 LCSQTKLLLNCVGPYR-LHGDPVAAACVHSG-C-DYL 118 (452)
Q Consensus 85 ~~~~~dvVIn~aGp~~-~~~~~vv~ac~~~g-~-~yv 118 (452)
+++++|+||||+|+.. ....+++++|.+.| + ++|
T Consensus 74 a~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v 110 (321)
T 3c1o_A 74 VLKQVDIVISALPFPMISSQIHIINAIKAAGNIKRFL 110 (321)
T ss_dssp HHTTCSEEEECCCGGGSGGGHHHHHHHHHHCCCCEEE
T ss_pred HHcCCCEEEECCCccchhhHHHHHHHHHHhCCccEEe
Confidence 9999999999998753 33478999999988 6 454
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.12 E-value=2.6e-11 Score=116.36 Aligned_cols=80 Identities=20% Similarity=0.181 Sum_probs=71.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||+++++.|+++| ++|++.+|+.++++++.++++ .++.++.+|++|+++++++++
T Consensus 8 gk~~lVTGas~gIG~a~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~ 76 (255)
T 4eso_A 8 GKKAIVIGGTHGMGLATVRRLVEGG-------AEVLLTGRNESNIARIREEFG----PRVHALRSDIADLNEIAVLGAAA 76 (255)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHG----GGEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhC----CcceEEEccCCCHHHHHHHHHHH
Confidence 4679999999999999999999998 899999999999999888773 467899999999999988776
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
+.|+||||||...
T Consensus 77 ~~~~g~id~lv~nAg~~~ 94 (255)
T 4eso_A 77 GQTLGAIDLLHINAGVSE 94 (255)
T ss_dssp HHHHSSEEEEEECCCCCC
T ss_pred HHHhCCCCEEEECCCCCC
Confidence 6799999999653
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.12 E-value=2.2e-10 Score=109.88 Aligned_cols=82 Identities=17% Similarity=0.229 Sum_probs=69.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH---
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC--- 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~--- 86 (452)
...++|+||+|+||++++++|+++| ++|++.+|+.++++++.+++.. ...++.++.+|++|++++++++
T Consensus 14 ~k~vlITGasggiG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 85 (266)
T 1xq1_A 14 AKTVLVTGGTKGIGHAIVEEFAGFG-------AVIHTCARNEYELNECLSKWQK-KGFQVTGSVCDASLRPEREKLMQTV 85 (266)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCeeEEEECCCCCHHHHHHHHHHH
Confidence 4679999999999999999999998 8999999999988877766531 1246788999999999998887
Q ss_pred -----cCccEEeecCCCC
Q 012947 87 -----SQTKLLLNCVGPY 99 (452)
Q Consensus 87 -----~~~dvVIn~aGp~ 99 (452)
.++|+||||||..
T Consensus 86 ~~~~~~~id~li~~Ag~~ 103 (266)
T 1xq1_A 86 SSMFGGKLDILINNLGAI 103 (266)
T ss_dssp HHHHTTCCSEEEEECCC-
T ss_pred HHHhCCCCcEEEECCCCC
Confidence 4689999999964
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.12 E-value=1.3e-10 Score=111.92 Aligned_cols=97 Identities=23% Similarity=0.211 Sum_probs=75.5
Q ss_pred eEEEEcCCchHHHHHHHHHHHc--CCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 12 DVIILGASGFTGKYVVREALKL--FNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~--g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
+|+|+|||||+|++++++|+++ + ++|++.+|+.++.+.+.. .++.++.+|++|++++.++++++
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g-------~~V~~~~r~~~~~~~~~~-------~~~~~~~~D~~d~~~~~~~~~~~ 66 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPA-------SQIVAIVRNPAKAQALAA-------QGITVRQADYGDEAALTSALQGV 66 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCG-------GGEEEEESCTTTCHHHHH-------TTCEEEECCTTCHHHHHHHTTTC
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCC-------ceEEEEEcChHhhhhhhc-------CCCeEEEcCCCCHHHHHHHHhCC
Confidence 4899999999999999999987 6 799999999887665433 25788999999999999999999
Q ss_pred cEEeecCCCCC----CCCHHHHHHHHHhCC-cEEEecC
Q 012947 90 KLLLNCVGPYR----LHGDPVAAACVHSGC-DYLDISG 122 (452)
Q Consensus 90 dvVIn~aGp~~----~~~~~vv~ac~~~g~-~yvDlsg 122 (452)
|+|||++|+.. ....+++++|.+.++ ++|.++.
T Consensus 67 d~vi~~a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss 104 (286)
T 2zcu_A 67 EKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSL 104 (286)
T ss_dssp SEEEECC--------CHHHHHHHHHHHHTCCEEEEEEE
T ss_pred CEEEEeCCCCchHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 99999998531 112566777777665 4555543
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.12 E-value=2.9e-11 Score=117.41 Aligned_cols=112 Identities=11% Similarity=0.050 Sum_probs=83.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||+.+++.|+++| ++|++.+|+.++++++.+++.. ...++..+.+|++|+++++++++
T Consensus 33 gk~~lVTGas~GIG~aia~~la~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~~~~~~~~~ 104 (275)
T 4imr_A 33 GRTALVTGSSRGIGAAIAEGLAGAG-------AHVILHGVKPGSTAAVQQRIIA-SGGTAQELAGDLSEAGAGTDLIERA 104 (275)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTT-------CEEEEEESSTTTTHHHHHHHHH-TTCCEEEEECCTTSTTHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEcCCHHHHHHHHHHHHh-cCCeEEEEEecCCCHHHHHHHHHHH
Confidence 4579999999999999999999998 8999999999988887776632 23578899999999999988876
Q ss_pred ----CccEEeecCCCCCCC-----CHHHHHHHHHhCCcEEEecCcHHHHHHHHHHH
Q 012947 88 ----QTKLLLNCVGPYRLH-----GDPVAAACVHSGCDYLDISGEPEFMERMEARY 134 (452)
Q Consensus 88 ----~~dvVIn~aGp~~~~-----~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~ 134 (452)
+.|+||||||..... ...-.+...+ +++.|....++...+.+
T Consensus 105 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~-----vN~~g~~~l~~~~~~~m 155 (275)
T 4imr_A 105 EAIAPVDILVINASAQINATLSALTPNDLAFQLA-----VNLGSTVDMLQSALPKM 155 (275)
T ss_dssp HHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHH-----HHTHHHHHHHHHHHHHH
T ss_pred HHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHH-----HHhHHHHHHHHHHHHHH
Confidence 689999999964321 2222333332 34445555556654433
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.12 E-value=2.8e-11 Score=116.88 Aligned_cols=84 Identities=15% Similarity=0.113 Sum_probs=70.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEE-ecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~ia-gR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
+...++||||+|+||+.++++|+++| ++|++. .|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 25 ~~k~vlITGas~gIG~a~a~~l~~~G-------~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~ 96 (272)
T 4e3z_A 25 DTPVVLVTGGSRGIGAAVCRLAARQG-------WRVGVNYAANREAADAVVAAITE-SGGEAVAIPGDVGNAADIAAMFS 96 (272)
T ss_dssp CSCEEEETTTTSHHHHHHHHHHHHTT-------CEEEEEESSCHHHHHHHHHHHHH-TTCEEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEcCCChhHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHH
Confidence 34579999999999999999999998 788776 8888888877766532 23467899999999999998887
Q ss_pred -------CccEEeecCCCCC
Q 012947 88 -------QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -------~~dvVIn~aGp~~ 100 (452)
+.|+||||||...
T Consensus 97 ~~~~~~g~id~li~nAg~~~ 116 (272)
T 4e3z_A 97 AVDRQFGRLDGLVNNAGIVD 116 (272)
T ss_dssp HHHHHHSCCCEEEECCCCCC
T ss_pred HHHHhCCCCCEEEECCCCCC
Confidence 6799999999654
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.12 E-value=1.2e-10 Score=115.46 Aligned_cols=80 Identities=15% Similarity=0.271 Sum_probs=66.3
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
+.++|+|||||||+|++++++|+++| ++|++.+|+..+..++.++ ..++.++.+|++|++++.++++
T Consensus 19 ~~~~vlVTGasG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~-----l~~v~~~~~Dl~d~~~~~~~~~~ 86 (330)
T 2pzm_A 19 SHMRILITGGAGCLGSNLIEHWLPQG-------HEILVIDNFATGKREVLPP-----VAGLSVIEGSVTDAGLLERAFDS 86 (330)
T ss_dssp TCCEEEEETTTSHHHHHHHHHHGGGT-------CEEEEEECCSSSCGGGSCS-----CTTEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEECCCccchhhhhc-----cCCceEEEeeCCCHHHHHHHHhh
Confidence 45789999999999999999999998 8999999976543222121 1367889999999999999999
Q ss_pred -CccEEeecCCCCC
Q 012947 88 -QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -~~dvVIn~aGp~~ 100 (452)
++|+||||||...
T Consensus 87 ~~~D~vih~A~~~~ 100 (330)
T 2pzm_A 87 FKPTHVVHSAAAYK 100 (330)
T ss_dssp HCCSEEEECCCCCS
T ss_pred cCCCEEEECCccCC
Confidence 9999999999754
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.11 E-value=5.9e-11 Score=112.99 Aligned_cols=78 Identities=19% Similarity=0.149 Sum_probs=68.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||+.++++|+++| ++|++.+|+.++++++.+++ .+.++.+|++|+++++++++
T Consensus 5 ~k~vlVTGas~giG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~ 71 (245)
T 1uls_A 5 DKAVLITGAAHGIGRATLELFAKEG-------ARLVACDIEEGPLREAAEAV------GAHPVVMDVADPASVERGFAEA 71 (245)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHTT------TCEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHc------CCEEEEecCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 89999999999988877644 26788999999999988876
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
++|+||||||...
T Consensus 72 ~~~~g~id~lvn~Ag~~~ 89 (245)
T 1uls_A 72 LAHLGRLDGVVHYAGITR 89 (245)
T ss_dssp HHHHSSCCEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 4799999999643
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.11 E-value=3e-11 Score=116.59 Aligned_cols=85 Identities=16% Similarity=0.142 Sum_probs=69.1
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEe-cChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 012947 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAG-RNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 7 ~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iag-R~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
+.....++||||+|+||+.++++|+++| ++|++.+ |+.+++++..+++.. ...++.++.+|++|+++++++
T Consensus 22 ~~~~k~vlITGas~gIG~~~a~~l~~~G-------~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~ 93 (269)
T 3gk3_A 22 MQAKRVAFVTGGMGGLGAAISRRLHDAG-------MAVAVSHSERNDHVSTWLMHERD-AGRDFKAYAVDVADFESCERC 93 (269)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHTTT-------CEEEEEECSCHHHHHHHHHHHHT-TTCCCEEEECCTTCHHHHHHH
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEcCCchHHHHHHHHHHHh-cCCceEEEEecCCCHHHHHHH
Confidence 3345679999999999999999999998 7999988 666777666655532 235788999999999999988
Q ss_pred Hc-------CccEEeecCCCC
Q 012947 86 CS-------QTKLLLNCVGPY 99 (452)
Q Consensus 86 ~~-------~~dvVIn~aGp~ 99 (452)
++ +.|+||||||..
T Consensus 94 ~~~~~~~~g~id~li~nAg~~ 114 (269)
T 3gk3_A 94 AEKVLADFGKVDVLINNAGIT 114 (269)
T ss_dssp HHHHHHHHSCCSEEEECCCCC
T ss_pred HHHHHHHcCCCCEEEECCCcC
Confidence 87 789999999964
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.11 E-value=6.2e-11 Score=113.50 Aligned_cols=76 Identities=16% Similarity=0.168 Sum_probs=66.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||++++++|+++| ++|++.+|+.++ +++.+++. . .++.+|++|+++++++++
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~-~~~~~~~~-----~-~~~~~D~~~~~~~~~~~~~~ 71 (256)
T 2d1y_A 6 GKGVLVTGGARGIGRAIAQAFAREG-------ALVALCDLRPEG-KEVAEAIG-----G-AFFQVDLEDERERVRFVEEA 71 (256)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESSTTH-HHHHHHHT-----C-EEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEeCChhH-HHHHHHhh-----C-CEEEeeCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 899999999888 77776662 4 788999999999988876
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
+.|+||||||..
T Consensus 72 ~~~~g~iD~lv~~Ag~~ 88 (256)
T 2d1y_A 72 AYALGRVDVLVNNAAIA 88 (256)
T ss_dssp HHHHSCCCEEEECCCCC
T ss_pred HHHcCCCCEEEECCCCC
Confidence 679999999964
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.11 E-value=1.6e-10 Score=113.71 Aligned_cols=96 Identities=18% Similarity=0.291 Sum_probs=77.9
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh-HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~-kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
+|+|+||||++|++++++|+++| ++|.++.|+.+ +.+.+ +++. ..++.++.+|++|++++.++++++|
T Consensus 13 ~ilVtGatG~iG~~l~~~L~~~g-------~~V~~l~R~~~~~~~~~-~~l~---~~~v~~v~~Dl~d~~~l~~a~~~~d 81 (318)
T 2r6j_A 13 KILIFGGTGYIGNHMVKGSLKLG-------HPTYVFTRPNSSKTTLL-DEFQ---SLGAIIVKGELDEHEKLVELMKKVD 81 (318)
T ss_dssp CEEEETTTSTTHHHHHHHHHHTT-------CCEEEEECTTCSCHHHH-HHHH---HTTCEEEECCTTCHHHHHHHHTTCS
T ss_pred eEEEECCCchHHHHHHHHHHHCC-------CcEEEEECCCCchhhHH-HHhh---cCCCEEEEecCCCHHHHHHHHcCCC
Confidence 79999999999999999999998 78999999875 43322 2221 1367899999999999999999999
Q ss_pred EEeecCCCCCC-CCHHHHHHHHHhC-Cc-EE
Q 012947 91 LLLNCVGPYRL-HGDPVAAACVHSG-CD-YL 118 (452)
Q Consensus 91 vVIn~aGp~~~-~~~~vv~ac~~~g-~~-yv 118 (452)
+|||++|+... ...+++++|.+.+ +. +|
T Consensus 82 ~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v 112 (318)
T 2r6j_A 82 VVISALAFPQILDQFKILEAIKVAGNIKRFL 112 (318)
T ss_dssp EEEECCCGGGSTTHHHHHHHHHHHCCCCEEE
T ss_pred EEEECCchhhhHHHHHHHHHHHhcCCCCEEE
Confidence 99999986532 3378899999988 64 44
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.11 E-value=5.3e-11 Score=115.12 Aligned_cols=76 Identities=14% Similarity=0.058 Sum_probs=63.6
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 012947 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 7 ~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
..+..++|||||+|+||+++++.|+++| ++|++.+|+.+++. ..+..+.+|++|++++++++
T Consensus 11 ~~~~k~vlVTGas~GIG~aia~~l~~~G-------~~V~~~~r~~~~~~-----------~~~~~~~~Dv~~~~~v~~~~ 72 (269)
T 3vtz_A 11 EFTDKVAIVTGGSSGIGLAVVDALVRYG-------AKVVSVSLDEKSDV-----------NVSDHFKIDVTNEEEVKEAV 72 (269)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTT-------CEEEEEESCC--CT-----------TSSEEEECCTTCHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEeCCchhcc-----------CceeEEEecCCCHHHHHHHH
Confidence 3345789999999999999999999998 89999999876541 24678899999999999888
Q ss_pred c-------CccEEeecCCCCC
Q 012947 87 S-------QTKLLLNCVGPYR 100 (452)
Q Consensus 87 ~-------~~dvVIn~aGp~~ 100 (452)
+ +.|+||||||...
T Consensus 73 ~~~~~~~g~iD~lv~nAg~~~ 93 (269)
T 3vtz_A 73 EKTTKKYGRIDILVNNAGIEQ 93 (269)
T ss_dssp HHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHcCCCCEEEECCCcCC
Confidence 7 7899999999643
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.11 E-value=1.9e-10 Score=110.75 Aligned_cols=73 Identities=15% Similarity=0.192 Sum_probs=65.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
.+|+||||||+||++++++|+++| ++|++.+|+..+.+ ..++.++.+|++|++++.++++++|
T Consensus 4 k~vlVTGasg~IG~~la~~L~~~G-------~~V~~~~r~~~~~~----------~~~~~~~~~Dl~d~~~~~~~~~~~D 66 (267)
T 3rft_A 4 KRLLVTGAAGQLGRVMRERLAPMA-------EILRLADLSPLDPA----------GPNEECVQCDLADANAVNAMVAGCD 66 (267)
T ss_dssp EEEEEESTTSHHHHHHHHHTGGGE-------EEEEEEESSCCCCC----------CTTEEEEECCTTCHHHHHHHHTTCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcC-------CEEEEEecCCcccc----------CCCCEEEEcCCCCHHHHHHHHcCCC
Confidence 479999999999999999999998 89999999876542 2468899999999999999999999
Q ss_pred EEeecCCCCC
Q 012947 91 LLLNCVGPYR 100 (452)
Q Consensus 91 vVIn~aGp~~ 100 (452)
+||||||...
T Consensus 67 ~vi~~Ag~~~ 76 (267)
T 3rft_A 67 GIVHLGGISV 76 (267)
T ss_dssp EEEECCSCCS
T ss_pred EEEECCCCcC
Confidence 9999999743
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.10 E-value=6.6e-11 Score=115.29 Aligned_cols=83 Identities=14% Similarity=0.162 Sum_probs=69.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh-hHHHHHHHHhCCCCCCCccEEEEeCCC----HHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-TRVKQALQWASPSHSLSIPILTADTTD----PPSLHR 84 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~-~kl~~l~~~l~~~~~~~v~~v~~Dl~d----~~sl~~ 84 (452)
...++||||+|+||+++++.|+++| ++|++++|+. ++++++.+++......++.++.+|++| ++++++
T Consensus 23 ~k~~lVTGas~gIG~aia~~L~~~G-------~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~ 95 (288)
T 2x9g_A 23 APAAVVTGAAKRIGRAIAVKLHQTG-------YRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEE 95 (288)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHHT-------CEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC-------CeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHH
Confidence 3579999999999999999999998 8999999998 888777766520013467889999999 999888
Q ss_pred HHc-------CccEEeecCCCC
Q 012947 85 LCS-------QTKLLLNCVGPY 99 (452)
Q Consensus 85 ~~~-------~~dvVIn~aGp~ 99 (452)
+++ ++|+||||||..
T Consensus 96 ~~~~~~~~~g~iD~lvnnAG~~ 117 (288)
T 2x9g_A 96 IINSCFRAFGRCDVLVNNASAF 117 (288)
T ss_dssp HHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHhcCCCCEEEECCCCC
Confidence 876 689999999964
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.10 E-value=1.2e-10 Score=111.04 Aligned_cols=104 Identities=19% Similarity=0.154 Sum_probs=77.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
-..++||||+++||+.+++.|+++| ++|++.+|+.+++++. ...++..+.+|++|+++++++++
T Consensus 11 GK~alVTGas~GIG~aia~~la~~G-------a~Vv~~~~~~~~~~~~-------~~~~~~~~~~Dv~~~~~v~~~~~~~ 76 (242)
T 4b79_A 11 GQQVLVTGGSSGIGAAIAMQFAELG-------AEVVALGLDADGVHAP-------RHPRIRREELDITDSQRLQRLFEAL 76 (242)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESSTTSTTSC-------CCTTEEEEECCTTCHHHHHHHHHHC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHhhh-------hcCCeEEEEecCCCHHHHHHHHHhc
Confidence 4579999999999999999999999 8999999998876431 23577889999999999999887
Q ss_pred -CccEEeecCCCCCCC---CHHHHHHHHHhCCcEEEecCcHHHHHHHHH
Q 012947 88 -QTKLLLNCVGPYRLH---GDPVAAACVHSGCDYLDISGEPEFMERMEA 132 (452)
Q Consensus 88 -~~dvVIn~aGp~~~~---~~~vv~ac~~~g~~yvDlsge~~~~~~~~~ 132 (452)
+.|++|||||..... .....+... -+++.|....++...+
T Consensus 77 g~iDiLVNNAGi~~~~~~~~~~~w~~~~-----~vNl~g~~~~~~~~~p 120 (242)
T 4b79_A 77 PRLDVLVNNAGISRDREEYDLATFERVL-----RLNLSAAMLASQLARP 120 (242)
T ss_dssp SCCSEEEECCCCCCGGGGGSHHHHHHHH-----HHHTHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCcccCCHHHHHHHH-----HHhhHHHHHHHHHHHH
Confidence 689999999964321 122223222 2455565555555543
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.09 E-value=5.4e-11 Score=112.58 Aligned_cols=82 Identities=15% Similarity=0.210 Sum_probs=66.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEE-ecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~ia-gR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++|+||+|+||++++++|+++| ++|++. .|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 5 ~~~vlItGasggiG~~~a~~l~~~G-------~~V~~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~ 76 (247)
T 2hq1_A 5 GKTAIVTGSSRGLGKAIAWKLGNMG-------ANIVLNGSPASTSLDATAEEFKA-AGINVVVAKGDVKNPEDVENMVKT 76 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTT-------CEEEEEECTTCSHHHHHHHHHHH-TTCCEEEEESCTTSHHHHHHHHHH
T ss_pred CcEEEEECCCchHHHHHHHHHHHCC-------CEEEEEcCcCHHHHHHHHHHHHh-cCCcEEEEECCCCCHHHHHHHHHH
Confidence 3579999999999999999999998 789888 6787777766655521 13467889999999999998887
Q ss_pred ------CccEEeecCCCC
Q 012947 88 ------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (452)
+.|+||||||..
T Consensus 77 ~~~~~~~~d~vi~~Ag~~ 94 (247)
T 2hq1_A 77 AMDAFGRIDILVNNAGIT 94 (247)
T ss_dssp HHHHHSCCCEEEECC---
T ss_pred HHHhcCCCCEEEECCCCC
Confidence 789999999964
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.09 E-value=1.1e-10 Score=112.82 Aligned_cols=83 Identities=11% Similarity=0.075 Sum_probs=68.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR-~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++||||+|+||++++++|+++| ++|++.+| +.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 18 ~k~~lVTGas~gIG~aia~~l~~~G-------~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~ 89 (270)
T 3is3_A 18 GKVALVTGSGRGIGAAVAVHLGRLG-------AKVVVNYANSTKDAEKVVSEIKA-LGSDAIAIKADIRQVPEIVKLFDQ 89 (270)
T ss_dssp TCEEEESCTTSHHHHHHHHHHHHTT-------CEEEEEESSCHHHHHHHHHHHHH-TTCCEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEcCCCHHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHH
Confidence 4679999999999999999999998 79988765 56667666665532 23578899999999999998887
Q ss_pred ------CccEEeecCCCCC
Q 012947 88 ------QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (452)
+.|+||||||...
T Consensus 90 ~~~~~g~id~lvnnAg~~~ 108 (270)
T 3is3_A 90 AVAHFGHLDIAVSNSGVVS 108 (270)
T ss_dssp HHHHHSCCCEEECCCCCCC
T ss_pred HHHHcCCCCEEEECCCCCC
Confidence 6799999999753
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.09 E-value=2.2e-11 Score=115.24 Aligned_cols=84 Identities=12% Similarity=0.126 Sum_probs=70.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|++|++++++|+++| ++|++.+|+.++++++.+++......++.++.+|++|+++++++++
T Consensus 7 ~~~vlVtGasggiG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 79 (248)
T 2pnf_A 7 GKVSLVTGSTRGIGRAIAEKLASAG-------STVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEI 79 (248)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTT-------CEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 8999999999888777665421002467889999999999999887
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
++|+||||||...
T Consensus 80 ~~~~~~~d~vi~~Ag~~~ 97 (248)
T 2pnf_A 80 YNLVDGIDILVNNAGITR 97 (248)
T ss_dssp HHHSSCCSEEEECCCCCC
T ss_pred HHhcCCCCEEEECCCCCC
Confidence 7899999999653
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=99.09 E-value=3.5e-10 Score=109.27 Aligned_cols=132 Identities=12% Similarity=0.054 Sum_probs=89.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
+...++||||+++||+.+++.|+++| ++|++.+|+.++. ..+...+.+|++|+++++++++
T Consensus 10 ~GK~alVTGas~GIG~aia~~la~~G-------a~V~~~~r~~~~~-----------~~~~~~~~~Dv~~~~~v~~~~~~ 71 (261)
T 4h15_A 10 RGKRALITAGTKGAGAATVSLFLELG-------AQVLTTARARPEG-----------LPEELFVEADLTTKEGCAIVAEA 71 (261)
T ss_dssp TTCEEEESCCSSHHHHHHHHHHHHTT-------CEEEEEESSCCTT-----------SCTTTEEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEeccCcHHHHHHHHHHHHcC-------CEEEEEECCchhC-----------CCcEEEEEcCCCCHHHHHHHHHH
Confidence 45689999999999999999999999 8999999986431 1344678999999999988876
Q ss_pred ------CccEEeecCCCCCCC-------CHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEE--cCCCCC
Q 012947 88 ------QTKLLLNCVGPYRLH-------GDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLV--SACGFD 152 (452)
Q Consensus 88 ------~~dvVIn~aGp~~~~-------~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv--~~~G~~ 152 (452)
+.|++|||||..... .....+...+ +++.+....++..++.+. .++.|.+|. +..|..
T Consensus 72 ~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~-----vNl~g~~~~~~~~~p~m~--~~~~G~Iv~isS~~~~~ 144 (261)
T 4h15_A 72 TRQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELS-----LNLFAAVRLDRQLVPDMV--ARGSGVVVHVTSIQRVL 144 (261)
T ss_dssp HHHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHH-----HHTHHHHHHHHHHHHHHH--HHTCEEEEEECCGGGTS
T ss_pred HHHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHH-----HHhHHHHHHHHhhchhhh--hcCCceEEEEEehhhcc
Confidence 579999999954322 1223333332 345566666666655443 344554443 334555
Q ss_pred cchhhHHHHHHhh
Q 012947 153 SIPAELGVMFNSR 165 (452)
Q Consensus 153 s~P~dl~~~~~~~ 165 (452)
+.|.....|.++|
T Consensus 145 ~~~~~~~~Y~asK 157 (261)
T 4h15_A 145 PLPESTTAYAAAK 157 (261)
T ss_dssp CCTTTCHHHHHHH
T ss_pred CCCCccHHHHHHH
Confidence 5565555554443
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.09 E-value=4.9e-11 Score=114.09 Aligned_cols=79 Identities=18% Similarity=0.193 Sum_probs=65.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..++||||+|+||++++++|+++| ++|++.+|+.+ ++..+++.. ...++.++.+|++|+++++++++
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G-------~~V~~~~r~~~--~~~~~~l~~-~~~~~~~~~~D~~~~~~v~~~~~~~~ 74 (255)
T 2q2v_A 5 KTALVTGSTSGIGLGIAQVLARAG-------ANIVLNGFGDP--APALAEIAR-HGVKAVHHPADLSDVAQIEALFALAE 74 (255)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTT-------CEEEEECSSCC--HHHHHHHHT-TSCCEEEECCCTTSHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCch--HHHHHHHHh-cCCceEEEeCCCCCHHHHHHHHHHHH
Confidence 579999999999999999999998 89999999876 333444421 12457788899999999999887
Q ss_pred ----CccEEeecCCCC
Q 012947 88 ----QTKLLLNCVGPY 99 (452)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (452)
++|+||||||..
T Consensus 75 ~~~g~id~lv~~Ag~~ 90 (255)
T 2q2v_A 75 REFGGVDILVNNAGIQ 90 (255)
T ss_dssp HHHSSCSEEEECCCCC
T ss_pred HHcCCCCEEEECCCCC
Confidence 799999999964
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.09 E-value=3.4e-10 Score=109.29 Aligned_cols=83 Identities=11% Similarity=0.088 Sum_probs=69.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCH----HHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDP----PSLHR 84 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR-~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~----~sl~~ 84 (452)
...++||||+|+||++++++|+++| ++|++++| +.++++++.+++......++.++.+|++|+ +++++
T Consensus 11 ~k~~lVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 83 (276)
T 1mxh_A 11 CPAAVITGGARRIGHSIAVRLHQQG-------FRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCED 83 (276)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTT-------CEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHH
Confidence 3579999999999999999999998 89999999 998888877766210024678899999999 88888
Q ss_pred HHc-------CccEEeecCCCC
Q 012947 85 LCS-------QTKLLLNCVGPY 99 (452)
Q Consensus 85 ~~~-------~~dvVIn~aGp~ 99 (452)
+++ +.|+||||||..
T Consensus 84 ~~~~~~~~~g~id~lv~nAg~~ 105 (276)
T 1mxh_A 84 IIDCSFRAFGRCDVLVNNASAY 105 (276)
T ss_dssp HHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHhcCCCCEEEECCCCC
Confidence 876 689999999964
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.09 E-value=1.6e-10 Score=113.01 Aligned_cols=83 Identities=20% Similarity=0.254 Sum_probs=70.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC----CCCCCccEEEEeCCCHHHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP----SHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~----~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
...++||||+|+||++++++|+++| ++|++++|+.++++++.+++.. ....++.++.+|++|+++++++
T Consensus 18 ~k~vlVTGasggIG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~ 90 (303)
T 1yxm_A 18 GQVAIVTGGATGIGKAIVKELLELG-------SNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNL 90 (303)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHH
Confidence 3579999999999999999999998 8999999999988877766521 0134678899999999999988
Q ss_pred Hc-------CccEEeecCCCC
Q 012947 86 CS-------QTKLLLNCVGPY 99 (452)
Q Consensus 86 ~~-------~~dvVIn~aGp~ 99 (452)
++ ++|+||||||..
T Consensus 91 ~~~~~~~~g~id~li~~Ag~~ 111 (303)
T 1yxm_A 91 VKSTLDTFGKINFLVNNGGGQ 111 (303)
T ss_dssp HHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHcCCCCEEEECCCCC
Confidence 87 489999999954
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.08 E-value=6.1e-10 Score=107.06 Aligned_cols=84 Identities=17% Similarity=0.097 Sum_probs=70.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHcC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~-~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
...++||||+|+||+++++.|+++| ++|++++|+.++++++.+++... ...++.++.+|++|++++++++++
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 79 (267)
T 2gdz_A 7 GKVALVTGAAQGIGRAFAEALLLKG-------AKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRK 79 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHH
Confidence 4579999999999999999999998 89999999999888777766421 123567889999999999988764
Q ss_pred -------ccEEeecCCCCC
Q 012947 89 -------TKLLLNCVGPYR 100 (452)
Q Consensus 89 -------~dvVIn~aGp~~ 100 (452)
.|+||||||...
T Consensus 80 ~~~~~g~id~lv~~Ag~~~ 98 (267)
T 2gdz_A 80 VVDHFGRLDILVNNAGVNN 98 (267)
T ss_dssp HHHHHSCCCEEEECCCCCC
T ss_pred HHHHcCCCCEEEECCCCCC
Confidence 699999999653
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.08 E-value=2.5e-10 Score=110.69 Aligned_cols=84 Identities=11% Similarity=0.022 Sum_probs=70.1
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC------------hhHHHHHHHHhCCCCCCCccEEEEeC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN------------PTRVKQALQWASPSHSLSIPILTADT 76 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~------------~~kl~~l~~~l~~~~~~~v~~v~~Dl 76 (452)
+...++||||+|+||+++++.|+++| ++|++++|+ .++++++.+++.. ...++.++.+|+
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~ 80 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEG-------ADIILFDICHDIETNEYPLATSRDLEEAGLEVEK-TGRKAYTAEVDV 80 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHH-TTSCEEEEECCT
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCC-------CeEEEEcccccccccccchhhhHHHHHHHHHHHh-cCCceEEEEccC
Confidence 45689999999999999999999998 899999998 6666666555421 235788999999
Q ss_pred CCHHHHHHHHc-------CccEEeecCCCCC
Q 012947 77 TDPPSLHRLCS-------QTKLLLNCVGPYR 100 (452)
Q Consensus 77 ~d~~sl~~~~~-------~~dvVIn~aGp~~ 100 (452)
+|+++++++++ +.|+||||||...
T Consensus 81 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~ 111 (287)
T 3pxx_A 81 RDRAAVSRELANAVAEFGKLDVVVANAGICP 111 (287)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCcCc
Confidence 99999998887 7899999999754
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.08 E-value=5.9e-11 Score=119.25 Aligned_cols=83 Identities=18% Similarity=0.114 Sum_probs=67.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhH-------HHHHHHHhCCCCCCCccEEEEeCCCHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR-------VKQALQWASPSHSLSIPILTADTTDPPSL 82 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~k-------l~~l~~~l~~~~~~~v~~v~~Dl~d~~sl 82 (452)
...++||||+|+||+.+++.|+++| ++|++++|+.++ ++++.+++.. ...++.++.+|++|++++
T Consensus 45 gk~vlVTGas~GIG~aia~~La~~G-------a~Vvl~~r~~~~~~~l~~~l~~~~~~~~~-~g~~~~~~~~Dv~d~~~v 116 (346)
T 3kvo_A 45 GCTVFITGASRGIGKAIALKAAKDG-------ANIVIAAKTAQPHPKLLGTIYTAAEEIEA-VGGKALPCIVDVRDEQQI 116 (346)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTT-------CEEEEEESCCSCCSSSCCCHHHHHHHHHH-TTCEEEEEECCTTCHHHH
T ss_pred CCEEEEeCCChHHHHHHHHHHHHCC-------CEEEEEECChhhhhhhHHHHHHHHHHHHh-cCCeEEEEEccCCCHHHH
Confidence 4579999999999999999999998 899999999774 4444444421 234678899999999999
Q ss_pred HHHHc-------CccEEeecCCCCC
Q 012947 83 HRLCS-------QTKLLLNCVGPYR 100 (452)
Q Consensus 83 ~~~~~-------~~dvVIn~aGp~~ 100 (452)
+++++ +.|+||||||...
T Consensus 117 ~~~~~~~~~~~g~iDilVnnAG~~~ 141 (346)
T 3kvo_A 117 SAAVEKAIKKFGGIDILVNNASAIS 141 (346)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCC
Confidence 98887 7899999999643
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.08 E-value=3.9e-10 Score=113.01 Aligned_cols=85 Identities=15% Similarity=0.154 Sum_probs=64.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHH--cCCCCCCCceEEEEEecChhHHHH---HHHHhCC---CCCCCccEEEEeCCCHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALK--LFNFPSSPIKSLALAGRNPTRVKQ---ALQWASP---SHSLSIPILTADTTDPP 80 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~--~g~~~~~~~~~v~iagR~~~kl~~---l~~~l~~---~~~~~v~~v~~Dl~d~~ 80 (452)
+.++|+|||||||+|++++++|++ .| ++|++++|+...... ..+.+.. ....++.++.+|++|++
T Consensus 9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~ 81 (362)
T 3sxp_A 9 ENQTILITGGAGFVGSNLAFHFQENHPK-------AKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPL 81 (362)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCTT-------SEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhhCCC-------CeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHH
Confidence 457899999999999999999999 66 899999997652110 0000000 01346789999999999
Q ss_pred HHHHH-HcCccEEeecCCCCC
Q 012947 81 SLHRL-CSQTKLLLNCVGPYR 100 (452)
Q Consensus 81 sl~~~-~~~~dvVIn~aGp~~ 100 (452)
+++++ ..++|+||||||...
T Consensus 82 ~~~~~~~~~~D~vih~A~~~~ 102 (362)
T 3sxp_A 82 DLRRLEKLHFDYLFHQAAVSD 102 (362)
T ss_dssp HHHHHTTSCCSEEEECCCCCG
T ss_pred HHHHhhccCCCEEEECCccCC
Confidence 99999 889999999999643
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.07 E-value=2.1e-10 Score=113.19 Aligned_cols=85 Identities=13% Similarity=0.081 Sum_probs=69.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEE-EEeCCCHHHHHHHHc
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPIL-TADTTDPPSLHRLCS 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v-~~Dl~d~~sl~~~~~ 87 (452)
..++|+|||||||+|++++++|+++| ++|++.+|+.++.+.+.+.+......++.++ .+|++|+++++++++
T Consensus 10 ~~~~vlVTGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~ 82 (342)
T 1y1p_A 10 EGSLVLVTGANGFVASHVVEQLLEHG-------YKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK 82 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCC-------CEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHc
Confidence 34689999999999999999999998 8999999998887665543310001357777 799999999999999
Q ss_pred CccEEeecCCCCC
Q 012947 88 QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ~~dvVIn~aGp~~ 100 (452)
++|+||||||+..
T Consensus 83 ~~d~vih~A~~~~ 95 (342)
T 1y1p_A 83 GAAGVAHIASVVS 95 (342)
T ss_dssp TCSEEEECCCCCS
T ss_pred CCCEEEEeCCCCC
Confidence 9999999999764
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.07 E-value=5.4e-11 Score=113.70 Aligned_cols=84 Identities=12% Similarity=0.083 Sum_probs=66.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~- 88 (452)
...++||||+|+||++++++|+++| ++|++++|+.++.++..+++......++.++.+|++|++++++++++
T Consensus 14 ~k~vlITGasggiG~~~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 86 (265)
T 1h5q_A 14 NKTIIVTGGNRGIGLAFTRAVAAAG-------ANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQI 86 (265)
T ss_dssp TEEEEEETTTSHHHHHHHHHHHHTT-------EEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHH
Confidence 4579999999999999999999998 89999999766655444433100124678899999999999888763
Q ss_pred ------ccEEeecCCCCC
Q 012947 89 ------TKLLLNCVGPYR 100 (452)
Q Consensus 89 ------~dvVIn~aGp~~ 100 (452)
.|+||||||...
T Consensus 87 ~~~~~~id~li~~Ag~~~ 104 (265)
T 1h5q_A 87 DADLGPISGLIANAGVSV 104 (265)
T ss_dssp HHHSCSEEEEEECCCCCC
T ss_pred HHhcCCCCEEEECCCcCC
Confidence 899999999653
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.07 E-value=1.8e-11 Score=119.30 Aligned_cols=84 Identities=12% Similarity=0.058 Sum_probs=68.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh-------HHHHHHHHhCCCCCCCccEEEEeCCCHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-------RVKQALQWASPSHSLSIPILTADTTDPPS 81 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~-------kl~~l~~~l~~~~~~~v~~v~~Dl~d~~s 81 (452)
+...++||||+|+||+.++++|+++| ++|++++|+.+ +++++.+++.. ...++.++.+|++|+++
T Consensus 8 ~~k~vlVTGas~GIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~ 79 (285)
T 3sc4_A 8 RGKTMFISGGSRGIGLAIAKRVAADG-------ANVALVAKSAEPHPKLPGTIYTAAKEIEE-AGGQALPIVGDIRDGDA 79 (285)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHTTT-------CEEEEEESCCSCCSSSCCCHHHHHHHHHH-HTSEEEEEECCTTSHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEECChhhhhhhhHHHHHHHHHHHh-cCCcEEEEECCCCCHHH
Confidence 34679999999999999999999998 89999999976 34444444421 13467889999999999
Q ss_pred HHHHHc-------CccEEeecCCCCC
Q 012947 82 LHRLCS-------QTKLLLNCVGPYR 100 (452)
Q Consensus 82 l~~~~~-------~~dvVIn~aGp~~ 100 (452)
++++++ +.|+||||||...
T Consensus 80 v~~~~~~~~~~~g~id~lvnnAg~~~ 105 (285)
T 3sc4_A 80 VAAAVAKTVEQFGGIDICVNNASAIN 105 (285)
T ss_dssp HHHHHHHHHHHHSCCSEEEECCCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 998887 7899999999653
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.07 E-value=6.7e-11 Score=111.50 Aligned_cols=76 Identities=22% Similarity=0.264 Sum_probs=65.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCce--EEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIK--SLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~--~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
.++|+|+||||++|++++++|+++| + +|++++|+.+++++.. ..++.++.+|++|+++++++++
T Consensus 18 ~~~vlVtGasg~iG~~l~~~L~~~G-------~~~~V~~~~r~~~~~~~~~-------~~~~~~~~~D~~d~~~~~~~~~ 83 (242)
T 2bka_A 18 NKSVFILGASGETGRVLLKEILEQG-------LFSKVTLIGRRKLTFDEEA-------YKNVNQEVVDFEKLDDYASAFQ 83 (242)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHHT-------CCSEEEEEESSCCCCCSGG-------GGGCEEEECCGGGGGGGGGGGS
T ss_pred CCeEEEECCCcHHHHHHHHHHHcCC-------CCCEEEEEEcCCCCccccc-------cCCceEEecCcCCHHHHHHHhc
Confidence 3579999999999999999999998 6 9999999987653321 1256789999999999999999
Q ss_pred CccEEeecCCCC
Q 012947 88 QTKLLLNCVGPY 99 (452)
Q Consensus 88 ~~dvVIn~aGp~ 99 (452)
++|+||||||..
T Consensus 84 ~~d~vi~~ag~~ 95 (242)
T 2bka_A 84 GHDVGFCCLGTT 95 (242)
T ss_dssp SCSEEEECCCCC
T ss_pred CCCEEEECCCcc
Confidence 999999999964
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.07 E-value=4e-10 Score=110.37 Aligned_cols=80 Identities=15% Similarity=0.088 Sum_probs=65.4
Q ss_pred CCCeEEEEcCCch--HHHHHHHHHHHcCCCCCCCceEEEEEecChhHHH---HHHHHhCCCCCCCccEEEEeCCCHHHHH
Q 012947 9 ELFDVIILGASGF--TGKYVVREALKLFNFPSSPIKSLALAGRNPTRVK---QALQWASPSHSLSIPILTADTTDPPSLH 83 (452)
Q Consensus 9 ~~~~ilV~GATG~--iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~---~l~~~l~~~~~~~v~~v~~Dl~d~~sl~ 83 (452)
+...++||||+|+ ||+.+++.|+++| ++|++.+|+.+..+ ++.++. .++.++.+|++|+++++
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G-------~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~ 97 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAG-------AELAFTYQGDALKKRVEPLAEEL-----GAFVAGHCDVADAASID 97 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTT-------CEEEEEECSHHHHHHHHHHHHHH-----TCEEEEECCTTCHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCC-------CEEEEEcCCHHHHHHHHHHHHhc-----CCceEEECCCCCHHHHH
Confidence 4467999999987 9999999999998 89999999965433 333333 35788999999999999
Q ss_pred HHHc-------CccEEeecCCCCC
Q 012947 84 RLCS-------QTKLLLNCVGPYR 100 (452)
Q Consensus 84 ~~~~-------~~dvVIn~aGp~~ 100 (452)
++++ +.|+||||||...
T Consensus 98 ~~~~~~~~~~g~iD~lVnnAG~~~ 121 (293)
T 3grk_A 98 AVFETLEKKWGKLDFLVHAIGFSD 121 (293)
T ss_dssp HHHHHHHHHTSCCSEEEECCCCCC
T ss_pred HHHHHHHHhcCCCCEEEECCccCC
Confidence 8887 6899999999653
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.07 E-value=4.2e-10 Score=109.65 Aligned_cols=79 Identities=15% Similarity=0.146 Sum_probs=65.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
.++|+|+||||++|++++++|++++. ++|++++|+.++.+. +.+. ..++.++.+|++|++++.++++++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~------~~V~~~~R~~~~~~~--~~l~---~~~~~~~~~D~~d~~~l~~~~~~~ 73 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGT------FKVRVVTRNPRKKAA--KELR---LQGAEVVQGDQDDQVIMELALNGA 73 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCS------SEEEEEESCTTSHHH--HHHH---HTTCEEEECCTTCHHHHHHHHTTC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCC------ceEEEEEcCCCCHHH--HHHH---HCCCEEEEecCCCHHHHHHHHhcC
Confidence 36899999999999999999999872 689999999876532 1111 135789999999999999999999
Q ss_pred cEEeecCCCC
Q 012947 90 KLLLNCVGPY 99 (452)
Q Consensus 90 dvVIn~aGp~ 99 (452)
|+|||++|..
T Consensus 74 d~vi~~a~~~ 83 (299)
T 2wm3_A 74 YATFIVTNYW 83 (299)
T ss_dssp SEEEECCCHH
T ss_pred CEEEEeCCCC
Confidence 9999999853
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.07 E-value=4.9e-11 Score=115.57 Aligned_cols=83 Identities=16% Similarity=0.101 Sum_probs=67.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhH-------HHHHHHHhCCCCCCCccEEEEeCCCHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR-------VKQALQWASPSHSLSIPILTADTTDPPSL 82 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~k-------l~~l~~~l~~~~~~~v~~v~~Dl~d~~sl 82 (452)
...++||||+|+||+.++++|+++| ++|++++|+.++ ++++.+++.. ...++.++.+|++|++++
T Consensus 6 ~k~~lVTGas~GIG~aia~~la~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v 77 (274)
T 3e03_A 6 GKTLFITGASRGIGLAIALRAARDG-------ANVAIAAKSAVANPKLPGTIHSAAAAVNA-AGGQGLALKCDIREEDQV 77 (274)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCCSCCTTSCCCHHHHHHHHHH-HTSEEEEEECCTTCHHHH
T ss_pred CcEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeccchhhhhhHHHHHHHHHHHHh-cCCeEEEEeCCCCCHHHH
Confidence 4579999999999999999999998 899999998754 4444443321 134678899999999999
Q ss_pred HHHHc-------CccEEeecCCCCC
Q 012947 83 HRLCS-------QTKLLLNCVGPYR 100 (452)
Q Consensus 83 ~~~~~-------~~dvVIn~aGp~~ 100 (452)
+++++ +.|+||||||...
T Consensus 78 ~~~~~~~~~~~g~iD~lvnnAG~~~ 102 (274)
T 3e03_A 78 RAAVAATVDTFGGIDILVNNASAIW 102 (274)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCccc
Confidence 98876 6899999999653
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.07 E-value=3.2e-10 Score=113.92 Aligned_cols=103 Identities=15% Similarity=0.150 Sum_probs=80.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEe-CCCHHHHHHHHcC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTAD-TTDPPSLHRLCSQ 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~D-l~d~~sl~~~~~~ 88 (452)
.++|+|+||||++|++++++|++++ ++|++++|+.++... +.+. ...++.++.+| ++|++++.+++++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g-------~~V~~~~R~~~~~~~--~~l~--~~~~v~~v~~D~l~d~~~l~~~~~~ 73 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVG-------HHVRAQVHSLKGLIA--EELQ--AIPNVTLFQGPLLNNVPLMDTLFEG 73 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTT-------CCEEEEESCSCSHHH--HHHH--TSTTEEEEESCCTTCHHHHHHHHTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC-------CEEEEEECCCChhhH--HHHh--hcCCcEEEECCccCCHHHHHHHHhc
Confidence 3579999999999999999999987 789999998876521 1111 12367889999 9999999999999
Q ss_pred ccEEeecCCCCCC----CCHHHHHHHHHhC-C-cEEEecCc
Q 012947 89 TKLLLNCVGPYRL----HGDPVAAACVHSG-C-DYLDISGE 123 (452)
Q Consensus 89 ~dvVIn~aGp~~~----~~~~vv~ac~~~g-~-~yvDlsge 123 (452)
+|+|||+++.+.. .+.+++++|.+.+ + ++|.+|..
T Consensus 74 ~d~Vi~~a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~ 114 (352)
T 1xgk_A 74 AHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMP 114 (352)
T ss_dssp CSEEEECCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECC
T ss_pred CCEEEEcCCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCc
Confidence 9999999876521 2366778887777 5 66666643
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.07 E-value=1.2e-10 Score=113.31 Aligned_cols=81 Identities=11% Similarity=0.139 Sum_probs=69.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..++||||+|+||+.+++.|+++| .+|++.+|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 45 k~vlITGasggIG~~la~~L~~~G-------~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~ 116 (285)
T 2c07_A 45 KVALVTGAGRGIGREIAKMLAKSV-------SHVICISRTQKSCDSVVDEIKS-FGYESSGYAGDVSKKEEISEVINKIL 116 (285)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTTS-------SEEEEEESSHHHHHHHHHHHHT-TTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHcC-------CEEEEEcCCHHHHHHHHHHHHh-cCCceeEEECCCCCHHHHHHHHHHHH
Confidence 579999999999999999999988 7999999999988887776632 13467889999999999998875
Q ss_pred ----CccEEeecCCCC
Q 012947 88 ----QTKLLLNCVGPY 99 (452)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (452)
++|+||||||..
T Consensus 117 ~~~~~id~li~~Ag~~ 132 (285)
T 2c07_A 117 TEHKNVDILVNNAGIT 132 (285)
T ss_dssp HHCSCCCEEEECCCCC
T ss_pred HhcCCCCEEEECCCCC
Confidence 689999999964
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.07 E-value=7.9e-11 Score=113.38 Aligned_cols=83 Identities=14% Similarity=0.105 Sum_probs=69.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEE-EecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLAL-AGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~i-agR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++||||+|+||+.++++|+++| ++|++ ..|+.+++++..+++.. ...++.++.+|++|+++++++++
T Consensus 26 ~k~vlVTGas~gIG~~la~~l~~~G-------~~v~i~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~~~~~~~~ 97 (267)
T 4iiu_A 26 SRSVLVTGASKGIGRAIARQLAADG-------FNIGVHYHRDAAGAQETLNAIVA-NGGNGRLLSFDVANREQCREVLEH 97 (267)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTT-------CEEEEEESSCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCchHHHHHHHHHHHh-cCCceEEEEecCCCHHHHHHHHHH
Confidence 3579999999999999999999998 78855 56888888777766632 23578899999999999998887
Q ss_pred ------CccEEeecCCCCC
Q 012947 88 ------QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (452)
+.|+||||||...
T Consensus 98 ~~~~~g~id~li~nAg~~~ 116 (267)
T 4iiu_A 98 EIAQHGAWYGVVSNAGIAR 116 (267)
T ss_dssp HHHHHCCCSEEEECCCCCC
T ss_pred HHHHhCCccEEEECCCCCC
Confidence 7899999999654
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.07 E-value=1.5e-10 Score=114.62 Aligned_cols=81 Identities=20% Similarity=0.252 Sum_probs=65.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHH--HHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQA--LQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l--~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
.++|+|||||||||++++++|+++| ++|++..|+.++.+.. ...+. ...++.++.+|++|++++.++++
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G-------~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~ 79 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKG-------YAVNTTVRDPDNQKKVSHLLELQ--ELGDLKIFRADLTDELSFEAPIA 79 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTT-------CEEEEEESCTTCTTTTHHHHHHG--GGSCEEEEECCTTTSSSSHHHHT
T ss_pred CCEEEEECCchHHHHHHHHHHHHCC-------CEEEEEEcCcchhhhHHHHHhcC--CCCcEEEEecCCCChHHHHHHHc
Confidence 4689999999999999999999998 7999889986642211 11221 12357889999999999999999
Q ss_pred CccEEeecCCCC
Q 012947 88 QTKLLLNCVGPY 99 (452)
Q Consensus 88 ~~dvVIn~aGp~ 99 (452)
++|+|||+|++.
T Consensus 80 ~~D~Vih~A~~~ 91 (338)
T 2rh8_A 80 GCDFVFHVATPV 91 (338)
T ss_dssp TCSEEEEESSCC
T ss_pred CCCEEEEeCCcc
Confidence 999999999875
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.06 E-value=8.1e-11 Score=113.04 Aligned_cols=83 Identities=12% Similarity=0.032 Sum_probs=70.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR-~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++|+||+|++|++++++|+++| ++|++.+| +.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 21 ~k~vlItGasggiG~~la~~l~~~G-------~~v~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~ 92 (274)
T 1ja9_A 21 GKVALTTGAGRGIGRGIAIELGRRG-------ASVVVNYGSSSKAAEEVVAELKK-LGAQGVAIQADISKPSEVVALFDK 92 (274)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTT-------CEEEEEESSCHHHHHHHHHHHHH-TTCCEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEcCCchHHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHH
Confidence 4679999999999999999999998 79999999 88888777665531 13467889999999999999887
Q ss_pred ------CccEEeecCCCCC
Q 012947 88 ------QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (452)
++|+||||||...
T Consensus 93 ~~~~~~~~d~vi~~Ag~~~ 111 (274)
T 1ja9_A 93 AVSHFGGLDFVMSNSGMEV 111 (274)
T ss_dssp HHHHHSCEEEEECCCCCCC
T ss_pred HHHHcCCCCEEEECCCCCC
Confidence 7899999999653
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.06 E-value=8.9e-11 Score=116.46 Aligned_cols=83 Identities=14% Similarity=0.031 Sum_probs=70.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC----------hhHHHHHHHHhCCCCCCCccEEEEeCCCH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN----------PTRVKQALQWASPSHSLSIPILTADTTDP 79 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~----------~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~ 79 (452)
...++||||+|+||+++++.|+++| ++|++++|+ .++++++.+++.. ...++.++.+|++|+
T Consensus 27 gk~vlVTGas~GIG~aia~~la~~G-------~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~d~ 98 (322)
T 3qlj_A 27 GRVVIVTGAGGGIGRAHALAFAAEG-------ARVVVNDIGVGLDGSPASGGSAAQSVVDEITA-AGGEAVADGSNVADW 98 (322)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTT-------CEEEEECCCBCTTSSBTCTTSHHHHHHHHHHH-TTCEEEEECCCTTSH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCcccccccccccHHHHHHHHHHHHh-cCCcEEEEECCCCCH
Confidence 4579999999999999999999998 899999998 6777777666632 134677889999999
Q ss_pred HHHHHHHc-------CccEEeecCCCCC
Q 012947 80 PSLHRLCS-------QTKLLLNCVGPYR 100 (452)
Q Consensus 80 ~sl~~~~~-------~~dvVIn~aGp~~ 100 (452)
++++++++ +.|+||||||...
T Consensus 99 ~~v~~~~~~~~~~~g~iD~lv~nAg~~~ 126 (322)
T 3qlj_A 99 DQAAGLIQTAVETFGGLDVLVNNAGIVR 126 (322)
T ss_dssp HHHHHHHHHHHHHHSCCCEEECCCCCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 99998887 7899999999654
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.06 E-value=6.7e-10 Score=107.93 Aligned_cols=82 Identities=13% Similarity=0.129 Sum_probs=68.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||++++++|+++| ++|++++|+.++++++.+++......++.++.+|++|+++++++++
T Consensus 28 ~k~vlITGasggIG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~ 100 (286)
T 1xu9_A 28 GKKVIVTGASKGIGREMAYHLAKMG-------AHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQA 100 (286)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 8999999999998877665421011357889999999999988876
Q ss_pred -----CccEEeec-CCC
Q 012947 88 -----QTKLLLNC-VGP 98 (452)
Q Consensus 88 -----~~dvVIn~-aGp 98 (452)
+.|+|||| +|.
T Consensus 101 ~~~~g~iD~li~naag~ 117 (286)
T 1xu9_A 101 GKLMGGLDMLILNHITN 117 (286)
T ss_dssp HHHHTSCSEEEECCCCC
T ss_pred HHHcCCCCEEEECCccC
Confidence 68999999 564
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.06 E-value=5.1e-11 Score=112.58 Aligned_cols=82 Identities=15% Similarity=0.104 Sum_probs=68.1
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEE-EecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLAL-AGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~i-agR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..++|+||+|++|++++++|+++| ++|++ .+|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 2 k~vlVTGasggiG~~la~~l~~~G-------~~v~~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 73 (244)
T 1edo_A 2 PVVVVTGASRGIGKAIALSLGKAG-------CKVLVNYARSAKAAEEVSKQIEA-YGGQAITFGGDVSKEADVEAMMKTA 73 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTT-------CEEEEEESSCHHHHHHHHHHHHH-HTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEcCCCHHHHHHHHHHHHh-cCCcEEEEeCCCCCHHHHHHHHHHH
Confidence 369999999999999999999998 78888 58998888776665521 12357788999999999999887
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
++|+||||||...
T Consensus 74 ~~~~g~id~li~~Ag~~~ 91 (244)
T 1edo_A 74 IDAWGTIDVVVNNAGITR 91 (244)
T ss_dssp HHHSSCCSEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 6899999999653
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=2.8e-10 Score=112.95 Aligned_cols=82 Identities=13% Similarity=0.221 Sum_probs=64.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhH-HHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR-VKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~k-l~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
++|+|||||||+|++++++|+++++ .++|++.+|+... ..+..+++. ..++.++.+|++|++++.++++++
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~-----g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~ 76 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHP-----DVHVTVLDKLTYAGNKANLEAIL---GDRVELVVGDIADAELVDKLAAKA 76 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCT-----TCEEEEEECCCTTCCGGGTGGGC---SSSEEEEECCTTCHHHHHHHHTTC
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCC-----CCEEEEEeCCCCCCChhHHhhhc---cCCeEEEECCCCCHHHHHHHhhcC
Confidence 5899999999999999999999831 1799999996521 111112221 246788999999999999999999
Q ss_pred cEEeecCCCCC
Q 012947 90 KLLLNCVGPYR 100 (452)
Q Consensus 90 dvVIn~aGp~~ 100 (452)
|+||||||+..
T Consensus 77 d~vih~A~~~~ 87 (348)
T 1oc2_A 77 DAIVHYAAESH 87 (348)
T ss_dssp SEEEECCSCCC
T ss_pred CEEEECCcccC
Confidence 99999999653
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=7.2e-10 Score=107.53 Aligned_cols=79 Identities=11% Similarity=0.051 Sum_probs=66.8
Q ss_pred CCeEEEEcCCch--HHHHHHHHHHHcCCCCCCCceEEEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 012947 10 LFDVIILGASGF--TGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 10 ~~~ilV~GATG~--iG~~va~~L~~~g~~~~~~~~~v~iagR~~--~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
...++||||+|+ ||+.+++.|+++| ++|++.+|+. +.++++.++. .++.++.+|++|+++++++
T Consensus 26 ~k~vlVTGasg~~GIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~l~~~~-----~~~~~~~~Dl~~~~~v~~~ 93 (280)
T 3nrc_A 26 GKKILITGLLSNKSIAYGIAKAMHREG-------AELAFTYVGQFKDRVEKLCAEF-----NPAAVLPCDVISDQEIKDL 93 (280)
T ss_dssp TCEEEECCCCSTTCHHHHHHHHHHHTT-------CEEEEEECTTCHHHHHHHHGGG-----CCSEEEECCTTCHHHHHHH
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHcC-------CEEEEeeCchHHHHHHHHHHhc-----CCceEEEeecCCHHHHHHH
Confidence 467999999966 9999999999998 8999999987 6666665544 3578999999999999988
Q ss_pred Hc-------CccEEeecCCCCC
Q 012947 86 CS-------QTKLLLNCVGPYR 100 (452)
Q Consensus 86 ~~-------~~dvVIn~aGp~~ 100 (452)
++ +.|+||||||...
T Consensus 94 ~~~~~~~~g~id~li~nAg~~~ 115 (280)
T 3nrc_A 94 FVELGKVWDGLDAIVHSIAFAP 115 (280)
T ss_dssp HHHHHHHCSSCCEEEECCCCCC
T ss_pred HHHHHHHcCCCCEEEECCccCC
Confidence 86 4699999999654
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=99.05 E-value=9.1e-11 Score=112.74 Aligned_cols=84 Identities=11% Similarity=0.008 Sum_probs=69.9
Q ss_pred CCCeEEEEcCCc--hHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 012947 9 ELFDVIILGASG--FTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 9 ~~~~ilV~GATG--~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
+...++||||+| +||+.+++.|+++| ++|++.+|++++++++.+.+......++..+.+|++|++++++++
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~G-------a~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 77 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLG-------AKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGF 77 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTT-------CEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHH
Confidence 346899999987 89999999999999 899999999988877766653212346788999999999998877
Q ss_pred c-------CccEEeecCCCC
Q 012947 87 S-------QTKLLLNCVGPY 99 (452)
Q Consensus 87 ~-------~~dvVIn~aGp~ 99 (452)
+ +.|++|||||..
T Consensus 78 ~~~~~~~G~iD~lvnnAg~~ 97 (256)
T 4fs3_A 78 EQIGKDVGNIDGVYHSIAFA 97 (256)
T ss_dssp HHHHHHHCCCSEEEECCCCC
T ss_pred HHHHHHhCCCCEEEeccccc
Confidence 6 689999999854
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=3.6e-10 Score=112.66 Aligned_cols=83 Identities=14% Similarity=0.177 Sum_probs=67.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh----hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP----TRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~----~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
.++|+|||||||+|++++++|++.| ++|++++|+. ++++.+.+.+......++.++.+|++|++++.++
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 99 (352)
T 1sb8_A 27 PKVWLITGVAGFIGSNLLETLLKLD-------QKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNA 99 (352)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHH
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHH
Confidence 3689999999999999999999998 7999999965 3455554433100014678999999999999999
Q ss_pred HcCccEEeecCCCC
Q 012947 86 CSQTKLLLNCVGPY 99 (452)
Q Consensus 86 ~~~~dvVIn~aGp~ 99 (452)
++++|+||||||+.
T Consensus 100 ~~~~d~vih~A~~~ 113 (352)
T 1sb8_A 100 CAGVDYVLHQAALG 113 (352)
T ss_dssp HTTCSEEEECCSCC
T ss_pred hcCCCEEEECCccc
Confidence 99999999999964
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=7.6e-10 Score=106.70 Aligned_cols=111 Identities=11% Similarity=-0.010 Sum_probs=78.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+++||+.+++.|+++| .+|++.+|+.++.+.+ +++.. ...++..+.+|++|+++++++++
T Consensus 7 gKvalVTGas~GIG~aia~~la~~G-------a~Vv~~~r~~~~~~~~-~~~~~-~~~~~~~~~~Dv~~~~~v~~~v~~~ 77 (258)
T 4gkb_A 7 DKVVIVTGGASGIGGAISMRLAEER-------AIPVVFARHAPDGAFL-DALAQ-RQPRATYLPVELQDDAQCRDAVAQT 77 (258)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESSCCCHHHH-HHHHH-HCTTCEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcC-------CEEEEEECCcccHHHH-HHHHh-cCCCEEEEEeecCCHHHHHHHHHHH
Confidence 4679999999999999999999999 8999999987765432 22210 13578899999999999988876
Q ss_pred -----CccEEeecCCCCCCC----CHHHHHHHHHhCCcEEEecCcHHHHHHHHHHH
Q 012947 88 -----QTKLLLNCVGPYRLH----GDPVAAACVHSGCDYLDISGEPEFMERMEARY 134 (452)
Q Consensus 88 -----~~dvVIn~aGp~~~~----~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~ 134 (452)
+.|++|||||..... .....+...+ +++.+....++..++.+
T Consensus 78 ~~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~-----vNl~g~~~~~~~~~p~m 128 (258)
T 4gkb_A 78 IATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLE-----RNLIHYYAMAHYCVPHL 128 (258)
T ss_dssp HHHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHH-----HHTHHHHHHHHHHHHHH
T ss_pred HHHhCCCCEEEECCCCCCCCCccCCHHHHHHHHH-----HHhHHHHHHHHHHHHHH
Confidence 579999999964322 1222332222 34555555566665544
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.05 E-value=5.8e-11 Score=114.78 Aligned_cols=83 Identities=17% Similarity=0.135 Sum_probs=68.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEE-ecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~ia-gR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++||||+|+||+++++.|+++| ++|++. .|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 27 ~k~~lVTGas~GIG~aia~~la~~G-------~~Vv~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~ 98 (267)
T 3u5t_A 27 NKVAIVTGASRGIGAAIAARLASDG-------FTVVINYAGKAAAAEEVAGKIEA-AGGKALTAQADVSDPAAVRRLFAT 98 (267)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHT-------CEEEEEESSCSHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEcCCCHHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHH
Confidence 4579999999999999999999999 788887 5677777776665532 23567889999999999998887
Q ss_pred ------CccEEeecCCCCC
Q 012947 88 ------QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (452)
+.|+||||||...
T Consensus 99 ~~~~~g~iD~lvnnAG~~~ 117 (267)
T 3u5t_A 99 AEEAFGGVDVLVNNAGIMP 117 (267)
T ss_dssp HHHHHSCEEEEEECCCCCC
T ss_pred HHHHcCCCCEEEECCCCCC
Confidence 6899999999653
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=8.1e-11 Score=115.06 Aligned_cols=83 Identities=13% Similarity=0.123 Sum_probs=70.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEe-cChhHHHHHHHHhCCCCCCCccEEEEeCCCHH--------
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAG-RNPTRVKQALQWASPSHSLSIPILTADTTDPP-------- 80 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iag-R~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~-------- 80 (452)
...++||||+|+||+.+++.|+++| ++|++++ |+.++++++.+++......++.++.+|++|++
T Consensus 9 ~k~~lVTGas~GIG~aia~~la~~G-------~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 81 (291)
T 1e7w_A 9 VPVALVTGAAKRLGRSIAEGLHAEG-------YAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGAD 81 (291)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTT-------CEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC---
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccc
Confidence 3579999999999999999999998 8999999 99999888777652001346788999999999
Q ss_pred ---------HHHHHHc-------CccEEeecCCCC
Q 012947 81 ---------SLHRLCS-------QTKLLLNCVGPY 99 (452)
Q Consensus 81 ---------sl~~~~~-------~~dvVIn~aGp~ 99 (452)
+++++++ +.|+||||||..
T Consensus 82 ~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~ 116 (291)
T 1e7w_A 82 GSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSF 116 (291)
T ss_dssp -CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred cccccchHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 8888876 789999999964
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.05 E-value=8.6e-11 Score=112.44 Aligned_cols=137 Identities=12% Similarity=0.067 Sum_probs=89.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh-HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~-kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++||||+++||+.+++.|+++| .+|++.+|+.+ +..+..++. ..++..+.+|++|+++++++++
T Consensus 9 GKvalVTGas~GIG~aiA~~la~~G-------a~Vvi~~r~~~~~~~~~~~~~----g~~~~~~~~Dv~d~~~v~~~~~~ 77 (247)
T 4hp8_A 9 GRKALVTGANTGLGQAIAVGLAAAG-------AEVVCAARRAPDETLDIIAKD----GGNASALLIDFADPLAAKDSFTD 77 (247)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTT-------CEEEEEESSCCHHHHHHHHHT----TCCEEEEECCTTSTTTTTTSSTT
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHcC-------CEEEEEeCCcHHHHHHHHHHh----CCcEEEEEccCCCHHHHHHHHHh
Confidence 4579999999999999999999999 89999999853 222333333 3578899999999999888876
Q ss_pred -CccEEeecCCCCCCC-----CHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHh-CccEEE--cCCCCCcchhhH
Q 012947 88 -QTKLLLNCVGPYRLH-----GDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVE-TGSLLV--SACGFDSIPAEL 158 (452)
Q Consensus 88 -~~dvVIn~aGp~~~~-----~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~-~gv~iv--~~~G~~s~P~dl 158 (452)
+.|++|||||..... .+...+...+ +++.|....++..++.+. .+. .|.+|. |..|+.+.|. .
T Consensus 78 g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~-----vNl~g~f~~~~~~~~~m~--~~g~~G~IVnisS~~~~~g~~~-~ 149 (247)
T 4hp8_A 78 AGFDILVNNAGIIRRADSVEFSELDWDEVMD-----VNLKALFFTTQAFAKELL--AKGRSGKVVNIASLLSFQGGIR-V 149 (247)
T ss_dssp TCCCEEEECCCCCCCCCGGGCCHHHHHHHHH-----HHTHHHHHHHHHHHHHHH--HHTCCEEEEEECCGGGTSCCSS-C
T ss_pred CCCCEEEECCCCCCCCCcccccHHHHHHHHH-----HHhHHHHHHHHHHHHHHH--HhCCCcEEEEEechhhCCCCCC-C
Confidence 589999999965432 2223333332 455565666666544443 333 243332 3335444442 3
Q ss_pred HHHHHhh
Q 012947 159 GVMFNSR 165 (452)
Q Consensus 159 ~~~~~~~ 165 (452)
.+|.++|
T Consensus 150 ~~Y~asK 156 (247)
T 4hp8_A 150 PSYTAAK 156 (247)
T ss_dssp HHHHHHH
T ss_pred hHHHHHH
Confidence 4454443
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.05 E-value=1e-10 Score=113.03 Aligned_cols=82 Identities=16% Similarity=0.089 Sum_probs=67.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~- 88 (452)
...++|+||+|+||++++++|+++| ++|++.+|+.++++++.+.+.. ...++.++.+|++|++++++++++
T Consensus 34 ~k~vlITGasggIG~~la~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~ 105 (279)
T 3ctm_A 34 GKVASVTGSSGGIGWAVAEAYAQAG-------ADVAIWYNSHPADEKAEHLQKT-YGVHSKAYKCNISDPKSVEETISQQ 105 (279)
T ss_dssp TCEEEETTTTSSHHHHHHHHHHHHT-------CEEEEEESSSCCHHHHHHHHHH-HCSCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCcceEEEeecCCHHHHHHHHHHH
Confidence 4579999999999999999999998 8999999998776655544311 124678899999999999988864
Q ss_pred ------ccEEeecCCCC
Q 012947 89 ------TKLLLNCVGPY 99 (452)
Q Consensus 89 ------~dvVIn~aGp~ 99 (452)
+|+||||||..
T Consensus 106 ~~~~g~id~li~~Ag~~ 122 (279)
T 3ctm_A 106 EKDFGTIDVFVANAGVT 122 (279)
T ss_dssp HHHHSCCSEEEECGGGS
T ss_pred HHHhCCCCEEEECCccc
Confidence 89999999854
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=6.3e-10 Score=110.16 Aligned_cols=81 Identities=23% Similarity=0.293 Sum_probs=64.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHH--HhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQ--WASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~--~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
.+|+|||||||||++++++|+++| ++|++..|+.++.+++.. ++.. ...++.++.+|++|++++++++++
T Consensus 6 ~~vlVTGatGfIG~~l~~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~ 77 (337)
T 2c29_D 6 ETVCVTGASGFIGSWLVMRLLERG-------YTVRATVRDPTNVKKVKHLLDLPK-AETHLTLWKADLADEGSFDEAIKG 77 (337)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT-------CEEEEEESCTTCHHHHHHHHTSTT-HHHHEEEEECCTTSTTTTHHHHTT
T ss_pred CEEEEECCchHHHHHHHHHHHHCC-------CEEEEEECCcchhHHHHHHHhccc-CCCeEEEEEcCCCCHHHHHHHHcC
Confidence 579999999999999999999998 799999998774432221 1210 012467889999999999999999
Q ss_pred ccEEeecCCCC
Q 012947 89 TKLLLNCVGPY 99 (452)
Q Consensus 89 ~dvVIn~aGp~ 99 (452)
+|+|||+|++.
T Consensus 78 ~d~Vih~A~~~ 88 (337)
T 2c29_D 78 CTGVFHVATPM 88 (337)
T ss_dssp CSEEEECCCCC
T ss_pred CCEEEEecccc
Confidence 99999999975
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.04 E-value=1.2e-10 Score=112.85 Aligned_cols=83 Identities=14% Similarity=0.126 Sum_probs=68.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR-~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++||||+|+||+++++.|+++| ++|++.+| +.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 31 gk~~lVTGas~GIG~aia~~la~~G-------~~V~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~Dv~d~~~v~~~~~~ 102 (271)
T 3v2g_A 31 GKTAFVTGGSRGIGAAIAKRLALEG-------AAVALTYVNAAERAQAVVSEIEQ-AGGRAVAIRADNRDAEAIEQAIRE 102 (271)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESSCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCCHHHHHHHHHHHHh-cCCcEEEEECCCCCHHHHHHHHHH
Confidence 4579999999999999999999998 78988865 45667776666532 23567889999999999998887
Q ss_pred ------CccEEeecCCCCC
Q 012947 88 ------QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (452)
+.|+||||||...
T Consensus 103 ~~~~~g~iD~lvnnAg~~~ 121 (271)
T 3v2g_A 103 TVEALGGLDILVNSAGIWH 121 (271)
T ss_dssp HHHHHSCCCEEEECCCCCC
T ss_pred HHHHcCCCcEEEECCCCCC
Confidence 7899999999653
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.04 E-value=1.4e-10 Score=115.54 Aligned_cols=83 Identities=13% Similarity=0.123 Sum_probs=70.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEe-cChhHHHHHHHHhCCCCCCCccEEEEeCCCHH--------
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAG-RNPTRVKQALQWASPSHSLSIPILTADTTDPP-------- 80 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iag-R~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~-------- 80 (452)
...++||||+|+||+.+++.|+++| ++|++++ |+.++++++.+++......++.++.+|++|++
T Consensus 46 ~k~~lVTGas~GIG~aia~~La~~G-------~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 118 (328)
T 2qhx_A 46 VPVALVTGAAKRLGRSIAEGLHAEG-------YAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGAD 118 (328)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTT-------CEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-----
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccc
Confidence 3579999999999999999999998 8999999 99999888777652001346788999999999
Q ss_pred ---------HHHHHHc-------CccEEeecCCCC
Q 012947 81 ---------SLHRLCS-------QTKLLLNCVGPY 99 (452)
Q Consensus 81 ---------sl~~~~~-------~~dvVIn~aGp~ 99 (452)
+++++++ +.|+||||||..
T Consensus 119 ~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~ 153 (328)
T 2qhx_A 119 GSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSF 153 (328)
T ss_dssp --CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred cccccccHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 8888876 789999999964
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.04 E-value=1.6e-10 Score=114.78 Aligned_cols=84 Identities=10% Similarity=0.214 Sum_probs=64.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh--HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT--RVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~--kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
..++|+|||||||+|++++++|+++|. .++|++.+|+.. ..+.+ +.+. ...++.++.+|++|++++.+++
T Consensus 23 ~~~~vlVtGatG~iG~~l~~~L~~~g~-----~~~v~~~~~~~~~~~~~~l-~~~~--~~~~~~~~~~Dl~d~~~~~~~~ 94 (346)
T 4egb_A 23 NAMNILVTGGAGFIGSNFVHYMLQSYE-----TYKIINFDALTYSGNLNNV-KSIQ--DHPNYYFVKGEIQNGELLEHVI 94 (346)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHHCT-----TEEEEEEECCCTTCCGGGG-TTTT--TCTTEEEEECCTTCHHHHHHHH
T ss_pred CCCeEEEECCccHHHHHHHHHHHhhCC-----CcEEEEEeccccccchhhh-hhhc--cCCCeEEEEcCCCCHHHHHHHH
Confidence 457899999999999999999999983 267777777542 22111 1111 1357899999999999999999
Q ss_pred cC--ccEEeecCCCCC
Q 012947 87 SQ--TKLLLNCVGPYR 100 (452)
Q Consensus 87 ~~--~dvVIn~aGp~~ 100 (452)
++ +|+||||||+..
T Consensus 95 ~~~~~d~Vih~A~~~~ 110 (346)
T 4egb_A 95 KERDVQVIVNFAAESH 110 (346)
T ss_dssp HHHTCCEEEECCCCC-
T ss_pred hhcCCCEEEECCcccc
Confidence 87 999999999653
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.04 E-value=6e-10 Score=106.73 Aligned_cols=80 Identities=20% Similarity=0.240 Sum_probs=64.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh-HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~-kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..++||||+|+||++++++|+++| ++|++++|+.+ .++.+.+.+.. ...++.++.+|++|+++++++++
T Consensus 8 k~vlVTGas~gIG~~~a~~l~~~G-------~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~ 79 (264)
T 3i4f_A 8 RHALITAGTKGLGKQVTEKLLAKG-------YSVTVTYHSDTTAMETMKETYKD-VEERLQFVQADVTKKEDLHKIVEEA 79 (264)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT-------CEEEEEESSCHHHHHHHHHHTGG-GGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CEEEEeCCCchhHHHHHHHHHHCC-------CEEEEEcCCChHHHHHHHHHHHh-cCCceEEEEecCCCHHHHHHHHHHH
Confidence 479999999999999999999998 79999877654 44444444321 12467899999999999999887
Q ss_pred -----CccEEeecCCC
Q 012947 88 -----QTKLLLNCVGP 98 (452)
Q Consensus 88 -----~~dvVIn~aGp 98 (452)
+.|+||||||+
T Consensus 80 ~~~~g~id~lv~~Ag~ 95 (264)
T 3i4f_A 80 MSHFGKIDFLINNAGP 95 (264)
T ss_dssp HHHHSCCCEEECCCCC
T ss_pred HHHhCCCCEEEECCcc
Confidence 78999999994
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.04 E-value=7.7e-11 Score=111.26 Aligned_cols=80 Identities=20% Similarity=0.192 Sum_probs=66.8
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEE-ecChhHHHHHHHHhCCCCCCCccE-EEEeCCCHHHHHHHHc--
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWASPSHSLSIPI-LTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~ia-gR~~~kl~~l~~~l~~~~~~~v~~-v~~Dl~d~~sl~~~~~-- 87 (452)
+++|+||+|++|++++++|+++| ++|++. +|+.++++++.+++.. ...++.. +.+|++|+++++++++
T Consensus 3 ~vlITGasggiG~~~a~~l~~~G-------~~v~~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~ 74 (245)
T 2ph3_A 3 KALITGASRGIGRAIALRLAEDG-------FALAIHYGQNREKAEEVAEEARR-RGSPLVAVLGANLLEAEAATALVHQA 74 (245)
T ss_dssp EEEETTTTSHHHHHHHHHHHTTT-------CEEEEEESSCHHHHHHHHHHHHH-TTCSCEEEEECCTTSHHHHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCC-------CEEEEEcCCCHHHHHHHHHHHHh-cCCceEEEEeccCCCHHHHHHHHHHH
Confidence 69999999999999999999998 789887 8999988877665531 1234556 8899999999988865
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
++|+||||||..
T Consensus 75 ~~~~~~~d~li~~Ag~~ 91 (245)
T 2ph3_A 75 AEVLGGLDTLVNNAGIT 91 (245)
T ss_dssp HHHHTCCCEEEECCCCC
T ss_pred HHhcCCCCEEEECCCCC
Confidence 789999999964
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=1.8e-10 Score=111.91 Aligned_cols=83 Identities=11% Similarity=0.046 Sum_probs=66.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhH-HHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR-VKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~k-l~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++||||+|+||++++++|+++| ++|++.+|+.++ ++++.+++.. ...++.++.+|++|+++++++++
T Consensus 29 ~k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~ 100 (283)
T 1g0o_A 29 GKVALVTGAGRGIGREMAMELGRRG-------CKVIVNYANSTESAEEVVAAIKK-NGSDAACVKANVGVVEDIVRMFEE 100 (283)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTT-------CEEEEEESSCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCchHHHHHHHHHHHH-hCCCeEEEEcCCCCHHHHHHHHHH
Confidence 3579999999999999999999998 899999998754 4444444421 13467889999999999988775
Q ss_pred ------CccEEeecCCCCC
Q 012947 88 ------QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (452)
+.|+||||||...
T Consensus 101 ~~~~~g~iD~lv~~Ag~~~ 119 (283)
T 1g0o_A 101 AVKIFGKLDIVCSNSGVVS 119 (283)
T ss_dssp HHHHHSCCCEEEECCCCCC
T ss_pred HHHHcCCCCEEEECCCcCC
Confidence 6899999999653
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.04 E-value=8.5e-10 Score=106.83 Aligned_cols=77 Identities=14% Similarity=0.079 Sum_probs=69.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||++++++|+++| ++|++++|+.++++++.++++ .++.++.+|++|.++++++++
T Consensus 30 ~k~vlVTGas~GIG~aia~~l~~~G-------~~Vi~~~r~~~~~~~~~~~~~----~~~~~~~~Dl~~~~~v~~~~~~~ 98 (281)
T 3ppi_A 30 GASAIVSGGAGGLGEATVRRLHADG-------LGVVIADLAAEKGKALADELG----NRAEFVSTNVTSEDSVLAAIEAA 98 (281)
T ss_dssp TEEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHC----TTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCChHHHHHHHHHhC----CceEEEEcCCCCHHHHHHHHHHH
Confidence 3569999999999999999999998 899999999999999988874 478899999999999999887
Q ss_pred ----CccEEeecCC
Q 012947 88 ----QTKLLLNCVG 97 (452)
Q Consensus 88 ----~~dvVIn~aG 97 (452)
+.|+||||++
T Consensus 99 ~~~~~id~lv~~aa 112 (281)
T 3ppi_A 99 NQLGRLRYAVVAHG 112 (281)
T ss_dssp TTSSEEEEEEECCC
T ss_pred HHhCCCCeEEEccC
Confidence 5799999943
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=4.3e-10 Score=113.66 Aligned_cols=77 Identities=10% Similarity=0.044 Sum_probs=65.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
.++|+|+|||||+|++++++|++++ ++|++++|+..+..... ..++.++.+|++|++++.++++++
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~-------~~~v~~~~~Dl~d~~~~~~~~~~~ 94 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKHEG-------HYVIASDWKKNEHMTED-------MFCDEFHLVDLRVMENCLKVTEGV 94 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESSCCSSSCGG-------GTCSEEEECCTTSHHHHHHHHTTC
T ss_pred CCeEEEECCccHHHHHHHHHHHHCC-------CeEEEEECCCccchhhc-------cCCceEEECCCCCHHHHHHHhCCC
Confidence 4689999999999999999999998 79999999876532111 236789999999999999999999
Q ss_pred cEEeecCCCCC
Q 012947 90 KLLLNCVGPYR 100 (452)
Q Consensus 90 dvVIn~aGp~~ 100 (452)
|+||||||+..
T Consensus 95 d~Vih~A~~~~ 105 (379)
T 2c5a_A 95 DHVFNLAADMG 105 (379)
T ss_dssp SEEEECCCCCC
T ss_pred CEEEECceecC
Confidence 99999999653
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.03 E-value=3.1e-10 Score=112.48 Aligned_cols=79 Identities=13% Similarity=0.197 Sum_probs=64.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~- 88 (452)
.++|+|||||||+|++++++|+++| ++|++++|+.....+ .+. ...++.++.+|++|++++++++++
T Consensus 21 ~~~vlVTGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~---~l~--~~~~~~~~~~Dl~d~~~~~~~~~~~ 88 (333)
T 2q1w_A 21 MKKVFITGICGQIGSHIAELLLERG-------DKVVGIDNFATGRRE---HLK--DHPNLTFVEGSIADHALVNQLIGDL 88 (333)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECCSSCCGG---GSC--CCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCC-------CEEEEEECCCccchh---hHh--hcCCceEEEEeCCCHHHHHHHHhcc
Confidence 4689999999999999999999998 799999997643211 111 013678899999999999999988
Q ss_pred -ccEEeecCCCCC
Q 012947 89 -TKLLLNCVGPYR 100 (452)
Q Consensus 89 -~dvVIn~aGp~~ 100 (452)
+|+||||||...
T Consensus 89 ~~D~vih~A~~~~ 101 (333)
T 2q1w_A 89 QPDAVVHTAASYK 101 (333)
T ss_dssp CCSEEEECCCCCS
T ss_pred CCcEEEECceecC
Confidence 999999999754
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.03 E-value=7.7e-10 Score=109.49 Aligned_cols=80 Identities=19% Similarity=0.277 Sum_probs=64.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh-hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC-
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~-~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~- 88 (452)
++|+|||||||+|++++++|++.| ++|++++|+. ...+...+.+. ...++.++.+|++|++++++++++
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~l~--~~~~~~~~~~Dl~d~~~~~~~~~~~ 72 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQG-------IDLIVFDNLSRKGATDNLHWLS--SLGNFEFVHGDIRNKNDVTRLITKY 72 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECCCSTTHHHHHHHHH--TTCCCEEEECCTTCHHHHHHHHHHH
T ss_pred cEEEEeCCCchhHHHHHHHHHhCC-------CEEEEEeCCCccCchhhhhhhc--cCCceEEEEcCCCCHHHHHHHHhcc
Confidence 479999999999999999999988 7999999853 22222223332 123688999999999999999988
Q ss_pred -ccEEeecCCCC
Q 012947 89 -TKLLLNCVGPY 99 (452)
Q Consensus 89 -~dvVIn~aGp~ 99 (452)
+|+||||||+.
T Consensus 73 ~~d~vih~A~~~ 84 (347)
T 1orr_A 73 MPDSCFHLAGQV 84 (347)
T ss_dssp CCSEEEECCCCC
T ss_pred CCCEEEECCccc
Confidence 99999999964
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.03 E-value=3.7e-10 Score=111.74 Aligned_cols=76 Identities=16% Similarity=0.211 Sum_probs=63.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHc-CCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCC-HHHHHHHHcC
Q 012947 11 FDVIILGASGFTGKYVVREALKL-FNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTD-PPSLHRLCSQ 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~-g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d-~~sl~~~~~~ 88 (452)
++|+|+|||||+|++++++|+++ + ++|++++|+.++++.+.+ ..++.++.+|++| .+.+++++++
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g-------~~V~~~~r~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~ 67 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDH-------YEVYGLDIGSDAISRFLN------HPHFHFVEGDISIHSEWIEYHVKK 67 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTT-------CEEEEEESCCGGGGGGTT------CTTEEEEECCTTTCSHHHHHHHHH
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCC-------CEEEEEeCCcchHHHhhc------CCCeEEEeccccCcHHHHHhhccC
Confidence 47999999999999999999998 6 799999999877643221 2467899999998 4678889999
Q ss_pred ccEEeecCCCC
Q 012947 89 TKLLLNCVGPY 99 (452)
Q Consensus 89 ~dvVIn~aGp~ 99 (452)
+|+||||||..
T Consensus 68 ~d~vih~A~~~ 78 (345)
T 2bll_A 68 CDVVLPLVAIA 78 (345)
T ss_dssp CSEEEECBCCC
T ss_pred CCEEEEccccc
Confidence 99999999864
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.02 E-value=7.5e-10 Score=107.95 Aligned_cols=81 Identities=21% Similarity=0.232 Sum_probs=72.3
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
+...++||||+|+||++++++|+++| ++|++++|+.++++++.+++. .++.++.+|++|+++++++++
T Consensus 15 ~gk~vlVTGas~gIG~~~a~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dl~d~~~v~~~~~~ 83 (291)
T 3rd5_A 15 AQRTVVITGANSGLGAVTARELARRG-------ATVIMAVRDTRKGEAAARTMA----GQVEVRELDLQDLSSVRRFADG 83 (291)
T ss_dssp TTCEEEEECCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHTTSS----SEEEEEECCTTCHHHHHHHHHT
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHhc----CCeeEEEcCCCCHHHHHHHHHh
Confidence 34689999999999999999999998 899999999999988887663 478899999999999999998
Q ss_pred --CccEEeecCCCCC
Q 012947 88 --QTKLLLNCVGPYR 100 (452)
Q Consensus 88 --~~dvVIn~aGp~~ 100 (452)
+.|+||||||...
T Consensus 84 ~~~iD~lv~nAg~~~ 98 (291)
T 3rd5_A 84 VSGADVLINNAGIMA 98 (291)
T ss_dssp CCCEEEEEECCCCCS
T ss_pred cCCCCEEEECCcCCC
Confidence 5699999999753
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.02 E-value=1e-09 Score=107.52 Aligned_cols=94 Identities=15% Similarity=0.182 Sum_probs=73.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
++|+|+|||||+|++++++|++++ ++|.+++|+..+.+ . .++.++.+|++ ++++.++++++|
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~--~--------~~~~~~~~Dl~-~~~~~~~~~~~d 64 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKNDG-------NTPIILTRSIGNKA--I--------NDYEYRVSDYT-LEDLINQLNDVD 64 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCCC---------------CCEEEECCCC-HHHHHHHTTTCS
T ss_pred CEEEEECCCcHHHHHHHHHHHhCC-------CEEEEEeCCCCccc--C--------CceEEEEcccc-HHHHHHhhcCCC
Confidence 589999999999999999999998 79999999944432 1 15789999999 999999999999
Q ss_pred EEeecCCCCCCC------------CHHHHHHHHHhCCc-EEEecC
Q 012947 91 LLLNCVGPYRLH------------GDPVAAACVHSGCD-YLDISG 122 (452)
Q Consensus 91 vVIn~aGp~~~~------------~~~vv~ac~~~g~~-yvDlsg 122 (452)
+||||||+.... ..+++++|.+.++. +|.+|.
T Consensus 65 ~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS 109 (311)
T 3m2p_A 65 AVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYAST 109 (311)
T ss_dssp EEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred EEEEccccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 999999975432 14566666666653 555553
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=6e-10 Score=106.52 Aligned_cols=82 Identities=23% Similarity=0.270 Sum_probs=70.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHH-cCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALK-LFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~-~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++||||+|+||++++++|++ .| ++|++++|+.++++++.+++.. ...++.++.+|++|.++++++++
T Consensus 4 ~k~vlITGasggIG~~~a~~L~~~~g-------~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~~~~~~~~ 75 (276)
T 1wma_A 4 IHVALVTGGNKGIGLAIVRDLCRLFS-------GDVVLTARDVTRGQAAVQQLQA-EGLSPRFHQLDIDDLQSIRALRDF 75 (276)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHHSS-------SEEEEEESSHHHHHHHHHHHHH-TTCCCEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHhcC-------CeEEEEeCChHHHHHHHHHHHh-cCCeeEEEECCCCCHHHHHHHHHH
Confidence 46899999999999999999999 78 7999999999888877766631 12467899999999999999887
Q ss_pred ------CccEEeecCCCC
Q 012947 88 ------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (452)
++|+||||||..
T Consensus 76 ~~~~~g~id~li~~Ag~~ 93 (276)
T 1wma_A 76 LRKEYGGLDVLVNNAGIA 93 (276)
T ss_dssp HHHHHSSEEEEEECCCCC
T ss_pred HHHhcCCCCEEEECCccc
Confidence 789999999964
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=5.2e-10 Score=111.62 Aligned_cols=80 Identities=13% Similarity=0.115 Sum_probs=67.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~- 88 (452)
.++|+|+|||||+|++++++|+++| ++|++++|+.++.+.+.+.+. ...++.++.+|++|++++.+++++
T Consensus 9 ~~~vlVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~ 79 (357)
T 1rkx_A 9 GKRVFVTGHTGFKGGWLSLWLQTMG-------ATVKGYSLTAPTVPSLFETAR--VADGMQSEIGDIRDQNKLLESIREF 79 (357)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESSCSSSSCHHHHTT--TTTTSEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHhCC-------CeEEEEeCCCcccchhhHhhc--cCCceEEEEccccCHHHHHHHHHhc
Confidence 4689999999999999999999998 799999998776555544442 134788999999999999999986
Q ss_pred -ccEEeecCCC
Q 012947 89 -TKLLLNCVGP 98 (452)
Q Consensus 89 -~dvVIn~aGp 98 (452)
+|+||||||.
T Consensus 80 ~~d~vih~A~~ 90 (357)
T 1rkx_A 80 QPEIVFHMAAQ 90 (357)
T ss_dssp CCSEEEECCSC
T ss_pred CCCEEEECCCC
Confidence 8999999985
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=6.6e-10 Score=108.61 Aligned_cols=83 Identities=18% Similarity=0.173 Sum_probs=66.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHH-HHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRV-KQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl-~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++||||+|+||++++++|+++| ++|++++|+.++. +.+.+.+.. ...++.++.+|++|+++++++++
T Consensus 47 gk~vlVTGas~GIG~aia~~la~~G-------~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~ 118 (291)
T 3ijr_A 47 GKNVLITGGDSGIGRAVSIAFAKEG-------ANIAIAYLDEEGDANETKQYVEK-EGVKCVLLPGDLSDEQHCKDIVQE 118 (291)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESSCHHHHHHHHHHHHT-TTCCEEEEESCTTSHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCchHHHHHHHHHHHh-cCCcEEEEECCCCCHHHHHHHHHH
Confidence 4579999999999999999999998 8999999987643 333333321 23577889999999999998887
Q ss_pred ------CccEEeecCCCCC
Q 012947 88 ------QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (452)
+.|+||||||...
T Consensus 119 ~~~~~g~iD~lvnnAg~~~ 137 (291)
T 3ijr_A 119 TVRQLGSLNILVNNVAQQY 137 (291)
T ss_dssp HHHHHSSCCEEEECCCCCC
T ss_pred HHHHcCCCCEEEECCCCcC
Confidence 6899999998643
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.02 E-value=1.6e-10 Score=111.25 Aligned_cols=74 Identities=22% Similarity=0.222 Sum_probs=64.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||+++++.|+++| ++|++++|+.++.+ ..++.++.+|++|+++++++++
T Consensus 28 ~k~vlVTGas~gIG~aia~~l~~~G-------~~V~~~~r~~~~~~----------~~~~~~~~~Dv~d~~~v~~~~~~~ 90 (260)
T 3un1_A 28 QKVVVITGASQGIGAGLVRAYRDRN-------YRVVATSRSIKPSA----------DPDIHTVAGDISKPETADRIVREG 90 (260)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHTT-------CEEEEEESSCCCCS----------STTEEEEESCTTSHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEeCChhhcc----------cCceEEEEccCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 89999999876531 2367889999999999999887
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
++|+||||||...
T Consensus 91 ~~~~g~iD~lv~nAg~~~ 108 (260)
T 3un1_A 91 IERFGRIDSLVNNAGVFL 108 (260)
T ss_dssp HHHHSCCCEEEECCCCCC
T ss_pred HHHCCCCCEEEECCCCCC
Confidence 7899999999653
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.01 E-value=4.1e-10 Score=108.08 Aligned_cols=82 Identities=15% Similarity=0.098 Sum_probs=69.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEE-ecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~ia-gR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++||||+|+||++++++|+++| ++|++. .|+.+++++..+++.. ...++.++.+|++|+++++++++
T Consensus 8 ~k~vlVTGas~GIG~aia~~la~~G-------~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~ 79 (259)
T 3edm_A 8 NRTIVVAGAGRDIGRACAIRFAQEG-------ANVVLTYNGAAEGAATAVAEIEK-LGRSALAIKADLTNAAEVEAAISA 79 (259)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECSSCHHHHHHHHHHHT-TTSCCEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEcCCCHHHHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHH
Confidence 4589999999999999999999998 789888 6677777777666632 23568899999999999998887
Q ss_pred ------CccEEeecCCCC
Q 012947 88 ------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (452)
+.|+||||||..
T Consensus 80 ~~~~~g~id~lv~nAg~~ 97 (259)
T 3edm_A 80 AADKFGEIHGLVHVAGGL 97 (259)
T ss_dssp HHHHHCSEEEEEECCCCC
T ss_pred HHHHhCCCCEEEECCCcc
Confidence 689999999854
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.01 E-value=6.5e-10 Score=106.35 Aligned_cols=76 Identities=14% Similarity=0.141 Sum_probs=64.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||++++++|+++| ++|++++|+.+++ .+++ ..++.++.+|++|+++++++++
T Consensus 9 ~k~vlVTGas~gIG~aia~~l~~~G-------~~V~~~~r~~~~~---~~~~----~~~~~~~~~D~~~~~~v~~~~~~~ 74 (257)
T 3tl3_A 9 DAVAVVTGGASGLGLATTKRLLDAG-------AQVVVLDIRGEDV---VADL----GDRARFAAADVTDEAAVASALDLA 74 (257)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHHT-------CEEEEEESSCHHH---HHHT----CTTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEeCchHHH---HHhc----CCceEEEECCCCCHHHHHHHHHHH
Confidence 4579999999999999999999999 8999999976544 3333 2468899999999999998887
Q ss_pred ----CccEEeecCCCC
Q 012947 88 ----QTKLLLNCVGPY 99 (452)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (452)
+.|+||||||..
T Consensus 75 ~~~g~id~lv~nAg~~ 90 (257)
T 3tl3_A 75 ETMGTLRIVVNCAGTG 90 (257)
T ss_dssp HHHSCEEEEEECGGGS
T ss_pred HHhCCCCEEEECCCCC
Confidence 889999999964
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=99.00 E-value=2.5e-10 Score=109.22 Aligned_cols=83 Identities=18% Similarity=0.204 Sum_probs=68.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHH---cCCCCCCCceEEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALK---LFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~---~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~-~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
...++||||+|+||+.+++.|++ +| ++|++.+|+.++++++.+++.. ....++.++.+|++|+++++++
T Consensus 6 ~k~~lVTGas~gIG~~ia~~l~~~~~~G-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~ 78 (259)
T 1oaa_A 6 CAVCVLTGASRGFGRALAPQLARLLSPG-------SVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRL 78 (259)
T ss_dssp SEEEEESSCSSHHHHHHHHHHHTTBCTT-------CEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHH
T ss_pred CcEEEEeCCCChHHHHHHHHHHHhhcCC-------CeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHH
Confidence 35799999999999999999999 67 8999999999998887776631 0124578889999999999887
Q ss_pred Hc---------Ccc--EEeecCCCC
Q 012947 86 CS---------QTK--LLLNCVGPY 99 (452)
Q Consensus 86 ~~---------~~d--vVIn~aGp~ 99 (452)
++ +.| +||||||..
T Consensus 79 ~~~~~~~~~~g~~d~~~lvnnAg~~ 103 (259)
T 1oaa_A 79 LSAVRELPRPEGLQRLLLINNAATL 103 (259)
T ss_dssp HHHHHHSCCCTTCCEEEEEECCCCC
T ss_pred HHHHHhccccccCCccEEEECCccc
Confidence 65 347 999999964
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.00 E-value=6.8e-10 Score=106.47 Aligned_cols=82 Identities=11% Similarity=0.030 Sum_probs=66.8
Q ss_pred CCCCCeEEEEcCC--chHHHHHHHHHHHcCCCCCCCceEEEEEecChhH---HHHHHHHhCCCCCCCccEEEEeCCCHHH
Q 012947 7 IPELFDVIILGAS--GFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR---VKQALQWASPSHSLSIPILTADTTDPPS 81 (452)
Q Consensus 7 ~~~~~~ilV~GAT--G~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~k---l~~l~~~l~~~~~~~v~~v~~Dl~d~~s 81 (452)
..+..+++||||+ |+||+.+++.|+++| ++|++++|+... ++++.++. .++.++.+|++|+++
T Consensus 11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~ 78 (271)
T 3ek2_A 11 FLDGKRILLTGLLSNRSIAYGIAKACKREG-------AELAFTYVGDRFKDRITEFAAEF-----GSELVFPCDVADDAQ 78 (271)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTT-------CEEEEEESSGGGHHHHHHHHHHT-----TCCCEEECCTTCHHH
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHHcC-------CCEEEEecchhhHHHHHHHHHHc-----CCcEEEECCCCCHHH
Confidence 3356789999999 999999999999998 899999998543 33333332 357899999999999
Q ss_pred HHHHHc-------CccEEeecCCCCC
Q 012947 82 LHRLCS-------QTKLLLNCVGPYR 100 (452)
Q Consensus 82 l~~~~~-------~~dvVIn~aGp~~ 100 (452)
++++++ +.|+||||||...
T Consensus 79 v~~~~~~~~~~~g~id~lv~nAg~~~ 104 (271)
T 3ek2_A 79 IDALFASLKTHWDSLDGLVHSIGFAP 104 (271)
T ss_dssp HHHHHHHHHHHCSCEEEEEECCCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCccCc
Confidence 999887 5699999999653
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=6.3e-10 Score=109.89 Aligned_cols=80 Identities=16% Similarity=0.138 Sum_probs=65.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHH-HHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC-
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVK-QALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~-~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~- 88 (452)
++|+|||||||+|++++++|+++| ++|++++|+.++.+ ...+.+. ...++.++.+|++|++++.+++++
T Consensus 4 ~~vlVtGatG~iG~~l~~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~ 74 (345)
T 2z1m_A 4 KRALITGIRGQDGAYLAKLLLEKG-------YEVYGADRRSGEFASWRLKELG--IENDVKIIHMDLLEFSNIIRTIEKV 74 (345)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEECSCCSTTTTHHHHHTT--CTTTEEECCCCTTCHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCC-------CEEEEEECCCcccccccHhhcc--ccCceeEEECCCCCHHHHHHHHHhc
Confidence 589999999999999999999998 89999999876542 1223332 123678889999999999999985
Q ss_pred -ccEEeecCCCC
Q 012947 89 -TKLLLNCVGPY 99 (452)
Q Consensus 89 -~dvVIn~aGp~ 99 (452)
+|+||||||..
T Consensus 75 ~~d~vih~A~~~ 86 (345)
T 2z1m_A 75 QPDEVYNLAAQS 86 (345)
T ss_dssp CCSEEEECCCCC
T ss_pred CCCEEEECCCCc
Confidence 59999999965
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=2.1e-09 Score=102.47 Aligned_cols=80 Identities=24% Similarity=0.240 Sum_probs=64.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceE-EEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCH-HHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKS-LALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDP-PSLHRL 85 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~-v~iagR~~--~kl~~l~~~l~~~~~~~v~~v~~Dl~d~-~sl~~~ 85 (452)
..+++|+||+|+||++++++|+++| ++ |++++|+. +.++++.+... ..++.++.+|++|+ ++++++
T Consensus 5 ~k~vlVtGas~gIG~~~a~~l~~~G-------~~~v~~~~r~~~~~~~~~l~~~~~---~~~~~~~~~D~~~~~~~~~~~ 74 (254)
T 1sby_A 5 NKNVIFVAALGGIGLDTSRELVKRN-------LKNFVILDRVENPTALAELKAINP---KVNITFHTYDVTVPVAESKKL 74 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTC-------CSEEEEEESSCCHHHHHHHHHHCT---TSEEEEEECCTTSCHHHHHHH
T ss_pred CcEEEEECCCChHHHHHHHHHHHCC-------CcEEEEEecCchHHHHHHHHHhCC---CceEEEEEEecCCChHHHHHH
Confidence 3579999999999999999999998 65 99999986 44555544331 24678899999998 888887
Q ss_pred Hc-------CccEEeecCCCC
Q 012947 86 CS-------QTKLLLNCVGPY 99 (452)
Q Consensus 86 ~~-------~~dvVIn~aGp~ 99 (452)
++ +.|+||||||..
T Consensus 75 ~~~~~~~~g~id~lv~~Ag~~ 95 (254)
T 1sby_A 75 LKKIFDQLKTVDILINGAGIL 95 (254)
T ss_dssp HHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHhcCCCCEEEECCccC
Confidence 76 789999999964
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.98 E-value=1.3e-09 Score=102.69 Aligned_cols=81 Identities=22% Similarity=0.241 Sum_probs=68.1
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..++|+||+|+||++++++|+++|. .++|++.+|+.++++++.+ +. ..++.++.+|++|+++++++++
T Consensus 4 k~vlItGasggiG~~la~~l~~~g~-----~~~V~~~~r~~~~~~~l~~-~~---~~~~~~~~~D~~~~~~~~~~~~~~~ 74 (250)
T 1yo6_A 4 GSVVVTGANRGIGLGLVQQLVKDKN-----IRHIIATARDVEKATELKS-IK---DSRVHVLPLTVTCDKSLDTFVSKVG 74 (250)
T ss_dssp SEEEESSCSSHHHHHHHHHHHTCTT-----CCEEEEEESSGGGCHHHHT-CC---CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEecCCchHHHHHHHHHHhcCC-----CcEEEEEecCHHHHHHHHh-cc---CCceEEEEeecCCHHHHHHHHHHHH
Confidence 4799999999999999999999872 1589999999988876643 21 3578899999999999998887
Q ss_pred ------CccEEeecCCCCC
Q 012947 88 ------QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (452)
++|+||||||...
T Consensus 75 ~~~g~~~id~li~~Ag~~~ 93 (250)
T 1yo6_A 75 EIVGSDGLSLLINNAGVLL 93 (250)
T ss_dssp HHHGGGCCCEEEECCCCCC
T ss_pred HhcCCCCCcEEEECCcccC
Confidence 8999999999654
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.98 E-value=8.7e-10 Score=105.63 Aligned_cols=80 Identities=16% Similarity=0.130 Sum_probs=67.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||++++++|+++| ++|++.+|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 5 ~k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~ 76 (260)
T 2qq5_A 5 GQVCVVTGASRGIGRGIALQLCKAG-------ATVYITGRHLDTLRVVAQEAQS-LGGQCVPVVCDSSQESEVRSLFEQV 76 (260)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHH-HSSEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHH-cCCceEEEECCCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 8999999999988877766521 12357788999999999887765
Q ss_pred ------CccEEeecCC
Q 012947 88 ------QTKLLLNCVG 97 (452)
Q Consensus 88 ------~~dvVIn~aG 97 (452)
+.|+||||||
T Consensus 77 ~~~~~g~id~lvnnAg 92 (260)
T 2qq5_A 77 DREQQGRLDVLVNNAY 92 (260)
T ss_dssp HHHHTTCCCEEEECCC
T ss_pred HHhcCCCceEEEECCc
Confidence 4599999995
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=2.1e-09 Score=106.65 Aligned_cols=78 Identities=18% Similarity=0.218 Sum_probs=63.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh----------hHHHHHHHHhCCCCCCCccEEEEeCCCHH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP----------TRVKQALQWASPSHSLSIPILTADTTDPP 80 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~----------~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~ 80 (452)
++|+|+|||||+|++++++|+++| ++|++++|+. +.++++.+.. ..++.++.+|++|++
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~~D~~~~~ 71 (348)
T 1ek6_A 3 EKVLVTGGAGYIGSHTVLELLEAG-------YLPVVIDNFHNAFRGGGSLPESLRRVQELT----GRSVEFEEMDILDQG 71 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTT-------CCEEEEECSSSSCBCSSSSBHHHHHHHHHH----TCCCEEEECCTTCHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEecCCcccccccccHHHHHHHHhcc----CCceEEEECCCCCHH
Confidence 579999999999999999999998 7899998853 2333333212 246789999999999
Q ss_pred HHHHHHc--CccEEeecCCCC
Q 012947 81 SLHRLCS--QTKLLLNCVGPY 99 (452)
Q Consensus 81 sl~~~~~--~~dvVIn~aGp~ 99 (452)
+++++++ ++|+||||||+.
T Consensus 72 ~~~~~~~~~~~d~vih~A~~~ 92 (348)
T 1ek6_A 72 ALQRLFKKYSFMAVIHFAGLK 92 (348)
T ss_dssp HHHHHHHHCCEEEEEECCSCC
T ss_pred HHHHHHHhcCCCEEEECCCCc
Confidence 9999998 899999999865
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=98.98 E-value=6e-11 Score=114.25 Aligned_cols=84 Identities=12% Similarity=0.136 Sum_probs=69.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC---hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN---PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~---~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
+...++||||+++||+.+++.|+++| ++|++.+|+ .++++++.+++.. ...++.++.+|++|+++++++
T Consensus 10 ~~k~vlVTGas~GIG~aia~~la~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~ 81 (262)
T 3ksu_A 10 KNKVIVIAGGIKNLGALTAKTFALES-------VNLVLHYHQAKDSDTANKLKDELED-QGAKVALYQSDLSNEEEVAKL 81 (262)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHTTSS-------CEEEEEESCGGGHHHHHHHHHHHHT-TTCEEEEEECCCCSHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEecCccCHHHHHHHHHHHHh-cCCcEEEEECCCCCHHHHHHH
Confidence 34679999999999999999999998 899998764 5567777776642 234678899999999999998
Q ss_pred Hc-------CccEEeecCCCCC
Q 012947 86 CS-------QTKLLLNCVGPYR 100 (452)
Q Consensus 86 ~~-------~~dvVIn~aGp~~ 100 (452)
++ +.|+||||||...
T Consensus 82 ~~~~~~~~g~iD~lvnnAg~~~ 103 (262)
T 3ksu_A 82 FDFAEKEFGKVDIAINTVGKVL 103 (262)
T ss_dssp HHHHHHHHCSEEEEEECCCCCC
T ss_pred HHHHHHHcCCCCEEEECCCCCC
Confidence 87 6899999999653
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=1.3e-09 Score=106.85 Aligned_cols=78 Identities=13% Similarity=0.043 Sum_probs=64.8
Q ss_pred CCeEEEEcCCc--hHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHH---HHHhCCCCCCCccEEEEeCCCHHHHHH
Q 012947 10 LFDVIILGASG--FTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQA---LQWASPSHSLSIPILTADTTDPPSLHR 84 (452)
Q Consensus 10 ~~~ilV~GATG--~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l---~~~l~~~~~~~v~~v~~Dl~d~~sl~~ 84 (452)
...++||||+| +||+.+++.|+++| ++|++.+|+.+..+.+ .++. ..+.++.+|++|++++++
T Consensus 30 ~k~vlVTGasg~~GIG~~ia~~la~~G-------~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~ 97 (296)
T 3k31_A 30 GKKGVIIGVANDKSLAWGIAKAVCAQG-------AEVALTYLSETFKKRVDPLAESL-----GVKLTVPCDVSDAESVDN 97 (296)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTT-------CEEEEEESSGGGHHHHHHHHHHH-----TCCEEEECCTTCHHHHHH
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHCC-------CEEEEEeCChHHHHHHHHHHHhc-----CCeEEEEcCCCCHHHHHH
Confidence 46799999997 99999999999998 8999999997654433 3333 346789999999999998
Q ss_pred HHc-------CccEEeecCCCC
Q 012947 85 LCS-------QTKLLLNCVGPY 99 (452)
Q Consensus 85 ~~~-------~~dvVIn~aGp~ 99 (452)
+++ +.|+||||||..
T Consensus 98 ~~~~~~~~~g~iD~lVnnAG~~ 119 (296)
T 3k31_A 98 MFKVLAEEWGSLDFVVHAVAFS 119 (296)
T ss_dssp HHHHHHHHHSCCSEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCcC
Confidence 887 579999999965
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=2.6e-09 Score=108.09 Aligned_cols=80 Identities=14% Similarity=0.103 Sum_probs=63.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHH--------------------HHHHHHhCCCCCCC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRV--------------------KQALQWASPSHSLS 68 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl--------------------~~l~~~l~~~~~~~ 68 (452)
...+|+|||||||||++++++|+++| ++|++++|+.... +.+.+.. ..+
T Consensus 10 ~~~~vlVTG~tGfIG~~l~~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~----~~~ 78 (404)
T 1i24_A 10 HGSRVMVIGGDGYCGWATALHLSKKN-------YEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT----GKS 78 (404)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHH----CCC
T ss_pred CCCeEEEeCCCcHHHHHHHHHHHhCC-------CeEEEEEecCccccccccccccccccchhhhhhhhHhhcc----CCc
Confidence 35689999999999999999999998 7999999875431 1111111 246
Q ss_pred ccEEEEeCCCHHHHHHHHcC--ccEEeecCCCC
Q 012947 69 IPILTADTTDPPSLHRLCSQ--TKLLLNCVGPY 99 (452)
Q Consensus 69 v~~v~~Dl~d~~sl~~~~~~--~dvVIn~aGp~ 99 (452)
+.++.+|++|++++.+++++ +|+||||||..
T Consensus 79 v~~~~~Dl~d~~~~~~~~~~~~~D~Vih~A~~~ 111 (404)
T 1i24_A 79 IELYVGDICDFEFLAESFKSFEPDSVVHFGEQR 111 (404)
T ss_dssp CEEEESCTTSHHHHHHHHHHHCCSEEEECCSCC
T ss_pred eEEEECCCCCHHHHHHHHhccCCCEEEECCCCC
Confidence 78999999999999999987 99999999864
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=98.96 E-value=7e-11 Score=113.48 Aligned_cols=84 Identities=13% Similarity=0.097 Sum_probs=65.7
Q ss_pred CCeEEEEcCC--chHHHHHHHHHHHcCCCCCCCceEEEEEecChhHH-HHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 012947 10 LFDVIILGAS--GFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRV-KQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 10 ~~~ilV~GAT--G~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl-~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
...++||||+ +++|++++++|+++| ++|++.+|+.++. ++..+++......++.++.+|++|++++++++
T Consensus 20 ~k~vlITGas~~~giG~~~a~~l~~~G-------~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~ 92 (267)
T 3gdg_A 20 GKVVVVTGASGPKGMGIEAARGCAEMG-------AAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLV 92 (267)
T ss_dssp TCEEEETTCCSSSSHHHHHHHHHHHTS-------CEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHH
T ss_pred CCEEEEECCCCCCChHHHHHHHHHHCC-------CeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHH
Confidence 4579999999 899999999999998 8999999875443 33333331101357788899999999999888
Q ss_pred c-------CccEEeecCCCCC
Q 012947 87 S-------QTKLLLNCVGPYR 100 (452)
Q Consensus 87 ~-------~~dvVIn~aGp~~ 100 (452)
+ +.|+||||||...
T Consensus 93 ~~~~~~~g~id~li~nAg~~~ 113 (267)
T 3gdg_A 93 KDVVADFGQIDAFIANAGATA 113 (267)
T ss_dssp HHHHHHTSCCSEEEECCCCCC
T ss_pred HHHHHHcCCCCEEEECCCcCC
Confidence 7 5699999999654
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=98.96 E-value=1.3e-09 Score=107.20 Aligned_cols=76 Identities=13% Similarity=0.180 Sum_probs=64.1
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--C
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--Q 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--~ 88 (452)
++|+|+|||||+|++++++|++++ ++|++++|+..+.. +.+ ..++.++.+|++|++++.++++ +
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~---~~~----~~~~~~~~~D~~~~~~~~~~~~~~~ 67 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEG-------LSVVVVDNLQTGHE---DAI----TEGAKFYNGDLRDKAFLRDVFTQEN 67 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECCSSCCG---GGS----CTTSEEEECCTTCHHHHHHHHHHSC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCC-------CEEEEEeCCCcCch---hhc----CCCcEEEECCCCCHHHHHHHHhhcC
Confidence 479999999999999999999998 79999999765432 222 1367899999999999999999 8
Q ss_pred ccEEeecCCCCC
Q 012947 89 TKLLLNCVGPYR 100 (452)
Q Consensus 89 ~dvVIn~aGp~~ 100 (452)
+|+|||+||+..
T Consensus 68 ~d~vih~a~~~~ 79 (330)
T 2c20_A 68 IEAVMHFAADSL 79 (330)
T ss_dssp EEEEEECCCCCC
T ss_pred CCEEEECCcccC
Confidence 999999998653
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=98.96 E-value=1.3e-09 Score=105.04 Aligned_cols=71 Identities=17% Similarity=0.108 Sum_probs=62.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||+.+++.|+++| ++|++.+|+.++ ..++.++.+|++|+++++++++
T Consensus 8 ~k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~------------~~~~~~~~~Dl~~~~~v~~~~~~~ 68 (264)
T 2dtx_A 8 DKVVIVTGASMGIGRAIAERFVDEG-------SKVIDLSIHDPG------------EAKYDHIECDVTNPDQVKASIDHI 68 (264)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTT-------CEEEEEESSCCC------------SCSSEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEecCccc------------CCceEEEEecCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 899999998765 1357889999999999998887
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
++|+||||||..
T Consensus 69 ~~~~g~iD~lv~~Ag~~ 85 (264)
T 2dtx_A 69 FKEYGSISVLVNNAGIE 85 (264)
T ss_dssp HHHHSCCCEEEECCCCC
T ss_pred HHHcCCCCEEEECCCCC
Confidence 689999999964
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=3.8e-09 Score=106.78 Aligned_cols=83 Identities=14% Similarity=0.213 Sum_probs=65.1
Q ss_pred CeEEEEcCCchHHHHHHHHHH-HcCCCCCCCceEEEEEecChhH---------HHHH---HHHhCCC-CCCC---ccEEE
Q 012947 11 FDVIILGASGFTGKYVVREAL-KLFNFPSSPIKSLALAGRNPTR---------VKQA---LQWASPS-HSLS---IPILT 73 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~-~~g~~~~~~~~~v~iagR~~~k---------l~~l---~~~l~~~-~~~~---v~~v~ 73 (452)
|+|+|||||||||++++++|+ +++ ++|++++|+..+ .+.+ ++++... ...+ +.++.
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRDTN-------HSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEV 75 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCC-------CEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHhCC-------CEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEE
Confidence 589999999999999999999 887 799999997543 3333 3333210 0124 78999
Q ss_pred EeCCCHHHHHHHHc--C-ccEEeecCCCCC
Q 012947 74 ADTTDPPSLHRLCS--Q-TKLLLNCVGPYR 100 (452)
Q Consensus 74 ~Dl~d~~sl~~~~~--~-~dvVIn~aGp~~ 100 (452)
+|++|++++.++++ + +|+||||||+..
T Consensus 76 ~Dl~d~~~~~~~~~~~~~~d~vih~A~~~~ 105 (397)
T 1gy8_A 76 GDVRNEDFLNGVFTRHGPIDAVVHMCAFLA 105 (397)
T ss_dssp SCTTCHHHHHHHHHHSCCCCEEEECCCCCC
T ss_pred CCCCCHHHHHHHHHhcCCCCEEEECCCccC
Confidence 99999999999998 6 999999999753
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.95 E-value=9e-10 Score=108.68 Aligned_cols=82 Identities=15% Similarity=0.075 Sum_probs=64.2
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHH-HHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVK-QALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~-~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
..++|+|||||||+|++++++|+++| ++|++++|+.++.. ...+.+. ...++.++.+|++|++++.++++
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~ 83 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLLEKG-------YRVHGLVARRSSDTRWRLRELG--IEGDIQYEDGDMADACSVQRAVI 83 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECCCSSCCCHHHHHTT--CGGGEEEEECCTTCHHHHHHHHH
T ss_pred cCCeEEEECCCChHHHHHHHHHHHCC-------CeEEEEeCCCccccccchhhcc--ccCceEEEECCCCCHHHHHHHHH
Confidence 45789999999999999999999998 79999999865421 1122221 12357889999999999999998
Q ss_pred C--ccEEeecCCCC
Q 012947 88 Q--TKLLLNCVGPY 99 (452)
Q Consensus 88 ~--~dvVIn~aGp~ 99 (452)
+ +|+||||||..
T Consensus 84 ~~~~d~Vih~A~~~ 97 (335)
T 1rpn_A 84 KAQPQEVYNLAAQS 97 (335)
T ss_dssp HHCCSEEEECCSCC
T ss_pred HcCCCEEEECcccc
Confidence 5 69999999964
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=98.95 E-value=2.7e-10 Score=109.16 Aligned_cols=71 Identities=15% Similarity=0.181 Sum_probs=61.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~- 88 (452)
...++|+||+|+||+.++++|+++| ++|++.+|+.++++ .+.++.+|++|++++++++++
T Consensus 21 ~k~vlVTGas~gIG~aia~~l~~~G-------~~V~~~~r~~~~~~------------~~~~~~~Dl~d~~~v~~~~~~~ 81 (253)
T 2nm0_A 21 SRSVLVTGGNRGIGLAIARAFADAG-------DKVAITYRSGEPPE------------GFLAVKCDITDTEQVEQAYKEI 81 (253)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESSSCCCT------------TSEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEeCChHhhc------------cceEEEecCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 89999999876532 367889999999999888764
Q ss_pred ------ccEEeecCCCC
Q 012947 89 ------TKLLLNCVGPY 99 (452)
Q Consensus 89 ------~dvVIn~aGp~ 99 (452)
.|+||||||..
T Consensus 82 ~~~~g~iD~lv~nAg~~ 98 (253)
T 2nm0_A 82 EETHGPVEVLIANAGVT 98 (253)
T ss_dssp HHHTCSCSEEEEECSCC
T ss_pred HHHcCCCCEEEECCCCC
Confidence 69999999964
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.95 E-value=1.8e-09 Score=105.66 Aligned_cols=83 Identities=12% Similarity=0.054 Sum_probs=66.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~--~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
...++||||+|+||+++++.|+++| ++|++.+|+. ++++++.+.+.. ...++.++.+|++|+++++++++
T Consensus 49 ~k~vlVTGas~GIG~aia~~la~~G-------~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~ 120 (294)
T 3r3s_A 49 DRKALVTGGDSGIGRAAAIAYAREG-------ADVAINYLPAEEEDAQQVKALIEE-CGRKAVLLPGDLSDESFARSLVH 120 (294)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEECCGGGHHHHHHHHHHHHH-TTCCEEECCCCTTSHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCcchhHHHHHHHHHHH-cCCcEEEEEecCCCHHHHHHHHH
Confidence 4579999999999999999999999 8999999873 344444443321 13567888999999999988876
Q ss_pred -------CccEEeecCCCCC
Q 012947 88 -------QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -------~~dvVIn~aGp~~ 100 (452)
+.|+||||||...
T Consensus 121 ~~~~~~g~iD~lv~nAg~~~ 140 (294)
T 3r3s_A 121 KAREALGGLDILALVAGKQT 140 (294)
T ss_dssp HHHHHHTCCCEEEECCCCCC
T ss_pred HHHHHcCCCCEEEECCCCcC
Confidence 6899999999643
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.94 E-value=9.5e-10 Score=105.31 Aligned_cols=85 Identities=21% Similarity=0.196 Sum_probs=66.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||++++++|+++|.. .++|++.+|+.++++.+. ++.. ...++.++.+|++|+++++++++
T Consensus 21 ~k~vlITGasggIG~~la~~L~~~G~~----~~~V~~~~r~~~~~~~~~-~l~~-~~~~~~~~~~Dl~~~~~v~~~~~~~ 94 (267)
T 1sny_A 21 MNSILITGCNRGLGLGLVKALLNLPQP----PQHLFTTCRNREQAKELE-DLAK-NHSNIHILEIDLRNFDAYDKLVADI 94 (267)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSC----CSEEEEEESCTTSCHHHH-HHHH-HCTTEEEEECCTTCGGGHHHHHHHH
T ss_pred CCEEEEECCCCcHHHHHHHHHHhcCCC----CcEEEEEecChhhhHHHH-Hhhc-cCCceEEEEecCCChHHHHHHHHHH
Confidence 357999999999999999999998721 158999999987654432 2210 12468899999999999998887
Q ss_pred -------CccEEeecCCCCC
Q 012947 88 -------QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -------~~dvVIn~aGp~~ 100 (452)
++|+||||||...
T Consensus 95 ~~~~g~~~id~li~~Ag~~~ 114 (267)
T 1sny_A 95 EGVTKDQGLNVLFNNAGIAP 114 (267)
T ss_dssp HHHHGGGCCSEEEECCCCCC
T ss_pred HHhcCCCCccEEEECCCcCC
Confidence 7999999999654
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=98.94 E-value=9.3e-10 Score=107.35 Aligned_cols=73 Identities=15% Similarity=0.177 Sum_probs=62.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHHc--CCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 11 FDVIILGASGFTGKYVVREALKL--FNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~--g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
++|+|+|||||+|++++++|+++ + ++|++.+|+..+.+ +. .++.++.+|++|++++.++++
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~~~g-------~~V~~~~r~~~~~~-~~--------~~~~~~~~D~~d~~~~~~~~~~ 66 (312)
T 2yy7_A 3 PKILIIGACGQIGTELTQKLRKLYGT-------ENVIASDIRKLNTD-VV--------NSGPFEVVNALDFNQIEHLVEV 66 (312)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHHHCG-------GGEEEEESCCCSCH-HH--------HSSCEEECCTTCHHHHHHHHHH
T ss_pred ceEEEECCccHHHHHHHHHHHHhCCC-------CEEEEEcCCCcccc-cc--------CCCceEEecCCCHHHHHHHHhh
Confidence 57999999999999999999998 6 78999999876532 21 146789999999999999998
Q ss_pred -CccEEeecCCCC
Q 012947 88 -QTKLLLNCVGPY 99 (452)
Q Consensus 88 -~~dvVIn~aGp~ 99 (452)
++|+||||||..
T Consensus 67 ~~~d~vih~a~~~ 79 (312)
T 2yy7_A 67 HKITDIYLMAALL 79 (312)
T ss_dssp TTCCEEEECCCCC
T ss_pred cCCCEEEECCccC
Confidence 899999999864
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.94 E-value=5.9e-10 Score=106.29 Aligned_cols=73 Identities=16% Similarity=0.169 Sum_probs=62.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||++++++|+++| ++|++.+|+.+. + ...+..+.+|++|+++++++++
T Consensus 7 ~k~vlVTGas~giG~~ia~~l~~~G-------~~V~~~~r~~~~-----~------~~~~~~~~~D~~d~~~~~~~~~~~ 68 (250)
T 2fwm_X 7 GKNVWVTGAGKGIGYATALAFVEAG-------AKVTGFDQAFTQ-----E------QYPFATEVMDVADAAQVAQVCQRL 68 (250)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEESCCCS-----S------CCSSEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCchhh-----h------cCCceEEEcCCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 899999998752 1 1137788999999999999887
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
++|+||||||...
T Consensus 69 ~~~~g~id~lv~~Ag~~~ 86 (250)
T 2fwm_X 69 LAETERLDALVNAAGILR 86 (250)
T ss_dssp HHHCSCCCEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCcCC
Confidence 7899999999643
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=98.94 E-value=2.7e-09 Score=102.79 Aligned_cols=80 Identities=16% Similarity=0.203 Sum_probs=68.3
Q ss_pred CCeEEEEcC--CchHHHHHHHHHHHcCCCCCCCceEEEEEecChhH-HHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 012947 10 LFDVIILGA--SGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR-VKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 10 ~~~ilV~GA--TG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~k-l~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
...++|||| +|+||+.++++|+++| ++|++.+|+.++ ++++.++++ .++.++.+|++|++++++++
T Consensus 7 ~k~vlVTGa~~s~gIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~ 75 (269)
T 2h7i_A 7 GKRILVSGIITDSSIAFHIARVAQEQG-------AQLVLTGFDRLRLIQRITDRLP----AKAPLLELDVQNEEHLASLA 75 (269)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHHTT-------CEEEEEECSCHHHHHHHHTTSS----SCCCEEECCTTCHHHHHHHH
T ss_pred CCEEEEECCCCCCchHHHHHHHHHHCC-------CEEEEEecChHHHHHHHHHhcC----CCceEEEccCCCHHHHHHHH
Confidence 357999999 9999999999999998 899999999876 466665542 46789999999999999888
Q ss_pred c----------CccEEeecCCCCC
Q 012947 87 S----------QTKLLLNCVGPYR 100 (452)
Q Consensus 87 ~----------~~dvVIn~aGp~~ 100 (452)
+ +.|+||||||...
T Consensus 76 ~~~~~~~g~~~~iD~lv~nAg~~~ 99 (269)
T 2h7i_A 76 GRVTEAIGAGNKLDGVVHSIGFMP 99 (269)
T ss_dssp HHHHHHHCTTCCEEEEEECCCCCC
T ss_pred HHHHHHhCCCCCceEEEECCccCc
Confidence 7 7899999999653
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.94 E-value=2.8e-09 Score=103.52 Aligned_cols=78 Identities=13% Similarity=0.089 Sum_probs=64.4
Q ss_pred CCeEEEEcCC--chHHHHHHHHHHHcCCCCCCCceEEEEEecChh---HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH
Q 012947 10 LFDVIILGAS--GFTGKYVVREALKLFNFPSSPIKSLALAGRNPT---RVKQALQWASPSHSLSIPILTADTTDPPSLHR 84 (452)
Q Consensus 10 ~~~ilV~GAT--G~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~---kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~ 84 (452)
...++||||+ |+||+++++.|+++| ++|++++|+.+ .++++.++. ..+.++.+|++|++++++
T Consensus 21 ~k~vlVTGas~~~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~l~~~~-----~~~~~~~~Dl~~~~~v~~ 88 (285)
T 2p91_A 21 GKRALITGVANERSIAYGIAKSFHREG-------AQLAFTYATPKLEKRVREIAKGF-----GSDLVVKCDVSLDEDIKN 88 (285)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHHTT-------CEEEEEESSGGGHHHHHHHHHHT-----TCCCEEECCTTCHHHHHH
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHHHhc-----CCeEEEEcCCCCHHHHHH
Confidence 3579999999 999999999999998 89999999875 333333332 246889999999999998
Q ss_pred HHc-------CccEEeecCCCC
Q 012947 85 LCS-------QTKLLLNCVGPY 99 (452)
Q Consensus 85 ~~~-------~~dvVIn~aGp~ 99 (452)
+++ +.|+||||||..
T Consensus 89 ~~~~~~~~~g~iD~lv~~Ag~~ 110 (285)
T 2p91_A 89 LKKFLEENWGSLDIIVHSIAYA 110 (285)
T ss_dssp HHHHHHHHTSCCCEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCC
Confidence 887 679999999964
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=98.94 E-value=8.3e-10 Score=105.84 Aligned_cols=72 Identities=18% Similarity=0.202 Sum_probs=62.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
.+|+|+||||++|++++++|++++ ++|++++|+.++. + ..++.++.+|++|++++.++++++|
T Consensus 3 ~~ilVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~------~----~~~~~~~~~Dl~d~~~~~~~~~~~d 65 (267)
T 3ay3_A 3 NRLLVTGAAGGVGSAIRPHLGTLA-------HEVRLSDIVDLGA------A----EAHEEIVACDLADAQAVHDLVKDCD 65 (267)
T ss_dssp EEEEEESTTSHHHHHHGGGGGGTE-------EEEEECCSSCCCC------C----CTTEEECCCCTTCHHHHHHHHTTCS
T ss_pred ceEEEECCCCHHHHHHHHHHHhCC-------CEEEEEeCCCccc------c----CCCccEEEccCCCHHHHHHHHcCCC
Confidence 379999999999999999999987 8999999987542 1 1356788899999999999999999
Q ss_pred EEeecCCCC
Q 012947 91 LLLNCVGPY 99 (452)
Q Consensus 91 vVIn~aGp~ 99 (452)
+||||||+.
T Consensus 66 ~vi~~a~~~ 74 (267)
T 3ay3_A 66 GIIHLGGVS 74 (267)
T ss_dssp EEEECCSCC
T ss_pred EEEECCcCC
Confidence 999999975
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=98.93 E-value=7e-10 Score=106.49 Aligned_cols=84 Identities=12% Similarity=0.092 Sum_probs=65.9
Q ss_pred CCeEEEEcCCch--HHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 10 LFDVIILGASGF--TGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 10 ~~~ilV~GATG~--iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
...++||||+|+ ||+.+++.|+++| ++|++.+|+.+..+.+.+........++.++.+|++|+++++++++
T Consensus 7 ~k~vlVTGasg~~GIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 79 (266)
T 3oig_A 7 GRNIVVMGVANKRSIAWGIARSLHEAG-------ARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFA 79 (266)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTT-------CEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHH
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHCC-------CEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHH
Confidence 457999999987 9999999999998 8999999987544333322211012368899999999999998876
Q ss_pred -------CccEEeecCCCCC
Q 012947 88 -------QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -------~~dvVIn~aGp~~ 100 (452)
+.|+||||||...
T Consensus 80 ~~~~~~g~id~li~~Ag~~~ 99 (266)
T 3oig_A 80 SIKEQVGVIHGIAHCIAFAN 99 (266)
T ss_dssp HHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHhCCeeEEEEcccccc
Confidence 6799999999653
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=98.93 E-value=1.5e-09 Score=108.26 Aligned_cols=80 Identities=20% Similarity=0.282 Sum_probs=63.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHc-CCCCCCCceEEEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 11 FDVIILGASGFTGKYVVREALKL-FNFPSSPIKSLALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~-g~~~~~~~~~v~iagR~~--~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
|+|+|||||||||++++++|++. + ++|++.+|+. ++++.+ +++. ...++.++.+|++|++++.++++
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g-------~~V~~~~r~~~~~~~~~~-~~~~--~~~~~~~~~~Dl~d~~~~~~~~~ 70 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQ-------DTVVNIDKLTYAGNLESL-SDIS--ESNRYNFEHADICDSAEITRIFE 70 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCS-------CEEEEEECCCTTCCGGGG-TTTT--TCTTEEEEECCTTCHHHHHHHHH
T ss_pred CEEEEECCCchHhHHHHHHHHhcCC-------CeEEEEecCCCCCchhhh-hhhh--cCCCeEEEECCCCCHHHHHHHHh
Confidence 47999999999999999999998 5 7999999864 222222 2221 13467889999999999999998
Q ss_pred --CccEEeecCCCCC
Q 012947 88 --QTKLLLNCVGPYR 100 (452)
Q Consensus 88 --~~dvVIn~aGp~~ 100 (452)
++|+||||||...
T Consensus 71 ~~~~d~vih~A~~~~ 85 (361)
T 1kew_A 71 QYQPDAVMHLAAESH 85 (361)
T ss_dssp HHCCSEEEECCSCCC
T ss_pred hcCCCEEEECCCCcC
Confidence 8999999999653
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=98.93 E-value=2e-09 Score=103.30 Aligned_cols=78 Identities=13% Similarity=0.100 Sum_probs=64.7
Q ss_pred CCeEEEEcCC--chHHHHHHHHHHHcCCCCCCCceEEEEEecChh---HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH
Q 012947 10 LFDVIILGAS--GFTGKYVVREALKLFNFPSSPIKSLALAGRNPT---RVKQALQWASPSHSLSIPILTADTTDPPSLHR 84 (452)
Q Consensus 10 ~~~ilV~GAT--G~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~---kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~ 84 (452)
...++||||+ |+||+++++.|+++| ++|++++|+.+ .++++.++. ..+.++.+|++|++++++
T Consensus 8 ~k~vlVTGas~~~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~l~~~~-----~~~~~~~~D~~~~~~v~~ 75 (261)
T 2wyu_A 8 GKKALVMGVTNQRSLGFAIAAKLKEAG-------AEVALSYQAERLRPEAEKLAEAL-----GGALLFRADVTQDEELDA 75 (261)
T ss_dssp TCEEEEESCCSSSSHHHHHHHHHHHHT-------CEEEEEESCGGGHHHHHHHHHHT-----TCCEEEECCTTCHHHHHH
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCC-------CEEEEEcCCHHHHHHHHHHHHhc-----CCcEEEECCCCCHHHHHH
Confidence 3579999999 999999999999998 89999999875 344443332 236789999999999998
Q ss_pred HHc-------CccEEeecCCCC
Q 012947 85 LCS-------QTKLLLNCVGPY 99 (452)
Q Consensus 85 ~~~-------~~dvVIn~aGp~ 99 (452)
+++ +.|+||||||..
T Consensus 76 ~~~~~~~~~g~iD~lv~~Ag~~ 97 (261)
T 2wyu_A 76 LFAGVKEAFGGLDYLVHAIAFA 97 (261)
T ss_dssp HHHHHHHHHSSEEEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCC
Confidence 887 679999999964
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=98.93 E-value=2.2e-09 Score=103.73 Aligned_cols=79 Identities=15% Similarity=0.102 Sum_probs=65.2
Q ss_pred CCeEEEEcCC--chHHHHHHHHHHHcCCCCCCCceEEEEEecChh---HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH
Q 012947 10 LFDVIILGAS--GFTGKYVVREALKLFNFPSSPIKSLALAGRNPT---RVKQALQWASPSHSLSIPILTADTTDPPSLHR 84 (452)
Q Consensus 10 ~~~ilV~GAT--G~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~---kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~ 84 (452)
...++||||+ |+||++++++|+++| ++|++++|+.+ .++++.++. ..+.++.+|++|++++++
T Consensus 6 ~k~vlVTGas~~~gIG~~~a~~l~~~G-------~~V~~~~r~~~~~~~~~~l~~~~-----~~~~~~~~D~~~~~~v~~ 73 (275)
T 2pd4_A 6 GKKGLIVGVANNKSIAYGIAQSCFNQG-------ATLAFTYLNESLEKRVRPIAQEL-----NSPYVYELDVSKEEHFKS 73 (275)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHTTT-------CEEEEEESSTTTHHHHHHHHHHT-----TCCCEEECCTTCHHHHHH
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHhc-----CCcEEEEcCCCCHHHHHH
Confidence 3579999999 999999999999998 89999999876 344444332 247889999999999998
Q ss_pred HHc-------CccEEeecCCCCC
Q 012947 85 LCS-------QTKLLLNCVGPYR 100 (452)
Q Consensus 85 ~~~-------~~dvVIn~aGp~~ 100 (452)
+++ +.|+||||||...
T Consensus 74 ~~~~~~~~~g~id~lv~nAg~~~ 96 (275)
T 2pd4_A 74 LYNSVKKDLGSLDFIVHSVAFAP 96 (275)
T ss_dssp HHHHHHHHTSCEEEEEECCCCCC
T ss_pred HHHHHHHHcCCCCEEEECCccCc
Confidence 887 6799999999653
|
| >2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=98.93 E-value=1.8e-09 Score=111.58 Aligned_cols=137 Identities=12% Similarity=0.132 Sum_probs=92.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeC--CCH-HHHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADT--TDP-PSLHRLC 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl--~d~-~sl~~~~ 86 (452)
+.+|+|+|+ |.+|+.+++.|+++..-. ..+|.+++.+..+. ++.+.+ .+.+...++ +|. +.+.+++
T Consensus 13 ~~rVlIIGa-GgVG~~va~lla~~~dv~---~~~I~vaD~~~~~~-~~~~~~------g~~~~~~~Vdadnv~~~l~aLl 81 (480)
T 2ph5_A 13 KNRFVILGF-GCVGQALMPLIFEKFDIK---PSQVTIIAAEGTKV-DVAQQY------GVSFKLQQITPQNYLEVIGSTL 81 (480)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHHBCCC---GGGEEEEESSCCSC-CHHHHH------TCEEEECCCCTTTHHHHTGGGC
T ss_pred CCCEEEECc-CHHHHHHHHHHHhCCCCc---eeEEEEeccchhhh-hHHhhc------CCceeEEeccchhHHHHHHHHh
Confidence 467999995 899999999999986310 02688888876542 334433 235555555 444 3356677
Q ss_pred cCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHH--HH------------HHHHHHHHHHHh-CccEEEcCCCC
Q 012947 87 SQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEF--ME------------RMEARYHEKAVE-TGSLLVSACGF 151 (452)
Q Consensus 87 ~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~--~~------------~~~~~~~~~A~~-~gv~iv~~~G~ 151 (452)
++.|+|||++ ++. ....++++|+++|+||||++.|+.. .. .....+++.+++ .| ..|.+||+
T Consensus 82 ~~~DvVIN~s-~~~-~~l~Im~acleaGv~YlDTa~E~~~p~~~~~~~~p~~~~~Y~~~~~~~~~~~~~~G-tAilg~G~ 158 (480)
T 2ph5_A 82 EENDFLIDVS-IGI-SSLALIILCNQKGALYINAATEPWKEEFVMEKMALNRRTNYSLREEVLRLKDKTQK-TALITHGA 158 (480)
T ss_dssp CTTCEEEECC-SSS-CHHHHHHHHHHHTCEEEESSCCCCCC----------CCCHHHHHHHHHTTTTTCCS-CEECSCBT
T ss_pred cCCCEEEECC-ccc-cCHHHHHHHHHcCCCEEECCCCcccccccccccCcchhhhHHHHHHHHHHHHhcCC-cEEecCCC
Confidence 7779999966 333 3479999999999999999975311 10 122344555534 67 88899999
Q ss_pred CcchhhHHH
Q 012947 152 DSIPAELGV 160 (452)
Q Consensus 152 ~s~P~dl~~ 160 (452)
++.-....+
T Consensus 159 nPGvvsvf~ 167 (480)
T 2ph5_A 159 NPGLVSHFI 167 (480)
T ss_dssp TTBHHHHHH
T ss_pred CccHHHHHH
Confidence 866544444
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=98.92 E-value=7.1e-10 Score=108.33 Aligned_cols=73 Identities=12% Similarity=0.199 Sum_probs=61.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
++|+|||||||+|++++++|+++| ++|.+.+|+.++..+.. ..++.++.+|+.|.+ +.+++++ |
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~-------~~~~~~~~~Dl~d~~-~~~~~~~-d 64 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELG-------YEVVVVDNLSSGRREFV-------NPSAELHVRDLKDYS-WGAGIKG-D 64 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEECCCSSCCGGGS-------CTTSEEECCCTTSTT-TTTTCCC-S
T ss_pred CEEEEECCCChHHHHHHHHHHhCC-------CEEEEEeCCCCCchhhc-------CCCceEEECccccHH-HHhhcCC-C
Confidence 479999999999999999999998 89999999876543221 246789999999988 8888888 9
Q ss_pred EEeecCCCC
Q 012947 91 LLLNCVGPY 99 (452)
Q Consensus 91 vVIn~aGp~ 99 (452)
+||||||..
T Consensus 65 ~vih~A~~~ 73 (312)
T 3ko8_A 65 VVFHFAANP 73 (312)
T ss_dssp EEEECCSSC
T ss_pred EEEECCCCC
Confidence 999999853
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=98.92 E-value=7.6e-10 Score=104.69 Aligned_cols=72 Identities=18% Similarity=0.182 Sum_probs=60.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..++||||+|+||+.++++|+++| ++|++.+|+.+++ .+++ .+..+.+|++| ++++++++
T Consensus 3 k~vlVTGas~giG~~~a~~l~~~G-------~~V~~~~r~~~~~---~~~~------~~~~~~~D~~~-~~~~~~~~~~~ 65 (239)
T 2ekp_A 3 RKALVTGGSRGIGRAIAEALVARG-------YRVAIASRNPEEA---AQSL------GAVPLPTDLEK-DDPKGLVKRAL 65 (239)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESSCHHH---HHHH------TCEEEECCTTT-SCHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHH---HHhh------CcEEEecCCch-HHHHHHHHHHH
Confidence 479999999999999999999998 8999999998773 3333 25788999999 77776654
Q ss_pred ----CccEEeecCCCC
Q 012947 88 ----QTKLLLNCVGPY 99 (452)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (452)
+.|+||||||..
T Consensus 66 ~~~g~id~lv~~Ag~~ 81 (239)
T 2ekp_A 66 EALGGLHVLVHAAAVN 81 (239)
T ss_dssp HHHTSCCEEEECCCCC
T ss_pred HHcCCCCEEEECCCCC
Confidence 789999999964
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=98.92 E-value=2.2e-09 Score=103.11 Aligned_cols=79 Identities=14% Similarity=0.090 Sum_probs=64.3
Q ss_pred CCeEEEEcCC--chHHHHHHHHHHHcCCCCCCCceEEEEEecCh---hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH
Q 012947 10 LFDVIILGAS--GFTGKYVVREALKLFNFPSSPIKSLALAGRNP---TRVKQALQWASPSHSLSIPILTADTTDPPSLHR 84 (452)
Q Consensus 10 ~~~ilV~GAT--G~iG~~va~~L~~~g~~~~~~~~~v~iagR~~---~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~ 84 (452)
...++||||+ |+||++++++|+++| ++|++.+|+. +.++++.++. ....++.+|++|++++++
T Consensus 9 ~k~vlVTGas~~~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~l~~~~-----~~~~~~~~D~~~~~~v~~ 76 (265)
T 1qsg_A 9 GKRILVTGVASKLSIAYGIAQAMHREG-------AELAFTYQNDKLKGRVEEFAAQL-----GSDIVLQCDVAEDASIDT 76 (265)
T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHHTT-------CEEEEEESSTTTHHHHHHHHHHT-----TCCCEEECCTTCHHHHHH
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHCC-------CEEEEEcCcHHHHHHHHHHHHhc-----CCcEEEEccCCCHHHHHH
Confidence 3579999999 999999999999998 8999999987 3344443332 234788999999999998
Q ss_pred HHc-------CccEEeecCCCCC
Q 012947 85 LCS-------QTKLLLNCVGPYR 100 (452)
Q Consensus 85 ~~~-------~~dvVIn~aGp~~ 100 (452)
+++ +.|+||||||...
T Consensus 77 ~~~~~~~~~g~iD~lv~~Ag~~~ 99 (265)
T 1qsg_A 77 MFAELGKVWPKFDGFVHSIGFAP 99 (265)
T ss_dssp HHHHHHTTCSSEEEEEECCCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCCC
Confidence 887 6799999999653
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=98.92 E-value=4.7e-09 Score=103.76 Aligned_cols=78 Identities=10% Similarity=0.161 Sum_probs=61.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh----hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP----TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~----~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
++|+|||||||||++++++|+++| ++|++.+|.. +.++.+.+.. ..++.++.+|++|++++.+++
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G-------~~V~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~ 69 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNG-------HDVIILDNLCNSKRSVLPVIERLG----GKHPTFVEGDIRNEALMTEIL 69 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECCSSCCTTHHHHHHHHH----TSCCEEEECCTTCHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEecCCCcchhHHHHHHhhc----CCcceEEEccCCCHHHHHHHh
Confidence 479999999999999999999998 7898888642 2233322211 235788999999999999998
Q ss_pred c--CccEEeecCCCC
Q 012947 87 S--QTKLLLNCVGPY 99 (452)
Q Consensus 87 ~--~~dvVIn~aGp~ 99 (452)
+ ++|+||||||..
T Consensus 70 ~~~~~D~vih~A~~~ 84 (338)
T 1udb_A 70 HDHAIDTVIHFAGLK 84 (338)
T ss_dssp HHTTCSEEEECCSCC
T ss_pred hccCCCEEEECCccC
Confidence 7 499999999864
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=98.91 E-value=2.5e-10 Score=108.56 Aligned_cols=83 Identities=16% Similarity=0.103 Sum_probs=68.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEE-ecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~ia-gR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
+...++||||+|+||++++++|+++| ++|++. +|+.++++++.+++.. ...++..+.+|++|.++++++++
T Consensus 6 ~~k~vlITGas~gIG~~~a~~l~~~G-------~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~ 77 (255)
T 3icc_A 6 KGKVALVTGASRGIGRAIAKRLANDG-------ALVAIHYGNRKEEAEETVYEIQS-NGGSAFSIGANLESLHGVEALYS 77 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTT-------CEEEEEESSCSHHHHHHHHHHHH-TTCEEEEEECCTTSHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCC-------CeEEEEeCCchHHHHHHHHHHHh-cCCceEEEecCcCCHHHHHHHHH
Confidence 44689999999999999999999998 788774 7888888777766632 23467788999999999888775
Q ss_pred C-------------ccEEeecCCCC
Q 012947 88 Q-------------TKLLLNCVGPY 99 (452)
Q Consensus 88 ~-------------~dvVIn~aGp~ 99 (452)
. .|+||||||..
T Consensus 78 ~~~~~~~~~~~~~~id~lv~nAg~~ 102 (255)
T 3icc_A 78 SLDNELQNRTGSTKFDILINNAGIG 102 (255)
T ss_dssp HHHHHHHHHHSSSCEEEEEECCCCC
T ss_pred HHHHHhcccccCCcccEEEECCCCC
Confidence 3 89999999964
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=98.91 E-value=1.5e-09 Score=106.30 Aligned_cols=80 Identities=21% Similarity=0.296 Sum_probs=61.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec-ChhH---HHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTR---VKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR-~~~k---l~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
.+|+|||||||||++++++|+++| ++|++..| +.++ .+.+ .++.. ...++.++.+|++|++++++++
T Consensus 2 k~vlVTGatG~iG~~l~~~L~~~G-------~~V~~~~r~~~~~~~~~~~~-~~~~~-~~~~~~~~~~Dl~d~~~~~~~~ 72 (322)
T 2p4h_X 2 GRVCVTGGTGFLGSWIIKSLLENG-------YSVNTTIRADPERKRDVSFL-TNLPG-ASEKLHFFNADLSNPDSFAAAI 72 (322)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-------CEEEEECCCC----CCCHHH-HTSTT-HHHHEEECCCCTTCGGGGHHHH
T ss_pred CEEEEECChhHHHHHHHHHHHHCC-------CEEEEEEeCCccchhHHHHH-Hhhhc-cCCceEEEecCCCCHHHHHHHH
Confidence 479999999999999999999998 79999898 6533 2222 11110 0013567889999999999999
Q ss_pred cCccEEeecCCCC
Q 012947 87 SQTKLLLNCVGPY 99 (452)
Q Consensus 87 ~~~dvVIn~aGp~ 99 (452)
+++|+|||+|++.
T Consensus 73 ~~~d~vih~A~~~ 85 (322)
T 2p4h_X 73 EGCVGIFHTASPI 85 (322)
T ss_dssp TTCSEEEECCCCC
T ss_pred cCCCEEEEcCCcc
Confidence 9999999999864
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=98.91 E-value=5.6e-09 Score=109.11 Aligned_cols=111 Identities=20% Similarity=0.309 Sum_probs=77.3
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHH---HHHHHhCC-----------CCCCCccEEE
Q 012947 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVK---QALQWASP-----------SHSLSIPILT 73 (452)
Q Consensus 8 ~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~---~l~~~l~~-----------~~~~~v~~v~ 73 (452)
.+.++|+|||||||||++++++|++.++. ..+|++.+|+.++.+ ++.+.+.. ....++.++.
T Consensus 71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~----g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~ 146 (478)
T 4dqv_A 71 PELRTVLLTGATGFLGRYLVLELLRRLDV----DGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVA 146 (478)
T ss_dssp SCCCEEEEECTTSHHHHHHHHHHHHHSCT----TCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhcCCC----CCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEE
Confidence 34678999999999999999999998210 079999999866432 22222210 0024789999
Q ss_pred EeCC------CHHHHHHHHcCccEEeecCCCCCCCC------------HHHHHHHHHhCC-cEEEecC
Q 012947 74 ADTT------DPPSLHRLCSQTKLLLNCVGPYRLHG------------DPVAAACVHSGC-DYLDISG 122 (452)
Q Consensus 74 ~Dl~------d~~sl~~~~~~~dvVIn~aGp~~~~~------------~~vv~ac~~~g~-~yvDlsg 122 (452)
+|++ |.+++.++++++|+||||||...... .+++++|.+.++ ++|.+|.
T Consensus 147 ~Dl~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS 214 (478)
T 4dqv_A 147 GDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVST 214 (478)
T ss_dssp CCTTSGGGGCCHHHHHHHHHHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEE
T ss_pred eECCCcccCCCHHHHHHHHcCCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEee
Confidence 9998 77789999999999999999753211 345555555554 4444443
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=98.91 E-value=6.9e-10 Score=105.70 Aligned_cols=71 Identities=17% Similarity=0.175 Sum_probs=60.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|+||+.++++|+++| ++|++.+|+.++++ .+..+.+|++|+++++++++
T Consensus 15 ~k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~------------~~~~~~~D~~~~~~~~~~~~~~ 75 (247)
T 1uzm_A 15 SRSVLVTGGNRGIGLAIAQRLAADG-------HKVAVTHRGSGAPK------------GLFGVEVDVTDSDAVDRAFTAV 75 (247)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTT-------CEEEEEESSSCCCT------------TSEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEeCChHHHH------------HhcCeeccCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 89999999876542 12247899999999988876
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
+.|+||||||..
T Consensus 76 ~~~~g~id~lv~~Ag~~ 92 (247)
T 1uzm_A 76 EEHQGPVEVLVSNAGLS 92 (247)
T ss_dssp HHHHSSCSEEEEECSCC
T ss_pred HHHcCCCCEEEECCCCC
Confidence 579999999964
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.91 E-value=2.4e-09 Score=105.59 Aligned_cols=81 Identities=11% Similarity=0.124 Sum_probs=64.1
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh--HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT--RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~--kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
++|+|||||||+|++++++|++++. .++|++.+|+.. +.+.+ +++. ...++.++.+|++|++++++++.+
T Consensus 4 m~vlVTGatG~iG~~l~~~L~~~g~-----~~~V~~~~r~~~~~~~~~~-~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~ 75 (336)
T 2hun_A 4 MKLLVTGGMGFIGSNFIRYILEKHP-----DWEVINIDKLGYGSNPANL-KDLE--DDPRYTFVKGDVADYELVKELVRK 75 (336)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCT-----TCEEEEEECCCTTCCGGGG-TTTT--TCTTEEEEECCTTCHHHHHHHHHT
T ss_pred CeEEEECCCchHHHHHHHHHHHhCC-----CCEEEEEecCcccCchhHH-hhhc--cCCceEEEEcCCCCHHHHHHHhhC
Confidence 6899999999999999999999862 168999998642 22221 2221 124678899999999999999999
Q ss_pred ccEEeecCCCC
Q 012947 89 TKLLLNCVGPY 99 (452)
Q Consensus 89 ~dvVIn~aGp~ 99 (452)
+|+||||||..
T Consensus 76 ~d~vih~A~~~ 86 (336)
T 2hun_A 76 VDGVVHLAAES 86 (336)
T ss_dssp CSEEEECCCCC
T ss_pred CCEEEECCCCc
Confidence 99999999965
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=3e-09 Score=105.11 Aligned_cols=85 Identities=14% Similarity=0.194 Sum_probs=62.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHc-CCCCCCCceEEEEEecChh--HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 11 FDVIILGASGFTGKYVVREALKL-FNFPSSPIKSLALAGRNPT--RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~-g~~~~~~~~~v~iagR~~~--kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
|+|+|||||||+|++++++|+++ ++.. ..++|++.+|+.. ..+.+ +.+. ...++.++.+|++|++++.+++.
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~--~~~~V~~~~r~~~~~~~~~~-~~~~--~~~~~~~~~~Dl~d~~~~~~~~~ 75 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDV--PADEVIVLDSLTYAGNRANL-APVD--ADPRLRFVHGDIRDAGLLARELR 75 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTS--CCSEEEEEECCCTTCCGGGG-GGGT--TCTTEEEEECCTTCHHHHHHHTT
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCC--CceEEEEEECCCccCchhhh-hhcc--cCCCeEEEEcCCCCHHHHHHHhc
Confidence 47999999999999999999995 3100 0058999998642 11111 1221 12467889999999999999999
Q ss_pred CccEEeecCCCCC
Q 012947 88 QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ~~dvVIn~aGp~~ 100 (452)
++|+||||||...
T Consensus 76 ~~d~Vih~A~~~~ 88 (337)
T 1r6d_A 76 GVDAIVHFAAESH 88 (337)
T ss_dssp TCCEEEECCSCCC
T ss_pred CCCEEEECCCccC
Confidence 9999999998653
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=98.90 E-value=2.2e-09 Score=105.26 Aligned_cols=75 Identities=17% Similarity=0.317 Sum_probs=62.9
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 8 ~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
..+++|+|||||||+|++++++|+++| ++|++++|+.++ +. + ++.++.+|++|++++.++++
T Consensus 10 ~~~~~vlVTGatG~iG~~l~~~L~~~G-------~~V~~~~r~~~~-~~----l------~~~~~~~Dl~d~~~~~~~~~ 71 (321)
T 2pk3_A 10 HGSMRALITGVAGFVGKYLANHLTEQN-------VEVFGTSRNNEA-KL----P------NVEMISLDIMDSQRVKKVIS 71 (321)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCTTC-CC----T------TEEEEECCTTCHHHHHHHHH
T ss_pred cCcceEEEECCCChHHHHHHHHHHHCC-------CEEEEEecCCcc-cc----c------eeeEEECCCCCHHHHHHHHH
Confidence 346789999999999999999999998 799999998764 21 1 46788999999999999998
Q ss_pred C--ccEEeecCCCCC
Q 012947 88 Q--TKLLLNCVGPYR 100 (452)
Q Consensus 88 ~--~dvVIn~aGp~~ 100 (452)
+ +|+||||||+..
T Consensus 72 ~~~~d~vih~A~~~~ 86 (321)
T 2pk3_A 72 DIKPDYIFHLAAKSS 86 (321)
T ss_dssp HHCCSEEEECCSCCC
T ss_pred hcCCCEEEEcCcccc
Confidence 6 999999999653
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.90 E-value=3.7e-09 Score=105.79 Aligned_cols=82 Identities=16% Similarity=0.139 Sum_probs=59.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHH-----HHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRV-----KQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl-----~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
++|+|||||||+|++++++|+++| ++|++++|+.++. +.+.+.... ...++.++.+|++|++++.++
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~ 73 (372)
T 1db3_A 2 KVALITGVTGQDGSYLAEFLLEKG-------YEVHGIKRRASSFNTERVDHIYQDPHT-CNPKFHLHYGDLSDTSNLTRI 73 (372)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEECC----------------------CCEEECCCCSSCHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCC-------CEEEEEECCCcccchHHHHHHhhcccc-CCCceEEEECCCCCHHHHHHH
Confidence 479999999999999999999998 7999999986542 222111100 024678889999999999999
Q ss_pred HcC--ccEEeecCCCCC
Q 012947 86 CSQ--TKLLLNCVGPYR 100 (452)
Q Consensus 86 ~~~--~dvVIn~aGp~~ 100 (452)
+++ +|+||||||+..
T Consensus 74 ~~~~~~d~vih~A~~~~ 90 (372)
T 1db3_A 74 LREVQPDEVYNLGAMSH 90 (372)
T ss_dssp HHHHCCSEEEECCCCCT
T ss_pred HHhcCCCEEEECCcccC
Confidence 985 699999999643
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=98.90 E-value=2.5e-09 Score=109.82 Aligned_cols=84 Identities=13% Similarity=0.131 Sum_probs=62.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh---HHHHHHHHhCC--------CCCCCccEEEEeCC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT---RVKQALQWASP--------SHSLSIPILTADTT 77 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~---kl~~l~~~l~~--------~~~~~v~~v~~Dl~ 77 (452)
..++|+|||||||||++++++|++.+ ++|++++|+.+ .++.+.+.+.. ....++.++.+|++
T Consensus 68 ~~~~vlVTGatG~iG~~l~~~L~~~g-------~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~ 140 (427)
T 4f6c_A 68 PLGNTLLTGATGFLGAYLIEALQGYS-------HRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFE 140 (427)
T ss_dssp CCEEEEEECTTSHHHHHHHHHHTTTE-------EEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC-
T ss_pred CCCEEEEecCCcHHHHHHHHHHHcCC-------CEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCC
Confidence 34689999999999999999998776 89999999877 33333222110 01247899999999
Q ss_pred CHHHHHHHHcCccEEeecCCCCC
Q 012947 78 DPPSLHRLCSQTKLLLNCVGPYR 100 (452)
Q Consensus 78 d~~sl~~~~~~~dvVIn~aGp~~ 100 (452)
|++++. .+.++|+||||||+..
T Consensus 141 d~~~l~-~~~~~d~Vih~A~~~~ 162 (427)
T 4f6c_A 141 CMDDVV-LPENMDTIIHAGARTD 162 (427)
T ss_dssp --CCCC-CSSCCSEEEECCCCC-
T ss_pred CcccCC-CcCCCCEEEECCcccC
Confidence 988888 7789999999999753
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=98.89 E-value=6e-10 Score=107.53 Aligned_cols=101 Identities=15% Similarity=0.087 Sum_probs=72.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||+++++.|+++| ++|++++|+.++++ ....+.+|++|.++++++++
T Consensus 28 gk~vlVTGas~gIG~aia~~la~~G-------~~V~~~~r~~~~~~------------~~~~~~~Dv~~~~~~~~~~~~~ 88 (266)
T 3uxy_A 28 GKVALVTGAAGGIGGAVVTALRAAG-------ARVAVADRAVAGIA------------ADLHLPGDLREAAYADGLPGAV 88 (266)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTT-------CEEEECSSCCTTSC------------CSEECCCCTTSHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHH------------hhhccCcCCCCHHHHHHHHHHH
Confidence 4579999999999999999999998 89999999876542 12344789999999888775
Q ss_pred -----CccEEeecCCCCCC-----CCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHH
Q 012947 88 -----QTKLLLNCVGPYRL-----HGDPVAAACVHSGCDYLDISGEPEFMERMEARY 134 (452)
Q Consensus 88 -----~~dvVIn~aGp~~~-----~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~ 134 (452)
+.|+||||||.... ....-.+...+ +++.|....++..++.+
T Consensus 89 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~-----vN~~g~~~l~~~~~~~m 140 (266)
T 3uxy_A 89 AAGLGRLDIVVNNAGVISRGRITETTDADWSLSLG-----VNVEAPFRICRAAIPLM 140 (266)
T ss_dssp HHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHH-----HHTHHHHHHHHHHHHHH
T ss_pred HHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHH-----HHhHHHHHHHHHHHHHH
Confidence 68999999996542 12223333332 34445555556554443
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=98.89 E-value=4.3e-10 Score=111.90 Aligned_cols=82 Identities=16% Similarity=0.008 Sum_probs=62.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh---HHHHHHHHhC--CCCCCCccEEEEeCCCHHHHHHH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT---RVKQALQWAS--PSHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~---kl~~l~~~l~--~~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
..++||||+|+||++++++|+++| ++|++++|+.+ ++.+..+.+. .....++.++.+|++|+++++++
T Consensus 3 k~vlVTGas~GIG~ala~~L~~~G-------~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~ 75 (327)
T 1jtv_A 3 TVVLITGCSSGIGLHLAVRLASDP-------SQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAA 75 (327)
T ss_dssp EEEEESCCSSHHHHHHHHHHHTCT-------TCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-------CceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHH
Confidence 469999999999999999999998 66777766543 3333333221 00124678899999999999999
Q ss_pred HcC-----ccEEeecCCCC
Q 012947 86 CSQ-----TKLLLNCVGPY 99 (452)
Q Consensus 86 ~~~-----~dvVIn~aGp~ 99 (452)
+++ .|+||||||..
T Consensus 76 ~~~~~~g~iD~lVnnAG~~ 94 (327)
T 1jtv_A 76 RERVTEGRVDVLVCNAGLG 94 (327)
T ss_dssp HHTCTTSCCSEEEECCCCC
T ss_pred HHHHhcCCCCEEEECCCcC
Confidence 985 89999999864
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=98.89 E-value=8e-10 Score=111.37 Aligned_cols=82 Identities=18% Similarity=0.118 Sum_probs=62.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhH-----HHHHHHHhCCCCCC-CccEEEEeCCCHHHHHH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR-----VKQALQWASPSHSL-SIPILTADTTDPPSLHR 84 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~k-----l~~l~~~l~~~~~~-~v~~v~~Dl~d~~sl~~ 84 (452)
.+|+|||||||||++++++|++.| ++|++++|+.++ ++.+.+.+.. ... ++.++.+|++|++++.+
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~ 100 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKG-------YEVHGLIRRSSNFNTQRINHIYIDPHN-VNKALMKLHYADLTDASSLRR 100 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECCCSSCCCTTTTTTC---------CCEEEEECCTTCHHHHHH
T ss_pred CeEEEEcCCchHHHHHHHHHHHCC-------CEEEEEecCCccccchhhhhhhhcccc-ccccceEEEECCCCCHHHHHH
Confidence 379999999999999999999998 799999998654 2222111100 012 67889999999999999
Q ss_pred HHcC--ccEEeecCCCCC
Q 012947 85 LCSQ--TKLLLNCVGPYR 100 (452)
Q Consensus 85 ~~~~--~dvVIn~aGp~~ 100 (452)
++++ +|+||||||+..
T Consensus 101 ~~~~~~~d~Vih~A~~~~ 118 (381)
T 1n7h_A 101 WIDVIKPDEVYNLAAQSH 118 (381)
T ss_dssp HHHHHCCSEEEECCSCCC
T ss_pred HHHhcCCCEEEECCcccC
Confidence 9985 699999999653
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=98.88 E-value=2.3e-09 Score=104.96 Aligned_cols=68 Identities=19% Similarity=0.322 Sum_probs=43.1
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~-- 88 (452)
++|+|+|||||+|++++++|+++| ++|++.+|+.++ . + ++.+|++|++++.+++++
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~--------~-----~--~~~~Dl~d~~~~~~~~~~~~ 60 (315)
T 2ydy_A 3 RRVLVTGATGLLGRAVHKEFQQNN-------WHAVGCGFRRAR--------P-----K--FEQVNLLDSNAVHHIIHDFQ 60 (315)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT-------CEEEEEC---------------------------------CHHHHHHHC
T ss_pred CeEEEECCCcHHHHHHHHHHHhCC-------CeEEEEccCCCC--------C-----C--eEEecCCCHHHHHHHHHhhC
Confidence 579999999999999999999988 799999987643 0 1 667899999999999885
Q ss_pred ccEEeecCCCCC
Q 012947 89 TKLLLNCVGPYR 100 (452)
Q Consensus 89 ~dvVIn~aGp~~ 100 (452)
+|+||||||...
T Consensus 61 ~d~vih~A~~~~ 72 (315)
T 2ydy_A 61 PHVIVHCAAERR 72 (315)
T ss_dssp CSEEEECC----
T ss_pred CCEEEECCcccC
Confidence 899999998643
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=98.88 E-value=1.1e-09 Score=103.75 Aligned_cols=73 Identities=14% Similarity=0.101 Sum_probs=61.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
+...++|+||+|+||++++++|+++| ++|++.+|+.++++ ....++.+|++|+++++++++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~-----------~~~~~~~~D~~~~~~v~~~~~~ 67 (241)
T 1dhr_A 6 EARRVLVYGGRGALGSRCVQAFRARN-------WWVASIDVVENEEA-----------SASVIVKMTDSFTEQADQVTAE 67 (241)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTT-------CEEEEEESSCCTTS-----------SEEEECCCCSCHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCC-------CEEEEEeCChhhcc-----------CCcEEEEcCCCCHHHHHHHHHH
Confidence 34579999999999999999999998 89999999876542 124567899999999988876
Q ss_pred --------CccEEeecCCCC
Q 012947 88 --------QTKLLLNCVGPY 99 (452)
Q Consensus 88 --------~~dvVIn~aGp~ 99 (452)
+.|+||||||..
T Consensus 68 ~~~~~~~g~iD~lv~~Ag~~ 87 (241)
T 1dhr_A 68 VGKLLGDQKVDAILCVAGGW 87 (241)
T ss_dssp HHHHHTTCCEEEEEECCCCC
T ss_pred HHHHhCCCCCCEEEEccccc
Confidence 689999999964
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.87 E-value=2.1e-09 Score=107.98 Aligned_cols=83 Identities=14% Similarity=0.142 Sum_probs=62.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhH-----HHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR-----VKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~k-----l~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
++|+|||||||+|++++++|+++| ++|++++|+.++ ++.+.+........++.++.+|++|++++.++
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 97 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKG-------YEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKI 97 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHH
T ss_pred cEEEEECCCchHHHHHHHHHHHCC-------CEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHH
Confidence 479999999999999999999998 799999998643 22221110000023678899999999999999
Q ss_pred HcC--ccEEeecCCCCC
Q 012947 86 CSQ--TKLLLNCVGPYR 100 (452)
Q Consensus 86 ~~~--~dvVIn~aGp~~ 100 (452)
+++ +|+||||||+..
T Consensus 98 ~~~~~~d~vih~A~~~~ 114 (375)
T 1t2a_A 98 INEVKPTEIYNLGAQSH 114 (375)
T ss_dssp HHHHCCSEEEECCSCCC
T ss_pred HHhcCCCEEEECCCccc
Confidence 985 699999999643
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=98.87 E-value=5.6e-09 Score=100.72 Aligned_cols=71 Identities=17% Similarity=0.161 Sum_probs=61.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
++|+|+|| ||+|++++++|++++ ++|.+++|+.++.+.+.. .++.++.+|++|.+ ++++|
T Consensus 6 ~~ilVtGa-G~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~-------~~~~~~~~D~~d~~-----~~~~d 65 (286)
T 3ius_A 6 GTLLSFGH-GYTARVLSRALAPQG-------WRIIGTSRNPDQMEAIRA-------SGAEPLLWPGEEPS-----LDGVT 65 (286)
T ss_dssp CEEEEETC-CHHHHHHHHHHGGGT-------CEEEEEESCGGGHHHHHH-------TTEEEEESSSSCCC-----CTTCC
T ss_pred CcEEEECC-cHHHHHHHHHHHHCC-------CEEEEEEcChhhhhhHhh-------CCCeEEEecccccc-----cCCCC
Confidence 68999998 999999999999998 899999999988766543 36889999999844 78999
Q ss_pred EEeecCCCCCC
Q 012947 91 LLLNCVGPYRL 101 (452)
Q Consensus 91 vVIn~aGp~~~ 101 (452)
+|||+|++...
T Consensus 66 ~vi~~a~~~~~ 76 (286)
T 3ius_A 66 HLLISTAPDSG 76 (286)
T ss_dssp EEEECCCCBTT
T ss_pred EEEECCCcccc
Confidence 99999997643
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=2.2e-09 Score=105.00 Aligned_cols=75 Identities=17% Similarity=0.275 Sum_probs=61.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--C
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--Q 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--~ 88 (452)
|+|+|||||||+|++++++|+++| ++|++.+|+..... +.+ ..++.++.+|++|+++++++++ +
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G-------~~V~~~~r~~~~~~---~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~ 66 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARG-------LEVAVLDNLATGKR---ENV----PKGVPFFRVDLRDKEGVERAFREFR 66 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT-------CEEEEECCCSSCCG---GGS----CTTCCEECCCTTCHHHHHHHHHHHC
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCC-------CEEEEEECCCcCch---hhc----ccCeEEEECCCCCHHHHHHHHHhcC
Confidence 479999999999999999999988 79999998543211 111 1357788999999999999998 8
Q ss_pred ccEEeecCCCC
Q 012947 89 TKLLLNCVGPY 99 (452)
Q Consensus 89 ~dvVIn~aGp~ 99 (452)
+|+|||+||..
T Consensus 67 ~d~vi~~a~~~ 77 (311)
T 2p5y_A 67 PTHVSHQAAQA 77 (311)
T ss_dssp CSEEEECCSCC
T ss_pred CCEEEECcccc
Confidence 99999999864
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.87 E-value=2.9e-09 Score=103.08 Aligned_cols=62 Identities=15% Similarity=0.300 Sum_probs=55.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
.+.+|+|||||||+|++++++|+++| ++|++.+|+ .+|++|++++.++++
T Consensus 11 ~~~~vlVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~----------------------~~Dl~d~~~~~~~~~~ 61 (292)
T 1vl0_A 11 HHMKILITGANGQLGREIQKQLKGKN-------VEVIPTDVQ----------------------DLDITNVLAVNKFFNE 61 (292)
T ss_dssp -CEEEEEESTTSHHHHHHHHHHTTSS-------EEEEEECTT----------------------TCCTTCHHHHHHHHHH
T ss_pred ccceEEEECCCChHHHHHHHHHHhCC-------CeEEeccCc----------------------cCCCCCHHHHHHHHHh
Confidence 46799999999999999999999988 899999985 158999999999998
Q ss_pred -CccEEeecCCCC
Q 012947 88 -QTKLLLNCVGPY 99 (452)
Q Consensus 88 -~~dvVIn~aGp~ 99 (452)
++|+||||||..
T Consensus 62 ~~~d~vih~A~~~ 74 (292)
T 1vl0_A 62 KKPNVVINCAAHT 74 (292)
T ss_dssp HCCSEEEECCCCC
T ss_pred cCCCEEEECCccC
Confidence 799999999864
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=98.86 E-value=1.4e-09 Score=109.60 Aligned_cols=79 Identities=16% Similarity=0.204 Sum_probs=65.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
.++|+|+|||||+|++++++|++++. ++|.+++|+..+..+ .+. ...++.++.+|++|++++.++++++
T Consensus 32 ~~~ilVtGatG~iG~~l~~~L~~~g~------~~V~~~~r~~~~~~~---~l~--~~~~v~~~~~Dl~d~~~l~~~~~~~ 100 (377)
T 2q1s_A 32 NTNVMVVGGAGFVGSNLVKRLLELGV------NQVHVVDNLLSAEKI---NVP--DHPAVRFSETSITDDALLASLQDEY 100 (377)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC------SEEEEECCCTTCCGG---GSC--CCTTEEEECSCTTCHHHHHHCCSCC
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCC------ceEEEEECCCCCchh---hcc--CCCceEEEECCCCCHHHHHHHhhCC
Confidence 46899999999999999999999872 689999998654321 111 1246788999999999999999999
Q ss_pred cEEeecCCCC
Q 012947 90 KLLLNCVGPY 99 (452)
Q Consensus 90 dvVIn~aGp~ 99 (452)
|+||||||+.
T Consensus 101 d~Vih~A~~~ 110 (377)
T 2q1s_A 101 DYVFHLATYH 110 (377)
T ss_dssp SEEEECCCCS
T ss_pred CEEEECCCcc
Confidence 9999999865
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=98.86 E-value=2.8e-09 Score=116.39 Aligned_cols=102 Identities=15% Similarity=0.151 Sum_probs=77.3
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhH----HHHHHHHhCCCCCCCccEEEEeCCCHHHHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR----VKQALQWASPSHSLSIPILTADTTDPPSLHR 84 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~k----l~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~ 84 (452)
..++|+|+|||||||++++++|++++ ++|++++|+..+ ++++. .+. ..++.++.+|++|++++++
T Consensus 10 ~~~~ilVTGatG~IG~~l~~~L~~~G-------~~V~~~~r~~~~~~~~~~~l~-~~~---~~~v~~v~~Dl~d~~~l~~ 78 (699)
T 1z45_A 10 TSKIVLVTGGAGYIGSHTVVELIENG-------YDCVVADNLSNSTYDSVARLE-VLT---KHHIPFYEVDLCDRKGLEK 78 (699)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECCSSCCTHHHHHHH-HHH---TSCCCEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCc-------CEEEEEECCCcchHHHHHHHh-hcc---CCceEEEEcCCCCHHHHHH
Confidence 34689999999999999999999998 799999987543 22221 111 2467899999999999999
Q ss_pred HHc--CccEEeecCCCCCCC----------------CHHHHHHHHHhCC-cEEEec
Q 012947 85 LCS--QTKLLLNCVGPYRLH----------------GDPVAAACVHSGC-DYLDIS 121 (452)
Q Consensus 85 ~~~--~~dvVIn~aGp~~~~----------------~~~vv~ac~~~g~-~yvDls 121 (452)
+++ ++|+||||||..... ...++++|.+.++ ++|.++
T Consensus 79 ~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~S 134 (699)
T 1z45_A 79 VFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSS 134 (699)
T ss_dssp HHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred HHHhCCCCEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEC
Confidence 998 899999999965311 1456778877775 566554
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=98.84 E-value=3.4e-09 Score=103.71 Aligned_cols=69 Identities=16% Similarity=0.208 Sum_probs=59.8
Q ss_pred eEEEEcCCchHHHHHHHHHHHc--CCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 12 DVIILGASGFTGKYVVREALKL--FNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~--g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
+|+|||||||+|++++++|+++ + ++|++.+|+..+. .++.++.+|++|++++.++++
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g-------~~V~~~~r~~~~~------------~~~~~~~~D~~d~~~~~~~~~~~ 61 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGK-------KNVIASDIVQRDT------------GGIKFITLDVSNRDEIDRAVEKY 61 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCG-------GGEEEEESSCCCC------------TTCCEEECCTTCHHHHHHHHHHT
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCC-------CEEEEecCCCccc------------cCceEEEecCCCHHHHHHHHhhc
Confidence 4899999999999999999998 5 7899999875432 145788999999999999998
Q ss_pred CccEEeecCCCC
Q 012947 88 QTKLLLNCVGPY 99 (452)
Q Consensus 88 ~~dvVIn~aGp~ 99 (452)
++|+|||+||..
T Consensus 62 ~~d~vih~a~~~ 73 (317)
T 3ajr_A 62 SIDAIFHLAGIL 73 (317)
T ss_dssp TCCEEEECCCCC
T ss_pred CCcEEEECCccc
Confidence 899999999864
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.83 E-value=3e-09 Score=101.42 Aligned_cols=72 Identities=19% Similarity=0.159 Sum_probs=56.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH--
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC-- 86 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~-- 86 (452)
+...++||||+|+||+++++.|+++| ++|++.+|+.+.+++ + ..+.++ +|+ .+++++++
T Consensus 18 ~~k~vlVTGas~gIG~~~a~~l~~~G-------~~V~~~~r~~~~~~~----~-----~~~~~~-~D~--~~~~~~~~~~ 78 (249)
T 1o5i_A 18 RDKGVLVLAASRGIGRAVADVLSQEG-------AEVTICARNEELLKR----S-----GHRYVV-CDL--RKDLDLLFEK 78 (249)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHH----T-----CSEEEE-CCT--TTCHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEcCCHHHHHh----h-----CCeEEE-eeH--HHHHHHHHHH
Confidence 35679999999999999999999998 899999999855432 2 245566 898 33444444
Q ss_pred -cCccEEeecCCCC
Q 012947 87 -SQTKLLLNCVGPY 99 (452)
Q Consensus 87 -~~~dvVIn~aGp~ 99 (452)
.++|+||||||..
T Consensus 79 ~~~iD~lv~~Ag~~ 92 (249)
T 1o5i_A 79 VKEVDILVLNAGGP 92 (249)
T ss_dssp SCCCSEEEECCCCC
T ss_pred hcCCCEEEECCCCC
Confidence 4889999999954
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.83 E-value=5.5e-10 Score=105.40 Aligned_cols=71 Identities=13% Similarity=0.054 Sum_probs=60.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..++|+||+|+||++++++|+++| ++|++.+|+.++++ ....++.+|++|+++++++++
T Consensus 4 k~vlITGas~gIG~~~a~~l~~~G-------~~V~~~~r~~~~~~-----------~~~~~~~~D~~~~~~~~~~~~~~~ 65 (236)
T 1ooe_A 4 GKVIVYGGKGALGSAILEFFKKNG-------YTVLNIDLSANDQA-----------DSNILVDGNKNWTEQEQSILEQTA 65 (236)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTT-------EEEEEEESSCCTTS-----------SEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEecCccccc-----------cccEEEeCCCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 89999999987642 124567789999999988776
Q ss_pred ------CccEEeecCCCC
Q 012947 88 ------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (452)
+.|+||||||..
T Consensus 66 ~~~~~g~id~lv~~Ag~~ 83 (236)
T 1ooe_A 66 SSLQGSQVDGVFCVAGGW 83 (236)
T ss_dssp HHHTTCCEEEEEECCCCC
T ss_pred HHhCCCCCCEEEECCccc
Confidence 789999999954
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=98.83 E-value=1.4e-09 Score=105.12 Aligned_cols=69 Identities=22% Similarity=0.327 Sum_probs=61.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC-c
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-T 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~-~ 89 (452)
++|+|+| +||+|++++++|+++| ++|.+.+|+.+++ ..++.++.+|++|++++.+++++ +
T Consensus 4 ~~ilVtG-aG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~~~~ 64 (286)
T 3gpi_A 4 SKILIAG-CGDLGLELARRLTAQG-------HEVTGLRRSAQPM-----------PAGVQTLIADVTRPDTLASIVHLRP 64 (286)
T ss_dssp CCEEEEC-CSHHHHHHHHHHHHTT-------CCEEEEECTTSCC-----------CTTCCEEECCTTCGGGCTTGGGGCC
T ss_pred CcEEEEC-CCHHHHHHHHHHHHCC-------CEEEEEeCCcccc-----------ccCCceEEccCCChHHHHHhhcCCC
Confidence 5799999 5999999999999998 7999999987653 24788999999999999999987 9
Q ss_pred cEEeecCCC
Q 012947 90 KLLLNCVGP 98 (452)
Q Consensus 90 dvVIn~aGp 98 (452)
|+|||+||+
T Consensus 65 d~vih~a~~ 73 (286)
T 3gpi_A 65 EILVYCVAA 73 (286)
T ss_dssp SEEEECHHH
T ss_pred CEEEEeCCC
Confidence 999999985
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.81 E-value=3.2e-09 Score=102.51 Aligned_cols=61 Identities=20% Similarity=0.274 Sum_probs=54.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--C
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--Q 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--~ 88 (452)
++|+|+|||||+|++++++|+++| ++|.+.+|. .+|+.|++++.++++ +
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~----------------------~~D~~d~~~~~~~~~~~~ 56 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPEE-------YDIYPFDKK----------------------LLDITNISQVQQVVQEIR 56 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTTT-------EEEEEECTT----------------------TSCTTCHHHHHHHHHHHC
T ss_pred eEEEEECCCCHHHHHHHHHHHhCC-------CEEEEeccc----------------------ccCCCCHHHHHHHHHhcC
Confidence 479999999999999999999988 899999991 158999999999998 6
Q ss_pred ccEEeecCCCCC
Q 012947 89 TKLLLNCVGPYR 100 (452)
Q Consensus 89 ~dvVIn~aGp~~ 100 (452)
+|+||||||...
T Consensus 57 ~d~vi~~a~~~~ 68 (287)
T 3sc6_A 57 PHIIIHCAAYTK 68 (287)
T ss_dssp CSEEEECCCCCC
T ss_pred CCEEEECCcccC
Confidence 999999998754
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=98.80 E-value=2.1e-09 Score=106.67 Aligned_cols=80 Identities=14% Similarity=0.108 Sum_probs=63.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEE---------ecChhHHHHHHHHhCCCCCCCccEEEEeCCCHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA---------GRNPTRVKQALQWASPSHSLSIPILTADTTDPP 80 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~ia---------gR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~ 80 (452)
...++||||+|+||+.+++.|+++| ++|++. +|+.++++++.+++.. ......+|++|.+
T Consensus 9 gk~~lVTGas~GIG~~~a~~La~~G-------a~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~----~~~~~~~D~~~~~ 77 (319)
T 1gz6_A 9 GRVVLVTGAGGGLGRAYALAFAERG-------ALVVVNDLGGDFKGVGKGSSAADKVVEEIRR----RGGKAVANYDSVE 77 (319)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTT-------CEEEEECCCBCTTSCBCCSHHHHHHHHHHHH----TTCEEEEECCCGG
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEcCCcccccccCCHHHHHHHHHHHHh----hCCeEEEeCCCHH
Confidence 4579999999999999999999998 799885 5678888877776631 1123468999998
Q ss_pred HHHHHHc-------CccEEeecCCCCC
Q 012947 81 SLHRLCS-------QTKLLLNCVGPYR 100 (452)
Q Consensus 81 sl~~~~~-------~~dvVIn~aGp~~ 100 (452)
+++++++ +.|+||||||...
T Consensus 78 ~~~~~~~~~~~~~g~iD~lVnnAG~~~ 104 (319)
T 1gz6_A 78 AGEKLVKTALDTFGRIDVVVNNAGILR 104 (319)
T ss_dssp GHHHHHHHHHHHTSCCCEEEECCCCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 8777654 6899999999653
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=98.80 E-value=2.1e-09 Score=101.91 Aligned_cols=77 Identities=16% Similarity=0.170 Sum_probs=58.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH---HH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHR---LC 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~---~~ 86 (452)
...++||||+|+||+++++.|++ + .+|++++|+.++++++.+ + .++..+.+|+.|.++.+. .+
T Consensus 5 ~k~vlITGas~gIG~~~a~~l~~-g-------~~v~~~~r~~~~~~~~~~-~-----~~~~~~~~D~~~~~~~~~~~~~~ 70 (245)
T 3e9n_A 5 KKIAVVTGATGGMGIEIVKDLSR-D-------HIVYALGRNPEHLAALAE-I-----EGVEPIESDIVKEVLEEGGVDKL 70 (245)
T ss_dssp -CEEEEESTTSHHHHHHHHHHTT-T-------SEEEEEESCHHHHHHHHT-S-----TTEEEEECCHHHHHHTSSSCGGG
T ss_pred CCEEEEEcCCCHHHHHHHHHHhC-C-------CeEEEEeCCHHHHHHHHh-h-----cCCcceecccchHHHHHHHHHHH
Confidence 35799999999999999999987 6 689999999999877665 2 357888999988755222 22
Q ss_pred ---cCccEEeecCCCCC
Q 012947 87 ---SQTKLLLNCVGPYR 100 (452)
Q Consensus 87 ---~~~dvVIn~aGp~~ 100 (452)
.++|+||||||...
T Consensus 71 ~~~~~id~lv~~Ag~~~ 87 (245)
T 3e9n_A 71 KNLDHVDTLVHAAAVAR 87 (245)
T ss_dssp TTCSCCSEEEECC----
T ss_pred HhcCCCCEEEECCCcCC
Confidence 26899999999653
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=98.78 E-value=3.2e-09 Score=102.95 Aligned_cols=64 Identities=13% Similarity=0.263 Sum_probs=55.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~-- 88 (452)
|+|+|+|||||+|++++++|+ ++ ++|.+.+|+.. .+.+|++|++++.+++++
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g-------~~V~~~~r~~~------------------~~~~D~~d~~~~~~~~~~~~ 54 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PV-------GNLIALDVHSK------------------EFCGDFSNPKGVAETVRKLR 54 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TT-------SEEEEECTTCS------------------SSCCCTTCHHHHHHHHHHHC
T ss_pred CeEEEECCCCHHHHHHHHHhh-cC-------CeEEEeccccc------------------cccccCCCHHHHHHHHHhcC
Confidence 479999999999999999999 77 79999999751 235799999999999986
Q ss_pred ccEEeecCCCCC
Q 012947 89 TKLLLNCVGPYR 100 (452)
Q Consensus 89 ~dvVIn~aGp~~ 100 (452)
+|+|||+||...
T Consensus 55 ~d~vih~a~~~~ 66 (299)
T 1n2s_A 55 PDVIVNAAAHTA 66 (299)
T ss_dssp CSEEEECCCCCC
T ss_pred CCEEEECcccCC
Confidence 999999998643
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.78 E-value=5.8e-09 Score=102.04 Aligned_cols=72 Identities=11% Similarity=0.164 Sum_probs=58.7
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCccE
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKL 91 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~dv 91 (452)
+|+|||||||||++++++|+++| ..+++..|+..+.+. + ...+.++.+|++| +++.++++++|+
T Consensus 3 ~vlVTGatG~iG~~l~~~L~~~g-------~~v~~~~~~~~~~~~----~----~~~~~~~~~Dl~~-~~~~~~~~~~d~ 66 (313)
T 3ehe_A 3 LIVVTGGAGFIGSHVVDKLSESN-------EIVVIDNLSSGNEEF----V----NEAARLVKADLAA-DDIKDYLKGAEE 66 (313)
T ss_dssp CEEEETTTSHHHHHHHHHHTTTS-------CEEEECCCSSCCGGG----S----CTTEEEECCCTTT-SCCHHHHTTCSE
T ss_pred EEEEECCCchHHHHHHHHHHhCC-------CEEEEEcCCCCChhh----c----CCCcEEEECcCCh-HHHHHHhcCCCE
Confidence 69999999999999999999987 466666565544321 1 2467889999999 999999999999
Q ss_pred EeecCCCC
Q 012947 92 LLNCVGPY 99 (452)
Q Consensus 92 VIn~aGp~ 99 (452)
|||+|+..
T Consensus 67 vih~a~~~ 74 (313)
T 3ehe_A 67 VWHIAANP 74 (313)
T ss_dssp EEECCCCC
T ss_pred EEECCCCC
Confidence 99999853
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=98.78 E-value=7.8e-09 Score=112.27 Aligned_cols=79 Identities=15% Similarity=0.191 Sum_probs=65.1
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHc-CCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHH-HHHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKL-FNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPS-LHRLC 86 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~-g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~s-l~~~~ 86 (452)
+.++|+|||||||+|++++++|+++ + ++|++.+|+.++++++.+ ..++.++.+|++|+++ +++++
T Consensus 314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g-------~~V~~~~r~~~~~~~~~~------~~~v~~v~~Dl~d~~~~~~~~~ 380 (660)
T 1z7e_A 314 RRTRVLILGVNGFIGNHLTERLLREDH-------YEVYGLDIGSDAISRFLN------HPHFHFVEGDISIHSEWIEYHV 380 (660)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHSSS-------EEEEEEESCCTTTGGGTT------CTTEEEEECCTTTCHHHHHHHH
T ss_pred cCceEEEEcCCcHHHHHHHHHHHhcCC-------CEEEEEEcCchhhhhhcc------CCceEEEECCCCCcHHHHHHhh
Confidence 3468999999999999999999998 5 899999998876543211 3467899999999765 88889
Q ss_pred cCccEEeecCCCCC
Q 012947 87 SQTKLLLNCVGPYR 100 (452)
Q Consensus 87 ~~~dvVIn~aGp~~ 100 (452)
+++|+||||||...
T Consensus 381 ~~~D~Vih~Aa~~~ 394 (660)
T 1z7e_A 381 KKCDVVLPLVAIAT 394 (660)
T ss_dssp HHCSEEEECCCCCC
T ss_pred cCCCEEEECceecC
Confidence 99999999998643
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.78 E-value=3.4e-09 Score=100.46 Aligned_cols=71 Identities=15% Similarity=0.132 Sum_probs=60.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHH-cCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 11 FDVIILGASGFTGKYVVREALK-LFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~-~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..++||||+|+||++++++|++ .+ .+|++.+|+.+.. ...+.++.+|++|+++++++++
T Consensus 5 k~vlITGas~gIG~~~a~~l~~~~g-------~~v~~~~~~~~~~-----------~~~~~~~~~Dv~~~~~v~~~~~~~ 66 (244)
T 4e4y_A 5 ANYLVTGGSKGIGKAVVELLLQNKN-------HTVINIDIQQSFS-----------AENLKFIKADLTKQQDITNVLDII 66 (244)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTSTT-------EEEEEEESSCCCC-----------CTTEEEEECCTTCHHHHHHHHHHT
T ss_pred CeEEEeCCCChHHHHHHHHHHhcCC-------cEEEEeccccccc-----------cccceEEecCcCCHHHHHHHHHHH
Confidence 4799999999999999999998 55 8999999976521 2356889999999999999887
Q ss_pred ---CccEEeecCCCC
Q 012947 88 ---QTKLLLNCVGPY 99 (452)
Q Consensus 88 ---~~dvVIn~aGp~ 99 (452)
+.|+||||||..
T Consensus 67 ~~~~id~lv~nAg~~ 81 (244)
T 4e4y_A 67 KNVSFDGIFLNAGIL 81 (244)
T ss_dssp TTCCEEEEEECCCCC
T ss_pred HhCCCCEEEECCccC
Confidence 789999999964
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=98.77 E-value=6.7e-09 Score=99.03 Aligned_cols=69 Identities=13% Similarity=0.123 Sum_probs=59.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~-- 88 (452)
..++|+||+|+||++++++|+++| ++|++++|+.++++ ...+.+|++|.+++++++++
T Consensus 23 k~vlITGas~gIG~~la~~l~~~G-------~~V~~~~r~~~~~~-------------~~~~~~d~~d~~~v~~~~~~~~ 82 (251)
T 3orf_A 23 KNILVLGGSGALGAEVVKFFKSKS-------WNTISIDFRENPNA-------------DHSFTIKDSGEEEIKSVIEKIN 82 (251)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESSCCTTS-------------SEEEECSCSSHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEeCCccccc-------------ccceEEEeCCHHHHHHHHHHHH
Confidence 469999999999999999999998 89999999987542 13577899999999988764
Q ss_pred -----ccEEeecCCCC
Q 012947 89 -----TKLLLNCVGPY 99 (452)
Q Consensus 89 -----~dvVIn~aGp~ 99 (452)
.|+||||||..
T Consensus 83 ~~~g~iD~li~~Ag~~ 98 (251)
T 3orf_A 83 SKSIKVDTFVCAAGGW 98 (251)
T ss_dssp TTTCCEEEEEECCCCC
T ss_pred HHcCCCCEEEECCccC
Confidence 59999999964
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=98.76 E-value=1.1e-08 Score=102.11 Aligned_cols=77 Identities=10% Similarity=0.096 Sum_probs=59.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
.++|+|+|||||+|++++++|++.|. ++|++++|+..+.+ .+.+ .++. +.+|++|++.++++++
T Consensus 46 ~~~vlVtGatG~iG~~l~~~L~~~g~------~~V~~~~r~~~~~~--~~~~-----~~~~-~~~d~~~~~~~~~~~~~~ 111 (357)
T 2x6t_A 46 GRMIIVTGGAGFIGSNIVKALNDKGI------TDILVVDNLKDGTK--FVNL-----VDLN-IADYMDKEDFLIQIMAGE 111 (357)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTTC------CCEEEEECCSSGGG--GGGT-----TTSC-CSEEEEHHHHHHHHHTTC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC------cEEEEEecCCCcch--hhcc-----cCce-EeeecCcHHHHHHHHhhc
Confidence 36799999999999999999999872 57888999765421 1122 1233 6789999999999997
Q ss_pred ---CccEEeecCCCCC
Q 012947 88 ---QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ---~~dvVIn~aGp~~ 100 (452)
++|+||||||+..
T Consensus 112 ~~~~~d~Vih~A~~~~ 127 (357)
T 2x6t_A 112 EFGDVEAIFHEGACSS 127 (357)
T ss_dssp CCSSCCEEEECCSCCC
T ss_pred ccCCCCEEEECCcccC
Confidence 5999999999754
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=98.76 E-value=8.7e-09 Score=101.96 Aligned_cols=84 Identities=15% Similarity=0.273 Sum_probs=63.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-C
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-Q 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-~ 88 (452)
.++|+|||||||||++++++|+++|.......++|++.+|+.++... . ...++.++.+|++|+++++++++ +
T Consensus 14 ~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~----~---~~~~~~~~~~Dl~d~~~~~~~~~~~ 86 (342)
T 2hrz_A 14 GMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA----G---FSGAVDARAADLSAPGEAEKLVEAR 86 (342)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT----T---CCSEEEEEECCTTSTTHHHHHHHTC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc----c---cCCceeEEEcCCCCHHHHHHHHhcC
Confidence 46899999999999999999999871000000478999998654321 1 13467889999999999999995 8
Q ss_pred ccEEeecCCCCC
Q 012947 89 TKLLLNCVGPYR 100 (452)
Q Consensus 89 ~dvVIn~aGp~~ 100 (452)
+|+||||||+..
T Consensus 87 ~d~vih~A~~~~ 98 (342)
T 2hrz_A 87 PDVIFHLAAIVS 98 (342)
T ss_dssp CSEEEECCCCCH
T ss_pred CCEEEECCccCc
Confidence 999999998653
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.75 E-value=1.6e-09 Score=99.80 Aligned_cols=70 Identities=14% Similarity=0.171 Sum_probs=60.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCce--EEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIK--SLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~--~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
.++|+|+||||++|++++++|++++ . +|.+++|+.++ . ..++.++.+|++|++++.+++
T Consensus 5 ~~~vlVtGatG~iG~~l~~~l~~~g-------~~~~V~~~~r~~~~-----~------~~~~~~~~~D~~~~~~~~~~~- 65 (215)
T 2a35_A 5 PKRVLLAGATGLTGEHLLDRILSEP-------TLAKVIAPARKALA-----E------HPRLDNPVGPLAELLPQLDGS- 65 (215)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCT-------TCCEEECCBSSCCC-----C------CTTEECCBSCHHHHGGGCCSC-
T ss_pred CceEEEECCCcHHHHHHHHHHHhCC-------CCCeEEEEeCCCcc-----c------CCCceEEeccccCHHHHHHhh-
Confidence 3689999999999999999999998 4 89999998765 1 235677889999998888887
Q ss_pred CccEEeecCCCC
Q 012947 88 QTKLLLNCVGPY 99 (452)
Q Consensus 88 ~~dvVIn~aGp~ 99 (452)
+|+||||+|+.
T Consensus 66 -~d~vi~~a~~~ 76 (215)
T 2a35_A 66 -IDTAFCCLGTT 76 (215)
T ss_dssp -CSEEEECCCCC
T ss_pred -hcEEEECeeec
Confidence 99999999864
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=98.74 E-value=1.1e-08 Score=97.70 Aligned_cols=67 Identities=19% Similarity=0.178 Sum_probs=56.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~-- 88 (452)
|+|+|+|||||+|++++++|++ + ++|.+.+|+.+.. .+ +.+|++|++++.+++++
T Consensus 1 m~ilVtGatG~iG~~l~~~L~~-g-------~~V~~~~r~~~~~------------~~---~~~Dl~~~~~~~~~~~~~~ 57 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLSE-R-------HEVIKVYNSSEIQ------------GG---YKLDLTDFPRLEDFIIKKR 57 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHTT-T-------SCEEEEESSSCCT------------TC---EECCTTSHHHHHHHHHHHC
T ss_pred CEEEEECCCChhHHHHHHHHhc-C-------CeEEEecCCCcCC------------CC---ceeccCCHHHHHHHHHhcC
Confidence 3699999999999999999994 6 7899999987420 12 78999999999999986
Q ss_pred ccEEeecCCCCC
Q 012947 89 TKLLLNCVGPYR 100 (452)
Q Consensus 89 ~dvVIn~aGp~~ 100 (452)
+|+||||||...
T Consensus 58 ~d~vi~~a~~~~ 69 (273)
T 2ggs_A 58 PDVIINAAAMTD 69 (273)
T ss_dssp CSEEEECCCCCC
T ss_pred CCEEEECCcccC
Confidence 999999999653
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=98.74 E-value=9.9e-09 Score=101.81 Aligned_cols=78 Identities=13% Similarity=0.202 Sum_probs=58.2
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
..++|+|+|||||+|++++++|++.| ++|++++|+..+..+..+.+. ...++.++.+|+.|+. +.+
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~-----~~~ 91 (343)
T 2b69_A 26 DRKRILITGGAGFVGSHLTDKLMMDG-------HEVTVVDNFFTGRKRNVEHWI--GHENFELINHDVVEPL-----YIE 91 (343)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECCSSCCGGGTGGGT--TCTTEEEEECCTTSCC-----CCC
T ss_pred CCCEEEEEcCccHHHHHHHHHHHHCC-------CEEEEEeCCCccchhhhhhhc--cCCceEEEeCccCChh-----hcC
Confidence 35789999999999999999999998 799999997543211112221 1246788999998753 568
Q ss_pred ccEEeecCCCCC
Q 012947 89 TKLLLNCVGPYR 100 (452)
Q Consensus 89 ~dvVIn~aGp~~ 100 (452)
+|+||||||+..
T Consensus 92 ~d~vih~A~~~~ 103 (343)
T 2b69_A 92 VDQIYHLASPAS 103 (343)
T ss_dssp CSEEEECCSCCS
T ss_pred CCEEEECccccC
Confidence 999999998643
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.73 E-value=2.1e-08 Score=97.47 Aligned_cols=73 Identities=10% Similarity=0.107 Sum_probs=58.3
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHH--HHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC-
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRV--KQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl--~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~- 88 (452)
+|+|+|||||+|++++++|+++|. ++|.+.+|+..+. +.+ . ++. +.+|++|++.+++++++
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~------~~V~~~~r~~~~~~~~~~-~--------~~~-~~~d~~~~~~~~~~~~~~ 64 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGI------TDILVVDNLKDGTKFVNL-V--------DLN-IADYMDKEDFLIQIMAGE 64 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTC------CCEEEEECCSSGGGGHHH-H--------TSC-CSEEEEHHHHHHHHHTTC
T ss_pred CEEEEcCccHHHHHHHHHHHHCCC------cEEEEEccCCCCchhhhc-C--------cce-eccccccHHHHHHHHhcc
Confidence 489999999999999999999872 5788889976542 221 1 123 67899999999999985
Q ss_pred ----ccEEeecCCCCC
Q 012947 89 ----TKLLLNCVGPYR 100 (452)
Q Consensus 89 ----~dvVIn~aGp~~ 100 (452)
+|+||||||+..
T Consensus 65 ~~~~~d~vi~~a~~~~ 80 (310)
T 1eq2_A 65 EFGDVEAIFHEGACSS 80 (310)
T ss_dssp CCSSCCEEEECCSCCC
T ss_pred ccCCCcEEEECccccc
Confidence 999999999754
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=98.73 E-value=2.5e-09 Score=102.18 Aligned_cols=77 Identities=10% Similarity=0.026 Sum_probs=54.8
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH----Hc
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL----CS 87 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~----~~ 87 (452)
.++||||+|+||++++++|+++| ++|++.+|+.++++++.+ +.. ...++..+ |..+.+.+-+. +.
T Consensus 3 ~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~-l~~-~~~~~~~~--d~~~v~~~~~~~~~~~g 71 (254)
T 1zmt_A 3 TAIVTNVKHFGGMGSALRLSEAG-------HTVACHDESFKQKDELEA-FAE-TYPQLKPM--SEQEPAELIEAVTSAYG 71 (254)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTT-------CEEEECCGGGGSHHHHHH-HHH-HCTTSEEC--CCCSHHHHHHHHHHHHS
T ss_pred EEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHH-HHh-cCCcEEEE--CHHHHHHHHHHHHHHhC
Confidence 69999999999999999999998 899999999888776544 311 01233322 54443332221 22
Q ss_pred CccEEeecCCCC
Q 012947 88 QTKLLLNCVGPY 99 (452)
Q Consensus 88 ~~dvVIn~aGp~ 99 (452)
+.|+||||||..
T Consensus 72 ~iD~lv~nAg~~ 83 (254)
T 1zmt_A 72 QVDVLVSNDIFA 83 (254)
T ss_dssp CCCEEEEECCCC
T ss_pred CCCEEEECCCcC
Confidence 789999999965
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=98.73 E-value=1.9e-08 Score=98.11 Aligned_cols=80 Identities=14% Similarity=0.145 Sum_probs=69.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+++|+||+|++|+.+++.|++.| .+|++++|+.++++++.+++.. ..++.++.+|++|+++++++++++
T Consensus 119 gk~vlVtGaaGGiG~aia~~L~~~G-------~~V~i~~R~~~~~~~l~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~ 189 (287)
T 1lu9_A 119 GKKAVVLAGTGPVGMRSAALLAGEG-------AEVVLCGRKLDKAQAAADSVNK--RFKVNVTAAETADDASRAEAVKGA 189 (287)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTT-------CEEEEEESSHHHHHHHHHHHHH--HHTCCCEEEECCSHHHHHHHTTTC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCc-------CEEEEEECCHHHHHHHHHHHHh--cCCcEEEEecCCCHHHHHHHHHhC
Confidence 4579999999999999999999998 7899999999998888776631 124577889999999999999999
Q ss_pred cEEeecCCC
Q 012947 90 KLLLNCVGP 98 (452)
Q Consensus 90 dvVIn~aGp 98 (452)
|+||||+|.
T Consensus 190 DvlVn~ag~ 198 (287)
T 1lu9_A 190 HFVFTAGAI 198 (287)
T ss_dssp SEEEECCCT
T ss_pred CEEEECCCc
Confidence 999999974
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=98.73 E-value=7.6e-09 Score=108.76 Aligned_cols=83 Identities=13% Similarity=0.137 Sum_probs=63.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhH---HHHHHHHhCC--------CCCCCccEEEEeCC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR---VKQALQWASP--------SHSLSIPILTADTT 77 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~k---l~~l~~~l~~--------~~~~~v~~v~~Dl~ 77 (452)
..++|+|||||||+|++++++|.+.+ ++|.+++|+..+ .+++.+.+.. ....++.++.+|++
T Consensus 149 ~~~~VLVTGatG~iG~~l~~~L~~~g-------~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~ 221 (508)
T 4f6l_B 149 PLGNTLLTGATGFLGAYLIEALQGYS-------HRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFE 221 (508)
T ss_dssp CCEEEEESCTTSHHHHHHHHHTBTTE-------EEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTT
T ss_pred CCCeEEEECCccchHHHHHHHHHhcC-------CEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCc
Confidence 34789999999999999999997666 899999998763 2222221100 01357899999999
Q ss_pred CHHHHHHHHcCccEEeecCCCC
Q 012947 78 DPPSLHRLCSQTKLLLNCVGPY 99 (452)
Q Consensus 78 d~~sl~~~~~~~dvVIn~aGp~ 99 (452)
|++++. ...++|+|||||+..
T Consensus 222 d~~~l~-~~~~~D~Vih~Aa~~ 242 (508)
T 4f6l_B 222 CMDDVV-LPENMDTIIHAGART 242 (508)
T ss_dssp BCSSCC-CSSCCSEEEECCCC-
T ss_pred ccccCC-CccCCCEEEECCcee
Confidence 988888 778999999999865
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=98.72 E-value=7.1e-08 Score=101.11 Aligned_cols=83 Identities=16% Similarity=0.158 Sum_probs=67.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCce-EEEEEecChh---HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIK-SLALAGRNPT---RVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~-~v~iagR~~~---kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
...++||||+|+||+.++++|+++| . +|++++|+.. +++++.+++.. ...++.++.+|++|++++.++
T Consensus 226 ~~~vLITGgtGgIG~~la~~La~~G-------~~~vvl~~R~~~~~~~~~~l~~~l~~-~g~~v~~~~~Dv~d~~~v~~~ 297 (486)
T 2fr1_A 226 TGTVLVTGGTGGVGGQIARWLARRG-------APHLLLVSRSGPDADGAGELVAELEA-LGARTTVAACDVTDRESVREL 297 (486)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHT-------CSEEEEEESSGGGSTTHHHHHHHHHH-TTCEEEEEECCTTCHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcC-------CCEEEEEcCCCCCcHHHHHHHHHHHh-cCCEEEEEEeCCCCHHHHHHH
Confidence 4679999999999999999999998 5 5999999875 34555544421 134678899999999999999
Q ss_pred HcCc------cEEeecCCCCC
Q 012947 86 CSQT------KLLLNCVGPYR 100 (452)
Q Consensus 86 ~~~~------dvVIn~aGp~~ 100 (452)
++++ |+||||||...
T Consensus 298 ~~~i~~~g~ld~VIh~AG~~~ 318 (486)
T 2fr1_A 298 LGGIGDDVPLSAVFHAAATLD 318 (486)
T ss_dssp HHTSCTTSCEEEEEECCCCCC
T ss_pred HHHHHhcCCCcEEEECCccCC
Confidence 9875 99999999654
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=98.72 E-value=1.3e-08 Score=101.43 Aligned_cols=79 Identities=13% Similarity=0.037 Sum_probs=64.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~-- 88 (452)
++|+|+|||||+|++++++|+++++.+ ..++|.+.+|+..+.. + ...++.++.+|++|++++.+++++
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~~--~~~~V~~~~r~~~~~~-----~---~~~~~~~~~~Dl~d~~~~~~~~~~~~ 71 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLADTPG--GPWKVYGVARRTRPAW-----H---EDNPINYVQCDISDPDDSQAKLSPLT 71 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTSTTCTT--CSEEEEEEESSCCCSC-----C---CSSCCEEEECCTTSHHHHHHHHTTCT
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCCC--CceEEEEEeCCCCccc-----c---ccCceEEEEeecCCHHHHHHHHhcCC
Confidence 579999999999999999999876100 1168999999876542 1 134688999999999999999998
Q ss_pred -ccEEeecCCCC
Q 012947 89 -TKLLLNCVGPY 99 (452)
Q Consensus 89 -~dvVIn~aGp~ 99 (452)
+|+||||||..
T Consensus 72 ~~d~vih~a~~~ 83 (364)
T 2v6g_A 72 DVTHVFYVTWAN 83 (364)
T ss_dssp TCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 99999999865
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=98.71 E-value=1.8e-08 Score=98.62 Aligned_cols=62 Identities=13% Similarity=0.137 Sum_probs=54.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--C
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--Q 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--~ 88 (452)
++|+|+|||||+|++++++|++.+ ++|+++.|+. .+|+.|++++.++++ +
T Consensus 4 ~~ilVtGatG~iG~~l~~~L~~~g-------~~v~~~~r~~---------------------~~D~~d~~~~~~~~~~~~ 55 (321)
T 1e6u_A 4 QRVFIAGHRGMVGSAIRRQLEQRG-------DVELVLRTRD---------------------ELNLLDSRAVHDFFASER 55 (321)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCT-------TEEEECCCTT---------------------TCCTTCHHHHHHHHHHHC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCC-------CeEEEEecCc---------------------cCCccCHHHHHHHHHhcC
Confidence 589999999999999999999987 7888887752 158999999999999 9
Q ss_pred ccEEeecCCCCC
Q 012947 89 TKLLLNCVGPYR 100 (452)
Q Consensus 89 ~dvVIn~aGp~~ 100 (452)
+|+||||||+..
T Consensus 56 ~d~vih~a~~~~ 67 (321)
T 1e6u_A 56 IDQVYLAAAKVG 67 (321)
T ss_dssp CSEEEECCCCCC
T ss_pred CCEEEEcCeecC
Confidence 999999998653
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.71 E-value=2.1e-08 Score=91.84 Aligned_cols=73 Identities=27% Similarity=0.318 Sum_probs=64.6
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---C
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---Q 88 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~---~ 88 (452)
+++|+||+|++|++++++|+++ +|++.+|+.++++++.+++. . .++.+|++|+++++++++ +
T Consensus 2 ~vlVtGasg~iG~~la~~l~~~---------~V~~~~r~~~~~~~~~~~~~-----~-~~~~~D~~~~~~~~~~~~~~~~ 66 (207)
T 2yut_A 2 RVLITGATGGLGGAFARALKGH---------DLLLSGRRAGALAELAREVG-----A-RALPADLADELEAKALLEEAGP 66 (207)
T ss_dssp EEEEETTTSHHHHHHHHHTTTS---------EEEEECSCHHHHHHHHHHHT-----C-EECCCCTTSHHHHHHHHHHHCS
T ss_pred EEEEEcCCcHHHHHHHHHHHhC---------CEEEEECCHHHHHHHHHhcc-----C-cEEEeeCCCHHHHHHHHHhcCC
Confidence 6999999999999999999763 68899999999988877763 2 788899999999999998 8
Q ss_pred ccEEeecCCCC
Q 012947 89 TKLLLNCVGPY 99 (452)
Q Consensus 89 ~dvVIn~aGp~ 99 (452)
+|+||||||..
T Consensus 67 id~vi~~ag~~ 77 (207)
T 2yut_A 67 LDLLVHAVGKA 77 (207)
T ss_dssp EEEEEECCCCC
T ss_pred CCEEEECCCcC
Confidence 99999999964
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=98.70 E-value=3.6e-09 Score=112.04 Aligned_cols=84 Identities=15% Similarity=0.073 Sum_probs=65.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEE-ecC-------------hhHHHHHHHHhCCCCCCCccEEEEe
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRN-------------PTRVKQALQWASPSHSLSIPILTAD 75 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~ia-gR~-------------~~kl~~l~~~l~~~~~~~v~~v~~D 75 (452)
...++||||+|+||..++++|+++|. .++++. +|+ .++++++.+++.. ...++.++.+|
T Consensus 251 ~~~vLITGgsgGIG~~lA~~La~~G~------~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~v~~~~~D 323 (525)
T 3qp9_A 251 DGTVLVTGAEEPAAAEAARRLARDGA------GHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELAD-LGATATVVTCD 323 (525)
T ss_dssp TSEEEESSTTSHHHHHHHHHHHHHTC------CEEEEEECCCC---------------CHHHHHHHHH-HTCEEEEEECC
T ss_pred CCEEEEECCCCcHHHHHHHHHHHcCC------CEEEEEeCCCCCCccccccccccCHHHHHHHHHHHh-cCCEEEEEECC
Confidence 46799999999999999999999982 347788 998 3455555555521 13468899999
Q ss_pred CCCHHHHHHHHcC------ccEEeecCCCCC
Q 012947 76 TTDPPSLHRLCSQ------TKLLLNCVGPYR 100 (452)
Q Consensus 76 l~d~~sl~~~~~~------~dvVIn~aGp~~ 100 (452)
++|++++++++++ .|+||||||...
T Consensus 324 vtd~~~v~~~~~~i~~~g~id~vVh~AGv~~ 354 (525)
T 3qp9_A 324 LTDAEAAARLLAGVSDAHPLSAVLHLPPTVD 354 (525)
T ss_dssp TTSHHHHHHHHHTSCTTSCEEEEEECCCCCC
T ss_pred CCCHHHHHHHHHHHHhcCCCcEEEECCcCCC
Confidence 9999999999985 599999999654
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=98.67 E-value=2.2e-08 Score=91.56 Aligned_cols=64 Identities=23% Similarity=0.354 Sum_probs=56.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~- 88 (452)
+++++|+||+|++|++++++|+ +| ++|++.+|+.+ .+.+|++|++++++++++
T Consensus 3 kM~vlVtGasg~iG~~~~~~l~-~g-------~~V~~~~r~~~------------------~~~~D~~~~~~~~~~~~~~ 56 (202)
T 3d7l_A 3 AMKILLIGASGTLGSAVKERLE-KK-------AEVITAGRHSG------------------DVTVDITNIDSIKKMYEQV 56 (202)
T ss_dssp SCEEEEETTTSHHHHHHHHHHT-TT-------SEEEEEESSSS------------------SEECCTTCHHHHHHHHHHH
T ss_pred CcEEEEEcCCcHHHHHHHHHHH-CC-------CeEEEEecCcc------------------ceeeecCCHHHHHHHHHHh
Confidence 3589999999999999999999 88 89999999753 357899999999998876
Q ss_pred --ccEEeecCCCC
Q 012947 89 --TKLLLNCVGPY 99 (452)
Q Consensus 89 --~dvVIn~aGp~ 99 (452)
+|+||||||..
T Consensus 57 ~~~d~vi~~ag~~ 69 (202)
T 3d7l_A 57 GKVDAIVSATGSA 69 (202)
T ss_dssp CCEEEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 89999999954
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=98.66 E-value=7.9e-09 Score=98.26 Aligned_cols=68 Identities=12% Similarity=0.068 Sum_probs=58.2
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc--
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT-- 89 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~-- 89 (452)
.++||||+|+||+.++++|+++| ++|++++|+.++++. . +.+|++|++++++++++.
T Consensus 3 ~vlVTGas~gIG~~~a~~l~~~G-------~~V~~~~r~~~~~~~-------------~-~~~Dl~~~~~v~~~~~~~~~ 61 (257)
T 1fjh_A 3 IIVISGCATGIGAATRKVLEAAG-------HQIVGIDIRDAEVIA-------------D-LSTAEGRKQAIADVLAKCSK 61 (257)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESSSSSEEC-------------C-TTSHHHHHHHHHHHHTTCTT
T ss_pred EEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEeCCchhhcc-------------c-cccCCCCHHHHHHHHHHhCC
Confidence 69999999999999999999998 899999998765421 1 457999999999998755
Q ss_pred --cEEeecCCCCC
Q 012947 90 --KLLLNCVGPYR 100 (452)
Q Consensus 90 --dvVIn~aGp~~ 100 (452)
|+||||||...
T Consensus 62 ~id~lv~~Ag~~~ 74 (257)
T 1fjh_A 62 GMDGLVLCAGLGP 74 (257)
T ss_dssp CCSEEEECCCCCT
T ss_pred CCCEEEECCCCCC
Confidence 99999999754
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.66 E-value=4.7e-08 Score=91.70 Aligned_cols=70 Identities=9% Similarity=0.015 Sum_probs=61.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
.+++|+||||+||+.++++|+++| ++|++.+|+.+ . .++.++.+|++|+++++++++
T Consensus 3 k~vlVtGasggiG~~la~~l~~~G-------~~V~~~~r~~~-~------------~~~~~~~~D~~~~~~~~~~~~~~~ 62 (242)
T 1uay_A 3 RSALVTGGASGLGRAAALALKARG-------YRVVVLDLRRE-G------------EDLIYVEGDVTREEDVRRAVARAQ 62 (242)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHT-------CEEEEEESSCC-S------------SSSEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC-------CEEEEEccCcc-c------------cceEEEeCCCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 89999999875 1 245788999999999999987
Q ss_pred ---CccEEeecCCCCC
Q 012947 88 ---QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ---~~dvVIn~aGp~~ 100 (452)
+.|+||||||...
T Consensus 63 ~~~~~d~li~~ag~~~ 78 (242)
T 1uay_A 63 EEAPLFAVVSAAGVGL 78 (242)
T ss_dssp HHSCEEEEEECCCCCC
T ss_pred hhCCceEEEEcccccC
Confidence 7899999999643
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=98.66 E-value=1.6e-08 Score=95.93 Aligned_cols=76 Identities=12% Similarity=0.036 Sum_probs=56.1
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEE-e--cChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH-HH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-G--RNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHR-LC 86 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~ia-g--R~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~-~~ 86 (452)
..++||||+|+||+++++.|+++| ++|+++ + |+.++++++.+++ . ..++. |..+.+.+-+ +.
T Consensus 2 k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~~~~r~~~~~~~~~~~~-~----~~~~~--~~~~v~~~~~~~~ 67 (244)
T 1zmo_A 2 VIALVTHARHFAGPAAVEALTQDG-------YTVVCHDASFADAAERQRFESEN-P----GTIAL--AEQKPERLVDATL 67 (244)
T ss_dssp CEEEESSTTSTTHHHHHHHHHHTT-------CEEEECCGGGGSHHHHHHHHHHS-T----TEEEC--CCCCGGGHHHHHG
T ss_pred CEEEEECCCChHHHHHHHHHHHCC-------CEEEEecCCcCCHHHHHHHHHHh-C----CCccc--CHHHHHHHHHHHH
Confidence 369999999999999999999998 899999 7 9999998887765 1 11221 4444333322 22
Q ss_pred ---cCccEEeecCCCCC
Q 012947 87 ---SQTKLLLNCVGPYR 100 (452)
Q Consensus 87 ---~~~dvVIn~aGp~~ 100 (452)
.+.|+||||||...
T Consensus 68 ~~~g~iD~lv~~Ag~~~ 84 (244)
T 1zmo_A 68 QHGEAIDTIVSNDYIPR 84 (244)
T ss_dssp GGSSCEEEEEECCCCCT
T ss_pred HHcCCCCEEEECCCcCC
Confidence 26899999998643
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=98.65 E-value=1.5e-08 Score=94.62 Aligned_cols=62 Identities=18% Similarity=0.224 Sum_probs=55.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+|+||++++++|+++| ++|++.+|+.+ +|++|+++++++++
T Consensus 6 ~k~vlVTGas~gIG~~~a~~l~~~G-------~~V~~~~r~~~---------------------~D~~~~~~v~~~~~~~ 57 (223)
T 3uce_A 6 KTVYVVLGGTSGIGAELAKQLESEH-------TIVHVASRQTG---------------------LDISDEKSVYHYFETI 57 (223)
T ss_dssp CEEEEEETTTSHHHHHHHHHHCSTT-------EEEEEESGGGT---------------------CCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-------CEEEEecCCcc---------------------cCCCCHHHHHHHHHHh
Confidence 3579999999999999999999998 89999998754 69999999998886
Q ss_pred -CccEEeecCCCC
Q 012947 88 -QTKLLLNCVGPY 99 (452)
Q Consensus 88 -~~dvVIn~aGp~ 99 (452)
+.|+||||||..
T Consensus 58 g~id~lv~nAg~~ 70 (223)
T 3uce_A 58 GAFDHLIVTAGSY 70 (223)
T ss_dssp CSEEEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 689999999965
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=98.64 E-value=2.8e-08 Score=93.81 Aligned_cols=68 Identities=12% Similarity=0.107 Sum_probs=58.5
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc----
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~---- 87 (452)
+|+||||||++|++++++|+++| ++|++++|+.++++. . +.+|++|+++++++++
T Consensus 3 ~vlVtGasg~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~-----------~---~~~D~~~~~~~~~~~~~~~~ 61 (255)
T 2dkn_A 3 VIAITGSASGIGAALKELLARAG-------HTVIGIDRGQADIEA-----------D---LSTPGGRETAVAAVLDRCGG 61 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESSSSSEEC-----------C---TTSHHHHHHHHHHHHHHHTT
T ss_pred EEEEeCCCcHHHHHHHHHHHhCC-------CEEEEEeCChhHccc-----------c---ccCCcccHHHHHHHHHHcCC
Confidence 69999999999999999999998 799999998765311 1 4579999999999887
Q ss_pred CccEEeecCCCCC
Q 012947 88 QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ~~dvVIn~aGp~~ 100 (452)
++|+||||||...
T Consensus 62 ~~d~vi~~Ag~~~ 74 (255)
T 2dkn_A 62 VLDGLVCCAGVGV 74 (255)
T ss_dssp CCSEEEECCCCCT
T ss_pred CccEEEECCCCCC
Confidence 8999999999754
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=98.63 E-value=9.8e-08 Score=94.80 Aligned_cols=89 Identities=13% Similarity=0.038 Sum_probs=61.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~--~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
++++|+|+||+||+|++++..|+..+.....+..+|.+.+++. ++++....++. ...+.++ .|+.+.+++.+++
T Consensus 3 ~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~---~~~~~~~-~di~~~~~~~~a~ 78 (327)
T 1y7t_A 3 APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELE---DCAFPLL-AGLEATDDPKVAF 78 (327)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHH---TTTCTTE-EEEEEESCHHHHT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhh---ccccccc-CCeEeccChHHHh
Confidence 4578999999999999999999987620000013899999874 44444333442 1122333 6777767788889
Q ss_pred cCccEEeecCCCCCC
Q 012947 87 SQTKLLLNCVGPYRL 101 (452)
Q Consensus 87 ~~~dvVIn~aGp~~~ 101 (452)
+++|+|||+||....
T Consensus 79 ~~~D~Vih~Ag~~~~ 93 (327)
T 1y7t_A 79 KDADYALLVGAAPRK 93 (327)
T ss_dssp TTCSEEEECCCCCCC
T ss_pred CCCCEEEECCCcCCC
Confidence 999999999997543
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=98.60 E-value=9.3e-08 Score=100.80 Aligned_cols=83 Identities=17% Similarity=0.189 Sum_probs=68.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCce-EEEEEecChh---HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIK-SLALAGRNPT---RVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~-~v~iagR~~~---kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
...++||||+|+||+.++++|+++| . +|++.+|+.. +++++.+++.. ...++.++.+|++|+++++++
T Consensus 259 ~~~vLITGgtGgIG~~lA~~La~~G-------~~~vvl~~R~~~~~~~~~~l~~~l~~-~g~~v~~~~~Dvtd~~~v~~~ 330 (511)
T 2z5l_A 259 SGTVLITGGMGAIGRRLARRLAAEG-------AERLVLTSRRGPEAPGAAELAEELRG-HGCEVVHAACDVAERDALAAL 330 (511)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTT-------CSEEEEEESSGGGSTTHHHHHHHHHT-TTCEEEEEECCSSCHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC-------CcEEEEEecCCcccHHHHHHHHHHHh-cCCEEEEEEeCCCCHHHHHHH
Confidence 4679999999999999999999988 5 6999999863 45556555532 234678899999999999999
Q ss_pred HcC--ccEEeecCCCCC
Q 012947 86 CSQ--TKLLLNCVGPYR 100 (452)
Q Consensus 86 ~~~--~dvVIn~aGp~~ 100 (452)
+++ +|+||||||...
T Consensus 331 ~~~~~ld~VVh~AGv~~ 347 (511)
T 2z5l_A 331 VTAYPPNAVFHTAGILD 347 (511)
T ss_dssp HHHSCCSEEEECCCCCC
T ss_pred HhcCCCcEEEECCcccC
Confidence 986 999999999653
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=98.59 E-value=1.2e-08 Score=106.08 Aligned_cols=78 Identities=15% Similarity=0.134 Sum_probs=64.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~--~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
...++||||+|+||+.++++|+++| .+|++++|+. ++++++.+++ .+.++.+|++|+++++++++
T Consensus 213 gk~~LVTGgsgGIG~aiA~~La~~G-------a~Vvl~~r~~~~~~l~~~~~~~------~~~~~~~Dvtd~~~v~~~~~ 279 (454)
T 3u0b_A 213 GKVAVVTGAARGIGATIAEVFARDG-------ATVVAIDVDGAAEDLKRVADKV------GGTALTLDVTADDAVDKITA 279 (454)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTT-------CEEEEEECGGGHHHHHHHHHHH------TCEEEECCTTSTTHHHHHHH
T ss_pred CCEEEEeCCchHHHHHHHHHHHHCC-------CEEEEEeCCccHHHHHHHHHHc------CCeEEEEecCCHHHHHHHHH
Confidence 4579999999999999999999998 7999999964 4455555554 35689999999999988876
Q ss_pred --------CccEEeecCCCCC
Q 012947 88 --------QTKLLLNCVGPYR 100 (452)
Q Consensus 88 --------~~dvVIn~aGp~~ 100 (452)
..|+||||||...
T Consensus 280 ~~~~~~g~~id~lV~nAGv~~ 300 (454)
T 3u0b_A 280 HVTEHHGGKVDILVNNAGITR 300 (454)
T ss_dssp HHHHHSTTCCSEEEECCCCCC
T ss_pred HHHHHcCCCceEEEECCcccC
Confidence 3899999999754
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.56 E-value=7.4e-09 Score=111.64 Aligned_cols=109 Identities=9% Similarity=-0.025 Sum_probs=71.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec---------ChhHHHHHHHHhCCCCCCCccEEEEeCCCHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR---------NPTRVKQALQWASPSHSLSIPILTADTTDPP 80 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR---------~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~ 80 (452)
...++||||+|+||+.+++.|+++| ++|++.+| +.++++++.+++.. ....+.+|++|.+
T Consensus 19 gk~~lVTGas~GIG~aiA~~La~~G-------a~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~----~~~~~~~D~~d~~ 87 (613)
T 3oml_A 19 GRVAVVTGAGAGLGREYALLFAERG-------AKVVVNDLGGTHSGDGASQRAADIVVDEIRK----AGGEAVADYNSVI 87 (613)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTT-------CEEEEC--------------CHHHHHHHHHH----TTCCEEECCCCGG
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCcccccccCCHHHHHHHHHHHHH----hCCeEEEEeCCHH
Confidence 4569999999999999999999998 89999987 77777777776632 1122458999999
Q ss_pred HHHHHHc-------CccEEeecCCCCCCC-----CHHHHHHHHHhCCcEEEecCcHHHHHHHHHHH
Q 012947 81 SLHRLCS-------QTKLLLNCVGPYRLH-----GDPVAAACVHSGCDYLDISGEPEFMERMEARY 134 (452)
Q Consensus 81 sl~~~~~-------~~dvVIn~aGp~~~~-----~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~ 134 (452)
+++++++ +.|+||||||..... ...-.+...+ +++.|....++.....+
T Consensus 88 ~~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~-----vNl~g~~~l~~~~~p~m 148 (613)
T 3oml_A 88 DGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVND-----VHLKGSFKCTQAAFPYM 148 (613)
T ss_dssp GHHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHH-----HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHH-----HHHHHHHHHHHHHHHHH
Confidence 8888877 579999999965321 2222333332 34445555555554433
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.56 E-value=3.6e-08 Score=95.51 Aligned_cols=65 Identities=15% Similarity=0.177 Sum_probs=51.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~- 88 (452)
.++|+|+|||||+|++++++|++++ . +... ....+..+.+|++|++++.+++++
T Consensus 6 ~~~vlVtGatG~iG~~l~~~L~~~g-------~------~~~~------------~~~~~~~~~~D~~d~~~~~~~~~~~ 60 (319)
T 4b8w_A 6 SMRILVTGGSGLVGKAIQKVVADGA-------G------LPGE------------DWVFVSSKDADLTDTAQTRALFEKV 60 (319)
T ss_dssp CCEEEEETCSSHHHHHHHHHHHTTT-------C------CTTC------------EEEECCTTTCCTTSHHHHHHHHHHS
T ss_pred CCeEEEECCCcHHHHHHHHHHHhcC-------C------cccc------------cccccCceecccCCHHHHHHHHhhc
Confidence 4689999999999999999999987 3 1100 011234456899999999999987
Q ss_pred -ccEEeecCCCC
Q 012947 89 -TKLLLNCVGPY 99 (452)
Q Consensus 89 -~dvVIn~aGp~ 99 (452)
+|+|||||++.
T Consensus 61 ~~d~Vih~A~~~ 72 (319)
T 4b8w_A 61 QPTHVIHLAAMV 72 (319)
T ss_dssp CCSEEEECCCCC
T ss_pred CCCEEEECceec
Confidence 99999999974
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=98.55 E-value=1.3e-07 Score=94.77 Aligned_cols=79 Identities=20% Similarity=0.235 Sum_probs=59.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCce-EEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIK-SLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~-~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
|+|+|+|||||+|++++++|++++ . +|+.++|+ .|+++++++++++
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g-------~~~v~~~d~~--------------------------~d~~~l~~~~~~~ 47 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTT-------DHHIFEVHRQ--------------------------TKEEELESALLKA 47 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHC-------CCEEEECCTT--------------------------CCHHHHHHHHHHC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC-------CCEEEEECCC--------------------------CCHHHHHHHhccC
Confidence 579999999999999999999998 4 66655553 6788999999999
Q ss_pred cEEeecCCCCCCC------------CHHHHHHHHHhCC--cEEEecC
Q 012947 90 KLLLNCVGPYRLH------------GDPVAAACVHSGC--DYLDISG 122 (452)
Q Consensus 90 dvVIn~aGp~~~~------------~~~vv~ac~~~g~--~yvDlsg 122 (452)
|+|||+||+.... ..+++++|.+.++ ++|.+|.
T Consensus 48 d~Vih~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss 94 (369)
T 3st7_A 48 DFIVHLAGVNRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSS 94 (369)
T ss_dssp SEEEECCCSBCTTCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEE
T ss_pred CEEEECCcCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCc
Confidence 9999999864321 1456666666653 3555543
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=98.53 E-value=2.7e-07 Score=93.65 Aligned_cols=80 Identities=11% Similarity=-0.088 Sum_probs=63.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHH-cCCCCCCCceEEEEEecChhHH---------------HHHHHHhCCCCCCCccEE
Q 012947 9 ELFDVIILGASGFTGKYVVREALK-LFNFPSSPIKSLALAGRNPTRV---------------KQALQWASPSHSLSIPIL 72 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~-~g~~~~~~~~~v~iagR~~~kl---------------~~l~~~l~~~~~~~v~~v 72 (452)
....++||||+++||+++++.|++ +| ++|++++|+.+.+ ++..++. ...+..+
T Consensus 46 ~gKvaLVTGas~GIG~AiA~~LA~g~G-------A~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~----G~~a~~i 114 (405)
T 3zu3_A 46 GPKRVLVIGASTGYGLAARITAAFGCG-------ADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQK----GLYAKSI 114 (405)
T ss_dssp CCSEEEEESCSSHHHHHHHHHHHHHHC-------CEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHT----TCCEEEE
T ss_pred CCCEEEEeCcchHHHHHHHHHHHHhcC-------CEEEEEeCCchhhhhhcccccchhHHHHHHHHHhc----CCceEEE
Confidence 356799999999999999999999 98 8999999875432 2222322 3467788
Q ss_pred EEeCCCHHHHHHHHc-------CccEEeecCCCC
Q 012947 73 TADTTDPPSLHRLCS-------QTKLLLNCVGPY 99 (452)
Q Consensus 73 ~~Dl~d~~sl~~~~~-------~~dvVIn~aGp~ 99 (452)
.+|++|+++++++++ +.|+||||||..
T Consensus 115 ~~Dvtd~~~v~~~v~~i~~~~G~IDiLVNNAG~~ 148 (405)
T 3zu3_A 115 NGDAFSDEIKQLTIDAIKQDLGQVDQVIYSLASP 148 (405)
T ss_dssp ESCTTSHHHHHHHHHHHHHHTSCEEEEEECCCCS
T ss_pred ECCCCCHHHHHHHHHHHHHHcCCCCEEEEcCccc
Confidence 999999999988876 579999999853
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=98.51 E-value=1.4e-07 Score=101.36 Aligned_cols=109 Identities=17% Similarity=0.135 Sum_probs=72.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh---------hHHHHHHHHhCCCCCCCccEEEEeCCCHHH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP---------TRVKQALQWASPSHSLSIPILTADTTDPPS 81 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~---------~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~s 81 (452)
..++||||+++||+.+++.|+++| ++|++.+|+. ++++++.+++.. ... . ..+|++|.++
T Consensus 9 kvalVTGas~GIG~a~A~~la~~G-------a~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~-~g~--~-~~~d~~d~~~ 77 (604)
T 2et6_A 9 KVVIITGAGGGLGKYYSLEFAKLG-------AKVVVNDLGGALNGQGGNSKAADVVVDEIVK-NGG--V-AVADYNNVLD 77 (604)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT-------CEEEEECC-----------CHHHHHHHHHHH-TTC--E-EEEECCCTTC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHcC-------CEEEEEeCCccccccccchHHHHHHHHHHHh-cCC--e-EEEEcCCHHH
Confidence 569999999999999999999999 8999988765 667777666631 111 2 3467777755
Q ss_pred HHHHHc-------CccEEeecCCCCCC-----CCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHH
Q 012947 82 LHRLCS-------QTKLLLNCVGPYRL-----HGDPVAAACVHSGCDYLDISGEPEFMERMEARYH 135 (452)
Q Consensus 82 l~~~~~-------~~dvVIn~aGp~~~-----~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~ 135 (452)
++++++ +.|+||||||.... .....++...+ |++.|....++...+.+.
T Consensus 78 ~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~-----vNl~g~~~~~~a~~p~m~ 138 (604)
T 2et6_A 78 GDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVID-----VHLNGAFAVTKAAWPYFQ 138 (604)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHH-----HHTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHH-----HHhHHHHHHHHHHHHHHH
Confidence 544433 68999999996432 22333444433 455666666777655553
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.48 E-value=2.3e-07 Score=90.13 Aligned_cols=61 Identities=18% Similarity=0.181 Sum_probs=47.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
|+|+|||||||||++++++|.++| ++|.+..|++++. -+.. .+...+.++++|
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G-------~~V~~l~R~~~~~----------------~~~~----~~~~~~~l~~~d 53 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARG-------HEVTLVSRKPGPG----------------RITW----DELAASGLPSCD 53 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESSCCTT----------------EEEH----HHHHHHCCCSCS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEECCCCcC----------------eeec----chhhHhhccCCC
Confidence 689999999999999999999998 8999999975321 1111 233345678899
Q ss_pred EEeecCCC
Q 012947 91 LLLNCVGP 98 (452)
Q Consensus 91 vVIn~aGp 98 (452)
+|||+||.
T Consensus 54 ~vihla~~ 61 (298)
T 4b4o_A 54 AAVNLAGE 61 (298)
T ss_dssp EEEECCCC
T ss_pred EEEEeccC
Confidence 99999974
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=98.48 E-value=2.2e-08 Score=97.69 Aligned_cols=70 Identities=11% Similarity=0.183 Sum_probs=51.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhH----HHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR----VKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~k----l~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
.++|+|+|||||+|++++++|+++| ++|++++|+... .+.+.+.. ...++.++.+|++
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~-------- 68 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASG-------EEVTVLDDLRVPPMIPPEGTGKFL---EKPVLELEERDLS-------- 68 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-------CCEEEECCCSSCCSSCCTTSSEEE---CSCGGGCCHHHHT--------
T ss_pred CCeEEEECCCChHHHHHHHHHHHCC-------CEEEEEecCCcccccchhhhhhhc---cCCCeeEEeCccc--------
Confidence 4689999999999999999999998 799999998762 21111100 1134455555554
Q ss_pred HcCccEEeecCCCC
Q 012947 86 CSQTKLLLNCVGPY 99 (452)
Q Consensus 86 ~~~~dvVIn~aGp~ 99 (452)
++|+||||||..
T Consensus 69 --~~d~vi~~a~~~ 80 (321)
T 3vps_A 69 --DVRLVYHLASHK 80 (321)
T ss_dssp --TEEEEEECCCCC
T ss_pred --cCCEEEECCccC
Confidence 899999999864
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=98.46 E-value=2.7e-07 Score=96.82 Aligned_cols=82 Identities=18% Similarity=0.208 Sum_probs=66.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh---hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP---TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~---~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
..++||||+|+||+.++++|+++|. .++++.+|+. ++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 240 ~~vLITGgsgGIG~alA~~La~~Ga------~~vvl~~R~~~~~~~~~~l~~~l~~-~g~~v~~~~~Dvtd~~~v~~~~~ 312 (496)
T 3mje_A 240 GSVLVTGGTGGIGGRVARRLAEQGA------AHLVLTSRRGADAPGAAELRAELEQ-LGVRVTIAACDAADREALAALLA 312 (496)
T ss_dssp SEEEEETCSSHHHHHHHHHHHHTTC------SEEEEEESSGGGSTTHHHHHHHHHH-TTCEEEEEECCTTCHHHHHHHHH
T ss_pred CEEEEECCCCchHHHHHHHHHHCCC------cEEEEEeCCCCChHHHHHHHHHHHh-cCCeEEEEEccCCCHHHHHHHHH
Confidence 5799999999999999999999982 3899999973 345555554421 23578899999999999999987
Q ss_pred C------ccEEeecCCCC
Q 012947 88 Q------TKLLLNCVGPY 99 (452)
Q Consensus 88 ~------~dvVIn~aGp~ 99 (452)
+ .|+||||||..
T Consensus 313 ~i~~~g~ld~vVh~AGv~ 330 (496)
T 3mje_A 313 ELPEDAPLTAVFHSAGVA 330 (496)
T ss_dssp TCCTTSCEEEEEECCCCC
T ss_pred HHHHhCCCeEEEECCccc
Confidence 4 69999999975
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=98.42 E-value=1.6e-07 Score=98.91 Aligned_cols=66 Identities=15% Similarity=0.137 Sum_probs=54.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
.++|+|+|||||+|++++++|++.| ++|.+++|+..+. ..+.+|++| .+.+.++++
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G-------~~V~~l~R~~~~~---------------~~v~~d~~~--~~~~~l~~~ 202 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGG-------HEVIQLVRKEPKP---------------GKRFWDPLN--PASDLLDGA 202 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEESSSCCT---------------TCEECCTTS--CCTTTTTTC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEECCCCCc---------------cceeecccc--hhHHhcCCC
Confidence 6799999999999999999999998 8999999987652 125667764 346677899
Q ss_pred cEEeecCCCC
Q 012947 90 KLLLNCVGPY 99 (452)
Q Consensus 90 dvVIn~aGp~ 99 (452)
|+||||||+.
T Consensus 203 D~Vih~A~~~ 212 (516)
T 3oh8_A 203 DVLVHLAGEP 212 (516)
T ss_dssp SEEEECCCC-
T ss_pred CEEEECCCCc
Confidence 9999999964
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=98.41 E-value=9.5e-07 Score=75.66 Aligned_cols=94 Identities=13% Similarity=0.121 Sum_probs=71.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-HcCc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~-~~~~ 89 (452)
.+|+|+|+ |.+|+.+++.|.+.+ ++|.+.+|++++++.+.+ .....+.+|..|++.+.++ ++++
T Consensus 7 ~~v~I~G~-G~iG~~~a~~l~~~g-------~~v~~~d~~~~~~~~~~~-------~~~~~~~~d~~~~~~l~~~~~~~~ 71 (144)
T 2hmt_A 7 KQFAVIGL-GRFGGSIVKELHRMG-------HEVLAVDINEEKVNAYAS-------YATHAVIANATEENELLSLGIRNF 71 (144)
T ss_dssp CSEEEECC-SHHHHHHHHHHHHTT-------CCCEEEESCHHHHHTTTT-------TCSEEEECCTTCHHHHHTTTGGGC
T ss_pred CcEEEECC-CHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHH-------hCCEEEEeCCCCHHHHHhcCCCCC
Confidence 36999998 999999999999988 788999999887654322 2345678899998888876 7899
Q ss_pred cEEeecCCCCCCCCHHHHHHHHHhCCcEEE
Q 012947 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLD 119 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~~~g~~yvD 119 (452)
|+||++++........+.+.+.+.+...+-
T Consensus 72 d~vi~~~~~~~~~~~~~~~~~~~~~~~~ii 101 (144)
T 2hmt_A 72 EYVIVAIGANIQASTLTTLLLKELDIPNIW 101 (144)
T ss_dssp SEEEECCCSCHHHHHHHHHHHHHTTCSEEE
T ss_pred CEEEECCCCchHHHHHHHHHHHHcCCCeEE
Confidence 999999975322224566777777765443
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=98.36 E-value=1.6e-07 Score=104.14 Aligned_cols=84 Identities=15% Similarity=0.244 Sum_probs=68.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHH-HcCCCCCCCce-EEEEEecC---hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREAL-KLFNFPSSPIK-SLALAGRN---PTRVKQALQWASPSHSLSIPILTADTTDPPSLH 83 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~-~~g~~~~~~~~-~v~iagR~---~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~ 83 (452)
....++|+||+|++|+.++++|+ ++| . ++++.+|+ .++++++.+++.. ...++.++.+|++|+++++
T Consensus 529 ~~~~~lItGg~~GlG~aiA~~la~~~G-------a~~vvl~~R~~~~~~~~~~~~~~l~~-~G~~v~~~~~Dvsd~~~v~ 600 (795)
T 3slk_A 529 AAGTVLVTGGTGALGAEVARHLVIERG-------VRNLVLVSRRGPAASGAAELVAQLTA-YGAEVSLQACDVADRETLA 600 (795)
T ss_dssp TTSEEEEETTTSHHHHHHHHHHHHTSS-------CCEEEEEESSGGGSTTHHHHHHHHHH-TTCEEEEEECCTTCHHHHH
T ss_pred cccceeeccCCCCcHHHHHHHHHHHcC-------CcEEEEeccCccchHHHHHHHHHHHh-cCCcEEEEEeecCCHHHHH
Confidence 34679999999999999999999 677 5 69999999 4556666666532 2356889999999999999
Q ss_pred HHHcC------ccEEeecCCCCC
Q 012947 84 RLCSQ------TKLLLNCVGPYR 100 (452)
Q Consensus 84 ~~~~~------~dvVIn~aGp~~ 100 (452)
+++++ .|+||||||...
T Consensus 601 ~~~~~~~~~~~id~lVnnAGv~~ 623 (795)
T 3slk_A 601 KVLASIPDEHPLTAVVHAAGVLD 623 (795)
T ss_dssp HHHHTSCTTSCEEEEEECCCCCC
T ss_pred HHHHHHHHhCCCEEEEECCCcCC
Confidence 99875 599999999754
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=98.35 E-value=7.5e-07 Score=88.03 Aligned_cols=137 Identities=14% Similarity=0.092 Sum_probs=94.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC---hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN---PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~---~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
..+++|+|| |.+|+.++..|++.|. .+|.+++|+ .++++++.+++.. ...+.+...++++.+++.+.+
T Consensus 154 gk~~lVlGa-GG~g~aia~~L~~~Ga------~~V~i~nR~~~~~~~a~~la~~~~~--~~~~~~~~~~~~~~~~l~~~l 224 (315)
T 3tnl_A 154 GKKMTICGA-GGAATAICIQAALDGV------KEISIFNRKDDFYANAEKTVEKINS--KTDCKAQLFDIEDHEQLRKEI 224 (315)
T ss_dssp TSEEEEECC-SHHHHHHHHHHHHTTC------SEEEEEECSSTTHHHHHHHHHHHHH--HSSCEEEEEETTCHHHHHHHH
T ss_pred CCEEEEECC-ChHHHHHHHHHHHCCC------CEEEEEECCCchHHHHHHHHHHhhh--hcCCceEEeccchHHHHHhhh
Confidence 468999998 7999999999999982 289999999 8999888877642 112445667888888899999
Q ss_pred cCccEEeecCCCCCC-C--CHHH-HHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHH
Q 012947 87 SQTKLLLNCVGPYRL-H--GDPV-AAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMF 162 (452)
Q Consensus 87 ~~~dvVIn~aGp~~~-~--~~~v-v~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~ 162 (452)
.++|+|||+...... . ..++ .......+...+|+...+.-+. +-+.|++.|+.++++. +|.++-
T Consensus 225 ~~aDiIINaTp~Gm~~~~~~~p~~~~~~l~~~~~V~DlvY~P~~T~-----ll~~A~~~G~~~~~Gl-------~MLv~Q 292 (315)
T 3tnl_A 225 AESVIFTNATGVGMKPFEGETLLPSADMLRPELIVSDVVYKPTKTR-----LLEIAEEQGCQTLNGL-------GMMLWQ 292 (315)
T ss_dssp HTCSEEEECSSTTSTTSTTCCSCCCGGGCCTTCEEEESCCSSSSCH-----HHHHHHHTTCEEECSH-------HHHHHH
T ss_pred cCCCEEEECccCCCCCCCCCCCCCcHHHcCCCCEEEEeccCCCCCH-----HHHHHHHCCCeEeCcH-------HHHHHH
Confidence 999999999742211 1 1122 2223344555789987654322 2355777898887653 455555
Q ss_pred Hhhhc
Q 012947 163 NSRQW 167 (452)
Q Consensus 163 ~~~~~ 167 (452)
+...+
T Consensus 293 a~~af 297 (315)
T 3tnl_A 293 GAKAF 297 (315)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 54443
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=98.34 E-value=5.5e-08 Score=96.57 Aligned_cols=81 Identities=12% Similarity=0.062 Sum_probs=57.3
Q ss_pred CeEEEEcCCc--hHHHHHHHHHHHcCCCCCCCceEEEEEecCh---------hHHHHHHHHhCC--CCCCCccEEEEeCC
Q 012947 11 FDVIILGASG--FTGKYVVREALKLFNFPSSPIKSLALAGRNP---------TRVKQALQWASP--SHSLSIPILTADTT 77 (452)
Q Consensus 11 ~~ilV~GATG--~iG~~va~~L~~~g~~~~~~~~~v~iagR~~---------~kl~~l~~~l~~--~~~~~v~~v~~Dl~ 77 (452)
..++||||++ +||+.++++|+++| ++|++.+|+. ++++...+.... .....+.++.+|++
T Consensus 3 k~~lITGas~~~GIG~aiA~~la~~G-------~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~ 75 (329)
T 3lt0_A 3 DICFIAGIGDTNGYGWGIAKELSKRN-------VKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDAS 75 (329)
T ss_dssp CEEEEECCSSSSSHHHHHHHHHHHTT-------CEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTT
T ss_pred cEEEEECCCCCCchHHHHHHHHHHCC-------CEEEEEecCccccccccchHHHHHHHHHHHhhccccccccccccccc
Confidence 4799999975 99999999999998 8999666554 444333322221 01123567888988
Q ss_pred CH--H------------------HHHHHHc-------CccEEeecCCC
Q 012947 78 DP--P------------------SLHRLCS-------QTKLLLNCVGP 98 (452)
Q Consensus 78 d~--~------------------sl~~~~~-------~~dvVIn~aGp 98 (452)
+. + +++++++ +.|+||||||.
T Consensus 76 ~~~~~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi 123 (329)
T 3lt0_A 76 FDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLAN 123 (329)
T ss_dssp CSSGGGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCC
T ss_pred ccchhhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcc
Confidence 77 6 6666654 57999999995
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.34 E-value=1.9e-06 Score=74.31 Aligned_cols=89 Identities=16% Similarity=0.113 Sum_probs=70.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-HcCc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~-~~~~ 89 (452)
.+++|+|+ |.+|+.+++.|.+.| ++|.+.+|++++++.+.+. ...++.+|.+|++.++++ ++++
T Consensus 7 ~~v~I~G~-G~iG~~la~~L~~~g-------~~V~~id~~~~~~~~~~~~-------~~~~~~gd~~~~~~l~~~~~~~~ 71 (141)
T 3llv_A 7 YEYIVIGS-EAAGVGLVRELTAAG-------KKVLAVDKSKEKIELLEDE-------GFDAVIADPTDESFYRSLDLEGV 71 (141)
T ss_dssp CSEEEECC-SHHHHHHHHHHHHTT-------CCEEEEESCHHHHHHHHHT-------TCEEEECCTTCHHHHHHSCCTTC
T ss_pred CEEEEECC-CHHHHHHHHHHHHCC-------CeEEEEECCHHHHHHHHHC-------CCcEEECCCCCHHHHHhCCcccC
Confidence 47999998 899999999999998 7999999999998777652 457889999999999886 5689
Q ss_pred cEEeecCCCCCCCCHHHHHHHHHhCC
Q 012947 90 KLLLNCVGPYRLHGDPVAAACVHSGC 115 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~~~g~ 115 (452)
|+||.+.+.. .....+...+.+.+.
T Consensus 72 d~vi~~~~~~-~~n~~~~~~a~~~~~ 96 (141)
T 3llv_A 72 SAVLITGSDD-EFNLKILKALRSVSD 96 (141)
T ss_dssp SEEEECCSCH-HHHHHHHHHHHHHCC
T ss_pred CEEEEecCCH-HHHHHHHHHHHHhCC
Confidence 9999998722 122345555555554
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.32 E-value=3.1e-06 Score=72.14 Aligned_cols=91 Identities=14% Similarity=0.112 Sum_probs=69.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-HcC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQ 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~-~~~ 88 (452)
.++|+|+|+ |++|+.+++.|.+.+ ++|.+++|++++++.+.+.. .+.++.+|..+++.+.+. +++
T Consensus 4 ~m~i~IiG~-G~iG~~~a~~L~~~g-------~~v~~~d~~~~~~~~~~~~~------~~~~~~~d~~~~~~l~~~~~~~ 69 (140)
T 1lss_A 4 GMYIIIAGI-GRVGYTLAKSLSEKG-------HDIVLIDIDKDICKKASAEI------DALVINGDCTKIKTLEDAGIED 69 (140)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHC------SSEEEESCTTSHHHHHHTTTTT
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCC-------CeEEEEECCHHHHHHHHHhc------CcEEEEcCCCCHHHHHHcCccc
Confidence 468999997 999999999999987 79999999999887776543 346778899998888765 678
Q ss_pred ccEEeecCCCCCCCCHHHHHHHHHhCC
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACVHSGC 115 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~~~g~ 115 (452)
+|+||.+++... ....+.+.+...+.
T Consensus 70 ~d~vi~~~~~~~-~~~~~~~~~~~~~~ 95 (140)
T 1lss_A 70 ADMYIAVTGKEE-VNLMSSLLAKSYGI 95 (140)
T ss_dssp CSEEEECCSCHH-HHHHHHHHHHHTTC
T ss_pred CCEEEEeeCCch-HHHHHHHHHHHcCC
Confidence 999999986431 12334555555554
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.30 E-value=1.3e-07 Score=108.42 Aligned_cols=83 Identities=13% Similarity=0.081 Sum_probs=67.0
Q ss_pred CCeEEEEcCCch-HHHHHHHHHHHcCCCCCCCceEEEEE-ecChhHHHHHHHHhCCC---CCCCccEEEEeCCCHHHHHH
Q 012947 10 LFDVIILGASGF-TGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWASPS---HSLSIPILTADTTDPPSLHR 84 (452)
Q Consensus 10 ~~~ilV~GATG~-iG~~va~~L~~~g~~~~~~~~~v~ia-gR~~~kl~~l~~~l~~~---~~~~v~~v~~Dl~d~~sl~~ 84 (452)
...+|||||+++ ||+++++.|+++| ++|+++ +|+.++++++.+++... ...++.++.+|++|.+++++
T Consensus 476 GKvALVTGASgGGIGrAIAr~LA~~G-------A~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVea 548 (1688)
T 2pff_A 476 DKYVLITGAGKGSIGAEVLQGLLQGG-------AKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEA 548 (1688)
T ss_dssp SCCEEECSCSSSSTHHHHHHHHHHHT-------CEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHH
T ss_pred CCEEEEECCChHHHHHHHHHHHHHCc-------CEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHH
Confidence 356999999998 9999999999999 789887 68887776666666321 12357788999999999988
Q ss_pred HHc-------------CccEEeecCCCC
Q 012947 85 LCS-------------QTKLLLNCVGPY 99 (452)
Q Consensus 85 ~~~-------------~~dvVIn~aGp~ 99 (452)
+++ +.|+||||||..
T Consensus 549 LVe~I~e~~~~~GfG~~IDILVNNAGI~ 576 (1688)
T 2pff_A 549 LIEFIYDTEKNGGLGWDLDAIIPFAAIP 576 (1688)
T ss_dssp HHHHHHSCTTSSSCCCCCCEEECCCCCC
T ss_pred HHHHHHHhccccccCCCCeEEEECCCcC
Confidence 764 479999999964
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=98.28 E-value=2.9e-07 Score=108.32 Aligned_cols=83 Identities=13% Similarity=0.092 Sum_probs=66.9
Q ss_pred CCeEEEEcCCch-HHHHHHHHHHHcCCCCCCCceEEEEE-ecChhHHHHHHHHh----CCCCCCCccEEEEeCCCHHHHH
Q 012947 10 LFDVIILGASGF-TGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWA----SPSHSLSIPILTADTTDPPSLH 83 (452)
Q Consensus 10 ~~~ilV~GATG~-iG~~va~~L~~~g~~~~~~~~~v~ia-gR~~~kl~~l~~~l----~~~~~~~v~~v~~Dl~d~~sl~ 83 (452)
...+|||||+++ ||+.+++.|++.| ++|+++ +|+.++++++.+++ .. ...++.++.+|++|.++++
T Consensus 675 gKvaLVTGASsGgIG~aIA~~La~~G-------A~Vvl~~~R~~~~l~~~~~eL~~~~~~-~g~~v~~v~~DVsd~~sV~ 746 (1887)
T 2uv8_A 675 DKYVLITGAGKGSIGAEVLQGLLQGG-------AKVVVTTSRFSKQVTDYYQSIYAKYGA-KGSTLIVVPFNQGSKQDVE 746 (1887)
T ss_dssp TCEEEEESCCSSSHHHHHHHHHHHTT-------CEEEEEESSCCHHHHHHHHHHHHHHCC-TTCEEEEEECCTTCHHHHH
T ss_pred CCEEEEECCCCcHHHHHHHHHHHHCC-------CEEEEEecCCHHHHHHHHHHHHHHhhc-CCCeEEEEEecCCCHHHHH
Confidence 357999999998 9999999999998 799988 68888776655444 21 1346788999999999998
Q ss_pred HHHc-------------CccEEeecCCCCC
Q 012947 84 RLCS-------------QTKLLLNCVGPYR 100 (452)
Q Consensus 84 ~~~~-------------~~dvVIn~aGp~~ 100 (452)
++++ +.|+||||||...
T Consensus 747 alv~~i~~~~~~~G~G~~LDiLVNNAGi~~ 776 (1887)
T 2uv8_A 747 ALIEFIYDTEKNGGLGWDLDAIIPFAAIPE 776 (1887)
T ss_dssp HHHHHHHSCTTTTSCCCCCSEEEECCCCCC
T ss_pred HHHHHHHHhccccccCCCCeEEEECCCcCC
Confidence 8774 4899999999653
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=98.26 E-value=7.9e-07 Score=95.58 Aligned_cols=109 Identities=13% Similarity=0.056 Sum_probs=68.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeC-CCHHHH-HHH---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADT-TDPPSL-HRL--- 85 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl-~d~~sl-~~~--- 85 (452)
..++||||+++||+.+++.|+++| ++|++.+|.. ++++.+++.. ...++..+.+|+ ++.+.+ +++
T Consensus 323 kvalVTGas~GIG~a~A~~la~~G-------a~Vv~~~~~~--~~~~~~~i~~-~g~~~~~~~~Dv~~~~~~~~~~~~~~ 392 (604)
T 2et6_A 323 KVVLITGAGAGLGKEYAKWFAKYG-------AKVVVNDFKD--ATKTVDEIKA-AGGEAWPDQHDVAKDSEAIIKNVIDK 392 (604)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTT-------CEEEEECSSC--CHHHHHHHHH-TTCEEEEECCCHHHHHHHHHHHHHHH
T ss_pred CeEEEECcchHHHHHHHHHHHHCC-------CEEEEEeCcc--HHHHHHHHHh-cCCeEEEEEcChHHHHHHHHHHHHHh
Confidence 469999999999999999999999 8999988632 2223333311 123445566777 554433 222
Q ss_pred HcCccEEeecCCCCCC-----CCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHH
Q 012947 86 CSQTKLLLNCVGPYRL-----HGDPVAAACVHSGCDYLDISGEPEFMERMEARY 134 (452)
Q Consensus 86 ~~~~dvVIn~aGp~~~-----~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~ 134 (452)
+.+.|+||||||.... ....-++...+ |++.|....++...+.+
T Consensus 393 ~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~-----vNl~g~~~~~~~~~p~m 441 (604)
T 2et6_A 393 YGTIDILVNNAGILRDRSFAKMSKQEWDSVQQ-----VHLIGTFNLSRLAWPYF 441 (604)
T ss_dssp HSCCCEEEECCCCCCCBCTTTCCHHHHHHHHH-----HHTHHHHHHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHH-----HHhHHHHHHHHHHHHHH
Confidence 2368999999996432 22333444443 45666666677765544
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=98.25 E-value=3.1e-06 Score=84.11 Aligned_cols=140 Identities=11% Similarity=0.002 Sum_probs=84.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC----hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN----PTRVKQALQWASPSHSLSIPILTADTTDPPSLHR 84 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~----~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~ 84 (452)
++++|+|+||+|++|+.++..|+..+..+.....++++.+++ .++++....++.. ....+ ..|+....++.+
T Consensus 4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~---~~~~~-~~~i~~~~~~~~ 79 (329)
T 1b8p_A 4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDD---CAFPL-LAGMTAHADPMT 79 (329)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHT---TTCTT-EEEEEEESSHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhh---hcccc-cCcEEEecCcHH
Confidence 357999999999999999999988762000011379999999 7777665555531 11122 245555566888
Q ss_pred HHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHh
Q 012947 85 LCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNS 164 (452)
Q Consensus 85 ~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~ 164 (452)
+++++|+|||++|.....+..-.+.... ....++.+.....+.+ ...++++.. |-|.|+.++.+.
T Consensus 80 al~~aD~Vi~~ag~~~~~g~~r~dl~~~----------N~~i~~~i~~~i~~~~-~p~a~ii~~----SNPv~~~t~~~~ 144 (329)
T 1b8p_A 80 AFKDADVALLVGARPRGPGMERKDLLEA----------NAQIFTVQGKAIDAVA-SRNIKVLVV----GNPANTNAYIAM 144 (329)
T ss_dssp HTTTCSEEEECCCCCCCTTCCHHHHHHH----------HHHHHHHHHHHHHHHS-CTTCEEEEC----SSSHHHHHHHHH
T ss_pred HhCCCCEEEEeCCCCCCCCCCHHHHHHH----------HHHHHHHHHHHHHHhc-CCCeEEEEc----cCchHHHHHHHH
Confidence 9999999999999655444221111111 1222333333222221 023454433 468899999888
Q ss_pred hhc
Q 012947 165 RQW 167 (452)
Q Consensus 165 ~~~ 167 (452)
+..
T Consensus 145 ~~~ 147 (329)
T 1b8p_A 145 KSA 147 (329)
T ss_dssp HTC
T ss_pred HHc
Confidence 764
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=98.24 E-value=1.7e-06 Score=88.52 Aligned_cols=78 Identities=14% Similarity=0.023 Sum_probs=62.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHH-cCCCCCCCceEEEEEecChhHHH---------------HHHHHhCCCCCCCccEEE
Q 012947 10 LFDVIILGASGFTGKYVVREALK-LFNFPSSPIKSLALAGRNPTRVK---------------QALQWASPSHSLSIPILT 73 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~-~g~~~~~~~~~v~iagR~~~kl~---------------~l~~~l~~~~~~~v~~v~ 73 (452)
...+|||||+++||+++++.|++ .| ++|++++|+.+.++ +..++. ...+..+.
T Consensus 61 gKvaLVTGASsGIG~AiA~~LA~~~G-------A~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~----G~~a~~i~ 129 (422)
T 3s8m_A 61 PKKVLVIGASSGYGLASRITAAFGFG-------ADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAA----GLYSKSIN 129 (422)
T ss_dssp CSEEEEESCSSHHHHHHHHHHHHHHC-------CEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHT----TCCEEEEE
T ss_pred CCEEEEECCChHHHHHHHHHHHHhCC-------CEEEEEeCCchhhhhhhcccccchhHHHHHHHHhc----CCcEEEEE
Confidence 46799999999999999999999 98 89999999865432 222332 34677889
Q ss_pred EeCCCHHHHHHHHc--------CccEEeecCCC
Q 012947 74 ADTTDPPSLHRLCS--------QTKLLLNCVGP 98 (452)
Q Consensus 74 ~Dl~d~~sl~~~~~--------~~dvVIn~aGp 98 (452)
+|++|+++++++++ +.|+||||||.
T Consensus 130 ~Dvtd~~~v~~~v~~i~~~~~G~IDiLVNNAG~ 162 (422)
T 3s8m_A 130 GDAFSDAARAQVIELIKTEMGGQVDLVVYSLAS 162 (422)
T ss_dssp SCTTSHHHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred ecCCCHHHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence 99999998877764 57999999985
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=98.20 E-value=1e-06 Score=85.82 Aligned_cols=135 Identities=14% Similarity=0.114 Sum_probs=88.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+++|+|| |.+|+.++..|++.|. .+|.+++|+.++++++.+++.. ....+.+...+. +++.+.++++
T Consensus 127 ~k~vlVlGa-GG~g~aia~~L~~~G~------~~v~i~~R~~~~a~~la~~~~~-~~~~~~i~~~~~---~~l~~~l~~~ 195 (283)
T 3jyo_A 127 LDSVVQVGA-GGVGNAVAYALVTHGV------QKLQVADLDTSRAQALADVINN-AVGREAVVGVDA---RGIEDVIAAA 195 (283)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTC------SEEEEECSSHHHHHHHHHHHHH-HHTSCCEEEECS---TTHHHHHHHS
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCC------CEEEEEECCHHHHHHHHHHHHh-hcCCceEEEcCH---HHHHHHHhcC
Confidence 468999998 8899999999999982 3799999999999988877631 011344555554 3466778889
Q ss_pred cEEeecCCC--CCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhhc
Q 012947 90 KLLLNCVGP--YRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQW 167 (452)
Q Consensus 90 dvVIn~aGp--~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~~ 167 (452)
|+|||+... +.....++...++..+...+|+...+..+.- -+.|++.|+.++++. +|..+-+...+
T Consensus 196 DiVInaTp~Gm~~~~~~pi~~~~l~~~~~v~DlvY~P~~T~l-----l~~A~~~G~~~~~Gl-------~MLv~Qa~~~f 263 (283)
T 3jyo_A 196 DGVVNATPMGMPAHPGTAFDVSCLTKDHWVGDVVYMPIETEL-----LKAARALGCETLDGT-------RMAIHQAVDAF 263 (283)
T ss_dssp SEEEECSSTTSTTSCSCSSCGGGCCTTCEEEECCCSSSSCHH-----HHHHHHHTCCEECTH-------HHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCCCCCCCHHHhCCCCEEEEecCCCCCCHH-----HHHHHHCcCeEeCcH-------HHHHHHHHHHH
Confidence 999999742 2111122333344556667899886543322 244666787776553 45555555444
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=98.18 E-value=4.7e-06 Score=85.49 Aligned_cols=80 Identities=13% Similarity=0.001 Sum_probs=63.4
Q ss_pred CCCeEEEEcCCchHHHH--HHHHHHHcCCCCCCCceEEEEEecChh---------------HHHHHHHHhCCCCCCCccE
Q 012947 9 ELFDVIILGASGFTGKY--VVREALKLFNFPSSPIKSLALAGRNPT---------------RVKQALQWASPSHSLSIPI 71 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~--va~~L~~~g~~~~~~~~~v~iagR~~~---------------kl~~l~~~l~~~~~~~v~~ 71 (452)
....++||||+++||++ +++.|++.| ++|++++|+.+ .+++..++. ..++..
T Consensus 59 ~gK~aLVTGassGIG~A~aia~ala~~G-------a~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~----g~~~~~ 127 (418)
T 4eue_A 59 GPKKVLIVGASSGFGLATRISVAFGGPE-------AHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKK----GLVAKN 127 (418)
T ss_dssp CCSEEEEESCSSHHHHHHHHHHHHSSSC-------CEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHT----TCCEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHHhCC-------CEEEEEecCcchhhhcccccccchHHHHHHHHHHc----CCcEEE
Confidence 45689999999999999 999998888 89999999643 233333332 346788
Q ss_pred EEEeCCCHHHHHHHHc-------CccEEeecCCCC
Q 012947 72 LTADTTDPPSLHRLCS-------QTKLLLNCVGPY 99 (452)
Q Consensus 72 v~~Dl~d~~sl~~~~~-------~~dvVIn~aGp~ 99 (452)
+.+|++|+++++++++ +.|+||||||..
T Consensus 128 ~~~Dvtd~~~v~~~v~~i~~~~G~IDiLVnNAG~~ 162 (418)
T 4eue_A 128 FIEDAFSNETKDKVIKYIKDEFGKIDLFVYSLAAP 162 (418)
T ss_dssp EESCTTCHHHHHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred EEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCccc
Confidence 9999999999988776 579999999853
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=98.17 E-value=2.8e-06 Score=83.25 Aligned_cols=119 Identities=13% Similarity=0.135 Sum_probs=84.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+++|+|+ |.+|+.++..|++.|. .+|.+++|+.++++++.++++. ... .+ . +.+++.+.+.++
T Consensus 141 ~~~vlVlGa-Gg~g~aia~~L~~~G~------~~V~v~nR~~~ka~~la~~~~~--~~~-~~--~---~~~~~~~~~~~a 205 (297)
T 2egg_A 141 GKRILVIGA-GGGARGIYFSLLSTAA------ERIDMANRTVEKAERLVREGDE--RRS-AY--F---SLAEAETRLAEY 205 (297)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHTTTC------SEEEEECSSHHHHHHHHHHSCS--SSC-CE--E---CHHHHHHTGGGC
T ss_pred CCEEEEECc-HHHHHHHHHHHHHCCC------CEEEEEeCCHHHHHHHHHHhhh--ccC-ce--e---eHHHHHhhhccC
Confidence 468999998 7799999999999882 3899999999999999887742 000 11 1 335677888999
Q ss_pred cEEeecCCCCCCCC---HHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcC
Q 012947 90 KLLLNCVGPYRLHG---DPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSA 148 (452)
Q Consensus 90 dvVIn~aGp~~~~~---~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~ 148 (452)
|+||||++...... .++...++..+...+|+...+..+. +.+.|++.|+.++++
T Consensus 206 DivIn~t~~~~~~~~~~~~i~~~~l~~~~~v~D~~y~P~~T~-----ll~~A~~~G~~~v~G 262 (297)
T 2egg_A 206 DIIINTTSVGMHPRVEVQPLSLERLRPGVIVSDIIYNPLETK-----WLKEAKARGARVQNG 262 (297)
T ss_dssp SEEEECSCTTCSSCCSCCSSCCTTCCTTCEEEECCCSSSSCH-----HHHHHHHTTCEEECS
T ss_pred CEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEcCCCCCCCH-----HHHHHHHCcCEEECC
Confidence 99999987433110 1122344556788999988544322 345678889888766
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.16 E-value=1.1e-05 Score=70.58 Aligned_cols=90 Identities=11% Similarity=0.090 Sum_probs=69.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC-hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-HcC
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQ 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~-~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~-~~~ 88 (452)
.+++|+|+ |.+|+.+++.|.+.+ ++|.+++|+ .++.+.+.+... .++.++.+|.+|++.+.++ +++
T Consensus 4 ~~vlI~G~-G~vG~~la~~L~~~g-------~~V~vid~~~~~~~~~~~~~~~----~~~~~i~gd~~~~~~l~~a~i~~ 71 (153)
T 1id1_A 4 DHFIVCGH-SILAINTILQLNQRG-------QNVTVISNLPEDDIKQLEQRLG----DNADVIPGDSNDSSVLKKAGIDR 71 (153)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHTT-------CCEEEEECCCHHHHHHHHHHHC----TTCEEEESCTTSHHHHHHHTTTT
T ss_pred CcEEEECC-CHHHHHHHHHHHHCC-------CCEEEEECCChHHHHHHHHhhc----CCCeEEEcCCCCHHHHHHcChhh
Confidence 46999996 999999999999988 789999997 566666655442 3578999999999999887 899
Q ss_pred ccEEeecCCCCCCCCHHHHHHHHHh
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACVHS 113 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~~~ 113 (452)
+|+||.+.+... ....+...+.+.
T Consensus 72 ad~vi~~~~~d~-~n~~~~~~a~~~ 95 (153)
T 1id1_A 72 CRAILALSDNDA-DNAFVVLSAKDM 95 (153)
T ss_dssp CSEEEECSSCHH-HHHHHHHHHHHH
T ss_pred CCEEEEecCChH-HHHHHHHHHHHH
Confidence 999999986432 223455556554
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=8.3e-07 Score=87.35 Aligned_cols=35 Identities=17% Similarity=0.069 Sum_probs=31.4
Q ss_pred CCeEEEEcC--CchHHHHHHHHHHHcCCCCCCCceEEEEEecCh
Q 012947 10 LFDVIILGA--SGFTGKYVVREALKLFNFPSSPIKSLALAGRNP 51 (452)
Q Consensus 10 ~~~ilV~GA--TG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~ 51 (452)
...++|||| +++||+.+++.|+++| ++|++++|+.
T Consensus 9 gk~~lVTGa~~s~GIG~aia~~la~~G-------~~Vv~~~r~~ 45 (315)
T 2o2s_A 9 GQTAFVAGVADSHGYGWAIAKHLASAG-------ARVALGTWPP 45 (315)
T ss_dssp TCEEEEECCSSSSSHHHHHHHHHHTTT-------CEEEEEECHH
T ss_pred CCEEEEeCCCCCCChHHHHHHHHHHCC-------CEEEEEeccc
Confidence 357999999 8999999999999998 8999999864
|
| >1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A* | Back alignment and structure |
|---|
Probab=98.10 E-value=1.1e-06 Score=85.14 Aligned_cols=116 Identities=20% Similarity=0.242 Sum_probs=70.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEE-EEecChhHHH--HHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLA-LAGRNPTRVK--QALQWASPSHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~-iagR~~~kl~--~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
++++|.|+|++|.+|+.+++.+.+... ++++ +++|+.+++. .+.+..+. ....+.+ . ++++++
T Consensus 4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~------~elva~~d~~~~~~~g~d~~~~~g~-~~~~v~~-~------~dl~~~ 69 (273)
T 1dih_A 4 ANIRVAIAGAGGRMGRQLIQAALALEG------VQLGAALEREGSSLLGSDAGELAGA-GKTGVTV-Q------SSLDAV 69 (273)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHSTT------EECCCEECCTTCTTCSCCTTCSSSS-SCCSCCE-E------SCSTTT
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCC------CEEEEEEecCchhhhhhhHHHHcCC-CcCCcee-c------CCHHHH
Confidence 568999999999999999999886542 6765 5666654321 11000000 0011111 1 223455
Q ss_pred HcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEE-ecCcHHHHHHHHHHHHHHHHhCcc
Q 012947 86 CSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLD-ISGEPEFMERMEARYHEKAVETGS 143 (452)
Q Consensus 86 ~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvD-lsge~~~~~~~~~~~~~~A~~~gv 143 (452)
++++|+||+++.|... ..++++|+++|++.|- .+| |..+......+.+++.++
T Consensus 70 l~~~DvVIDft~p~~~--~~~~~~a~~~G~~vVigTtG---~~~e~~~~L~~~a~~~~v 123 (273)
T 1dih_A 70 KDDFDVFIDFTRPEGT--LNHLAFCRQHGKGMVIGTTG---FDEAGKQAIRDAAADIAI 123 (273)
T ss_dssp TTSCSEEEECSCHHHH--HHHHHHHHHTTCEEEECCCC---CCHHHHHHHHHHTTTSCE
T ss_pred hcCCCEEEEcCChHHH--HHHHHHHHhCCCCEEEECCC---CCHHHHHHHHHhcCCCCE
Confidence 5689999999866532 6789999999999665 333 333334555565655553
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=98.06 E-value=8.9e-06 Score=95.81 Aligned_cols=82 Identities=10% Similarity=0.079 Sum_probs=65.1
Q ss_pred CCeEEEEcCCch-HHHHHHHHHHHcCCCCCCCceEEEEEe-cChhHHHHHH----HHhCCCCCCCccEEEEeCCCHHHHH
Q 012947 10 LFDVIILGASGF-TGKYVVREALKLFNFPSSPIKSLALAG-RNPTRVKQAL----QWASPSHSLSIPILTADTTDPPSLH 83 (452)
Q Consensus 10 ~~~ilV~GATG~-iG~~va~~L~~~g~~~~~~~~~v~iag-R~~~kl~~l~----~~l~~~~~~~v~~v~~Dl~d~~sl~ 83 (452)
...+|||||+|+ ||+.+++.|+++| ++|++++ |+.+++++.. +++.. ...++.++.+|++|.++++
T Consensus 652 gKvaLVTGASgGgIG~aIAr~LA~~G-------A~VVl~~~R~~~~l~~~a~eL~~el~~-~G~~v~~v~~DVsd~esV~ 723 (1878)
T 2uv9_A 652 GKHALMTGAGAGSIGAEVLQGLLSGG-------AKVIVTTSRFSRQVTEYYQGIYARCGA-RGSQLVVVPFNQGSKQDVE 723 (1878)
T ss_dssp TCEEEEESCCTTSHHHHHHHHHHHTT-------CEEEEEESSCCHHHHHHHHHHHHHHCC-TTCEEEEEECCTTCHHHHH
T ss_pred CCEEEEECCCCcHHHHHHHHHHHHCC-------CEEEEEecCChHHHHHHHHHHHHHhhc-cCCeEEEEEcCCCCHHHHH
Confidence 357999999999 9999999999998 7899885 7777665444 33321 1346788999999999998
Q ss_pred HHHc-----------CccEEeecCCCC
Q 012947 84 RLCS-----------QTKLLLNCVGPY 99 (452)
Q Consensus 84 ~~~~-----------~~dvVIn~aGp~ 99 (452)
++++ +.|+||||||..
T Consensus 724 alv~~i~~~~~~~G~~IDiLVnNAGi~ 750 (1878)
T 2uv9_A 724 ALVNYIYDTKNGLGWDLDYVVPFAAIP 750 (1878)
T ss_dssp HHHHHHHCSSSSCCCCCSEEEECCCCC
T ss_pred HHHHHHHHhhcccCCCCcEEEeCcccc
Confidence 8874 479999999964
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=98.04 E-value=1.4e-06 Score=84.75 Aligned_cols=35 Identities=14% Similarity=0.008 Sum_probs=31.4
Q ss_pred CCeEEEEcCC--chHHHHHHHHHHHcCCCCCCCceEEEEEecCh
Q 012947 10 LFDVIILGAS--GFTGKYVVREALKLFNFPSSPIKSLALAGRNP 51 (452)
Q Consensus 10 ~~~ilV~GAT--G~iG~~va~~L~~~g~~~~~~~~~v~iagR~~ 51 (452)
...++||||+ |+||+++++.|+++| ++|++++|+.
T Consensus 8 ~k~~lVTGas~~~GIG~aia~~la~~G-------~~V~~~~r~~ 44 (297)
T 1d7o_A 8 GKRAFIAGIADDNGYGWAVAKSLAAAG-------AEILVGTWVP 44 (297)
T ss_dssp TCEEEEECCSSSSSHHHHHHHHHHHTT-------CEEEEEEEHH
T ss_pred CCEEEEECCCCCCChHHHHHHHHHHCC-------CeEEEeeccc
Confidence 3579999999 999999999999998 8999998763
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=98.04 E-value=1.9e-06 Score=84.89 Aligned_cols=34 Identities=9% Similarity=-0.096 Sum_probs=30.8
Q ss_pred CCeEEEEcC--CchHHHHHHHHHHHcCCCCCCCceEEEEEecC
Q 012947 10 LFDVIILGA--SGFTGKYVVREALKLFNFPSSPIKSLALAGRN 50 (452)
Q Consensus 10 ~~~ilV~GA--TG~iG~~va~~L~~~g~~~~~~~~~v~iagR~ 50 (452)
...++|||| +++||+.+++.|+++| ++|++.+|+
T Consensus 9 ~k~~lVTGa~~s~GIG~aia~~la~~G-------~~Vv~~~r~ 44 (319)
T 2ptg_A 9 GKTAFVAGVADSNGYGWAICKLLRAAG-------ARVLVGTWP 44 (319)
T ss_dssp TCEEEEECCCCTTSHHHHHHHHHHHTT-------CEEEEEECH
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHHHCC-------CEEEEEecc
Confidence 357999999 8999999999999998 899999875
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=98.03 E-value=6.4e-06 Score=81.23 Aligned_cols=137 Identities=12% Similarity=0.109 Sum_probs=90.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC---hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN---PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~---~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
..+++|+|| |.+|+.++..|++.|. .+|.++.|+ .++++++.+++.. .....+...+..+.+.+.+.+
T Consensus 148 gk~~lVlGA-GGaaraia~~L~~~G~------~~v~v~nRt~~~~~~a~~la~~~~~--~~~~~v~~~~~~~l~~~~~~l 218 (312)
T 3t4e_A 148 GKTMVLLGA-GGAATAIGAQAAIEGI------KEIKLFNRKDDFFEKAVAFAKRVNE--NTDCVVTVTDLADQHAFTEAL 218 (312)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTC------SEEEEEECSSTHHHHHHHHHHHHHH--HSSCEEEEEETTCHHHHHHHH
T ss_pred CCEEEEECc-CHHHHHHHHHHHHcCC------CEEEEEECCCchHHHHHHHHHHhhh--ccCcceEEechHhhhhhHhhc
Confidence 468999998 8899999999999982 389999999 8888888877631 112345566777765567778
Q ss_pred cCccEEeecCCCCC--CCCHHHH-H-HHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHH
Q 012947 87 SQTKLLLNCVGPYR--LHGDPVA-A-ACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMF 162 (452)
Q Consensus 87 ~~~dvVIn~aGp~~--~~~~~vv-~-ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~ 162 (452)
.++|+|||+.+... ....+++ + .+...+.-.+|+...+.-+. +-+.|++.|+.++++. +|.++-
T Consensus 219 ~~~DiIINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~P~~T~-----ll~~A~~~G~~~~~Gl-------~MLv~Q 286 (312)
T 3t4e_A 219 ASADILTNGTKVGMKPLENESLIGDVSLLRPELLVTECVYNPHMTK-----LLQQAQQAGCKTIDGY-------GMLLWQ 286 (312)
T ss_dssp HHCSEEEECSSTTSTTSTTCCSCCCGGGSCTTCEEEECCCSSSSCH-----HHHHHHHTTCEEECHH-------HHHHHH
T ss_pred cCceEEEECCcCCCCCCCCCcccCCHHHcCCCCEEEEeccCCCCCH-----HHHHHHHCCCeEECcH-------HHHHHH
Confidence 88999999974321 1112221 1 23334445679887654322 2345677888877553 455555
Q ss_pred Hhhhc
Q 012947 163 NSRQW 167 (452)
Q Consensus 163 ~~~~~ 167 (452)
+...+
T Consensus 287 a~~af 291 (312)
T 3t4e_A 287 GAEQF 291 (312)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 54444
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=97.98 E-value=1.4e-05 Score=70.21 Aligned_cols=92 Identities=11% Similarity=0.087 Sum_probs=67.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-Hc
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CS 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~-~~ 87 (452)
...+|+|+|+ |.+|+.+++.|.+.+ .+|.+++|++++++.+.+ .....++.+|..+++.+.++ ++
T Consensus 18 ~~~~v~IiG~-G~iG~~la~~L~~~g-------~~V~vid~~~~~~~~~~~------~~g~~~~~~d~~~~~~l~~~~~~ 83 (155)
T 2g1u_A 18 KSKYIVIFGC-GRLGSLIANLASSSG-------HSVVVVDKNEYAFHRLNS------EFSGFTVVGDAAEFETLKECGME 83 (155)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTT-------CEEEEEESCGGGGGGSCT------TCCSEEEESCTTSHHHHHTTTGG
T ss_pred CCCcEEEECC-CHHHHHHHHHHHhCC-------CeEEEEECCHHHHHHHHh------cCCCcEEEecCCCHHHHHHcCcc
Confidence 3568999997 999999999999988 799999999988754321 12456777888888888776 78
Q ss_pred CccEEeecCCCCCCCCHHHHHHHHH-hCC
Q 012947 88 QTKLLLNCVGPYRLHGDPVAAACVH-SGC 115 (452)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~ac~~-~g~ 115 (452)
++|+||.+++... ....+.+.+.. .+.
T Consensus 84 ~ad~Vi~~~~~~~-~~~~~~~~~~~~~~~ 111 (155)
T 2g1u_A 84 KADMVFAFTNDDS-TNFFISMNARYMFNV 111 (155)
T ss_dssp GCSEEEECSSCHH-HHHHHHHHHHHTSCC
T ss_pred cCCEEEEEeCCcH-HHHHHHHHHHHHCCC
Confidence 8999999987532 12344455554 444
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=97.98 E-value=4.9e-06 Score=80.34 Aligned_cols=117 Identities=15% Similarity=0.172 Sum_probs=78.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+++|+|+ |.+|+.+++.|++.| .+|.+++|+.++++++.++++. .. .+...|+ +++.+ .++
T Consensus 119 ~k~vlViGa-Gg~g~a~a~~L~~~G-------~~V~v~~R~~~~~~~la~~~~~--~~--~~~~~~~---~~~~~--~~~ 181 (271)
T 1nyt_A 119 GLRILLIGA-GGASRGVLLPLLSLD-------CAVTITNRTVSRAEELAKLFAH--TG--SIQALSM---DELEG--HEF 181 (271)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTT-------CEEEEECSSHHHHHHHHHHTGG--GS--SEEECCS---GGGTT--CCC
T ss_pred CCEEEEECC-cHHHHHHHHHHHHcC-------CEEEEEECCHHHHHHHHHHhhc--cC--CeeEecH---HHhcc--CCC
Confidence 458999998 779999999999998 7999999999999988887641 11 2222333 33322 689
Q ss_pred cEEeecCCCCCCCC-HHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccE-EEcC
Q 012947 90 KLLLNCVGPYRLHG-DPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSL-LVSA 148 (452)
Q Consensus 90 dvVIn~aGp~~~~~-~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~-iv~~ 148 (452)
|+||||+|...... .++-..+...+...+|+...+.-+ .+.+.+++.|+. ++++
T Consensus 182 DivVn~t~~~~~~~~~~i~~~~l~~~~~v~D~~y~p~~t-----~~~~~a~~~G~~~~~~G 237 (271)
T 1nyt_A 182 DLIINATSSGISGDIPAIPSSLIHPGIYCYDMFYQKGKT-----PFLAWCEQRGSKRNADG 237 (271)
T ss_dssp SEEEECCSCGGGTCCCCCCGGGCCTTCEEEESCCCSSCC-----HHHHHHHHTTCCEEECT
T ss_pred CEEEECCCCCCCCCCCCCCHHHcCCCCEEEEeccCCcCC-----HHHHHHHHcCCCeecCC
Confidence 99999998543210 011122334567889998764322 234567778876 6654
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=97.98 E-value=2.2e-05 Score=72.90 Aligned_cols=129 Identities=16% Similarity=0.108 Sum_probs=87.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-HcCc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~-~~~~ 89 (452)
|+|+|+|+ |.+|+.+++.|.+.+ ++|.+++|++++++++.+.. +..++.+|.+|++.++++ ++++
T Consensus 1 M~iiIiG~-G~~G~~la~~L~~~g-------~~v~vid~~~~~~~~l~~~~------~~~~i~gd~~~~~~l~~a~i~~a 66 (218)
T 3l4b_C 1 MKVIIIGG-ETTAYYLARSMLSRK-------YGVVIINKDRELCEEFAKKL------KATIIHGDGSHKEILRDAEVSKN 66 (218)
T ss_dssp CCEEEECC-HHHHHHHHHHHHHTT-------CCEEEEESCHHHHHHHHHHS------SSEEEESCTTSHHHHHHHTCCTT
T ss_pred CEEEEECC-CHHHHHHHHHHHhCC-------CeEEEEECCHHHHHHHHHHc------CCeEEEcCCCCHHHHHhcCcccC
Confidence 47999997 999999999999988 78999999999998876643 467899999999999887 7899
Q ss_pred cEEeecCCCCCCCCHHHHHHHHH-hCCcEEEe-cCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhhc
Q 012947 90 KLLLNCVGPYRLHGDPVAAACVH-SGCDYLDI-SGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQW 167 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~~-~g~~yvDl-sge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~~ 167 (452)
|+||.+.+.-. ....+...+.+ .+..++-. .......+ ..+..|+..+ -.|..+.+..+.+.+
T Consensus 67 d~vi~~~~~d~-~n~~~~~~a~~~~~~~~iia~~~~~~~~~--------~l~~~G~d~v------i~p~~~~~~~l~~~~ 131 (218)
T 3l4b_C 67 DVVVILTPRDE-VNLFIAQLVMKDFGVKRVVSLVNDPGNME--------IFKKMGITTV------LNLTTLITNTVEALI 131 (218)
T ss_dssp CEEEECCSCHH-HHHHHHHHHHHTSCCCEEEECCCSGGGHH--------HHHHHTCEEC------CCHHHHHHHHHHHHH
T ss_pred CEEEEecCCcH-HHHHHHHHHHHHcCCCeEEEEEeCcchHH--------HHHHCCCCEE------ECHHHHHHHHHHHHh
Confidence 99999885321 12334444444 45544333 22222211 1233455422 126666666666666
Q ss_pred C
Q 012947 168 I 168 (452)
Q Consensus 168 ~ 168 (452)
.
T Consensus 132 ~ 132 (218)
T 3l4b_C 132 F 132 (218)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=97.98 E-value=4.8e-05 Score=68.36 Aligned_cols=89 Identities=19% Similarity=0.137 Sum_probs=69.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHc-CCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH--H
Q 012947 10 LFDVIILGASGFTGKYVVREALKL-FNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL--C 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~-g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~--~ 86 (452)
..+|+|+|+ |.+|+.+++.|.+. + ++|.+++|++++.+.+.+ ..+.++.+|.+|++.+.++ +
T Consensus 39 ~~~v~IiG~-G~~G~~~a~~L~~~~g-------~~V~vid~~~~~~~~~~~-------~g~~~~~gd~~~~~~l~~~~~~ 103 (183)
T 3c85_A 39 HAQVLILGM-GRIGTGAYDELRARYG-------KISLGIEIREEAAQQHRS-------EGRNVISGDATDPDFWERILDT 103 (183)
T ss_dssp TCSEEEECC-SHHHHHHHHHHHHHHC-------SCEEEEESCHHHHHHHHH-------TTCCEEECCTTCHHHHHTBCSC
T ss_pred CCcEEEECC-CHHHHHHHHHHHhccC-------CeEEEEECCHHHHHHHHH-------CCCCEEEcCCCCHHHHHhccCC
Confidence 457999995 99999999999998 8 789999999999877654 2457788999999988887 8
Q ss_pred cCccEEeecCCCCCCCCHHHHHHHHHhC
Q 012947 87 SQTKLLLNCVGPYRLHGDPVAAACVHSG 114 (452)
Q Consensus 87 ~~~dvVIn~aGp~~~~~~~vv~ac~~~g 114 (452)
+++|+||.+.+... ....++..+...+
T Consensus 104 ~~ad~vi~~~~~~~-~~~~~~~~~~~~~ 130 (183)
T 3c85_A 104 GHVKLVLLAMPHHQ-GNQTALEQLQRRN 130 (183)
T ss_dssp CCCCEEEECCSSHH-HHHHHHHHHHHTT
T ss_pred CCCCEEEEeCCChH-HHHHHHHHHHHHC
Confidence 89999999886421 1234455555555
|
| >1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* | Back alignment and structure |
|---|
Probab=97.97 E-value=2e-05 Score=76.14 Aligned_cols=117 Identities=21% Similarity=0.206 Sum_probs=78.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+++|+|+ |.+|+.++..|++.| .+|.+++|+.++++++.+++.. .. .+...|+ +++.+ .++
T Consensus 119 ~~~vlvlGa-Gg~g~a~a~~L~~~G-------~~v~v~~R~~~~a~~l~~~~~~--~~--~~~~~~~---~~~~~--~~~ 181 (272)
T 1p77_A 119 NQHVLILGA-GGATKGVLLPLLQAQ-------QNIVLANRTFSKTKELAERFQP--YG--NIQAVSM---DSIPL--QTY 181 (272)
T ss_dssp TCEEEEECC-SHHHHTTHHHHHHTT-------CEEEEEESSHHHHHHHHHHHGG--GS--CEEEEEG---GGCCC--SCC
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHccc--cC--CeEEeeH---HHhcc--CCC
Confidence 468999998 789999999999998 7999999999999998887641 11 2223343 22211 489
Q ss_pred cEEeecCCCCCCCCH-HHHHHHHHhCCcEEEecCcHHH-HHHHHHHHHHHHHhCccE-EEcC
Q 012947 90 KLLLNCVGPYRLHGD-PVAAACVHSGCDYLDISGEPEF-MERMEARYHEKAVETGSL-LVSA 148 (452)
Q Consensus 90 dvVIn~aGp~~~~~~-~vv~ac~~~g~~yvDlsge~~~-~~~~~~~~~~~A~~~gv~-iv~~ 148 (452)
|+||||++....... ++-..+...+...+|+...+.. +. +.+.|++.|+. ++++
T Consensus 182 DivIn~t~~~~~~~~~~i~~~~l~~~~~v~D~~y~p~~~t~-----ll~~a~~~G~~~~v~G 238 (272)
T 1p77_A 182 DLVINATSAGLSGGTASVDAEILKLGSAFYDMQYAKGTDTP-----FIALCKSLGLTNVSDG 238 (272)
T ss_dssp SEEEECCCC-------CCCHHHHHHCSCEEESCCCTTSCCH-----HHHHHHHTTCCCEECS
T ss_pred CEEEECCCCCCCCCCCCCCHHHcCCCCEEEEeeCCCCcCCH-----HHHHHHHcCCCEeeCC
Confidence 999999975332111 1223456778889999875543 32 23557788887 7764
|
| >3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=97.95 E-value=8.6e-06 Score=79.28 Aligned_cols=129 Identities=19% Similarity=0.149 Sum_probs=74.5
Q ss_pred CCCCCCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEE-EEecChhH-H-HHHHHHhCCCCCCCccEEEEeCCCH
Q 012947 3 AQSQIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLA-LAGRNPTR-V-KQALQWASPSHSLSIPILTADTTDP 79 (452)
Q Consensus 3 ~~~~~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~-iagR~~~k-l-~~l~~~l~~~~~~~v~~v~~Dl~d~ 79 (452)
.+..|.++++|+|+||+|.+|+.+++.+.++.. ++++ +++|+.+. . +.+-+-.+. ....+. -.
T Consensus 14 ~~~~m~~~irV~V~Ga~GrMGr~i~~~v~~~~~------~eLvg~vd~~~~~~~G~d~gel~G~-~~~gv~-------v~ 79 (288)
T 3ijp_A 14 AQTQGPGSMRLTVVGANGRMGRELITAIQRRKD------VELCAVLVRKGSSFVDKDASILIGS-DFLGVR-------IT 79 (288)
T ss_dssp -------CEEEEESSTTSHHHHHHHHHHHTCSS------EEEEEEBCCTTCTTTTSBGGGGTTC-SCCSCB-------CB
T ss_pred hhhhccCCeEEEEECCCCHHHHHHHHHHHhCCC------CEEEEEEecCCccccccchHHhhcc-CcCCce-------ee
Confidence 455566789999999999999999999887642 6654 44665432 1 001110110 001111 11
Q ss_pred HHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCC
Q 012947 80 PSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGF 151 (452)
Q Consensus 80 ~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~ 151 (452)
.++++++.++|+||.+..|-. ....++.|+++|++.|--|. .|..+......+.+++ +.++-+..|
T Consensus 80 ~dl~~ll~~aDVvIDFT~p~a--~~~~~~~~l~~Gv~vViGTT--G~~~e~~~~L~~aa~~--~~~~~a~N~ 145 (288)
T 3ijp_A 80 DDPESAFSNTEGILDFSQPQA--SVLYANYAAQKSLIHIIGTT--GFSKTEEAQIADFAKY--TTIVKSGNM 145 (288)
T ss_dssp SCHHHHTTSCSEEEECSCHHH--HHHHHHHHHHHTCEEEECCC--CCCHHHHHHHHHHHTT--SEEEECSCC
T ss_pred CCHHHHhcCCCEEEEcCCHHH--HHHHHHHHHHcCCCEEEECC--CCCHHHHHHHHHHhCc--CCEEEECCC
Confidence 346677789999999885533 25678999999999875332 2444434556666665 344544455
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=97.94 E-value=1.8e-05 Score=97.72 Aligned_cols=81 Identities=14% Similarity=0.057 Sum_probs=68.0
Q ss_pred CCeEEEEcCCch-HHHHHHHHHHHcCCCCCCCceEEEEEecChhH-----HHHHHHHhCCCCCCCccEEEEeCCCHHHHH
Q 012947 10 LFDVIILGASGF-TGKYVVREALKLFNFPSSPIKSLALAGRNPTR-----VKQALQWASPSHSLSIPILTADTTDPPSLH 83 (452)
Q Consensus 10 ~~~ilV~GATG~-iG~~va~~L~~~g~~~~~~~~~v~iagR~~~k-----l~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~ 83 (452)
...+|||||+++ ||+.+++.|++.| .+|++++|+.++ ++++.+++.. ...++..+.+|++|+++++
T Consensus 2136 gKvaLVTGAs~GsIG~AiA~~La~~G-------A~Vvi~~r~~~~~~~~~~~~l~~~l~~-~G~~~~~v~~Dvtd~~~v~ 2207 (3089)
T 3zen_D 2136 DEVAVVTGASKGSIAASVVGQLLDGG-------ATVIATTSRLDDDRLAFYKQLYRDHAR-FDATLWVVPANMASYSDID 2207 (3089)
T ss_dssp CCEEEEESCCTTSHHHHHHHHHHHTT-------CEEEEEESCCSHHHHHHHHHHHHHHCC-TTCEEEEEECCTTCHHHHH
T ss_pred CCEEEEeCCChhHHHHHHHHHHHHCC-------CEEEEEeCChhhhhhHHHHHHHHHHhh-cCCeEEEEEecCCCHHHHH
Confidence 457999999999 9999999999999 899999998877 6777777752 2345678899999999998
Q ss_pred HHHc-----------CccEEeecCCC
Q 012947 84 RLCS-----------QTKLLLNCVGP 98 (452)
Q Consensus 84 ~~~~-----------~~dvVIn~aGp 98 (452)
++++ +.|+||||||.
T Consensus 2208 ~lv~~i~~~~~~~fG~IDILVNNAGi 2233 (3089)
T 3zen_D 2208 KLVEWVGTEQTESLGPQSIHLKDAQT 2233 (3089)
T ss_dssp HHHHHHTSCCEEEESSSEEEECCCCC
T ss_pred HHHHHHHhhhhhhcCCCCEEEECCCc
Confidence 8754 36999999996
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=97.93 E-value=0.00012 Score=72.55 Aligned_cols=85 Identities=18% Similarity=0.045 Sum_probs=57.0
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 8 ~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
.++++|+|+||+|++|..++..|+..+. ..+|.+.+++++ +....++.. ...... +.. +.+..++.++++
T Consensus 6 ~~~mKI~ViGAaG~VG~~la~~L~~~g~-----~~ev~l~Di~~~--~~~~~dL~~-~~~~~~-v~~-~~~t~d~~~al~ 75 (326)
T 1smk_A 6 APGFKVAILGAAGGIGQPLAMLMKMNPL-----VSVLHLYDVVNA--PGVTADISH-MDTGAV-VRG-FLGQQQLEAALT 75 (326)
T ss_dssp --CEEEEEETTTSTTHHHHHHHHHHCTT-----EEEEEEEESSSH--HHHHHHHHT-SCSSCE-EEE-EESHHHHHHHHT
T ss_pred CCCCEEEEECCCChHHHHHHHHHHhCCC-----CCEEEEEeCCCc--HhHHHHhhc-ccccce-EEE-EeCCCCHHHHcC
Confidence 3568999999999999999999988762 147888998776 222223321 011111 222 334567888999
Q ss_pred CccEEeecCCCCCCC
Q 012947 88 QTKLLLNCVGPYRLH 102 (452)
Q Consensus 88 ~~dvVIn~aGp~~~~ 102 (452)
++|+||+++|.....
T Consensus 76 gaDvVi~~ag~~~~~ 90 (326)
T 1smk_A 76 GMDLIIVPAGVPRKP 90 (326)
T ss_dssp TCSEEEECCCCCCCS
T ss_pred CCCEEEEcCCcCCCC
Confidence 999999999965443
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=97.93 E-value=6.6e-05 Score=73.97 Aligned_cols=130 Identities=15% Similarity=0.151 Sum_probs=77.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec--ChhHHHHHHHHhCC--CCC-CCccEEEEeCCCHHHHHHH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR--NPTRVKQALQWASP--SHS-LSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR--~~~kl~~l~~~l~~--~~~-~~v~~v~~Dl~d~~sl~~~ 85 (452)
++|+|+||+|++|+.++..|+..+. ..++++.++ +.++++....++.. +.. .++.+...| +++.++
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~-----~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~a 71 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPF-----MKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENLRI 71 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTT-----CCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGGG
T ss_pred CEEEEECCCChhHHHHHHHHHhCCC-----CCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHHH
Confidence 4799999999999999999998762 146888999 77666543333310 001 122332211 236677
Q ss_pred HcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhh
Q 012947 86 CSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSR 165 (452)
Q Consensus 86 ~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~ 165 (452)
++++|+|||+||.....+..-.+.... ....++.+.+...+.+ ..+++.. |-|.|+.++.+.+
T Consensus 72 l~gaD~Vi~~Ag~~~~~g~~r~dl~~~----------N~~i~~~i~~~i~~~~---~~~vlv~----SNPv~~~t~~~~k 134 (313)
T 1hye_A 72 IDESDVVIITSGVPRKEGMSRMDLAKT----------NAKIVGKYAKKIAEIC---DTKIFVI----TNPVDVMTYKALV 134 (313)
T ss_dssp GTTCSEEEECCSCCCCTTCCHHHHHHH----------HHHHHHHHHHHHHHHC---CCEEEEC----SSSHHHHHHHHHH
T ss_pred hCCCCEEEECCCCCCCCCCcHHHHHHH----------HHHHHHHHHHHHHHhC---CeEEEEe----cCcHHHHHHHHHH
Confidence 899999999999765554321111111 1223334433333332 3344433 4688999998877
Q ss_pred h
Q 012947 166 Q 166 (452)
Q Consensus 166 ~ 166 (452)
.
T Consensus 135 ~ 135 (313)
T 1hye_A 135 D 135 (313)
T ss_dssp H
T ss_pred h
Confidence 7
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=97.89 E-value=4e-06 Score=102.97 Aligned_cols=83 Identities=14% Similarity=0.083 Sum_probs=63.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceE-EEEEecChhHH---HHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKS-LALAGRNPTRV---KQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~-v~iagR~~~kl---~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
...++|+||+|+||+.+++.|+++| ++ |++.+|+..+. ++..+++.. ...++.++.+|++|.++++++
T Consensus 1884 ~k~~lITGgs~GIG~aia~~la~~G-------a~~vvl~~R~~~~~~~~~~~~~~l~~-~g~~v~~~~~Dvsd~~~v~~~ 1955 (2512)
T 2vz8_A 1884 HKSYVITGGLGGFGLQLAQWLRLRG-------AQKLVLTSRSGIRTGYQARQVREWRR-QGVQVLVSTSNASSLDGARSL 1955 (2512)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTT-------CCEEEEECSSCCCSHHHHHHHHHHHH-TTCEEEEECCCSSSHHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHHHCC-------CCEEEEEeCCCcchHHHHHHHHHHHh-CCCEEEEEecCCCCHHHHHHH
Confidence 3569999999999999999999998 55 88899986443 334444321 134677888999999999887
Q ss_pred Hc------CccEEeecCCCCC
Q 012947 86 CS------QTKLLLNCVGPYR 100 (452)
Q Consensus 86 ~~------~~dvVIn~aGp~~ 100 (452)
++ ..|+||||||...
T Consensus 1956 ~~~~~~~g~id~lVnnAgv~~ 1976 (2512)
T 2vz8_A 1956 ITEATQLGPVGGVFNLAMVLR 1976 (2512)
T ss_dssp HHHHHHHSCEEEEEECCCC--
T ss_pred HHHHHhcCCCcEEEECCCcCC
Confidence 75 5799999999653
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=97.85 E-value=8.1e-05 Score=64.14 Aligned_cols=73 Identities=14% Similarity=0.166 Sum_probs=62.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-HcCc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~-~~~~ 89 (452)
.+|+|+|+ |.+|+.+++.|.+.+ ++|.++++++++++.+.+ ..+.++.+|.++++.++++ ++++
T Consensus 8 ~~viIiG~-G~~G~~la~~L~~~g-------~~v~vid~~~~~~~~~~~-------~g~~~i~gd~~~~~~l~~a~i~~a 72 (140)
T 3fwz_A 8 NHALLVGY-GRVGSLLGEKLLASD-------IPLVVIETSRTRVDELRE-------RGVRAVLGNAANEEIMQLAHLECA 72 (140)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHTT-------CCEEEEESCHHHHHHHHH-------TTCEEEESCTTSHHHHHHTTGGGC
T ss_pred CCEEEECc-CHHHHHHHHHHHHCC-------CCEEEEECCHHHHHHHHH-------cCCCEEECCCCCHHHHHhcCcccC
Confidence 46999997 999999999999988 799999999999887664 2567889999999998875 6789
Q ss_pred cEEeecCCC
Q 012947 90 KLLLNCVGP 98 (452)
Q Consensus 90 dvVIn~aGp 98 (452)
|+||.+.+.
T Consensus 73 d~vi~~~~~ 81 (140)
T 3fwz_A 73 KWLILTIPN 81 (140)
T ss_dssp SEEEECCSC
T ss_pred CEEEEECCC
Confidence 999998853
|
| >4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=97.85 E-value=1.7e-05 Score=76.61 Aligned_cols=124 Identities=18% Similarity=0.181 Sum_probs=75.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEE-EecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLAL-AGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~i-agR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
.++|.|+||+|.+|+.+++.+.++.. ++++. ++|+.+... -++.+. ...... ++.-.+++++++++
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~~~------~eLv~~~d~~~~~~~--G~d~ge--l~g~~~---gv~v~~dl~~ll~~ 73 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAAPD------ATLVGALDRTGSPQL--GQDAGA--FLGKQT---GVALTDDIERVCAE 73 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHCTT------EEEEEEBCCTTCTTT--TSBTTT--TTTCCC---SCBCBCCHHHHHHH
T ss_pred ccEEEEECCCCHHHHHHHHHHHhCCC------CEEEEEEEecCcccc--cccHHH--HhCCCC---CceecCCHHHHhcC
Confidence 47899999999999999999988752 66654 577643210 000000 000000 11112345666678
Q ss_pred ccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCC
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFD 152 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~ 152 (452)
+|+||.+..|-. ....++.|+++|++.|--| ..|..+......+.+++ +.++.+..|.
T Consensus 74 ~DVVIDfT~p~a--~~~~~~~al~~G~~vVigT--TG~s~~~~~~L~~aa~~--~~vv~a~N~s 131 (272)
T 4f3y_A 74 ADYLIDFTLPEG--TLVHLDAALRHDVKLVIGT--TGFSEPQKAQLRAAGEK--IALVFSANMS 131 (272)
T ss_dssp CSEEEECSCHHH--HHHHHHHHHHHTCEEEECC--CCCCHHHHHHHHHHTTT--SEEEECSCCC
T ss_pred CCEEEEcCCHHH--HHHHHHHHHHcCCCEEEEC--CCCCHHHHHHHHHHhcc--CCEEEECCCC
Confidence 999999985532 2568899999999977533 22444444556666665 3445555663
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=97.77 E-value=0.00019 Score=70.28 Aligned_cols=127 Identities=11% Similarity=0.029 Sum_probs=76.1
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec--ChhHHHHHHHHhCC--CCCCCccEEEEeCCCHHHHHHHH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR--NPTRVKQALQWASP--SHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR--~~~kl~~l~~~l~~--~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
++|+|+||+|++|+.++..|+..+. ..++.+.++ +.++++....++.. ....++.+.. + + .+.+
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~-----~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~----~~a~ 68 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDI-----ADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--G----YEDT 68 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-----CSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--C----GGGG
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-----CCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--C----HHHh
Confidence 4899999999999999999988762 136899999 88777654444421 0112333332 2 2 4458
Q ss_pred cCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhC--ccEEEcCCCCCcchhhHHHHHHh
Q 012947 87 SQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVET--GSLLVSACGFDSIPAELGVMFNS 164 (452)
Q Consensus 87 ~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~--gv~iv~~~G~~s~P~dl~~~~~~ 164 (452)
+++|+|||++|.....++.-.+.... ....++.+. +.+++. ..+++.. +-|-|+.++.+.
T Consensus 69 ~~aDvVi~~ag~~~~~g~~r~dl~~~----------N~~i~~~i~----~~i~~~~p~~~viv~----SNPv~~~~~~~~ 130 (303)
T 1o6z_A 69 AGSDVVVITAGIPRQPGQTRIDLAGD----------NAPIMEDIQ----SSLDEHNDDYISLTT----SNPVDLLNRHLY 130 (303)
T ss_dssp TTCSEEEECCCCCCCTTCCHHHHHHH----------HHHHHHHHH----HHHHTTCSCCEEEEC----CSSHHHHHHHHH
T ss_pred CCCCEEEEcCCCCCCCCCCHHHHHHH----------HHHHHHHHH----HHHHHHCCCcEEEEe----CChHHHHHHHHH
Confidence 89999999999655444321111100 011222222 222222 3444432 578899998887
Q ss_pred hhc
Q 012947 165 RQW 167 (452)
Q Consensus 165 ~~~ 167 (452)
+.-
T Consensus 131 ~~~ 133 (303)
T 1o6z_A 131 EAG 133 (303)
T ss_dssp HHS
T ss_pred HHc
Confidence 774
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=97.77 E-value=3e-05 Score=75.01 Aligned_cols=130 Identities=14% Similarity=0.092 Sum_probs=83.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
+..+++|+|+ |.+|+.++..|++.|. .+|.+++|+.++.+++.+++.. ..+...+.++ +.. .+
T Consensus 119 ~~k~~lvlGa-Gg~~~aia~~L~~~G~------~~v~i~~R~~~~a~~la~~~~~-----~~~~~~~~~~---l~~--~~ 181 (272)
T 3pwz_A 119 RNRRVLLLGA-GGAVRGALLPFLQAGP------SELVIANRDMAKALALRNELDH-----SRLRISRYEA---LEG--QS 181 (272)
T ss_dssp TTSEEEEECC-SHHHHHHHHHHHHTCC------SEEEEECSCHHHHHHHHHHHCC-----TTEEEECSGG---GTT--CC
T ss_pred cCCEEEEECc-cHHHHHHHHHHHHcCC------CEEEEEeCCHHHHHHHHHHhcc-----CCeeEeeHHH---hcc--cC
Confidence 3468999998 7899999999999882 3899999999999999988741 1233334433 222 68
Q ss_pred ccEEeecCCCCCCCC-HHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccE-EEcCCCCCcchhhHHHHHHhhh
Q 012947 89 TKLLLNCVGPYRLHG-DPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSL-LVSACGFDSIPAELGVMFNSRQ 166 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~-~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~-iv~~~G~~s~P~dl~~~~~~~~ 166 (452)
+|+|||+........ .++-...+..+...+|+...+..+.- -+.|++.|+. ++++. +|..+-+...
T Consensus 182 ~DivInaTp~gm~~~~~~i~~~~l~~~~~V~DlvY~P~~T~l-----l~~A~~~G~~~~~~Gl-------~ML~~Qa~~~ 249 (272)
T 3pwz_A 182 FDIVVNATSASLTADLPPLPADVLGEAALAYELAYGKGLTPF-----LRLAREQGQARLADGV-------GMLVEQAAEA 249 (272)
T ss_dssp CSEEEECSSGGGGTCCCCCCGGGGTTCSEEEESSCSCCSCHH-----HHHHHHHSCCEEECTH-------HHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCCCCCCHHHhCcCCEEEEeecCCCCCHH-----HHHHHHCCCCEEECCH-------HHHHHHHHHH
Confidence 999999974321110 11222344556678899876543322 2456777876 66543 4555544444
Q ss_pred c
Q 012947 167 W 167 (452)
Q Consensus 167 ~ 167 (452)
+
T Consensus 250 f 250 (272)
T 3pwz_A 250 F 250 (272)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=97.77 E-value=4.9e-05 Score=72.41 Aligned_cols=103 Identities=17% Similarity=0.183 Sum_probs=75.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh-------------------hHHHHHHHHhCC-CCCCCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-------------------TRVKQALQWASP-SHSLSI 69 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~-------------------~kl~~l~~~l~~-~~~~~v 69 (452)
..+|+|+|+ |.+|..++++|++.|. -++.+++++. .|.+.+.+.+.. ....++
T Consensus 31 ~~~VlVvG~-Gg~G~~va~~La~~Gv------~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v 103 (249)
T 1jw9_B 31 DSRVLIVGL-GGLGCAASQYLASAGV------GNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAI 103 (249)
T ss_dssp HCEEEEECC-SHHHHHHHHHHHHHTC------SEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEE
T ss_pred CCeEEEEee-CHHHHHHHHHHHHcCC------CeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEE
Confidence 457999998 7899999999999983 4899999987 787777665532 011223
Q ss_pred cEEEEeCCCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEec
Q 012947 70 PILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 70 ~~v~~Dl~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDls 121 (452)
..+..+++ ++.+.+.++++|+||++..... ....+.++|.+.++.+|+..
T Consensus 104 ~~~~~~~~-~~~~~~~~~~~DvVi~~~d~~~-~~~~l~~~~~~~~~p~i~~~ 153 (249)
T 1jw9_B 104 TPVNALLD-DAELAALIAEHDLVLDCTDNVA-VRNQLNAGCFAAKVPLVSGA 153 (249)
T ss_dssp EEECSCCC-HHHHHHHHHTSSEEEECCSSHH-HHHHHHHHHHHHTCCEEEEE
T ss_pred EEEeccCC-HhHHHHHHhCCCEEEEeCCCHH-HHHHHHHHHHHcCCCEEEee
Confidence 33344454 4677888999999999986432 23567889999999888864
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.76 E-value=6.9e-05 Score=75.52 Aligned_cols=75 Identities=19% Similarity=0.198 Sum_probs=63.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
+..+++|+|+ |.+|+.+++.+...| .+|.+.+|+.++++.+.+.++ . . +.+|..+.+++++++++
T Consensus 165 ~~~~V~ViGa-G~iG~~~a~~l~~~G-------a~V~~~d~~~~~~~~~~~~~g----~--~-~~~~~~~~~~l~~~~~~ 229 (369)
T 2eez_A 165 APASVVILGG-GTVGTNAAKIALGMG-------AQVTILDVNHKRLQYLDDVFG----G--R-VITLTATEANIKKSVQH 229 (369)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHTT----T--S-EEEEECCHHHHHHHHHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCC-------CEEEEEECCHHHHHHHHHhcC----c--e-EEEecCCHHHHHHHHhC
Confidence 3578999999 999999999999998 799999999999887766553 1 2 45677888999999999
Q ss_pred ccEEeecCCC
Q 012947 89 TKLLLNCVGP 98 (452)
Q Consensus 89 ~dvVIn~aGp 98 (452)
+|+||+|+|.
T Consensus 230 ~DvVi~~~g~ 239 (369)
T 2eez_A 230 ADLLIGAVLV 239 (369)
T ss_dssp CSEEEECCC-
T ss_pred CCEEEECCCC
Confidence 9999999974
|
| >3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* | Back alignment and structure |
|---|
Probab=97.75 E-value=0.00015 Score=69.83 Aligned_cols=121 Identities=14% Similarity=0.066 Sum_probs=83.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+++|+|+ |.+|+.++..|++.| .+|.++.|+.++.+++. +++ +. ..+.++ + .++
T Consensus 118 ~k~vlvlGa-GGaaraia~~L~~~G-------~~v~V~nRt~~ka~~la-~~~------~~--~~~~~~---l----~~~ 173 (269)
T 3phh_A 118 YQNALILGA-GGSAKALACELKKQG-------LQVSVLNRSSRGLDFFQ-RLG------CD--CFMEPP---K----SAF 173 (269)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTT-------CEEEEECSSCTTHHHHH-HHT------CE--EESSCC---S----SCC
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHH-HCC------Ce--EecHHH---h----ccC
Confidence 458999997 899999999999998 69999999999999888 663 22 223333 1 289
Q ss_pred cEEeecCCCCC----CCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhh
Q 012947 90 KLLLNCVGPYR----LHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSR 165 (452)
Q Consensus 90 dvVIn~aGp~~----~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~ 165 (452)
|+||||..... ......+......+.-.+|+...+ -+. +-+.|++.|+.++++. +|..+-+..
T Consensus 174 DiVInaTp~Gm~~~~~l~~~~l~~~l~~~~~v~D~vY~P-~T~-----ll~~A~~~G~~~~~Gl-------~MLv~Qa~~ 240 (269)
T 3phh_A 174 DLIINATSASLHNELPLNKEVLKGYFKEGKLAYDLAYGF-LTP-----FLSLAKELKTPFQDGK-------DMLIYQAAL 240 (269)
T ss_dssp SEEEECCTTCCCCSCSSCHHHHHHHHHHCSEEEESCCSS-CCH-----HHHHHHHTTCCEECSH-------HHHHHHHHH
T ss_pred CEEEEcccCCCCCCCCCChHHHHhhCCCCCEEEEeCCCC-chH-----HHHHHHHCcCEEECCH-------HHHHHHHHH
Confidence 99999964221 122334444667788889998876 333 3456788888777553 455554444
Q ss_pred hc
Q 012947 166 QW 167 (452)
Q Consensus 166 ~~ 167 (452)
.+
T Consensus 241 ~f 242 (269)
T 3phh_A 241 SF 242 (269)
T ss_dssp HH
T ss_pred HH
Confidence 44
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=97.74 E-value=1.4e-05 Score=69.28 Aligned_cols=91 Identities=12% Similarity=0.168 Sum_probs=65.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+|+|+|+ |.+|+.+++.|.+.+ .++.+.+|+.++.+++.++++ ..+. +.+ ++.++++++
T Consensus 21 ~~~v~iiG~-G~iG~~~a~~l~~~g-------~~v~v~~r~~~~~~~~a~~~~------~~~~--~~~---~~~~~~~~~ 81 (144)
T 3oj0_A 21 GNKILLVGN-GMLASEIAPYFSYPQ-------YKVTVAGRNIDHVRAFAEKYE------YEYV--LIN---DIDSLIKNN 81 (144)
T ss_dssp CCEEEEECC-SHHHHHHGGGCCTTT-------CEEEEEESCHHHHHHHHHHHT------CEEE--ECS---CHHHHHHTC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCC-------CEEEEEcCCHHHHHHHHHHhC------CceE--eec---CHHHHhcCC
Confidence 458999997 999999999998876 679999999999988888763 2222 233 356678899
Q ss_pred cEEeecCCCCCCCCHHHHHHHHHhCCcEEEecC
Q 012947 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISG 122 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsg 122 (452)
|+||++.+..... +...+++.+.+++|++-
T Consensus 82 Divi~at~~~~~~---~~~~~l~~g~~vid~~~ 111 (144)
T 3oj0_A 82 DVIITATSSKTPI---VEERSLMPGKLFIDLGN 111 (144)
T ss_dssp SEEEECSCCSSCS---BCGGGCCTTCEEEECCS
T ss_pred CEEEEeCCCCCcE---eeHHHcCCCCEEEEccC
Confidence 9999998743221 11133445777777753
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=97.71 E-value=3.9e-05 Score=70.57 Aligned_cols=74 Identities=14% Similarity=0.086 Sum_probs=53.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
++|.|+||+|++|+.+++.|++.+ ++|.+.+|+.++.+++.+.++. .+. ..|+. ..++.++++++|
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g-------~~V~~~~r~~~~~~~~~~~~~~----~~~--~~~~~-~~~~~~~~~~~D 66 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLG-------HEIVVGSRREEKAEAKAAEYRR----IAG--DASIT-GMKNEDAAEACD 66 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT-------CEEEEEESSHHHHHHHHHHHHH----HHS--SCCEE-EEEHHHHHHHCS
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhcc----ccc--cCCCC-hhhHHHHHhcCC
Confidence 479999999999999999999987 7999999999988776654310 000 00111 124566678899
Q ss_pred EEeecCCC
Q 012947 91 LLLNCVGP 98 (452)
Q Consensus 91 vVIn~aGp 98 (452)
+||+|+.+
T Consensus 67 ~Vi~~~~~ 74 (212)
T 1jay_A 67 IAVLTIPW 74 (212)
T ss_dssp EEEECSCH
T ss_pred EEEEeCCh
Confidence 99999853
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=97.71 E-value=0.00012 Score=66.49 Aligned_cols=74 Identities=14% Similarity=0.086 Sum_probs=55.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH---H
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL---C 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~---~ 86 (452)
..+++|+||+|.+|+.+++.+...| .+|++.+|++++++.+. +++ .. ...|.++.+..+.+ .
T Consensus 39 g~~vlV~Ga~ggiG~~~~~~~~~~G-------~~V~~~~~~~~~~~~~~-~~g------~~-~~~d~~~~~~~~~~~~~~ 103 (198)
T 1pqw_A 39 GERVLIHSATGGVGMAAVSIAKMIG-------ARIYTTAGSDAKREMLS-RLG------VE-YVGDSRSVDFADEILELT 103 (198)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHHT-------CEEEEEESSHHHHHHHH-TTC------CS-EEEETTCSTHHHHHHHHT
T ss_pred CCEEEEeeCCChHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHH-HcC------CC-EEeeCCcHHHHHHHHHHh
Confidence 4579999999999999999999888 79999999998876553 332 12 23577765443333 3
Q ss_pred c--CccEEeecCCC
Q 012947 87 S--QTKLLLNCVGP 98 (452)
Q Consensus 87 ~--~~dvVIn~aGp 98 (452)
. ++|+||||+|+
T Consensus 104 ~~~~~D~vi~~~g~ 117 (198)
T 1pqw_A 104 DGYGVDVVLNSLAG 117 (198)
T ss_dssp TTCCEEEEEECCCT
T ss_pred CCCCCeEEEECCch
Confidence 2 58999999973
|
| >3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* | Back alignment and structure |
|---|
Probab=97.70 E-value=9.8e-05 Score=72.01 Aligned_cols=105 Identities=17% Similarity=0.266 Sum_probs=75.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh------------------hHHHHHHHHhCC-CCCCCc
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP------------------TRVKQALQWASP-SHSLSI 69 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~------------------~kl~~l~~~l~~-~~~~~v 69 (452)
+..+|+|+|+ |.+|..++++|++.|. -++.+++++. .|.+.+.+.+.. ....++
T Consensus 35 ~~~~VlVvGa-GGlGs~va~~La~aGV------G~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v 107 (292)
T 3h8v_A 35 RTFAVAIVGV-GGVGSVTAEMLTRCGI------GKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLF 107 (292)
T ss_dssp GGCEEEEECC-SHHHHHHHHHHHHHTC------SEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEE
T ss_pred hCCeEEEECc-CHHHHHHHHHHHHcCC------CEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEE
Confidence 3568999998 7799999999999984 5888888765 565555554432 112344
Q ss_pred cEEEEeCCCHHHHHHHH-----------cCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEec
Q 012947 70 PILTADTTDPPSLHRLC-----------SQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 70 ~~v~~Dl~d~~sl~~~~-----------~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDls 121 (452)
..+..++++.+.+++++ ++.|+||+|...+.. ...+.++|.+.++.+|+..
T Consensus 108 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn~~~-R~~in~~c~~~~~Pli~~g 169 (292)
T 3h8v_A 108 EVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEA-RMTINTACNELGQTWMESG 169 (292)
T ss_dssp EEECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCSSHHH-HHHHHHHHHHHTCCEEEEE
T ss_pred EEecccCCcHHHHHHHhhhhcccccccCCCCCEEEECCcchhh-hhHHHHHHHHhCCCEEEee
Confidence 45555677667777665 689999999865432 2568899999999988763
|
| >3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=97.69 E-value=4.5e-05 Score=74.12 Aligned_cols=124 Identities=19% Similarity=0.205 Sum_probs=82.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+++|+|+ |.+|+.++..|.+.|. .+|.++.|+.++.+++.+++ .. .++ +++.+ + ++
T Consensus 122 ~k~vlvlGa-GGaaraia~~L~~~G~------~~v~v~nRt~~ka~~La~~~--------~~--~~~---~~l~~-l-~~ 179 (282)
T 3fbt_A 122 NNICVVLGS-GGAARAVLQYLKDNFA------KDIYVVTRNPEKTSEIYGEF--------KV--ISY---DELSN-L-KG 179 (282)
T ss_dssp TSEEEEECS-STTHHHHHHHHHHTTC------SEEEEEESCHHHHHHHCTTS--------EE--EEH---HHHTT-C-CC
T ss_pred CCEEEEECC-cHHHHHHHHHHHHcCC------CEEEEEeCCHHHHHHHHHhc--------Cc--ccH---HHHHh-c-cC
Confidence 468999998 7889999999999882 38999999999988776532 21 222 34444 4 89
Q ss_pred cEEeecCCC--CCCC-CHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhh
Q 012947 90 KLLLNCVGP--YRLH-GDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQ 166 (452)
Q Consensus 90 dvVIn~aGp--~~~~-~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~ 166 (452)
|+|||+... +... ..++...++..+...+|+...+.-+. +-+.|++.|+.++++. +|.++-+...
T Consensus 180 DivInaTp~Gm~~~~~~~pi~~~~l~~~~~v~DlvY~P~~T~-----ll~~A~~~G~~~~~Gl-------~MLv~Qa~~~ 247 (282)
T 3fbt_A 180 DVIINCTPKGMYPKEGESPVDKEVVAKFSSAVDLIYNPVETL-----FLKYARESGVKAVNGL-------YMLVSQAAAS 247 (282)
T ss_dssp SEEEECSSTTSTTSTTCCSSCHHHHTTCSEEEESCCSSSSCH-----HHHHHHHTTCEEECSH-------HHHHHHHHHH
T ss_pred CEEEECCccCccCCCccCCCCHHHcCCCCEEEEEeeCCCCCH-----HHHHHHHCcCeEeCcH-------HHHHHHHHHH
Confidence 999999743 2111 12344555666777889987554322 2345777898877553 4566655555
Q ss_pred c
Q 012947 167 W 167 (452)
Q Consensus 167 ~ 167 (452)
+
T Consensus 248 f 248 (282)
T 3fbt_A 248 E 248 (282)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=97.64 E-value=0.00019 Score=72.37 Aligned_cols=79 Identities=13% Similarity=0.047 Sum_probs=61.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHH-HcCCCCCCCceEEEEEecChhH---------------HHHHHHHhCCCCCCCccEE
Q 012947 9 ELFDVIILGASGFTGKYVVREAL-KLFNFPSSPIKSLALAGRNPTR---------------VKQALQWASPSHSLSIPIL 72 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~-~~g~~~~~~~~~v~iagR~~~k---------------l~~l~~~l~~~~~~~v~~v 72 (452)
.+.++||+||++++|++++..|+ +.+ ..++++.|..+. ..+..++. ......+
T Consensus 49 ~pK~vLVtGaSsGiGlA~AialAf~~G-------A~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~----G~~a~~i 117 (401)
T 4ggo_A 49 APKNVLVLGCSNGYGLASRITAAFGYG-------AATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKRE----GLYSVTI 117 (401)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHHHC-------CEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHH----TCCEEEE
T ss_pred CCCEEEEECCCCcHHHHHHHHHHhhCC-------CCEEEEecCCcccccccccccchhHHHHHHHHHHc----CCCceeE
Confidence 46899999999999999999998 566 678877775431 22233333 3577899
Q ss_pred EEeCCCHHHHHHHHc-------CccEEeecCCC
Q 012947 73 TADTTDPPSLHRLCS-------QTKLLLNCVGP 98 (452)
Q Consensus 73 ~~Dl~d~~sl~~~~~-------~~dvVIn~aGp 98 (452)
.+|+.|+++++++++ +.|+|||+++.
T Consensus 118 ~~Dv~d~e~i~~vi~~i~~~~G~IDiLVhS~A~ 150 (401)
T 4ggo_A 118 DGDAFSDEIKAQVIEEAKKKGIKFDLIVYSLAS 150 (401)
T ss_dssp ESCTTSHHHHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred eCCCCCHHHHHHHHHHHHHhcCCCCEEEEeccc
Confidence 999999999988876 57999999984
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=97.56 E-value=3.4e-05 Score=74.92 Aligned_cols=129 Identities=12% Similarity=0.114 Sum_probs=80.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+++|+|+ |.+|+.++..|++.|. .+|.+++|+.++.+++.+++.. ... +...+..+ + ..++
T Consensus 126 ~k~vlvlGa-Gg~g~aia~~L~~~G~------~~v~v~~R~~~~a~~la~~~~~--~~~--~~~~~~~~---l---~~~a 188 (281)
T 3o8q_A 126 GATILLIGA-GGAARGVLKPLLDQQP------ASITVTNRTFAKAEQLAELVAA--YGE--VKAQAFEQ---L---KQSY 188 (281)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHTTCC------SEEEEEESSHHHHHHHHHHHGG--GSC--EEEEEGGG---C---CSCE
T ss_pred CCEEEEECc-hHHHHHHHHHHHhcCC------CeEEEEECCHHHHHHHHHHhhc--cCC--eeEeeHHH---h---cCCC
Confidence 468999998 7899999999999882 3899999999999999888742 112 22333322 2 2689
Q ss_pred cEEeecCCCCCCCCHH-HHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccE-EEcCCCCCcchhhHHHHHHhhhc
Q 012947 90 KLLLNCVGPYRLHGDP-VAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSL-LVSACGFDSIPAELGVMFNSRQW 167 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~-vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~-iv~~~G~~s~P~dl~~~~~~~~~ 167 (452)
|+|||+.+.......+ +-...+..+...+|+...+..+.. -+.|++.|+. ++++. +|..+-+...+
T Consensus 189 DiIInaTp~gm~~~~~~l~~~~l~~~~~V~DlvY~P~~T~l-----l~~A~~~G~~~~~~Gl-------~Mlv~Qa~~~f 256 (281)
T 3o8q_A 189 DVIINSTSASLDGELPAIDPVIFSSRSVCYDMMYGKGYTVF-----NQWARQHGCAQAIDGL-------GMLVGQAAESF 256 (281)
T ss_dssp EEEEECSCCCC----CSCCGGGEEEEEEEEESCCCSSCCHH-----HHHHHHTTCSEEECTH-------HHHHHHHHHHH
T ss_pred CEEEEcCcCCCCCCCCCCCHHHhCcCCEEEEecCCCccCHH-----HHHHHHCCCCEEECcH-------HHHHHHHHHHH
Confidence 9999997432111011 111223345567899876533322 2457778876 66543 45555555444
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=97.54 E-value=0.0002 Score=70.58 Aligned_cols=73 Identities=15% Similarity=0.018 Sum_probs=55.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..+++|+||+|.+|..+++.+...| .+|++++|+.++++.+ ++++. . ..+|.++.+++.+.+.
T Consensus 146 g~~vlV~Ga~ggiG~~~~~~~~~~G-------~~V~~~~~~~~~~~~~-~~~g~------~-~~~d~~~~~~~~~~~~~~ 210 (333)
T 1v3u_A 146 GETVLVSAAAGAVGSVVGQIAKLKG-------CKVVGAAGSDEKIAYL-KQIGF------D-AAFNYKTVNSLEEALKKA 210 (333)
T ss_dssp SCEEEEESTTBHHHHHHHHHHHHTT-------CEEEEEESSHHHHHHH-HHTTC------S-EEEETTSCSCHHHHHHHH
T ss_pred CCEEEEecCCCcHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHH-HhcCC------c-EEEecCCHHHHHHHHHHH
Confidence 4579999999999999999999888 7999999999998776 55531 2 3457776333333332
Q ss_pred ---CccEEeecCC
Q 012947 88 ---QTKLLLNCVG 97 (452)
Q Consensus 88 ---~~dvVIn~aG 97 (452)
+.|+||||+|
T Consensus 211 ~~~~~d~vi~~~g 223 (333)
T 1v3u_A 211 SPDGYDCYFDNVG 223 (333)
T ss_dssp CTTCEEEEEESSC
T ss_pred hCCCCeEEEECCC
Confidence 5899999998
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00025 Score=70.48 Aligned_cols=137 Identities=15% Similarity=0.105 Sum_probs=79.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~--~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
.+++|+|+||+|++|+.++..|+..+..+......+.+.++++ ++++....++.. ....+. .++.......+.+
T Consensus 2 ~~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~---~~~~~~-~~~~~~~~~~~~~ 77 (333)
T 5mdh_A 2 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQD---CALPLL-KDVIATDKEEIAF 77 (333)
T ss_dssp CCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHH---TCCTTE-EEEEEESCHHHHT
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHh---hhhccc-CCEEEcCCcHHHh
Confidence 3579999999999999999999876531100114599999974 466666655531 111111 1222223457779
Q ss_pred cCccEEeecCCCCCCCCH---HHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHH
Q 012947 87 SQTKLLLNCVGPYRLHGD---PVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFN 163 (452)
Q Consensus 87 ~~~dvVIn~aGp~~~~~~---~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~ 163 (452)
+++|+||+++|.....|+ .+++.. ...++.+.....+.+ ..+++++.. +-|-|+.++.+
T Consensus 78 ~daDvVvitAg~prkpG~tR~dll~~N-------------~~i~~~i~~~i~~~~-~~~~~vivv----sNPvd~~t~~~ 139 (333)
T 5mdh_A 78 KDLDVAILVGSMPRRDGMERKDLLKAN-------------VKIFKCQGAALDKYA-KKSVKVIVV----GNPANTNCLTA 139 (333)
T ss_dssp TTCSEEEECCSCCCCTTCCTTTTHHHH-------------HHHHHHHHHHHHHHS-CTTCEEEEC----SSSHHHHHHHH
T ss_pred CCCCEEEEeCCCCCCCCCCHHHHHHHH-------------HHHHHHHHHHHHHhC-CCCeEEEEc----CCchHHHHHHH
Confidence 999999999996544331 112211 122333333222222 134433322 36889999998
Q ss_pred hhhc
Q 012947 164 SRQW 167 (452)
Q Consensus 164 ~~~~ 167 (452)
.+..
T Consensus 140 ~~~~ 143 (333)
T 5mdh_A 140 SKSA 143 (333)
T ss_dssp HHTC
T ss_pred HHHc
Confidence 8854
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=97.52 E-value=9.9e-06 Score=78.57 Aligned_cols=125 Identities=17% Similarity=0.148 Sum_probs=80.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCce-EEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIK-SLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~-~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
..+++|+|+ |.+|+.++..|++.| . +|.++.|+.++.+++.+ .+..+ ..+++.+.+++
T Consensus 117 ~k~vlvlGa-Gg~g~aia~~L~~~G-------~~~v~v~~R~~~~a~~la~--------~~~~~-----~~~~~~~~~~~ 175 (277)
T 3don_A 117 DAYILILGA-GGASKGIANELYKIV-------RPTLTVANRTMSRFNNWSL--------NINKI-----NLSHAESHLDE 175 (277)
T ss_dssp GCCEEEECC-SHHHHHHHHHHHTTC-------CSCCEEECSCGGGGTTCCS--------CCEEE-----CHHHHHHTGGG
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCC-------CCEEEEEeCCHHHHHHHHH--------hcccc-----cHhhHHHHhcC
Confidence 457999998 789999999999988 4 89999999998755432 11211 24567777889
Q ss_pred ccEEeecCCCCC--CCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhh
Q 012947 89 TKLLLNCVGPYR--LHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQ 166 (452)
Q Consensus 89 ~dvVIn~aGp~~--~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~ 166 (452)
+|+|||+..... ....++-......+...+|+...+.-+ .+-+.|++.|+.++++. +|..+-+...
T Consensus 176 aDiVInaTp~Gm~~~~~~~l~~~~l~~~~~V~D~vY~P~~T-----~ll~~A~~~G~~~~~Gl-------~MLv~Qa~~~ 243 (277)
T 3don_A 176 FDIIINTTPAGMNGNTDSVISLNRLASHTLVSDIVYNPYKT-----PILIEAEQRGNPIYNGL-------DMFVHQGAES 243 (277)
T ss_dssp CSEEEECCC-------CCSSCCTTCCSSCEEEESCCSSSSC-----HHHHHHHHTTCCEECTH-------HHHHHHHHHH
T ss_pred CCEEEECccCCCCCCCcCCCCHHHcCCCCEEEEecCCCCCC-----HHHHHHHHCcCEEeCCH-------HHHHHHHHHH
Confidence 999999974211 111111112233455688998765432 23456778888776553 4555555554
Q ss_pred c
Q 012947 167 W 167 (452)
Q Consensus 167 ~ 167 (452)
+
T Consensus 244 f 244 (277)
T 3don_A 244 F 244 (277)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=97.50 E-value=6.2e-05 Score=71.97 Aligned_cols=110 Identities=19% Similarity=0.121 Sum_probs=73.2
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCccE
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKL 91 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~dv 91 (452)
+++|+|+ |.+|+.++..|++.|. .++.+++|+.++++++.+++ .. .+ .+++.+.++++|+
T Consensus 110 ~vliiGa-Gg~a~ai~~~L~~~G~------~~I~v~nR~~~ka~~la~~~--------~~--~~---~~~~~~~~~~aDi 169 (253)
T 3u62_A 110 PVVVVGA-GGAARAVIYALLQMGV------KDIWVVNRTIERAKALDFPV--------KI--FS---LDQLDEVVKKAKS 169 (253)
T ss_dssp SEEEECC-SHHHHHHHHHHHHTTC------CCEEEEESCHHHHHTCCSSC--------EE--EE---GGGHHHHHHTCSE
T ss_pred eEEEECc-HHHHHHHHHHHHHcCC------CEEEEEeCCHHHHHHHHHHc--------cc--CC---HHHHHhhhcCCCE
Confidence 8999998 8899999999999882 38999999999887654432 11 12 2456778889999
Q ss_pred EeecCCCCC-CCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccE-EEcC
Q 012947 92 LLNCVGPYR-LHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSL-LVSA 148 (452)
Q Consensus 92 VIn~aGp~~-~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~-iv~~ 148 (452)
|||+..... ....++-...+..+...+|+... -+ .+-+.|++.|+. ++++
T Consensus 170 VInatp~gm~p~~~~i~~~~l~~~~~V~Divy~--~T-----~ll~~A~~~G~~~~~~G 221 (253)
T 3u62_A 170 LFNTTSVGMKGEELPVSDDSLKNLSLVYDVIYF--DT-----PLVVKARKLGVKHIIKG 221 (253)
T ss_dssp EEECSSTTTTSCCCSCCHHHHTTCSEEEECSSS--CC-----HHHHHHHHHTCSEEECT
T ss_pred EEECCCCCCCCCCCCCCHHHhCcCCEEEEeeCC--Cc-----HHHHHHHHCCCcEEECC
Confidence 999874211 11122323455667778999875 11 122445556766 5544
|
| >1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A | Back alignment and structure |
|---|
Probab=97.48 E-value=3.3e-05 Score=77.65 Aligned_cols=100 Identities=14% Similarity=0.102 Sum_probs=64.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
.++|.|.||||++|+.+++.|.++.. .+++.+.+..+..+++.+.... ....+ ..|+.-.+ ++.++++
T Consensus 16 ~~kV~IiGAtG~iG~~llr~L~~~p~------~elvai~~~~~~g~~~~~~~~~-~~~~v---~~dl~~~~--~~~~~~v 83 (359)
T 1xyg_A 16 DIRIGLLGASGYTGAEIVRLLANHPH------FQVTLMTADRKAGQSMESVFPH-LRAQK---LPTLVSVK--DADFSTV 83 (359)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHTCSS------EEEEEEBCSTTTTSCHHHHCGG-GTTSC---CCCCBCGG--GCCGGGC
T ss_pred CcEEEEECcCCHHHHHHHHHHHcCCC------cEEEEEeCchhcCCCHHHhCch-hcCcc---cccceecc--hhHhcCC
Confidence 47899999999999999999998752 6776665443221122211110 00111 12332222 3345689
Q ss_pred cEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcH
Q 012947 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEP 124 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~ 124 (452)
|+||.|+|... ....+..+ +.|++.||+++..
T Consensus 84 DvVf~atp~~~--s~~~a~~~-~aG~~VId~sa~~ 115 (359)
T 1xyg_A 84 DAVFCCLPHGT--TQEIIKEL-PTALKIVDLSADF 115 (359)
T ss_dssp SEEEECCCTTT--HHHHHHTS-CTTCEEEECSSTT
T ss_pred CEEEEcCCchh--HHHHHHHH-hCCCEEEECCccc
Confidence 99999997543 35677888 8899999999864
|
| >2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A | Back alignment and structure |
|---|
Probab=97.48 E-value=6.2e-05 Score=72.70 Aligned_cols=111 Identities=16% Similarity=0.134 Sum_probs=75.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+++|+|+ |.+|+.++..|.+.+ .+|.+++|+.++++++.+++ . +...+ ++.++++++
T Consensus 129 ~~~v~iiGa-G~~g~aia~~L~~~g-------~~V~v~~r~~~~~~~l~~~~------g--~~~~~-----~~~~~~~~a 187 (275)
T 2hk9_A 129 EKSILVLGA-GGASRAVIYALVKEG-------AKVFLWNRTKEKAIKLAQKF------P--LEVVN-----SPEEVIDKV 187 (275)
T ss_dssp GSEEEEECC-SHHHHHHHHHHHHHT-------CEEEEECSSHHHHHHHTTTS------C--EEECS-----CGGGTGGGC
T ss_pred CCEEEEECc-hHHHHHHHHHHHHcC-------CEEEEEECCHHHHHHHHHHc------C--Ceeeh-----hHHhhhcCC
Confidence 468999997 889999999999998 68999999999987766533 1 11111 345567899
Q ss_pred cEEeecCCCCCCC--CHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcC
Q 012947 90 KLLLNCVGPYRLH--GDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSA 148 (452)
Q Consensus 90 dvVIn~aGp~~~~--~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~ 148 (452)
|+||+|+.+.... ...+-..++..+...+|+.. .. ..+.+.+++.|+.++++
T Consensus 188 DiVi~atp~~~~~~~~~~i~~~~l~~g~~viDv~~---~~----t~ll~~a~~~g~~~v~g 241 (275)
T 2hk9_A 188 QVIVNTTSVGLKDEDPEIFNYDLIKKDHVVVDIIY---KE----TKLLKKAKEKGAKLLDG 241 (275)
T ss_dssp SEEEECSSTTSSTTCCCSSCGGGCCTTSEEEESSS---SC----CHHHHHHHHTTCEEECS
T ss_pred CEEEEeCCCCCCCCCCCCCCHHHcCCCCEEEEcCC---Ch----HHHHHHHHHCcCEEECC
Confidence 9999999764321 11121233456778899987 11 11234566678877754
|
| >1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=97.47 E-value=8.8e-05 Score=71.62 Aligned_cols=124 Identities=18% Similarity=0.116 Sum_probs=84.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+++|+|+ |..|+.++..|.+.|. .++.++.|+.++.+++.++++ ..+ .+ + +. +.++
T Consensus 119 ~~~vlvlGa-Ggaarav~~~L~~~G~------~~i~v~nRt~~ka~~la~~~~------~~~--~~--~---~~--~~~~ 176 (271)
T 1npy_A 119 NAKVIVHGS-GGMAKAVVAAFKNSGF------EKLKIYARNVKTGQYLAALYG------YAY--IN--S---LE--NQQA 176 (271)
T ss_dssp TSCEEEECS-STTHHHHHHHHHHTTC------CCEEEECSCHHHHHHHHHHHT------CEE--ES--C---CT--TCCC
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCC------CEEEEEeCCHHHHHHHHHHcC------Ccc--ch--h---hh--cccC
Confidence 357999997 7889999999999882 379999999999999988773 111 11 1 11 3689
Q ss_pred cEEeecCCCCCCC-----CHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHh
Q 012947 90 KLLLNCVGPYRLH-----GDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNS 164 (452)
Q Consensus 90 dvVIn~aGp~~~~-----~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~ 164 (452)
|+|||+....... ..++-..++..+...+|+...+.-+ .+.+.|++.|+.++++. +|..+-+.
T Consensus 177 DivInaTp~gm~~~~~~~~~~~~~~~l~~~~~v~DlvY~P~~T-----~ll~~A~~~G~~~i~Gl-------~MLv~Qa~ 244 (271)
T 1npy_A 177 DILVNVTSIGMKGGKEEMDLAFPKAFIDNASVAFDVVAMPVET-----PFIRYAQARGKQTISGA-------AVIVLQAV 244 (271)
T ss_dssp SEEEECSSTTCTTSTTTTSCSSCHHHHHHCSEEEECCCSSSSC-----HHHHHHHHTTCEEECHH-------HHHHHHHH
T ss_pred CEEEECCCCCccCccccCCCCCCHHHcCCCCEEEEeecCCCCC-----HHHHHHHHCCCEEECCH-------HHHHHHHH
Confidence 9999997533211 1123346677788899998855432 23456788898887554 35555555
Q ss_pred hhc
Q 012947 165 RQW 167 (452)
Q Consensus 165 ~~~ 167 (452)
+.+
T Consensus 245 ~~f 247 (271)
T 1npy_A 245 EQF 247 (271)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00023 Score=66.58 Aligned_cols=89 Identities=13% Similarity=0.015 Sum_probs=69.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-HcC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQ 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~-~~~ 88 (452)
..+++|+|+ |.+|+.+++.|.+.+ + |.++.|++++++.+. . ++.++.+|.+|++.++++ +++
T Consensus 9 ~~~viI~G~-G~~G~~la~~L~~~g-------~-v~vid~~~~~~~~~~--~------~~~~i~gd~~~~~~l~~a~i~~ 71 (234)
T 2aef_A 9 SRHVVICGW-SESTLECLRELRGSE-------V-FVLAEDENVRKKVLR--S------GANFVHGDPTRVSDLEKANVRG 71 (234)
T ss_dssp -CEEEEESC-CHHHHHHHHHSTTSE-------E-EEEESCGGGHHHHHH--T------TCEEEESCTTCHHHHHHTTCTT
T ss_pred CCEEEEECC-ChHHHHHHHHHHhCC-------e-EEEEECCHHHHHHHh--c------CCeEEEcCCCCHHHHHhcCcch
Confidence 457999998 999999999998877 8 999999999886654 2 468899999999999887 889
Q ss_pred ccEEeecCCCCCCCCHHHHHHHHHhCCc
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACVHSGCD 116 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~~~g~~ 116 (452)
+|+||.+.+.- .....+...|.+.+.+
T Consensus 72 ad~vi~~~~~d-~~n~~~~~~a~~~~~~ 98 (234)
T 2aef_A 72 ARAVIVDLESD-SETIHCILGIRKIDES 98 (234)
T ss_dssp CSEEEECCSCH-HHHHHHHHHHHHHCSS
T ss_pred hcEEEEcCCCc-HHHHHHHHHHHHHCCC
Confidence 99999987532 1223455666666654
|
| >1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=97.46 E-value=6.1e-05 Score=73.15 Aligned_cols=121 Identities=12% Similarity=0.078 Sum_probs=76.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+++|+||+ .+|+.+++.|++.| +|.+++|+.++++++.+++........ .+.+|+.| +.+.+.++
T Consensus 128 ~k~vlV~GaG-giG~aia~~L~~~G--------~V~v~~r~~~~~~~l~~~~~~~~~~~~-~~~~d~~~---~~~~~~~~ 194 (287)
T 1nvt_A 128 DKNIVIYGAG-GAARAVAFELAKDN--------NIIIANRTVEKAEALAKEIAEKLNKKF-GEEVKFSG---LDVDLDGV 194 (287)
T ss_dssp SCEEEEECCS-HHHHHHHHHHTSSS--------EEEEECSSHHHHHHHHHHHHHHHTCCH-HHHEEEEC---TTCCCTTC
T ss_pred CCEEEEECch-HHHHHHHHHHHHCC--------CEEEEECCHHHHHHHHHHHhhhccccc-ceeEEEee---HHHhhCCC
Confidence 3579999996 99999999998764 788999999998888776531000010 11234333 13456689
Q ss_pred cEEeecCCCCCCCC---HHH-HHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcC
Q 012947 90 KLLLNCVGPYRLHG---DPV-AAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSA 148 (452)
Q Consensus 90 dvVIn~aGp~~~~~---~~v-v~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~ 148 (452)
|+||||+|...... .++ ...++..+...+|+...+..+. +.+.+++.|+.++++
T Consensus 195 DilVn~ag~~~~~~~~~~~~~~~~~l~~~~~v~Dv~y~p~~t~-----ll~~a~~~G~~~~~G 252 (287)
T 1nvt_A 195 DIIINATPIGMYPNIDVEPIVKAEKLREDMVVMDLIYNPLETV-----LLKEAKKVNAKTING 252 (287)
T ss_dssp CEEEECSCTTCTTCCSSCCSSCSTTCCSSSEEEECCCSSSSCH-----HHHHHHTTTCEEECT
T ss_pred CEEEECCCCCCCCCCCCCCCCCHHHcCCCCEEEEeeeCCccCH-----HHHHHHHCCCEEeCc
Confidence 99999998543210 112 1234445667899987543221 234677888877654
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00021 Score=71.26 Aligned_cols=132 Identities=11% Similarity=0.091 Sum_probs=76.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+|.|+||+|++|+.++..++..+.. .++++.++++++++....++.........+.. ..+..+.++++
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~-----~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~-----t~d~~~al~dA 77 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLT-----PNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF-----TSDIKEALTDA 77 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCC-----SCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE-----ESCHHHHHTTE
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCC-----CEEEEEeCCchhHHHHHHhhhhCcCCCCceEE-----cCCHHHHhCCC
Confidence 468999999999999999999988731 37999999999887765555310001111111 12356778999
Q ss_pred cEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCcc-EEEcCCCCCcchhhHHHHHHhhhc
Q 012947 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGS-LLVSACGFDSIPAELGVMFNSRQW 167 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv-~iv~~~G~~s~P~dl~~~~~~~~~ 167 (452)
|+||.++|.....|+.-.+.... ....++.+.....+.+. .++ .++- +-|-|+.++.+.+.-
T Consensus 78 DvVvitaG~p~kpG~~R~dLl~~----------N~~I~~~i~~~i~~~~p-~a~~vlvv-----sNPvd~~t~i~~k~s 140 (343)
T 3fi9_A 78 KYIVSSGGAPRKEGMTREDLLKG----------NAEIAAQLGKDIKSYCP-DCKHVIII-----FNPADITGLVTLIYS 140 (343)
T ss_dssp EEEEECCC-------CHHHHHHH----------HHHHHHHHHHHHHHHCT-TCCEEEEC-----SSSHHHHHHHHHHHH
T ss_pred CEEEEccCCCCCCCCCHHHHHHH----------HHHHHHHHHHHHHHhcc-CcEEEEEe-----cCchHHHHHHHHHHc
Confidence 99999999654444211111111 11233444343333332 333 3332 468899999887654
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00044 Score=70.75 Aligned_cols=91 Identities=15% Similarity=0.173 Sum_probs=72.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-HcC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQ 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~-~~~ 88 (452)
+.+|+|+|. |.+|+.+++.|.+.+ .+|+++++++++++.+.+ ..+.++.+|.++++.|+++ +++
T Consensus 4 ~~~viIiG~-Gr~G~~va~~L~~~g-------~~vvvId~d~~~v~~~~~-------~g~~vi~GDat~~~~L~~agi~~ 68 (413)
T 3l9w_A 4 GMRVIIAGF-GRFGQITGRLLLSSG-------VKMVVLDHDPDHIETLRK-------FGMKVFYGDATRMDLLESAGAAK 68 (413)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTT-------CCEEEEECCHHHHHHHHH-------TTCCCEESCTTCHHHHHHTTTTT
T ss_pred CCeEEEECC-CHHHHHHHHHHHHCC-------CCEEEEECCHHHHHHHHh-------CCCeEEEcCCCCHHHHHhcCCCc
Confidence 457999997 899999999999988 799999999999887764 2467899999999999987 889
Q ss_pred ccEEeecCCCCCCCCHHHHHHHHHhCCc
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACVHSGCD 116 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~~~g~~ 116 (452)
+|+||.+.+.. .....++..+.+.+.+
T Consensus 69 A~~viv~~~~~-~~n~~i~~~ar~~~p~ 95 (413)
T 3l9w_A 69 AEVLINAIDDP-QTNLQLTEMVKEHFPH 95 (413)
T ss_dssp CSEEEECCSSH-HHHHHHHHHHHHHCTT
T ss_pred cCEEEECCCCh-HHHHHHHHHHHHhCCC
Confidence 99999988532 2224456666666543
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00028 Score=70.28 Aligned_cols=73 Identities=12% Similarity=0.067 Sum_probs=55.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCce-EEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHH---HHHHH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIK-SLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPS---LHRLC 86 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~-~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~s---l~~~~ 86 (452)
.+++|+||+|.+|..+++.+...| . +|++.+|+.++++.+.++++. . ..+|..+.+. +.+..
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~G-------a~~Vi~~~~~~~~~~~~~~~~g~------~-~~~d~~~~~~~~~~~~~~ 227 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFLG-------CSRVVGICGTHEKCILLTSELGF------D-AAINYKKDNVAEQLRESC 227 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTT-------CSEEEEEESCHHHHHHHHHTSCC------S-EEEETTTSCHHHHHHHHC
T ss_pred cEEEEECCCcHHHHHHHHHHHHCC-------CCeEEEEeCCHHHHHHHHHHcCC------c-eEEecCchHHHHHHHHhc
Confidence 579999999999999999999888 7 999999999998777655641 2 3457766432 22222
Q ss_pred c-CccEEeecCC
Q 012947 87 S-QTKLLLNCVG 97 (452)
Q Consensus 87 ~-~~dvVIn~aG 97 (452)
. ++|+||||+|
T Consensus 228 ~~~~d~vi~~~G 239 (357)
T 2zb4_A 228 PAGVDVYFDNVG 239 (357)
T ss_dssp TTCEEEEEESCC
T ss_pred CCCCCEEEECCC
Confidence 2 5899999998
|
| >3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00071 Score=66.21 Aligned_cols=120 Identities=20% Similarity=0.278 Sum_probs=77.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEE-EEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLA-LAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~-iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
++++|.|+|. |.+|+.+++.|.+... .+++ +++|++++++. .+ +.+ .++++ +.+. .
T Consensus 8 ~~irv~IIG~-G~iG~~~~~~l~~~~~------~elvav~d~~~~~~~~----~g------~~~--~~~~~---l~~~-~ 64 (304)
T 3bio_A 8 KKIRAAIVGY-GNIGRYALQALREAPD------FEIAGIVRRNPAEVPF----EL------QPF--RVVSD---IEQL-E 64 (304)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHHHCTT------EEEEEEECC-----------CC------TTS--CEESS---GGGS-S
T ss_pred CCCEEEEECC-hHHHHHHHHHHhcCCC------CEEEEEEcCCHHHHHH----cC------CCc--CCHHH---HHhC-C
Confidence 3589999997 9999999999987542 6765 78998887643 21 221 22333 3333 6
Q ss_pred CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCc-HHHHHHHHHHHHHHHHhCccEEEcCCCCCcc
Q 012947 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGE-PEFMERMEARYHEKAVETGSLLVSACGFDSI 154 (452)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge-~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~ 154 (452)
++|+||.|..+... ..++..|++.|.|.++.+-- .....+. ..+.+.+++.|+.+.-+++|++.
T Consensus 65 ~~DvViiatp~~~h--~~~~~~al~aG~~Vi~ekP~~a~~~~~~-~~l~~~a~~~g~~~~v~~~~~p~ 129 (304)
T 3bio_A 65 SVDVALVCSPSREV--ERTALEILKKGICTADSFDIHDGILALR-RSLGDAAGKSGAAAVIASGWDPG 129 (304)
T ss_dssp SCCEEEECSCHHHH--HHHHHHHHTTTCEEEECCCCGGGHHHHH-HHHHHHHHHHTCEEECSCBBTTB
T ss_pred CCCEEEECCCchhh--HHHHHHHHHcCCeEEECCCCCCCCHHHH-HHHHHHHHhCCCEEEEeCCCCHH
Confidence 89999999865433 57788999999999987532 3333333 55667788888776666677544
|
| >2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A | Back alignment and structure |
|---|
Probab=97.41 E-value=5.3e-05 Score=75.92 Aligned_cols=98 Identities=12% Similarity=0.090 Sum_probs=63.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcC-----CCCCCCceEEEEEec--ChhH-HHHHHHHhCCCCCCCccEEEEeCCCHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLF-----NFPSSPIKSLALAGR--NPTR-VKQALQWASPSHSLSIPILTADTTDPPS 81 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g-----~~~~~~~~~v~iagR--~~~k-l~~l~~~l~~~~~~~v~~v~~Dl~d~~s 81 (452)
.++|.|.||||++|+.+++.|.+++ . .++..+.+ +..+ +..+...+. ...++.+ .|+ +++.
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~------~ei~~l~s~~~agk~~~~~~~~l~--~~~~~~~--~~~-~~~~ 77 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGHPAYADGR------LRIGALTAATSAGSTLGEHHPHLT--PLAHRVV--EPT-EAAV 77 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCHHHHTTS------EEEEEEEESSCTTSBGGGTCTTCG--GGTTCBC--EEC-CHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCCCCcc------EEEEEEECCCcCCCchhhhccccc--ccceeee--ccC-CHHH
Confidence 3689999999999999999999764 3 56665543 3322 221111110 0012222 344 3332
Q ss_pred HHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHH
Q 012947 82 LHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPE 125 (452)
Q Consensus 82 l~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~ 125 (452)
++++|+||.|+|.. ....+++++ +.|+..||+++...
T Consensus 78 ----~~~~DvVf~alg~~--~s~~~~~~~-~~G~~vIDlSa~~R 114 (352)
T 2nqt_A 78 ----LGGHDAVFLALPHG--HSAVLAQQL-SPETLIIDCGADFR 114 (352)
T ss_dssp ----HTTCSEEEECCTTS--CCHHHHHHS-CTTSEEEECSSTTT
T ss_pred ----hcCCCEEEECCCCc--chHHHHHHH-hCCCEEEEECCCcc
Confidence 45899999999754 347788888 88999999998753
|
| >1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* | Back alignment and structure |
|---|
Probab=97.40 E-value=0.0043 Score=58.79 Aligned_cols=106 Identities=18% Similarity=0.148 Sum_probs=69.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH-cCc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC-SQT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~-~~~ 89 (452)
++|.|+||+|.+|+.+++.+.+... ++++.+.... +| +++++ .++
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~------~elva~~d~~-------------------------~d---l~~~~~~~~ 46 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADD------LTLSAELDAG-------------------------DP---LSLLTDGNT 46 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTT------CEEEEEECTT-------------------------CC---THHHHHTTC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC------CEEEEEEccC-------------------------CC---HHHHhccCC
Confidence 4799999999999999999876631 6766444211 12 22333 378
Q ss_pred cEEeecCCCCCCCCHHHHHHHHHhCCcEEE-ecCcHHHHHHHHHHHHHHHHhC-ccEEEcCCCCCcch
Q 012947 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLD-ISGEPEFMERMEARYHEKAVET-GSLLVSACGFDSIP 155 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~~~g~~yvD-lsge~~~~~~~~~~~~~~A~~~-gv~iv~~~G~~s~P 155 (452)
|+||.+..|-. ....++.|.++|++.|- .+| |..+......+.++++ ++.++-+..|.-.+
T Consensus 47 DvvIDfT~p~a--~~~~~~~a~~~g~~~VigTTG---~~~e~~~~l~~aa~~~~~~~vv~a~N~siGv 109 (245)
T 1p9l_A 47 EVVIDFTHPDV--VMGNLEFLIDNGIHAVVGTTG---FTAERFQQVESWLVAKPNTSVLIAPNFAIGA 109 (245)
T ss_dssp CEEEECSCTTT--HHHHHHHHHHTTCEEEECCCC---CCHHHHHHHHHHHHTSTTCEEEECSCCCHHH
T ss_pred cEEEEccChHH--HHHHHHHHHHcCCCEEEcCCC---CCHHHHHHHHHHHHhCCCCCEEEECCccHHH
Confidence 99999987653 36788999999998665 333 3333335566777755 77666555553333
|
| >2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.40 E-value=3.7e-05 Score=76.88 Aligned_cols=99 Identities=13% Similarity=0.014 Sum_probs=63.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
.++|.|.||||++|+.+++.|.++.. .+++.+.+..+..+++.+... ...... ..++.+.+ + +.++
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~------~elv~v~s~~~~g~~~~~~~~--~~~g~~--~~~~~~~~---~-~~~v 69 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSHPY------LEVKQVTSRRFAGEPVHFVHP--NLRGRT--NLKFVPPE---K-LEPA 69 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCTT------EEEEEEBCSTTTTSBGGGTCG--GGTTTC--CCBCBCGG---G-CCCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCC------cEEEEEECchhhCchhHHhCc--hhcCcc--cccccchh---H-hcCC
Confidence 47899999999999999999987752 677666553322111111000 000000 11122322 2 3789
Q ss_pred cEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcH
Q 012947 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEP 124 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~ 124 (452)
|+||.|+|... ...+++.+.++|++.||+++..
T Consensus 70 DvV~~a~g~~~--s~~~a~~~~~aG~~VId~Sa~~ 102 (345)
T 2ozp_A 70 DILVLALPHGV--FAREFDRYSALAPVLVDLSADF 102 (345)
T ss_dssp SEEEECCCTTH--HHHTHHHHHTTCSEEEECSSTT
T ss_pred CEEEEcCCcHH--HHHHHHHHHHCCCEEEEcCccc
Confidence 99999997553 3677888899999999999864
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00032 Score=72.77 Aligned_cols=74 Identities=16% Similarity=0.368 Sum_probs=65.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-HcC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQ 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~-~~~ 88 (452)
.|+|+|.|+ |-+|+.+++.|..++ ++|+++++++++++++.+++ ++.++.+|.++++.|+++ +++
T Consensus 3 ~M~iiI~G~-G~vG~~la~~L~~~~-------~~v~vId~d~~~~~~~~~~~------~~~~i~Gd~~~~~~L~~Agi~~ 68 (461)
T 4g65_A 3 AMKIIILGA-GQVGGTLAENLVGEN-------NDITIVDKDGDRLRELQDKY------DLRVVNGHASHPDVLHEAGAQD 68 (461)
T ss_dssp CEEEEEECC-SHHHHHHHHHTCSTT-------EEEEEEESCHHHHHHHHHHS------SCEEEESCTTCHHHHHHHTTTT
T ss_pred cCEEEEECC-CHHHHHHHHHHHHCC-------CCEEEEECCHHHHHHHHHhc------CcEEEEEcCCCHHHHHhcCCCc
Confidence 589999998 889999999999887 89999999999999888765 468899999999999987 789
Q ss_pred ccEEeecCC
Q 012947 89 TKLLLNCVG 97 (452)
Q Consensus 89 ~dvVIn~aG 97 (452)
+|++|-+.+
T Consensus 69 ad~~ia~t~ 77 (461)
T 4g65_A 69 ADMLVAVTN 77 (461)
T ss_dssp CSEEEECCS
T ss_pred CCEEEEEcC
Confidence 999997653
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00026 Score=70.05 Aligned_cols=74 Identities=15% Similarity=0.027 Sum_probs=55.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH---
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC--- 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~--- 86 (452)
..+++|+||+|.+|..+++.+...| .+|++.+|++++++.+.++++. . ...|.++.+++.+.+
T Consensus 156 g~~vlI~Ga~g~iG~~~~~~a~~~G-------~~V~~~~~~~~~~~~~~~~~g~------~-~~~d~~~~~~~~~~~~~~ 221 (345)
T 2j3h_A 156 GETVYVSAASGAVGQLVGQLAKMMG-------CYVVGSAGSKEKVDLLKTKFGF------D-DAFNYKEESDLTAALKRC 221 (345)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTT-------CEEEEEESSHHHHHHHHHTSCC------S-EEEETTSCSCSHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHcCC------c-eEEecCCHHHHHHHHHHH
Confidence 3579999999999999999998888 7999999999998776655531 2 234766532333222
Q ss_pred --cCccEEeecCC
Q 012947 87 --SQTKLLLNCVG 97 (452)
Q Consensus 87 --~~~dvVIn~aG 97 (452)
.++|+||+|+|
T Consensus 222 ~~~~~d~vi~~~g 234 (345)
T 2j3h_A 222 FPNGIDIYFENVG 234 (345)
T ss_dssp CTTCEEEEEESSC
T ss_pred hCCCCcEEEECCC
Confidence 25899999997
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00065 Score=63.69 Aligned_cols=71 Identities=13% Similarity=0.201 Sum_probs=54.1
Q ss_pred CCeEEEEcC----------------CchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEE
Q 012947 10 LFDVIILGA----------------SGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILT 73 (452)
Q Consensus 10 ~~~ilV~GA----------------TG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~ 73 (452)
..+++|||| ||.+|.+++++|+++| ++|++++|+.. + . ... ..-.
T Consensus 8 gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~G-------a~V~l~~~~~~-l-------~--~~~--g~~~ 68 (226)
T 1u7z_A 8 HLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRG-------ANVTLVSGPVS-L-------P--TPP--FVKR 68 (226)
T ss_dssp TCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTT-------CEEEEEECSCC-C-------C--CCT--TEEE
T ss_pred CCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCC-------CEEEEEECCcc-c-------c--cCC--CCeE
Confidence 468999999 7999999999999999 89999888652 1 1 011 2346
Q ss_pred EeCCCHHHHHHHH----cCccEEeecCCCC
Q 012947 74 ADTTDPPSLHRLC----SQTKLLLNCVGPY 99 (452)
Q Consensus 74 ~Dl~d~~sl~~~~----~~~dvVIn~aGp~ 99 (452)
+|+++.+++.+.+ .++|++|||||..
T Consensus 69 ~dv~~~~~~~~~v~~~~~~~Dili~~Aav~ 98 (226)
T 1u7z_A 69 VDVMTALEMEAAVNASVQQQNIFIGCAAVA 98 (226)
T ss_dssp EECCSHHHHHHHHHHHGGGCSEEEECCBCC
T ss_pred EccCcHHHHHHHHHHhcCCCCEEEECCccc
Confidence 7898877665443 4789999999964
|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00024 Score=67.66 Aligned_cols=102 Identities=18% Similarity=0.204 Sum_probs=71.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh-------------------hHHHHHHHHhCCCCCCCcc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-------------------TRVKQALQWASPSHSLSIP 70 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~-------------------~kl~~l~~~l~~~~~~~v~ 70 (452)
..+|+|+|+ |.+|..++++|++.|. -++.+++++. .|.+.+.+.+.. ..+.+.
T Consensus 28 ~~~VlvvG~-GglG~~va~~La~~Gv------g~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~-~np~~~ 99 (251)
T 1zud_1 28 DSQVLIIGL-GGLGTPAALYLAGAGV------GTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQ-LNPDIQ 99 (251)
T ss_dssp TCEEEEECC-STTHHHHHHHHHHTTC------SEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHH-HCTTSE
T ss_pred cCcEEEEcc-CHHHHHHHHHHHHcCC------CeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHH-HCCCCE
Confidence 468999999 5699999999999983 4788886542 566655555431 012344
Q ss_pred EEEE--eCCCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEec
Q 012947 71 ILTA--DTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 71 ~v~~--Dl~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDls 121 (452)
+... ++ +.+.+.++++++|+||+|..... .-..+.++|.+.++.+|+..
T Consensus 100 v~~~~~~~-~~~~~~~~~~~~DvVi~~~d~~~-~r~~l~~~~~~~~~p~i~~~ 150 (251)
T 1zud_1 100 LTALQQRL-TGEALKDAVARADVVLDCTDNMA-TRQEINAACVALNTPLITAS 150 (251)
T ss_dssp EEEECSCC-CHHHHHHHHHHCSEEEECCSSHH-HHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEeccC-CHHHHHHHHhcCCEEEECCCCHH-HHHHHHHHHHHhCCCEEEEe
Confidence 3333 34 44678888999999999986332 22567788988888888764
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00043 Score=69.45 Aligned_cols=74 Identities=18% Similarity=0.183 Sum_probs=58.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
+.+++|+|+ |.+|+.+++.+...| .+|.+.+|+.++++.+.+... ..+. .+..+.+++.+.+.++
T Consensus 167 ~~~VlViGa-GgvG~~aa~~a~~~G-------a~V~v~dr~~~r~~~~~~~~~----~~~~---~~~~~~~~~~~~~~~~ 231 (361)
T 1pjc_A 167 PGKVVILGG-GVVGTEAAKMAVGLG-------AQVQIFDINVERLSYLETLFG----SRVE---LLYSNSAEIETAVAEA 231 (361)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHG----GGSE---EEECCHHHHHHHHHTC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCC-------CEEEEEeCCHHHHHHHHHhhC----ceeE---eeeCCHHHHHHHHcCC
Confidence 468999999 999999999999988 799999999999987765442 1121 2223567788888899
Q ss_pred cEEeecCCC
Q 012947 90 KLLLNCVGP 98 (452)
Q Consensus 90 dvVIn~aGp 98 (452)
|+||||+|.
T Consensus 232 DvVI~~~~~ 240 (361)
T 1pjc_A 232 DLLIGAVLV 240 (361)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCc
Confidence 999999974
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00044 Score=68.17 Aligned_cols=74 Identities=15% Similarity=0.031 Sum_probs=56.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH---
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC--- 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~--- 86 (452)
..+|+|+||+|.+|..+++.+...| .+|++++|++++++.+.++++. . ...|..+.+..+.+.
T Consensus 150 g~~vlI~Ga~g~iG~~~~~~a~~~G-------a~Vi~~~~~~~~~~~~~~~~g~------~-~~~~~~~~~~~~~~~~~~ 215 (336)
T 4b7c_A 150 GETVVISGAAGAVGSVAGQIARLKG-------CRVVGIAGGAEKCRFLVEELGF------D-GAIDYKNEDLAAGLKREC 215 (336)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTT-------CEEEEEESSHHHHHHHHHTTCC------S-EEEETTTSCHHHHHHHHC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHcCC------C-EEEECCCHHHHHHHHHhc
Confidence 4579999999999999999998888 7999999999999877566641 2 234666544333332
Q ss_pred -cCccEEeecCC
Q 012947 87 -SQTKLLLNCVG 97 (452)
Q Consensus 87 -~~~dvVIn~aG 97 (452)
.++|+||+|+|
T Consensus 216 ~~~~d~vi~~~g 227 (336)
T 4b7c_A 216 PKGIDVFFDNVG 227 (336)
T ss_dssp TTCEEEEEESSC
T ss_pred CCCceEEEECCC
Confidence 25899999997
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.33 E-value=0.0005 Score=67.49 Aligned_cols=73 Identities=18% Similarity=0.148 Sum_probs=55.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH---
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC--- 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~--- 86 (452)
..+++|+||+|.+|..+++.+...| .+|++.+|++++++.+.+ ++. . ...|.++.+..+++.
T Consensus 141 g~~vlV~Ga~ggiG~~~~~~a~~~G-------~~V~~~~~~~~~~~~~~~-~g~------~-~~~~~~~~~~~~~~~~~~ 205 (327)
T 1qor_A 141 DEQFLFHAAAGGVGLIACQWAKALG-------AKLIGTVGTAQKAQSALK-AGA------W-QVINYREEDLVERLKEIT 205 (327)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHHT-------CEEEEEESSHHHHHHHHH-HTC------S-EEEETTTSCHHHHHHHHT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHH-cCC------C-EEEECCCccHHHHHHHHh
Confidence 4579999999999999999999988 799999999998876544 531 2 235776654433333
Q ss_pred c--CccEEeecCC
Q 012947 87 S--QTKLLLNCVG 97 (452)
Q Consensus 87 ~--~~dvVIn~aG 97 (452)
. ++|+||||+|
T Consensus 206 ~~~~~D~vi~~~g 218 (327)
T 1qor_A 206 GGKKVRVVYDSVG 218 (327)
T ss_dssp TTCCEEEEEECSC
T ss_pred CCCCceEEEECCc
Confidence 2 5899999998
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00052 Score=68.11 Aligned_cols=73 Identities=15% Similarity=-0.027 Sum_probs=55.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..+++|+||+|.+|+.+++.+...| .+|++.+|++++++.+ ++++ .. ...|+++.+++.+.+.
T Consensus 170 g~~vlV~Ga~ggiG~~~~~~a~~~G-------a~V~~~~~~~~~~~~~-~~~g------~~-~~~d~~~~~~~~~~~~~~ 234 (347)
T 2hcy_A 170 GHWVAISGAAGGLGSLAVQYAKAMG-------YRVLGIDGGEGKEELF-RSIG------GE-VFIDFTKEKDIVGAVLKA 234 (347)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECSTTHHHHH-HHTT------CC-EEEETTTCSCHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CcEEEEcCCHHHHHHH-HHcC------Cc-eEEecCccHhHHHHHHHH
Confidence 3579999999999999999998888 7999999999888544 4453 12 2358775444444433
Q ss_pred ---CccEEeecCC
Q 012947 88 ---QTKLLLNCVG 97 (452)
Q Consensus 88 ---~~dvVIn~aG 97 (452)
+.|+||+++|
T Consensus 235 ~~~~~D~vi~~~g 247 (347)
T 2hcy_A 235 TDGGAHGVINVSV 247 (347)
T ss_dssp HTSCEEEEEECSS
T ss_pred hCCCCCEEEECCC
Confidence 5899999997
|
| >1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A* | Back alignment and structure |
|---|
Probab=97.30 E-value=0.006 Score=61.50 Aligned_cols=124 Identities=17% Similarity=0.147 Sum_probs=82.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEE-E-EecChhHHHHHHHHhCCCCCCCccEEEEeCCCH---------
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLA-L-AGRNPTRVKQALQWASPSHSLSIPILTADTTDP--------- 79 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~-i-agR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~--------- 79 (452)
.+|.|+|+||.+|+.+++.+.++.. .+++. + ++|+.+++.+...+++. + .+...|.+..
T Consensus 5 ~rI~ILGsTGSIG~~~l~vi~~~p~-----~~~v~al~ag~ni~~l~~~~~~f~~----~-~v~v~d~~~~~~l~~~l~~ 74 (388)
T 1r0k_A 5 RTVTVLGATGSIGHSTLDLIERNLD-----RYQVIALTANRNVKDLADAAKRTNA----K-RAVIADPSLYNDLKEALAG 74 (388)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTGG-----GEEEEEEEESSCHHHHHHHHHHTTC----S-EEEESCGGGHHHHHHHTTT
T ss_pred eEEEEECCCeEeHHHHHHHHHhCcC-----cEEEEEEEcCCCHHHHHHHHHHcCC----c-EEEEcChHHHHHHHHHhcc
Confidence 5799999999999999999988641 15654 4 78999999888887641 1 2233343222
Q ss_pred ---------HHHHHHHc-CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcC
Q 012947 80 ---------PSLHRLCS-QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSA 148 (452)
Q Consensus 80 ---------~sl~~~~~-~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~ 148 (452)
+.+.+++. .+|+||++.+- ..|.....+++++|.|.+=.+=|.....- ..+.+.|+++|+.+++.
T Consensus 75 ~~~~v~~g~~~~~el~~~~iDvVV~ai~G--~aGl~ptlaAi~aGK~VvlANKE~lv~~G--~~l~~~A~~~gv~liPV 149 (388)
T 1r0k_A 75 SSVEAAAGADALVEAAMMGADWTMAAIIG--CAGLKATLAAIRKGKTVALANKESLVSAG--GLMIDAVREHGTTLLPV 149 (388)
T ss_dssp CSSEEEESHHHHHHHHTSCCSEEEECCCS--GGGHHHHHHHHHTTSEEEECCSHHHHTTH--HHHHHHHHHHTCEEEEC
T ss_pred CCcEEEeCccHHHHHHcCCCCEEEEeCCC--HHHHHHHHHHHHCCCEEEEeCcHHHHhhH--HHHHHHHHHcCCEEEEe
Confidence 22334443 27999999832 23567778899999998866554332221 34456788889998654
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.27 E-value=0.0007 Score=67.45 Aligned_cols=73 Identities=11% Similarity=0.041 Sum_probs=55.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHH---HHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSL---HRLC 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl---~~~~ 86 (452)
..+++|+||+|.+|..+++.+...| ++|++.+|++++++. .++++ .. ...|.++.+.. .+..
T Consensus 171 g~~vlV~GasggiG~~~~~~a~~~G-------a~Vi~~~~~~~~~~~-~~~~g------a~-~~~d~~~~~~~~~~~~~~ 235 (351)
T 1yb5_A 171 GESVLVHGASGGVGLAACQIARAYG-------LKILGTAGTEEGQKI-VLQNG------AH-EVFNHREVNYIDKIKKYV 235 (351)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTT-------CEEEEEESSHHHHHH-HHHTT------CS-EEEETTSTTHHHHHHHHH
T ss_pred cCEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCChhHHHH-HHHcC------CC-EEEeCCCchHHHHHHHHc
Confidence 3579999999999999999999888 799999999999874 45553 12 23577664433 3333
Q ss_pred c--CccEEeecCC
Q 012947 87 S--QTKLLLNCVG 97 (452)
Q Consensus 87 ~--~~dvVIn~aG 97 (452)
. ++|+||||+|
T Consensus 236 ~~~~~D~vi~~~G 248 (351)
T 1yb5_A 236 GEKGIDIIIEMLA 248 (351)
T ss_dssp CTTCEEEEEESCH
T ss_pred CCCCcEEEEECCC
Confidence 3 6899999997
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00056 Score=68.12 Aligned_cols=74 Identities=11% Similarity=0.070 Sum_probs=56.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHH---HHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSL---HRLC 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl---~~~~ 86 (452)
..+++|+||+|.+|..+++.+...| .+|++.+|++++++.+ ++++. . ..+|.++.+.. .+..
T Consensus 163 g~~vlV~Ga~ggiG~~~~~~a~~~G-------a~Vi~~~~~~~~~~~~-~~~g~------~-~~~~~~~~~~~~~~~~~~ 227 (354)
T 2j8z_A 163 GDYVLIHAGLSGVGTAAIQLTRMAG-------AIPLVTAGSQKKLQMA-EKLGA------A-AGFNYKKEDFSEATLKFT 227 (354)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHH-HHHTC------S-EEEETTTSCHHHHHHHHT
T ss_pred CCEEEEECCccHHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHH-HHcCC------c-EEEecCChHHHHHHHHHh
Confidence 3579999999999999999999888 7999999999998766 55541 2 23576664433 3333
Q ss_pred c--CccEEeecCCC
Q 012947 87 S--QTKLLLNCVGP 98 (452)
Q Consensus 87 ~--~~dvVIn~aGp 98 (452)
. ++|+||+|+|.
T Consensus 228 ~~~~~d~vi~~~G~ 241 (354)
T 2j8z_A 228 KGAGVNLILDCIGG 241 (354)
T ss_dssp TTSCEEEEEESSCG
T ss_pred cCCCceEEEECCCc
Confidence 2 58999999984
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00089 Score=62.94 Aligned_cols=73 Identities=11% Similarity=0.150 Sum_probs=53.5
Q ss_pred CCeEEEEcC----------------CchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEE
Q 012947 10 LFDVIILGA----------------SGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILT 73 (452)
Q Consensus 10 ~~~ilV~GA----------------TG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~ 73 (452)
..+|+|||| ||.+|.++|++++++| ++|++++|+.+.. . ..+. .+..
T Consensus 3 gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~G-------a~V~lv~~~~~~~-~-------~~~~--~~~~ 65 (232)
T 2gk4_A 3 AMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAG-------YEVCLITTKRALK-P-------EPHP--NLSI 65 (232)
T ss_dssp CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTT-------CEEEEEECTTSCC-C-------CCCT--TEEE
T ss_pred CCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCC-------CEEEEEeCCcccc-c-------cCCC--CeEE
Confidence 468999999 9999999999999999 8999999975311 0 0012 3445
Q ss_pred EeCCCHHHHHH----HHcCccEEeecCCCC
Q 012947 74 ADTTDPPSLHR----LCSQTKLLLNCVGPY 99 (452)
Q Consensus 74 ~Dl~d~~sl~~----~~~~~dvVIn~aGp~ 99 (452)
.|+...+++.+ .+.++|++||+|+..
T Consensus 66 ~~v~s~~em~~~v~~~~~~~Dili~aAAvs 95 (232)
T 2gk4_A 66 REITNTKDLLIEMQERVQDYQVLIHSMAVS 95 (232)
T ss_dssp EECCSHHHHHHHHHHHGGGCSEEEECSBCC
T ss_pred EEHhHHHHHHHHHHHhcCCCCEEEEcCccc
Confidence 57766655443 345799999999864
|
| >2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A* | Back alignment and structure |
|---|
Probab=97.24 E-value=9.5e-05 Score=77.99 Aligned_cols=114 Identities=21% Similarity=0.192 Sum_probs=71.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH-HHcCc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHR-LCSQT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~-~~~~~ 89 (452)
.+++|+|| |++|++++..|++.| .+|.+++|+.++++++.++++ ..+ .++.| +.+ .....
T Consensus 365 k~vlV~Ga-GGig~aia~~L~~~G-------~~V~i~~R~~~~a~~la~~~~----~~~----~~~~d---l~~~~~~~~ 425 (523)
T 2o7s_A 365 KTVVVIGA-GGAGKALAYGAKEKG-------AKVVIANRTYERALELAEAIG----GKA----LSLTD---LDNYHPEDG 425 (523)
T ss_dssp -CEEEECC-SHHHHHHHHHHHHHC-------C-CEEEESSHHHHHHHHHHTT----C-C----EETTT---TTTC--CCS
T ss_pred CEEEEECC-cHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHcC----Cce----eeHHH---hhhccccCc
Confidence 47999999 699999999999998 789999999999999888763 111 13333 222 12458
Q ss_pred cEEeecCCCCCCC---CHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcC
Q 012947 90 KLLLNCVGPYRLH---GDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSA 148 (452)
Q Consensus 90 dvVIn~aGp~~~~---~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~ 148 (452)
|+||||+|..... ..++.+...+.....+|+...+..+ .+-..+++.|..++++
T Consensus 426 DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~~T-----~ll~~a~~~G~~~i~G 482 (523)
T 2o7s_A 426 MVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRIT-----RLLREAEESGAITVSG 482 (523)
T ss_dssp EEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSSSC-----HHHHHHHTTTCEEECH
T ss_pred eEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCccC-----HHHHHHHHCCCEEECc
Confidence 9999999853211 1122222333344577876544332 2234456677776644
|
| >2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A* | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00019 Score=68.59 Aligned_cols=109 Identities=18% Similarity=0.196 Sum_probs=75.7
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCccE
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKL 91 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~dv 91 (452)
+++|+|+ |.+|+.+++.|.+.+ .+|.+++|+.++.+++.++++. . ..+ +.++ +++|+
T Consensus 118 ~v~iiG~-G~~g~~~a~~l~~~g-------~~v~v~~r~~~~~~~l~~~~~~------~-----~~~---~~~~-~~~Di 174 (263)
T 2d5c_A 118 PALVLGA-GGAGRAVAFALREAG-------LEVWVWNRTPQRALALAEEFGL------R-----AVP---LEKA-REARL 174 (263)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTT-------CCEEEECSSHHHHHHHHHHHTC------E-----ECC---GGGG-GGCSE
T ss_pred eEEEECC-cHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHhcc------c-----hhh---Hhhc-cCCCE
Confidence 7999997 779999999999987 6899999999999888877641 1 123 3445 78999
Q ss_pred EeecCCCCCCCC--HHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcC
Q 012947 92 LLNCVGPYRLHG--DPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSA 148 (452)
Q Consensus 92 VIn~aGp~~~~~--~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~ 148 (452)
||+|+++..... ..+...+++.+.+.+|++..+.-. . +.+.+++.|+.++++
T Consensus 175 vi~~tp~~~~~~~~~~l~~~~l~~g~~viD~~~~p~~t-~----l~~~a~~~g~~~v~g 228 (263)
T 2d5c_A 175 LVNATRVGLEDPSASPLPAELFPEEGAAVDLVYRPLWT-R----FLREAKAKGLKVQTG 228 (263)
T ss_dssp EEECSSTTTTCTTCCSSCGGGSCSSSEEEESCCSSSSC-H----HHHHHHHTTCEEECS
T ss_pred EEEccCCCCCCCCCCCCCHHHcCCCCEEEEeecCCccc-H----HHHHHHHCcCEEECc
Confidence 999997653211 111123455678899998653321 1 234566678877744
|
| >3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=97.22 E-value=0.0032 Score=62.20 Aligned_cols=122 Identities=14% Similarity=0.081 Sum_probs=83.1
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEE-EEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLA-LAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~-iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
+.++|.|+|+ |.+|+..++.|.+... .+++ +++|+.++++++.++++ +... .+++++++
T Consensus 3 ~~~rvgiiG~-G~~g~~~~~~l~~~~~------~~l~av~d~~~~~~~~~a~~~g------~~~~-------~~~~~~l~ 62 (344)
T 3euw_A 3 LTLRIALFGA-GRIGHVHAANIAANPD------LELVVIADPFIEGAQRLAEANG------AEAV-------ASPDEVFA 62 (344)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHHHCTT------EEEEEEECSSHHHHHHHHHTTT------CEEE-------SSHHHHTT
T ss_pred CceEEEEECC-cHHHHHHHHHHHhCCC------cEEEEEECCCHHHHHHHHHHcC------Ccee-------CCHHHHhc
Confidence 4578999998 9999999999988642 6654 78999999988877542 2211 24667777
Q ss_pred --CccEEeecCCCCCCCCHHHHHHHHHhCCcEEE---ecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchh
Q 012947 88 --QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLD---ISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPA 156 (452)
Q Consensus 88 --~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvD---lsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~ 156 (452)
++|+|+.|..+.. + ..++..|+++|.|.+- ++-...-. ..+.+.++++|+.+..+.-+-..|.
T Consensus 63 ~~~~D~V~i~tp~~~-h-~~~~~~al~~gk~v~~EKP~~~~~~~~----~~l~~~a~~~g~~~~v~~~~r~~p~ 130 (344)
T 3euw_A 63 RDDIDGIVIGSPTST-H-VDLITRAVERGIPALCEKPIDLDIEMV----RACKEKIGDGASKVMLGFNRRFDPS 130 (344)
T ss_dssp CSCCCEEEECSCGGG-H-HHHHHHHHHTTCCEEECSCSCSCHHHH----HHHHHHHGGGGGGEEECCGGGGCHH
T ss_pred CCCCCEEEEeCCchh-h-HHHHHHHHHcCCcEEEECCCCCCHHHH----HHHHHHHHhcCCeEEecchhhcCHH
Confidence 7899999885433 2 6788899999998542 12222222 3456678888876655544444553
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00066 Score=66.89 Aligned_cols=74 Identities=15% Similarity=0.073 Sum_probs=55.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHH---HHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPS---LHRLC 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~s---l~~~~ 86 (452)
..+++|+||+|.+|..+++.+...| .+|++.+|++++++.+. +++. . ...|.++.+. +.+..
T Consensus 146 g~~vlV~Ga~ggiG~~~~~~a~~~G-------~~Vi~~~~~~~~~~~~~-~~g~------~-~~~d~~~~~~~~~i~~~~ 210 (333)
T 1wly_A 146 GDYVLIHAAAGGMGHIMVPWARHLG-------ATVIGTVSTEEKAETAR-KLGC------H-HTINYSTQDFAEVVREIT 210 (333)
T ss_dssp TCEEEETTTTSTTHHHHHHHHHHTT-------CEEEEEESSHHHHHHHH-HHTC------S-EEEETTTSCHHHHHHHHH
T ss_pred CCEEEEECCccHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHH-HcCC------C-EEEECCCHHHHHHHHHHh
Confidence 3579999999999999999999888 79999999998887654 4531 2 2347765433 33333
Q ss_pred c--CccEEeecCCC
Q 012947 87 S--QTKLLLNCVGP 98 (452)
Q Consensus 87 ~--~~dvVIn~aGp 98 (452)
. ++|+||||+|.
T Consensus 211 ~~~~~d~vi~~~g~ 224 (333)
T 1wly_A 211 GGKGVDVVYDSIGK 224 (333)
T ss_dssp TTCCEEEEEECSCT
T ss_pred CCCCCeEEEECCcH
Confidence 2 58999999984
|
| >3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00069 Score=67.83 Aligned_cols=104 Identities=15% Similarity=0.151 Sum_probs=72.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh-------------------hHHHHHHHHhCC-CCCCCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-------------------TRVKQALQWASP-SHSLSI 69 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~-------------------~kl~~l~~~l~~-~~~~~v 69 (452)
..+|+|+|+ |.+|..++++|++.|. -++.+++++. .|.+.+.+.+.. ....++
T Consensus 118 ~~~VlvvG~-GglGs~va~~La~aGv------g~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v 190 (353)
T 3h5n_A 118 NAKVVILGC-GGIGNHVSVILATSGI------GEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISV 190 (353)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHHTC------SEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEE
T ss_pred CCeEEEECC-CHHHHHHHHHHHhCCC------CeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeE
Confidence 467999998 7799999999999984 5888888753 244444444421 122345
Q ss_pred cEEEEeCCCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEec
Q 012947 70 PILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 70 ~~v~~Dl~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDls 121 (452)
..+..++++...+.. +++.|+||+|...+...-..+.++|.+.++.+|+..
T Consensus 191 ~~~~~~i~~~~~~~~-~~~~DlVvd~~Dn~~~~r~~ln~~c~~~~~p~i~~~ 241 (353)
T 3h5n_A 191 SEIALNINDYTDLHK-VPEADIWVVSADHPFNLINWVNKYCVRANQPYINAG 241 (353)
T ss_dssp EEEECCCCSGGGGGG-SCCCSEEEECCCCSTTHHHHHHHHHHHTTCCEEEEE
T ss_pred EEeecccCchhhhhH-hccCCEEEEecCChHHHHHHHHHHHHHhCCCEEEEE
Confidence 555666766554666 899999999885433222456789999999988764
|
| >2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00041 Score=69.40 Aligned_cols=101 Identities=13% Similarity=0.082 Sum_probs=63.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEe-cChhHHHHHHHHhCCCC-----CCCccEEEEeCCCHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAG-RNPTRVKQALQWASPSH-----SLSIPILTADTTDPPSLH 83 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iag-R~~~kl~~l~~~l~~~~-----~~~v~~v~~Dl~d~~sl~ 83 (452)
.++|.|.||||++|+.+++.|.++.. .++..+. .+.+..+.+.+...... .....+...|. |++.
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~------~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~-- 74 (350)
T 2ep5_A 4 KIKVSLLGSTGMVGQKMVKMLAKHPY------LELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVST-NYED-- 74 (350)
T ss_dssp CEEEEEESCSSHHHHHHHHHHTTCSS------EEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECS-SGGG--
T ss_pred CcEEEEECcCCHHHHHHHHHHHhCCC------cEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeC-CHHH--
Confidence 47899999999999999999887642 6776664 22222112222111000 00012222344 3333
Q ss_pred HHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCc
Q 012947 84 RLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGE 123 (452)
Q Consensus 84 ~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge 123 (452)
++++|+|+.|.|.+. ...+++.++++|++.||+++.
T Consensus 75 --~~~vDvVf~atp~~~--s~~~a~~~~~aG~~VId~s~~ 110 (350)
T 2ep5_A 75 --HKDVDVVLSALPNEL--AESIELELVKNGKIVVSNASP 110 (350)
T ss_dssp --GTTCSEEEECCCHHH--HHHHHHHHHHTTCEEEECSST
T ss_pred --hcCCCEEEECCChHH--HHHHHHHHHHCCCEEEECCcc
Confidence 268999999986543 367889999999999999975
|
| >3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* | Back alignment and structure |
|---|
Probab=97.20 E-value=0.0022 Score=63.42 Aligned_cols=128 Identities=11% Similarity=0.164 Sum_probs=78.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC--CC-CCCccEEEEeCCCHHHHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--SH-SLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~--~~-~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
.++|.|+|| |++|..++..|+..+.. -++.+.++++++++....++.. +. ...+.+... + .+.+
T Consensus 5 ~~kI~ViGa-G~vG~~~a~~l~~~~~~-----~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~---~----~~a~ 71 (326)
T 3pqe_A 5 VNKVALIGA-GFVGSSYAFALINQGIT-----DELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYG---T----YEDC 71 (326)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCC-----SEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEE---C----GGGG
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCC-----ceEEEEecchHHHHHHHHHHHhccccccCCeEEEeC---c----HHHh
Confidence 468999997 99999999999988720 2899999999998876555531 10 123333322 2 2468
Q ss_pred cCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhh
Q 012947 87 SQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQ 166 (452)
Q Consensus 87 ~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~ 166 (452)
+++|+||.++|.....|+.-.+.... ....++.+.....+.+. .++++.. +-|.|+.++.+.+.
T Consensus 72 ~~aDvVvi~ag~p~kpG~~R~dL~~~----------N~~Iv~~i~~~I~~~~p--~a~vlvv----tNPvd~~t~~~~k~ 135 (326)
T 3pqe_A 72 KDADIVCICAGANQKPGETRLELVEK----------NLKIFKGIVSEVMASGF--DGIFLVA----TNPVDILTYATWKF 135 (326)
T ss_dssp TTCSEEEECCSCCCCTTCCHHHHHHH----------HHHHHHHHHHHHHHTTC--CSEEEEC----SSSHHHHHHHHHHH
T ss_pred CCCCEEEEecccCCCCCccHHHHHHH----------HHHHHHHHHHHHHHhcC--CeEEEEc----CChHHHHHHHHHHh
Confidence 89999999999655444211111111 11233444333333332 3344322 35889999888775
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0009 Score=67.54 Aligned_cols=74 Identities=20% Similarity=0.194 Sum_probs=60.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
+..+++|+|+ |.+|+.+++.+...| .+|.+.+|+.++++.+.+.++ ..+ ..+..+.+++.+.+++
T Consensus 167 ~g~~V~ViG~-G~iG~~~a~~a~~~G-------a~V~~~d~~~~~l~~~~~~~g----~~~---~~~~~~~~~l~~~l~~ 231 (377)
T 2vhw_A 167 EPADVVVIGA-GTAGYNAARIANGMG-------ATVTVLDINIDKLRQLDAEFC----GRI---HTRYSSAYELEGAVKR 231 (377)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHTT----TSS---EEEECCHHHHHHHHHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCC-------CEEEEEeCCHHHHHHHHHhcC----Cee---EeccCCHHHHHHHHcC
Confidence 4568999998 999999999999988 799999999999887766553 122 2344566788899999
Q ss_pred ccEEeecCC
Q 012947 89 TKLLLNCVG 97 (452)
Q Consensus 89 ~dvVIn~aG 97 (452)
+|+||+|++
T Consensus 232 aDvVi~~~~ 240 (377)
T 2vhw_A 232 ADLVIGAVL 240 (377)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 999999987
|
| >3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A* | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0014 Score=65.14 Aligned_cols=102 Identities=14% Similarity=0.094 Sum_probs=72.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh-------------------hHHHHHHHHhCCCCCCCcc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-------------------TRVKQALQWASPSHSLSIP 70 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~-------------------~kl~~l~~~l~~~~~~~v~ 70 (452)
..+|+|+|+ |.+|..++++|+..|- -++.+++++. .|.+.+++.+.. ..+.+.
T Consensus 34 ~~~VlIvGa-GGlGs~va~~La~aGV------g~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~-inP~v~ 105 (340)
T 3rui_A 34 NTKVLLLGA-GTLGCYVSRALIAWGV------RKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKR-IFPLMD 105 (340)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTC------CEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHH-HCTTCE
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCC------CEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHH-hCCCCE
Confidence 568999998 7789999999999984 5888887753 455555444421 123444
Q ss_pred EEEEe--C--------------CCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEe
Q 012947 71 ILTAD--T--------------TDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDI 120 (452)
Q Consensus 71 ~v~~D--l--------------~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDl 120 (452)
+...+ + .+.+.+.+++++.|+||+|...+. ....+.++|.+.++.+|+.
T Consensus 106 v~~~~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tDn~~-tR~lin~~c~~~~~plI~a 170 (340)
T 3rui_A 106 ATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRE-SRWLPSLLSNIENKTVINA 170 (340)
T ss_dssp EEEECCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSTG-GGHHHHHHHHHTTCEEEEE
T ss_pred EEEEeccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCCCHH-HHHHHHHHHHHcCCcEEEe
Confidence 44433 2 134567788999999999986543 2356789999999988874
|
| >2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* | Back alignment and structure |
|---|
Probab=97.13 E-value=0.001 Score=61.59 Aligned_cols=89 Identities=17% Similarity=0.173 Sum_probs=61.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
.++|.|+| +|.+|+.+++.|.+.+ ++|.+.+|+.++++++.+ ..+... ++.++++++
T Consensus 28 ~~~I~iiG-~G~~G~~la~~l~~~g-------~~V~~~~r~~~~~~~~~~-------~g~~~~--------~~~~~~~~~ 84 (215)
T 2vns_A 28 APKVGILG-SGDFARSLATRLVGSG-------FKVVVGSRNPKRTARLFP-------SAAQVT--------FQEEAVSSP 84 (215)
T ss_dssp -CCEEEEC-CSHHHHHHHHHHHHTT-------CCEEEEESSHHHHHHHSB-------TTSEEE--------EHHHHTTSC
T ss_pred CCEEEEEc-cCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHH-------cCCcee--------cHHHHHhCC
Confidence 46899999 6999999999999987 689999999988765532 123221 355677899
Q ss_pred cEEeecCCCCCCCCHHHH--HHHHHhCCcEEEecCcH
Q 012947 90 KLLLNCVGPYRLHGDPVA--AACVHSGCDYLDISGEP 124 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv--~ac~~~g~~yvDlsge~ 124 (452)
|+||.++.+... ..++ .... .+...||++...
T Consensus 85 DvVi~av~~~~~--~~v~~l~~~~-~~~~vv~~s~g~ 118 (215)
T 2vns_A 85 EVIFVAVFREHY--SSLCSLSDQL-AGKILVDVSNPT 118 (215)
T ss_dssp SEEEECSCGGGS--GGGGGGHHHH-TTCEEEECCCCC
T ss_pred CEEEECCChHHH--HHHHHHHHhc-CCCEEEEeCCCc
Confidence 999999976432 1222 2222 456677776543
|
| >3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A* | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0039 Score=61.95 Aligned_cols=127 Identities=11% Similarity=0.093 Sum_probs=83.9
Q ss_pred CCCCCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEE-EEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHH
Q 012947 4 QSQIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSL 82 (452)
Q Consensus 4 ~~~~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v-~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl 82 (452)
++.+.++++|.|+|+ |.+|+..++.|.+..+ ..++ ++++|++++++++.++++ +. . .+| +
T Consensus 7 ~m~~~~~~rvgiiG~-G~~g~~~~~~l~~~~~-----~~~lvav~d~~~~~~~~~~~~~~------~~--~--~~~---~ 67 (354)
T 3q2i_A 7 PPITDRKIRFALVGC-GRIANNHFGALEKHAD-----RAELIDVCDIDPAALKAAVERTG------AR--G--HAS---L 67 (354)
T ss_dssp CCCCSSCEEEEEECC-STTHHHHHHHHHHTTT-----TEEEEEEECSSHHHHHHHHHHHC------CE--E--ESC---H
T ss_pred ecCCCCcceEEEEcC-cHHHHHHHHHHHhCCC-----CeEEEEEEcCCHHHHHHHHHHcC------Cc--e--eCC---H
Confidence 344456789999998 8899999999988721 1664 588999999988888763 21 1 233 4
Q ss_pred HHHHc--CccEEeecCCCCCCCCHHHHHHHHHhCCcEEE---ecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcch
Q 012947 83 HRLCS--QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLD---ISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIP 155 (452)
Q Consensus 83 ~~~~~--~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvD---lsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P 155 (452)
+++++ ++|+|+-|..+.. + ..++..|+++|.|.+- ++....-. ..+.+.++++|+.+..+.-+-..|
T Consensus 68 ~~ll~~~~~D~V~i~tp~~~-h-~~~~~~al~~gk~v~~EKP~a~~~~~~----~~l~~~a~~~g~~~~v~~~~r~~p 139 (354)
T 3q2i_A 68 TDMLAQTDADIVILTTPSGL-H-PTQSIECSEAGFHVMTEKPMATRWEDG----LEMVKAADKAKKHLFVVKQNRRNA 139 (354)
T ss_dssp HHHHHHCCCSEEEECSCGGG-H-HHHHHHHHHTTCEEEECSSSCSSHHHH----HHHHHHHHHHTCCEEECCGGGGSH
T ss_pred HHHhcCCCCCEEEECCCcHH-H-HHHHHHHHHCCCCEEEeCCCcCCHHHH----HHHHHHHHHhCCeEEEEEcccCCH
Confidence 55554 7999998875443 2 5788899999998552 22222222 344566777787665444333455
|
| >2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0011 Score=62.22 Aligned_cols=113 Identities=14% Similarity=0.106 Sum_probs=74.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEE-EEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH-cC
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC-SQ 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v-~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~-~~ 88 (452)
++|.|+|+ |.+|+.+++.|.+.+ +++ .+++|+. +.+ . ..+| +++++ .+
T Consensus 1 m~vgiIG~-G~mG~~~~~~l~~~g-------~~lv~v~d~~~-~~~------------~------~~~~---~~~l~~~~ 50 (236)
T 2dc1_A 1 MLVGLIGY-GAIGKFLAEWLERNG-------FEIAAILDVRG-EHE------------K------MVRG---IDEFLQRE 50 (236)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT-------CEEEEEECSSC-CCT------------T------EESS---HHHHTTSC
T ss_pred CEEEEECC-CHHHHHHHHHHhcCC-------CEEEEEEecCc-chh------------h------hcCC---HHHHhcCC
Confidence 47899997 999999999998655 676 6888874 221 1 1233 44555 68
Q ss_pred ccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcch
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIP 155 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P 155 (452)
+|+||.|+++... ..++..|++.|.|.|+.+....-..+....+.+.++++|+.+...+|+.+.+
T Consensus 51 ~DvVv~~~~~~~~--~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~l~~~a~~~g~~~~i~~~~~g~~ 115 (236)
T 2dc1_A 51 MDVAVEAASQQAV--KDYAEKILKAGIDLIVLSTGAFADRDFLSRVREVCRKTGRRVYIASGAIGGL 115 (236)
T ss_dssp CSEEEECSCHHHH--HHHHHHHHHTTCEEEESCGGGGGSHHHHHHHHHHHHHHCCCEEECCTTCSCH
T ss_pred CCEEEECCCHHHH--HHHHHHHHHCCCcEEEECcccCChHHHHHHHHHHHHhcCCeEEecCccccCh
Confidence 9999999976422 5677889999999998864332222222344566777777654445554443
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=97.09 E-value=0.0022 Score=62.17 Aligned_cols=115 Identities=16% Similarity=0.149 Sum_probs=75.1
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
+..++.|+|+ |.+|+.+++.|...| .+|.+.+|+.++.+.+. +++ +..+ + .+++++++++
T Consensus 154 ~g~~v~IiG~-G~iG~~~a~~l~~~G-------~~V~~~dr~~~~~~~~~-~~g------~~~~--~---~~~l~~~l~~ 213 (293)
T 3d4o_A 154 HGANVAVLGL-GRVGMSVARKFAALG-------AKVKVGARESDLLARIA-EMG------MEPF--H---ISKAAQELRD 213 (293)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTT-------CEEEEEESSHHHHHHHH-HTT------SEEE--E---GGGHHHHTTT
T ss_pred CCCEEEEEee-CHHHHHHHHHHHhCC-------CEEEEEECCHHHHHHHH-HCC------Ceec--C---hhhHHHHhcC
Confidence 3568999996 899999999999888 79999999998876543 332 2222 2 3467888999
Q ss_pred ccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCC
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGF 151 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~ 151 (452)
+|+|++++.. ...+...++ ..+.+...||++..+.-+. + +.++..|+.++..-|.
T Consensus 214 aDvVi~~~p~-~~i~~~~l~-~mk~~~~lin~ar~~~~~~-----~-~~a~~~Gv~~~~~~~l 268 (293)
T 3d4o_A 214 VDVCINTIPA-LVVTANVLA-EMPSHTFVIDLASKPGGTD-----F-RYAEKRGIKALLVPGL 268 (293)
T ss_dssp CSEEEECCSS-CCBCHHHHH-HSCTTCEEEECSSTTCSBC-----H-HHHHHHTCEEEECCCH
T ss_pred CCEEEECCCh-HHhCHHHHH-hcCCCCEEEEecCCCCCCC-----H-HHHHHCCCEEEECCCC
Confidence 9999999854 333344333 2345667888874221110 1 2344557766544333
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=97.09 E-value=0.0029 Score=64.34 Aligned_cols=70 Identities=16% Similarity=0.147 Sum_probs=56.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCce-EEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIK-SLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~-~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
..+|+|+|+ |.+|+.+++.|...| . +|.+++|+.++++++.++++. .. .+ .+++.+.+.+
T Consensus 167 g~~VlIiGa-G~iG~~~a~~l~~~G-------~~~V~v~~r~~~ra~~la~~~g~------~~--~~---~~~l~~~l~~ 227 (404)
T 1gpj_A 167 DKTVLVVGA-GEMGKTVAKSLVDRG-------VRAVLVANRTYERAVELARDLGG------EA--VR---FDELVDHLAR 227 (404)
T ss_dssp TCEEEEESC-CHHHHHHHHHHHHHC-------CSEEEEECSSHHHHHHHHHHHTC------EE--CC---GGGHHHHHHT
T ss_pred CCEEEEECh-HHHHHHHHHHHHHCC-------CCEEEEEeCCHHHHHHHHHHcCC------ce--ec---HHhHHHHhcC
Confidence 468999998 999999999999988 5 899999999998888877741 21 22 2457777889
Q ss_pred ccEEeecCCC
Q 012947 89 TKLLLNCVGP 98 (452)
Q Consensus 89 ~dvVIn~aGp 98 (452)
+|+||+|.|.
T Consensus 228 aDvVi~at~~ 237 (404)
T 1gpj_A 228 SDVVVSATAA 237 (404)
T ss_dssp CSEEEECCSS
T ss_pred CCEEEEccCC
Confidence 9999999864
|
| >1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=97.09 E-value=0.0006 Score=68.27 Aligned_cols=99 Identities=13% Similarity=0.071 Sum_probs=62.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh-HHHHHHHHhCCCC-------CCCccEEEEeCCCHHHH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-RVKQALQWASPSH-------SLSIPILTADTTDPPSL 82 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~-kl~~l~~~l~~~~-------~~~v~~v~~Dl~d~~sl 82 (452)
++|.|.||||++|+.+++.|.++.. .++..+.|+.. ..+.+.+...... ..++.+. +. |++
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~p~------~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~-- 77 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADHPM------FELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVI--PT-DPK-- 77 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCSS------EEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCE--ES-CTT--
T ss_pred ceEEEECcCCHHHHHHHHHHhcCCC------CEEEEEEcccccccccHHHhcccccccccccCceeeEEE--eC-CHH--
Confidence 6899999999999999999987642 78876654322 1111211111000 0011111 11 222
Q ss_pred HHHHc-CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCc
Q 012947 83 HRLCS-QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGE 123 (452)
Q Consensus 83 ~~~~~-~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge 123 (452)
++.+ ++|+||.|.|... ...+++.+.+.|++.||+++.
T Consensus 78 -~~~~~~~DvV~~atp~~~--~~~~a~~~~~aG~~VId~s~~ 116 (354)
T 1ys4_A 78 -HEEFEDVDIVFSALPSDL--AKKFEPEFAKEGKLIFSNASA 116 (354)
T ss_dssp -SGGGTTCCEEEECCCHHH--HHHHHHHHHHTTCEEEECCST
T ss_pred -HHhcCCCCEEEECCCchH--HHHHHHHHHHCCCEEEECCch
Confidence 2445 8999999987543 256888889999999999985
|
| >3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=97.09 E-value=0.0046 Score=61.11 Aligned_cols=130 Identities=10% Similarity=0.111 Sum_probs=75.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC--CCCCCccEEEEeCCCHHHHHHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--SHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~--~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
+..+|.|+|| |.+|..++..|+..+.. -++.+.++++++++....++.. +....+.+.. .+ .+.+
T Consensus 8 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~-----~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~---~~----~~a~ 74 (326)
T 3vku_A 8 DHQKVILVGD-GAVGSSYAYAMVLQGIA-----QEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYS---AE----YSDA 74 (326)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTCC-----SEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE---CC----GGGG
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCC-----CeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEE---Cc----HHHh
Confidence 4578999997 99999999999988721 2899999999999877766642 0011233322 12 3458
Q ss_pred cCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhh
Q 012947 87 SQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQ 166 (452)
Q Consensus 87 ~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~ 166 (452)
+++|+||.++|.....|+. ..+.+..+ ...++.+.....+.+. .++++.. +-|.|+.++.+.+.
T Consensus 75 ~~aDiVvi~ag~~~kpG~t--------R~dL~~~N--~~I~~~i~~~i~~~~p--~a~ilvv----tNPvdi~t~~~~k~ 138 (326)
T 3vku_A 75 KDADLVVITAGAPQKPGET--------RLDLVNKN--LKILKSIVDPIVDSGF--NGIFLVA----ANPVDILTYATWKL 138 (326)
T ss_dssp TTCSEEEECCCCC--------------------------CHHHHHHHHHTTTC--CSEEEEC----SSSHHHHHHHHHHH
T ss_pred cCCCEEEECCCCCCCCCch--------HHHHHHHH--HHHHHHHHHHHHhcCC--ceEEEEc----cCchHHHHHHHHHh
Confidence 8999999999965444421 11222222 2223343333333222 3344332 36889999988776
Q ss_pred c
Q 012947 167 W 167 (452)
Q Consensus 167 ~ 167 (452)
-
T Consensus 139 ~ 139 (326)
T 3vku_A 139 S 139 (326)
T ss_dssp H
T ss_pred c
Confidence 4
|
| >3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=97.09 E-value=0.0056 Score=60.35 Aligned_cols=123 Identities=9% Similarity=0.049 Sum_probs=81.1
Q ss_pred CCCeEEEEcCCchHHHHHHHHHH-HcCCCCCCCceE-EEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREAL-KLFNFPSSPIKS-LALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~-~~g~~~~~~~~~-v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
++++|.|+|+ |.+|+..++.|. +.. ..+ +++++|++++++++.++++ +..+. +| +++++
T Consensus 7 ~~~~v~iiG~-G~ig~~~~~~l~~~~~------~~~~vav~d~~~~~~~~~a~~~g------~~~~~---~~---~~~~l 67 (346)
T 3cea_A 7 KPLRAAIIGL-GRLGERHARHLVNKIQ------GVKLVAACALDSNQLEWAKNELG------VETTY---TN---YKDMI 67 (346)
T ss_dssp CCEEEEEECC-STTHHHHHHHHHHTCS------SEEEEEEECSCHHHHHHHHHTTC------CSEEE---SC---HHHHH
T ss_pred CcceEEEEcC-CHHHHHHHHHHHhcCC------CcEEEEEecCCHHHHHHHHHHhC------CCccc---CC---HHHHh
Confidence 4589999998 899999999988 433 166 5678999999988777553 21111 23 55666
Q ss_pred c--CccEEeecCCCCCCCCHHHHHHHHHhCCcEE-E--ecCcHHHHHHHHHHHHHHHHhC-ccEEEcCCCCCcchh
Q 012947 87 S--QTKLLLNCVGPYRLHGDPVAAACVHSGCDYL-D--ISGEPEFMERMEARYHEKAVET-GSLLVSACGFDSIPA 156 (452)
Q Consensus 87 ~--~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yv-D--lsge~~~~~~~~~~~~~~A~~~-gv~iv~~~G~~s~P~ 156 (452)
+ ++|+|+.|..+... ..++..|++.|.|.+ + ++....- ...+.+.++++ |+.+..+.-+...|.
T Consensus 68 ~~~~~D~V~i~tp~~~h--~~~~~~al~~G~~v~~eKp~~~~~~~----~~~l~~~a~~~~~~~~~~~~~~r~~p~ 137 (346)
T 3cea_A 68 DTENIDAIFIVAPTPFH--PEMTIYAMNAGLNVFCEKPLGLDFNE----VDEMAKVIKSHPNQIFQSGFMRRYDDS 137 (346)
T ss_dssp TTSCCSEEEECSCGGGH--HHHHHHHHHTTCEEEECSCCCSCHHH----HHHHHHHHHTCTTSCEECCCGGGTCHH
T ss_pred cCCCCCEEEEeCChHhH--HHHHHHHHHCCCEEEEcCCCCCCHHH----HHHHHHHHHhCCCCeEEEecccccCHH
Confidence 5 68999999865432 577888999998744 3 2222222 23456677888 887765444434453
|
| >3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A | Back alignment and structure |
|---|
Probab=97.09 E-value=0.0011 Score=65.79 Aligned_cols=99 Identities=15% Similarity=0.271 Sum_probs=64.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh---h---HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP---T---RVKQALQWASPSHSLSIPILTADTTDPPSLHR 84 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~---~---kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~ 84 (452)
++|.|+||||++|+.+++.|.++.. +++..+.++. + ++.++...+.. ..++.+... .+.+ +
T Consensus 5 ~kv~IvGatG~vG~~l~~~L~~~p~------~el~~l~s~~~~~saGk~~~~~~p~~~~--~~~~~v~~~--~~~~---~ 71 (337)
T 3dr3_A 5 LNTLIVGASGYAGAELVTYVNRHPH------MNITALTVSAQSNDAGKLISDLHPQLKG--IVELPLQPM--SDIS---E 71 (337)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTT------EEEEEEEEETTCTTTTSBHHHHCGGGTT--TCCCBEEEE--SSGG---G
T ss_pred eEEEEECCCChHHHHHHHHHHhCCC------CcEEEEEecCchhhcCCchHHhCccccC--ccceeEecc--CCHH---H
Confidence 6899999999999999999998642 6776554333 2 33333222210 112333222 1222 2
Q ss_pred HHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcH
Q 012947 85 LCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEP 124 (452)
Q Consensus 85 ~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~ 124 (452)
+++++|+||.|.+... ....+..+.+.|+..||+++..
T Consensus 72 ~~~~~Dvvf~a~p~~~--s~~~~~~~~~~g~~vIDlSa~f 109 (337)
T 3dr3_A 72 FSPGVDVVFLATAHEV--SHDLAPQFLEAGCVVFDLSGAF 109 (337)
T ss_dssp TCTTCSEEEECSCHHH--HHHHHHHHHHTTCEEEECSSTT
T ss_pred HhcCCCEEEECCChHH--HHHHHHHHHHCCCEEEEcCCcc
Confidence 3378999999986432 3577888899999999999874
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0012 Score=63.76 Aligned_cols=110 Identities=14% Similarity=0.217 Sum_probs=73.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
++|.|+|+ |.+|..+++.|++.| ++|.+.+|++++.+++.+. .+. . . .++.++++++|
T Consensus 2 ~~i~iIG~-G~mG~~~a~~l~~~G-------~~V~~~dr~~~~~~~~~~~-------g~~--~--~---~~~~~~~~~aD 59 (287)
T 3pef_A 2 QKFGFIGL-GIMGSAMAKNLVKAG-------CSVTIWNRSPEKAEELAAL-------GAE--R--A---ATPCEVVESCP 59 (287)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT-------CEEEEECSSGGGGHHHHHT-------TCE--E--C---SSHHHHHHHCS
T ss_pred CEEEEEee-cHHHHHHHHHHHHCC-------CeEEEEcCCHHHHHHHHHC-------CCe--e--c---CCHHHHHhcCC
Confidence 57999996 999999999999998 7999999999998877652 111 1 1 24566777899
Q ss_pred EEeecCCCCCCCCHHHH---H---HHHHhCCcEEEecCcHHHH-HHHHHHHHHHHHhCccEEEc
Q 012947 91 LLLNCVGPYRLHGDPVA---A---ACVHSGCDYLDISGEPEFM-ERMEARYHEKAVETGSLLVS 147 (452)
Q Consensus 91 vVIn~aGp~~~~~~~vv---~---ac~~~g~~yvDlsge~~~~-~~~~~~~~~~A~~~gv~iv~ 147 (452)
+||.|+.... .-..++ + .....+..+||.++..+-. +.+ .+..++.|+.++.
T Consensus 60 vvi~~vp~~~-~~~~v~~~~~~l~~~l~~~~~vi~~st~~~~~~~~~----~~~~~~~g~~~~~ 118 (287)
T 3pef_A 60 VTFAMLADPA-AAEEVCFGKHGVLEGIGEGRGYVDMSTVDPATSQRI----GVAVVAKGGRFLE 118 (287)
T ss_dssp EEEECCSSHH-HHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHH----HHHHHHTTCEEEE
T ss_pred EEEEEcCCHH-HHHHHHcCcchHhhcCCCCCEEEeCCCCCHHHHHHH----HHHHHHhCCEEEE
Confidence 9999984111 112222 1 2233567789988754433 333 3344456777665
|
| >3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum} | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0023 Score=64.27 Aligned_cols=133 Identities=13% Similarity=0.077 Sum_probs=81.6
Q ss_pred CCCCeEEEEcCCchHHHH-HH----HHHHHcCCCCC----CCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCC
Q 012947 8 PELFDVIILGASGFTGKY-VV----REALKLFNFPS----SPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTD 78 (452)
Q Consensus 8 ~~~~~ilV~GATG~iG~~-va----~~L~~~g~~~~----~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d 78 (452)
.++++|.|+|++|++|+. .+ +.+.+.+.... ....++++++|+.++.+++.++++ +..+. +|
T Consensus 4 ~~~irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~~~a~~~a~~~~------~~~~~---~~ 74 (383)
T 3oqb_A 4 TQRLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSAEKVEALAKRFN------IARWT---TD 74 (383)
T ss_dssp CEEEEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSSHHHHHHHHHTT------CCCEE---SC
T ss_pred CceeEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCHHHHHHHHHHhC------CCccc---CC
Confidence 457899999999999997 66 77766541000 000122599999999999888764 11111 33
Q ss_pred HHHHHHHHc--CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcch
Q 012947 79 PPSLHRLCS--QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIP 155 (452)
Q Consensus 79 ~~sl~~~~~--~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P 155 (452)
++++++ ++|+|+.|..+. .+ ..++.+|+++|.|.+ +-=.......-...+.+.|+++|+.+..+.-+-..|
T Consensus 75 ---~~~ll~~~~iD~V~i~tp~~-~h-~~~~~~al~~Gk~V~-~EKP~a~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p 147 (383)
T 3oqb_A 75 ---LDAALADKNDTMFFDAATTQ-AR-PGLLTQAINAGKHVY-CEKPIATNFEEALEVVKLANSKGVKHGTVQDKLFLP 147 (383)
T ss_dssp ---HHHHHHCSSCCEEEECSCSS-SS-HHHHHHHHTTTCEEE-ECSCSCSSHHHHHHHHHHHHHTTCCEEECCGGGGSH
T ss_pred ---HHHHhcCCCCCEEEECCCch-HH-HHHHHHHHHCCCeEE-EcCCCCCCHHHHHHHHHHHHHcCCeEEEEeccccCH
Confidence 556665 489999777543 33 788999999999955 311111111222445567888887654333333344
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0052 Score=60.36 Aligned_cols=83 Identities=18% Similarity=0.061 Sum_probs=55.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
++|.|+||+|++|..++..|+..+. ..++.+.++++ .+....++.. ......+... ....+++++++++|
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~-----~~ev~L~Di~~--~~~~a~dL~~-~~~~~~l~~~--~~t~d~~~a~~~aD 70 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPL-----VSRLTLYDIAH--TPGVAADLSH-IETRATVKGY--LGPEQLPDCLKGCD 70 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTT-----CSEEEEEESSS--HHHHHHHHTT-SSSSCEEEEE--ESGGGHHHHHTTCS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-----CcEEEEEeCCc--cHHHHHHHhc-cCcCceEEEe--cCCCCHHHHhCCCC
Confidence 4899999999999999999987652 14799999987 3344445532 0111111110 01245778899999
Q ss_pred EEeecCCCCCCCC
Q 012947 91 LLLNCVGPYRLHG 103 (452)
Q Consensus 91 vVIn~aGp~~~~~ 103 (452)
+||+++|.....+
T Consensus 71 vVvi~ag~~~~~g 83 (314)
T 1mld_A 71 VVVIPAGVPRKPG 83 (314)
T ss_dssp EEEECCSCCCCTT
T ss_pred EEEECCCcCCCCC
Confidence 9999999655443
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0018 Score=63.03 Aligned_cols=92 Identities=15% Similarity=0.229 Sum_probs=65.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
+..+++|+|+ |.+|+.+++.|...| .+|.+.+|+.++++.+.+ ++ +..+ + .+++++++++
T Consensus 156 ~g~~v~IiG~-G~iG~~~a~~l~~~G-------~~V~~~d~~~~~~~~~~~-~g------~~~~--~---~~~l~~~l~~ 215 (300)
T 2rir_A 156 HGSQVAVLGL-GRTGMTIARTFAALG-------ANVKVGARSSAHLARITE-MG------LVPF--H---TDELKEHVKD 215 (300)
T ss_dssp TTSEEEEECC-SHHHHHHHHHHHHTT-------CEEEEEESSHHHHHHHHH-TT------CEEE--E---GGGHHHHSTT
T ss_pred CCCEEEEEcc-cHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHH-CC------CeEE--c---hhhHHHHhhC
Confidence 4578999997 999999999999888 799999999988765443 21 2222 2 2468888999
Q ss_pred ccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecC
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISG 122 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsg 122 (452)
+|+||+++.+. ..+...++ ..+.+...||++.
T Consensus 216 aDvVi~~~p~~-~i~~~~~~-~mk~g~~lin~a~ 247 (300)
T 2rir_A 216 IDICINTIPSM-ILNQTVLS-SMTPKTLILDLAS 247 (300)
T ss_dssp CSEEEECCSSC-CBCHHHHT-TSCTTCEEEECSS
T ss_pred CCEEEECCChh-hhCHHHHH-hCCCCCEEEEEeC
Confidence 99999999752 22333222 2334566777764
|
| >3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0053 Score=60.96 Aligned_cols=123 Identities=16% Similarity=0.142 Sum_probs=82.1
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEE-EEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 012947 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 8 ~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v-~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
.++++|.|+|+ |.+|+..++.|.+... .++ ++++|+.++++++.++++ +.. .+| +++++
T Consensus 3 ~~~~~vgiiG~-G~~g~~~~~~l~~~~~------~~lvav~d~~~~~~~~~~~~~g------~~~----~~~---~~~~l 62 (354)
T 3db2_A 3 YNPVGVAAIGL-GRWAYVMADAYTKSEK------LKLVTCYSRTEDKREKFGKRYN------CAG----DAT---MEALL 62 (354)
T ss_dssp CCCEEEEEECC-SHHHHHHHHHHTTCSS------EEEEEEECSSHHHHHHHHHHHT------CCC----CSS---HHHHH
T ss_pred CCcceEEEEcc-CHHHHHHHHHHHhCCC------cEEEEEECCCHHHHHHHHHHcC------CCC----cCC---HHHHh
Confidence 34689999998 8899999998877631 664 588999999988887764 111 233 56666
Q ss_pred --cCccEEeecCCCCCCCCHHHHHHHHHhCCcEE-E--ecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchh
Q 012947 87 --SQTKLLLNCVGPYRLHGDPVAAACVHSGCDYL-D--ISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPA 156 (452)
Q Consensus 87 --~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yv-D--lsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~ 156 (452)
.++|+|+.|..+.. + ..++..|+++|.|.+ + ++-...-. ..+.+.++++|+.+..+.-+-..|.
T Consensus 63 ~~~~~D~V~i~tp~~~-h-~~~~~~al~~gk~vl~EKP~~~~~~~~----~~l~~~a~~~~~~~~v~~~~R~~p~ 131 (354)
T 3db2_A 63 AREDVEMVIITVPNDK-H-AEVIEQCARSGKHIYVEKPISVSLDHA----QRIDQVIKETGVKFLCGHSSRRLGA 131 (354)
T ss_dssp HCSSCCEEEECSCTTS-H-HHHHHHHHHTTCEEEEESSSCSSHHHH----HHHHHHHHHHCCCEEEECGGGGSHH
T ss_pred cCCCCCEEEEeCChHH-H-HHHHHHHHHcCCEEEEccCCCCCHHHH----HHHHHHHHHcCCeEEEeechhcCHH
Confidence 46899999885533 2 678889999999844 3 12222222 3445667777776554444444553
|
| >1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0056 Score=60.97 Aligned_cols=131 Identities=14% Similarity=0.055 Sum_probs=82.5
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEE-EEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 012947 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 7 ~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v-~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
+.++++|.|+|+ |.+|+..++.|.+... .++ ++++|+.++.+++.++++. ...+.. .+ +++++
T Consensus 3 ~~~~~~vgiiG~-G~ig~~~~~~l~~~~~------~~lv~v~d~~~~~~~~~a~~~~~--~~~~~~----~~---~~~~l 66 (362)
T 1ydw_A 3 TETQIRIGVMGC-ADIARKVSRAIHLAPN------ATISGVASRSLEKAKAFATANNY--PESTKI----HG---SYESL 66 (362)
T ss_dssp ---CEEEEEESC-CTTHHHHHHHHHHCTT------EEEEEEECSSHHHHHHHHHHTTC--CTTCEE----ES---SHHHH
T ss_pred CCCceEEEEECc-hHHHHHHHHHHhhCCC------cEEEEEEcCCHHHHHHHHHHhCC--CCCCee----eC---CHHHH
Confidence 445689999998 8999999999887541 554 6889999999888887641 001111 12 35566
Q ss_pred Hc--CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchh
Q 012947 86 CS--QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPA 156 (452)
Q Consensus 86 ~~--~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~ 156 (452)
++ ++|+|+.+..+.. + ..++..|+++|.|.+--. .......-...+.+.|+++|+.+..+.-+...|.
T Consensus 67 l~~~~~D~V~i~tp~~~-h-~~~~~~al~aGk~V~~EK-P~a~~~~e~~~l~~~a~~~g~~~~~~~~~r~~p~ 136 (362)
T 1ydw_A 67 LEDPEIDALYVPLPTSL-H-VEWAIKAAEKGKHILLEK-PVAMNVTEFDKIVDACEANGVQIMDGTMWVHNPR 136 (362)
T ss_dssp HHCTTCCEEEECCCGGG-H-HHHHHHHHTTTCEEEECS-SCSSSHHHHHHHHHHHHTTTCCEEECCCGGGSGG
T ss_pred hcCCCCCEEEEcCChHH-H-HHHHHHHHHCCCeEEEec-CCcCCHHHHHHHHHHHHHcCCEEEEEEeeccCHH
Confidence 65 5899999884432 3 578889999999854211 1111111234556778888887664433334453
|
| >3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0023 Score=62.29 Aligned_cols=121 Identities=9% Similarity=0.006 Sum_probs=80.6
Q ss_pred CCCeEEEEcCCchHHHH-HHHHHHHcCCCCCCCceEEE-EEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 012947 9 ELFDVIILGASGFTGKY-VVREALKLFNFPSSPIKSLA-LAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~-va~~L~~~g~~~~~~~~~v~-iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
++++|.|+|+ |.+|+. .++.|.+... .+++ +++|++++++++.++++. .. .+| +++++
T Consensus 5 ~~~~igiIG~-G~~g~~~~~~~l~~~~~------~~l~av~d~~~~~~~~~a~~~~~------~~----~~~---~~~ll 64 (308)
T 3uuw_A 5 KNIKMGMIGL-GSIAQKAYLPILTKSER------FEFVGAFTPNKVKREKICSDYRI------MP----FDS---IESLA 64 (308)
T ss_dssp CCCEEEEECC-SHHHHHHTHHHHTSCSS------SEEEEEECSCHHHHHHHHHHHTC------CB----CSC---HHHHH
T ss_pred ccCcEEEEec-CHHHHHHHHHHHHhCCC------eEEEEEECCCHHHHHHHHHHcCC------CC----cCC---HHHHH
Confidence 3589999998 888985 7887776431 5554 899999999998887641 11 344 45556
Q ss_pred cCccEEeecCCCCCCCCHHHHHHHHHhCCcEE-E--ecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcch
Q 012947 87 SQTKLLLNCVGPYRLHGDPVAAACVHSGCDYL-D--ISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIP 155 (452)
Q Consensus 87 ~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yv-D--lsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P 155 (452)
+++|+|+-|..+.. + ..++..|+++|.|.+ + ++....-. ..+.+.++++|+.+..+.-+--.|
T Consensus 65 ~~~D~V~i~tp~~~-h-~~~~~~al~~gk~vl~EKP~~~~~~~~----~~l~~~a~~~g~~~~v~~~~r~~p 130 (308)
T 3uuw_A 65 KKCDCIFLHSSTET-H-YEIIKILLNLGVHVYVDKPLASTVSQG----EELIELSTKKNLNLMVGFNRRFCP 130 (308)
T ss_dssp TTCSEEEECCCGGG-H-HHHHHHHHHTTCEEEECSSSSSSHHHH----HHHHHHHHHHTCCEEECCGGGGCH
T ss_pred hcCCEEEEeCCcHh-H-HHHHHHHHHCCCcEEEcCCCCCCHHHH----HHHHHHHHHcCCEEEEeeccccCH
Confidence 69999998875443 3 578889999999843 2 22233332 344566777787765444443445
|
| >3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A* | Back alignment and structure |
|---|
Probab=97.02 E-value=0.003 Score=62.80 Aligned_cols=122 Identities=16% Similarity=0.107 Sum_probs=81.8
Q ss_pred CCCeEEEEcCCchHHH-HHHHHHHHcCCCCCCCceEE-EEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 012947 9 ELFDVIILGASGFTGK-YVVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~-~va~~L~~~g~~~~~~~~~v-~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
++++|.|+|+ |.+|+ ..++.|.+... .++ ++++|+.++++++.++++ +... .++++++
T Consensus 26 ~~~rigiIG~-G~~g~~~~~~~l~~~~~------~~l~av~d~~~~~~~~~a~~~g------~~~~-------~~~~~ll 85 (350)
T 3rc1_A 26 NPIRVGVIGC-ADIAWRRALPALEAEPL------TEVTAIASRRWDRAKRFTERFG------GEPV-------EGYPALL 85 (350)
T ss_dssp CCEEEEEESC-CHHHHHTHHHHHHHCTT------EEEEEEEESSHHHHHHHHHHHC------SEEE-------ESHHHHH
T ss_pred CceEEEEEcC-cHHHHHHHHHHHHhCCC------eEEEEEEcCCHHHHHHHHHHcC------CCCc-------CCHHHHh
Confidence 4689999997 88998 78888887631 665 588999999998888763 2322 2356666
Q ss_pred c--CccEEeecCCCCCCCCHHHHHHHHHhCCcEE-E--ecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchh
Q 012947 87 S--QTKLLLNCVGPYRLHGDPVAAACVHSGCDYL-D--ISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPA 156 (452)
Q Consensus 87 ~--~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yv-D--lsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~ 156 (452)
+ ++|+|+-|..+. .+ ..++.+|+++|.|.+ + ++....-. ..+.+.++++|+.+..+.-+--.|.
T Consensus 86 ~~~~~D~V~i~tp~~-~h-~~~~~~al~aGk~Vl~EKP~a~~~~ea----~~l~~~a~~~g~~~~v~~~~R~~p~ 154 (350)
T 3rc1_A 86 ERDDVDAVYVPLPAV-LH-AEWIDRALRAGKHVLAEKPLTTDRPQA----ERLFAVARERGLLLMENFMFLHHPQ 154 (350)
T ss_dssp TCTTCSEEEECCCGG-GH-HHHHHHHHHTTCEEEEESSSCSSHHHH----HHHHHHHHHTTCCEEEECGGGGCTH
T ss_pred cCCCCCEEEECCCcH-HH-HHHHHHHHHCCCcEEEeCCCCCCHHHH----HHHHHHHHHhCCEEEEEecccCCHH
Confidence 5 589999887443 23 678889999999844 2 22222222 3445678888887654433334453
|
| >1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0065 Score=60.10 Aligned_cols=136 Identities=8% Similarity=0.045 Sum_probs=79.7
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCce-EEEEEecChhHHHHHHHHhCC---CCCCCccEEEEeCCCHHHH
Q 012947 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIK-SLALAGRNPTRVKQALQWASP---SHSLSIPILTADTTDPPSL 82 (452)
Q Consensus 7 ~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~-~v~iagR~~~kl~~l~~~l~~---~~~~~v~~v~~Dl~d~~sl 82 (452)
..++++|.|+|| |.+|..++..|+..+ + +|.+.++++++++....++.. .......+... +| +
T Consensus 6 ~~~~~kI~VIGa-G~vG~~lA~~la~~g-------~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t--~d---~ 72 (331)
T 1pzg_A 6 VQRRKKVAMIGS-GMIGGTMGYLCALRE-------LADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE--YS---Y 72 (331)
T ss_dssp CSCCCEEEEECC-SHHHHHHHHHHHHHT-------CCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE--CS---H
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCC-------CCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEe--CC---H
Confidence 334579999999 999999999999987 4 899999999888764333310 00111122211 23 5
Q ss_pred HHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecC-cHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHH
Q 012947 83 HRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISG-EPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVM 161 (452)
Q Consensus 83 ~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsg-e~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~ 161 (452)
++.++++|+||.++|.....+. +.| +....|+.. .....+.+.....+.+ ..++++. .+-|.++.++
T Consensus 73 ~ea~~~aDiVi~a~g~p~~~g~---~~~---~~~r~dl~~~n~~i~~~i~~~i~~~~--p~a~vi~----~tNP~~~~t~ 140 (331)
T 1pzg_A 73 EAALTGADCVIVTAGLTKVPGK---PDS---EWSRNDLLPFNSKIIREIGQNIKKYC--PKTFIIV----VTNPLDCMVK 140 (331)
T ss_dssp HHHHTTCSEEEECCSCSSCTTC---CGG---GCCGGGGHHHHHHHHHHHHHHHHHHC--TTCEEEE----CCSSHHHHHH
T ss_pred HHHhCCCCEEEEccCCCCCCCc---ccC---CCCHHHHHHHHHHHHHHHHHHHHHHC--CCcEEEE----EcCchHHHHH
Confidence 5578999999999986544432 000 000111110 1223344444444333 2444443 2568888888
Q ss_pred HHhhhc
Q 012947 162 FNSRQW 167 (452)
Q Consensus 162 ~~~~~~ 167 (452)
.+.+..
T Consensus 141 ~~~~~~ 146 (331)
T 1pzg_A 141 VMCEAS 146 (331)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 876664
|
| >4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0013 Score=69.83 Aligned_cols=102 Identities=14% Similarity=0.088 Sum_probs=72.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh-------------------hHHHHHHHHhCCCCCCCcc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-------------------TRVKQALQWASPSHSLSIP 70 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~-------------------~kl~~l~~~l~~~~~~~v~ 70 (452)
..+|+|+|+ |.+|..++++|++.|. -++.+++++. .|.+.+++.+.. ..+.+.
T Consensus 326 ~arVLIVGa-GGLGs~vA~~La~aGV------G~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~-iNP~V~ 397 (615)
T 4gsl_A 326 NTKVLLLGA-GTLGCYVSRALIAWGV------RKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKR-IFPLMD 397 (615)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTC------CEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHH-HCTTCE
T ss_pred CCeEEEECC-CHHHHHHHHHHHHcCC------CEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHh-hCCCcE
Confidence 568999999 7789999999999984 5888888753 455555544432 123444
Q ss_pred EEEEe--C--------------CCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEe
Q 012947 71 ILTAD--T--------------TDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDI 120 (452)
Q Consensus 71 ~v~~D--l--------------~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDl 120 (452)
+...+ + .+.+.+.++++++|+||+|...+.. ...+.++|.+.++.+|+.
T Consensus 398 v~~~~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tDn~~t-R~~ln~~c~~~~~PlI~a 462 (615)
T 4gsl_A 398 ATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRES-RWLPSLLSNIENKTVINA 462 (615)
T ss_dssp EEEECCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSGGG-THHHHHHHHHTTCEEEEE
T ss_pred EEEeeccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCCCHHH-HHHHHHHHHHcCCeEEEE
Confidence 44332 2 1335677888999999999875543 367889999999988875
|
| >1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5 | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0037 Score=61.11 Aligned_cols=121 Identities=13% Similarity=0.088 Sum_probs=80.3
Q ss_pred CCCeEEEEcCCchHHHH-HHHHHHHcCCCCCCCceEEE-EEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 012947 9 ELFDVIILGASGFTGKY-VVREALKLFNFPSSPIKSLA-LAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~-va~~L~~~g~~~~~~~~~v~-iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
++++|.|+|+ |.+|+. +++.|.+... .+++ +++|+.++.+++.++++ +. -.+|.+.+ .
T Consensus 4 ~~~~vgiiG~-G~~g~~~~~~~l~~~~~------~~lvav~d~~~~~~~~~~~~~g------~~----~~~~~~~l---~ 63 (319)
T 1tlt_A 4 KKLRIGVVGL-GGIAQKAWLPVLAAASD------WTLQGAWSPTRAKALPICESWR------IP----YADSLSSL---A 63 (319)
T ss_dssp -CEEEEEECC-STHHHHTHHHHHHSCSS------EEEEEEECSSCTTHHHHHHHHT------CC----BCSSHHHH---H
T ss_pred CcceEEEECC-CHHHHHHHHHHHHhCCC------eEEEEEECCCHHHHHHHHHHcC------CC----ccCcHHHh---h
Confidence 3578999998 899986 8888876431 6654 89999999988887763 22 13455555 4
Q ss_pred cCccEEeecCCCCCCCCHHHHHHHHHhCCc-EEE--ecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcch
Q 012947 87 SQTKLLLNCVGPYRLHGDPVAAACVHSGCD-YLD--ISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIP 155 (452)
Q Consensus 87 ~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~-yvD--lsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P 155 (452)
.++|+|+.+..+.. + ..++..|+++|.| +++ ++....- ...+.+.++++|+.+..+.-+-..|
T Consensus 64 ~~~D~V~i~tp~~~-h-~~~~~~al~~G~~v~~eKP~~~~~~~----~~~l~~~a~~~g~~~~~~~~~r~~p 129 (319)
T 1tlt_A 64 ASCDAVFVHSSTAS-H-FDVVSTLLNAGVHVCVDKPLAENLRD----AERLVELAARKKLTLMVGFNRRFAP 129 (319)
T ss_dssp TTCSEEEECSCTTH-H-HHHHHHHHHTTCEEEEESSSCSSHHH----HHHHHHHHHHTTCCEEEECGGGGCH
T ss_pred cCCCEEEEeCCchh-H-HHHHHHHHHcCCeEEEeCCCCCCHHH----HHHHHHHHHHcCCeEEEeeecccCH
Confidence 68999998875432 2 5788889999997 444 1222222 2445677888887765444343445
|
| >4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0063 Score=59.73 Aligned_cols=120 Identities=14% Similarity=0.135 Sum_probs=82.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEE-EEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLA-LAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~-iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
.++|.|+|+ |.+|+..++.|.+... .+++ +++|++++++++.++++ +. .+| ++++++
T Consensus 3 ~~~vgiiG~-G~~g~~~~~~l~~~~~------~~l~av~d~~~~~~~~~~~~~~------~~-----~~~---~~~~l~~ 61 (331)
T 4hkt_A 3 TVRFGLLGA-GRIGKVHAKAVSGNAD------ARLVAVADAFPAAAEAIAGAYG------CE-----VRT---IDAIEAA 61 (331)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHCTT------EEEEEEECSSHHHHHHHHHHTT------CE-----ECC---HHHHHHC
T ss_pred ceEEEEECC-CHHHHHHHHHHhhCCC------cEEEEEECCCHHHHHHHHHHhC------CC-----cCC---HHHHhcC
Confidence 368999998 8999999999988641 6654 78999999988887653 22 234 555665
Q ss_pred -CccEEeecCCCCCCCCHHHHHHHHHhCCcEE-E--ecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchh
Q 012947 88 -QTKLLLNCVGPYRLHGDPVAAACVHSGCDYL-D--ISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPA 156 (452)
Q Consensus 88 -~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yv-D--lsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~ 156 (452)
++|+|+.|..+.. + ..++..|+++|.|.+ + ++-...-. ..+.+.++++|+.+..+.-+-..|.
T Consensus 62 ~~~D~V~i~tp~~~-h-~~~~~~al~~gk~v~~EKP~~~~~~~~----~~l~~~a~~~g~~~~v~~~~r~~p~ 128 (331)
T 4hkt_A 62 ADIDAVVICTPTDT-H-ADLIERFARAGKAIFCEKPIDLDAERV----RACLKVVSDTKAKLMVGFNRRFDPH 128 (331)
T ss_dssp TTCCEEEECSCGGG-H-HHHHHHHHHTTCEEEECSCSCSSHHHH----HHHHHHHHHTTCCEEECCGGGGCHH
T ss_pred CCCCEEEEeCCchh-H-HHHHHHHHHcCCcEEEecCCCCCHHHH----HHHHHHHHHcCCeEEEcccccCCHH
Confidence 7899999885433 2 678889999998844 2 22222222 4446678888887665444444553
|
| >1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0064 Score=59.79 Aligned_cols=130 Identities=12% Similarity=0.083 Sum_probs=73.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCC--CCCCccEEEEeCCCHHHHHHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS--HSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~--~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
++++|.|+|| |++|..++-.|+..+. .-++.+.++++++++....++... ...++.+. .++ .+.+
T Consensus 6 ~~~KI~IiGa-G~vG~~~a~~l~~~~~-----~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~---~~~----~~a~ 72 (318)
T 1y6j_A 6 SRSKVAIIGA-GFVGASAAFTMALRQT-----ANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY---AGD----YSDV 72 (318)
T ss_dssp -CCCEEEECC-SHHHHHHHHHHHHTTC-----SSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----C----GGGG
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC-----CCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE---ECC----HHHh
Confidence 3578999998 9999999999998872 128999999998877666666420 01122222 123 3458
Q ss_pred cCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhh
Q 012947 87 SQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQ 166 (452)
Q Consensus 87 ~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~ 166 (452)
+++|+||.++|.....+..-.+.... ....++.+.....+. ..+++++.. +.|-|+.++.+.+.
T Consensus 73 ~~aDvVii~~g~p~k~g~~r~dl~~~----------n~~i~~~i~~~i~~~--~p~a~viv~----tNPv~~~~~~~~k~ 136 (318)
T 1y6j_A 73 KDCDVIVVTAGANRKPGETRLDLAKK----------NVMIAKEVTQNIMKY--YNHGVILVV----SNPVDIITYMIQKW 136 (318)
T ss_dssp TTCSEEEECCCC------CHHHHHHH----------HHHHHHHHHHHHHHH--CCSCEEEEC----SSSHHHHHHHHHHH
T ss_pred CCCCEEEEcCCCCCCCCcCHHHHHHh----------hHHHHHHHHHHHHHh--CCCcEEEEe----cCcHHHHHHHHHHH
Confidence 99999999998654444211111111 122334443333333 235555542 56889999888776
Q ss_pred c
Q 012947 167 W 167 (452)
Q Consensus 167 ~ 167 (452)
-
T Consensus 137 s 137 (318)
T 1y6j_A 137 S 137 (318)
T ss_dssp H
T ss_pred c
Confidence 4
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0019 Score=64.52 Aligned_cols=74 Identities=15% Similarity=0.154 Sum_probs=60.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+|+|+|+ |.+|..+++.+...| .+|++.+|++++++.+.++++. . ...|..+.+.+.++..++
T Consensus 188 g~~VlV~Ga-G~vG~~~~q~a~~~G-------a~Vi~~~~~~~~~~~~~~~lGa------~-~v~~~~~~~~~~~~~~~~ 252 (366)
T 1yqd_A 188 GKHIGIVGL-GGLGHVAVKFAKAFG-------SKVTVISTSPSKKEEALKNFGA------D-SFLVSRDQEQMQAAAGTL 252 (366)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTT-------CEEEEEESCGGGHHHHHHTSCC------S-EEEETTCHHHHHHTTTCE
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHhcCC------c-eEEeccCHHHHHHhhCCC
Confidence 357999997 999999999988887 7999999999998776656641 2 235777877788777789
Q ss_pred cEEeecCCC
Q 012947 90 KLLLNCVGP 98 (452)
Q Consensus 90 dvVIn~aGp 98 (452)
|+||+|+|.
T Consensus 253 D~vid~~g~ 261 (366)
T 1yqd_A 253 DGIIDTVSA 261 (366)
T ss_dssp EEEEECCSS
T ss_pred CEEEECCCc
Confidence 999999984
|
| >4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A* | Back alignment and structure |
|---|
Probab=96.98 E-value=0.00075 Score=67.72 Aligned_cols=102 Identities=19% Similarity=0.259 Sum_probs=63.2
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEE-ecCh--hHHHHHHHH-hCCCCC---CCccEEEEeCCCHH
Q 012947 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRNP--TRVKQALQW-ASPSHS---LSIPILTADTTDPP 80 (452)
Q Consensus 8 ~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~ia-gR~~--~kl~~l~~~-l~~~~~---~~v~~v~~Dl~d~~ 80 (452)
++.++|-|+|||||+|+.+.+.|.++.. .++..+ .|+. .++.+.... +..... .+..+. ++ +++
T Consensus 5 ~~~~kVaIvGATGyvG~eLlrlL~~hP~------~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~--~~-~~~ 75 (359)
T 4dpl_A 5 RRTLKAAILGATGLVGIEYVRMLSNHPY------IKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIK--PT-DPK 75 (359)
T ss_dssp -CCEEEEETTTTSTTHHHHHHHHTTCSS------EEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCE--EC-CGG
T ss_pred CCCCeEEEECCCCHHHHHHHHHHHhCCC------ceEEEEECchhcCCChhHhcccccccccccccccceEE--eC-CHH
Confidence 3568999999999999999998877642 566544 4432 233322100 000000 012222 22 223
Q ss_pred HHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcH
Q 012947 81 SLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEP 124 (452)
Q Consensus 81 sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~ 124 (452)
+ ++++|+||.|.|... ....+....+.|+..||+++..
T Consensus 76 ~----~~~vDvvf~a~p~~~--s~~~a~~~~~~G~~vIDlSa~~ 113 (359)
T 4dpl_A 76 L----MDDVDIIFSPLPQGA--AGPVEEQFAKEGFPVISNSPDH 113 (359)
T ss_dssp G----CTTCCEEEECCCTTT--HHHHHHHHHHTTCEEEECSSTT
T ss_pred H----hcCCCEEEECCChHH--HHHHHHHHHHCCCEEEEcCCCc
Confidence 3 368999999987543 3678888899999999999864
|
| >4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A* | Back alignment and structure |
|---|
Probab=96.98 E-value=0.00075 Score=67.72 Aligned_cols=102 Identities=19% Similarity=0.259 Sum_probs=63.2
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEE-ecCh--hHHHHHHHH-hCCCCC---CCccEEEEeCCCHH
Q 012947 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRNP--TRVKQALQW-ASPSHS---LSIPILTADTTDPP 80 (452)
Q Consensus 8 ~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~ia-gR~~--~kl~~l~~~-l~~~~~---~~v~~v~~Dl~d~~ 80 (452)
++.++|-|+|||||+|+.+.+.|.++.. .++..+ .|+. .++.+.... +..... .+..+. ++ +++
T Consensus 5 ~~~~kVaIvGATGyvG~eLlrlL~~hP~------~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~--~~-~~~ 75 (359)
T 4dpk_A 5 RRTLKAAILGATGLVGIEYVRMLSNHPY------IKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIK--PT-DPK 75 (359)
T ss_dssp -CCEEEEETTTTSTTHHHHHHHHTTCSS------EEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCE--EC-CGG
T ss_pred CCCCeEEEECCCCHHHHHHHHHHHhCCC------ceEEEEECchhcCCChhHhcccccccccccccccceEE--eC-CHH
Confidence 3568999999999999999998877642 566544 4432 233322100 000000 012222 22 223
Q ss_pred HHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcH
Q 012947 81 SLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEP 124 (452)
Q Consensus 81 sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~ 124 (452)
+ ++++|+||.|.|... ....+....+.|+..||+++..
T Consensus 76 ~----~~~vDvvf~a~p~~~--s~~~a~~~~~~G~~vIDlSa~~ 113 (359)
T 4dpk_A 76 L----MDDVDIIFSPLPQGA--AGPVEEQFAKEGFPVISNSPDH 113 (359)
T ss_dssp G----CTTCCEEEECCCTTT--HHHHHHHHHHTTCEEEECSSTT
T ss_pred H----hcCCCEEEECCChHH--HHHHHHHHHHCCCEEEEcCCCc
Confidence 3 368999999987543 3678888899999999999864
|
| >3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A* | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0043 Score=63.74 Aligned_cols=131 Identities=15% Similarity=0.141 Sum_probs=87.0
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceE-EEEEecChhHHHHHHHHh-CCCCCCCccEEEEe---------
Q 012947 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKS-LALAGRNPTRVKQALQWA-SPSHSLSIPILTAD--------- 75 (452)
Q Consensus 7 ~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~-v~iagR~~~kl~~l~~~l-~~~~~~~v~~v~~D--------- 75 (452)
+.++++|-|+|+ |.+|+..++.+.+.. ..+ +++++|+.+++++..+++ +. ...+..+|
T Consensus 20 ~~k~IRVGIIGa-G~iG~~~~~~l~~~~------~veLvAV~D~~~era~~~a~~~yG~----~~~~~~~~~~~~i~~a~ 88 (446)
T 3upl_A 20 TGKPIRIGLIGA-GEMGTDIVTQVARMQ------GIEVGALSARRLPNTFKAIRTAYGD----EENAREATTESAMTRAI 88 (446)
T ss_dssp TTCCEEEEEECC-SHHHHHHHHHHTTSS------SEEEEEEECSSTHHHHHHHHHHHSS----STTEEECSSHHHHHHHH
T ss_pred cCCceEEEEECC-hHHHHHHHHHHhhCC------CcEEEEEEeCCHHHHHHHHHHhcCC----ccccccccchhhhhhhh
Confidence 446799999998 899999999877643 144 577899999998887654 31 01111110
Q ss_pred ----CCCHHHHHHHHc--CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCC
Q 012947 76 ----TTDPPSLHRLCS--QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSAC 149 (452)
Q Consensus 76 ----l~d~~sl~~~~~--~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~ 149 (452)
..-.++.+++++ ++|+||.+.+... ....++..|+++|.|.+-.+ ..........+.+.|+++|+.+..+.
T Consensus 89 ~~g~~~v~~D~eeLL~d~dIDaVviaTp~p~-~H~e~a~~AL~AGKHVv~~n--k~l~~~eg~eL~~~A~e~Gvvl~~~~ 165 (446)
T 3upl_A 89 EAGKIAVTDDNDLILSNPLIDVIIDATGIPE-VGAETGIAAIRNGKHLVMMN--VEADVTIGPYLKAQADKQGVIYSLGA 165 (446)
T ss_dssp HTTCEEEESCHHHHHTCTTCCEEEECSCCHH-HHHHHHHHHHHTTCEEEECC--HHHHHHHHHHHHHHHHHHTCCEEECT
T ss_pred ccCCceEECCHHHHhcCCCCCEEEEcCCChH-HHHHHHHHHHHcCCcEEecC--cccCHHHHHHHHHHHHHhCCeeeecC
Confidence 000123566666 5899999986432 23578999999999977433 33333334667788999999877766
Q ss_pred CC
Q 012947 150 GF 151 (452)
Q Consensus 150 G~ 151 (452)
|-
T Consensus 166 gd 167 (446)
T 3upl_A 166 GD 167 (446)
T ss_dssp TS
T ss_pred Cc
Confidence 53
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0021 Score=63.30 Aligned_cols=74 Identities=9% Similarity=0.036 Sum_probs=54.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHH---HHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPP---SLHRLC 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~---sl~~~~ 86 (452)
..+|+|+||+|.+|..+++.+...| .+|++.+|++++++. +++++. . ...|..+++ .+.+..
T Consensus 149 g~~vlV~Ga~g~iG~~~~~~a~~~G-------a~Vi~~~~~~~~~~~-~~~~ga------~-~~~~~~~~~~~~~~~~~~ 213 (334)
T 3qwb_A 149 GDYVLLFAAAGGVGLILNQLLKMKG-------AHTIAVASTDEKLKI-AKEYGA------E-YLINASKEDILRQVLKFT 213 (334)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHTT-------CEEEEEESSHHHHHH-HHHTTC------S-EEEETTTSCHHHHHHHHT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHH-HHHcCC------c-EEEeCCCchHHHHHHHHh
Confidence 4579999999999999999998888 799999999999874 455531 2 234555533 333333
Q ss_pred c--CccEEeecCCC
Q 012947 87 S--QTKLLLNCVGP 98 (452)
Q Consensus 87 ~--~~dvVIn~aGp 98 (452)
. +.|+||+|+|.
T Consensus 214 ~~~g~D~vid~~g~ 227 (334)
T 3qwb_A 214 NGKGVDASFDSVGK 227 (334)
T ss_dssp TTSCEEEEEECCGG
T ss_pred CCCCceEEEECCCh
Confidence 2 58999999984
|
| >3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0075 Score=59.32 Aligned_cols=123 Identities=14% Similarity=0.056 Sum_probs=83.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEE-EEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLA-LAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~-iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
++++|.|+|+ |.+|+..++.|.+... .+++ +++|+.++++++.++++. .. . . .+++++++
T Consensus 4 ~~~~igiiG~-G~~g~~~~~~l~~~~~------~~l~av~d~~~~~~~~~~~~~~~---~~--~----~---~~~~~ll~ 64 (330)
T 3e9m_A 4 DKIRYGIMST-AQIVPRFVAGLRESAQ------AEVRGIASRRLENAQKMAKELAI---PV--A----Y---GSYEELCK 64 (330)
T ss_dssp CCEEEEECSC-CTTHHHHHHHHHHSSS------EEEEEEBCSSSHHHHHHHHHTTC---CC--C----B---SSHHHHHH
T ss_pred CeEEEEEECc-hHHHHHHHHHHHhCCC------cEEEEEEeCCHHHHHHHHHHcCC---Cc--e----e---CCHHHHhc
Confidence 4579999997 8999999999988642 6654 789999999888887631 00 0 1 23566666
Q ss_pred --CccEEeecCCCCCCCCHHHHHHHHHhCCcEEE---ecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchh
Q 012947 88 --QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLD---ISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPA 156 (452)
Q Consensus 88 --~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvD---lsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~ 156 (452)
++|+|+.|..+.. + ..++..|+++|.|.+- ++....- ...+.+.++++|+.+..+.-+-..|.
T Consensus 65 ~~~~D~V~i~tp~~~-h-~~~~~~al~~gk~vl~EKP~~~~~~e----~~~l~~~a~~~g~~~~v~~~~r~~p~ 132 (330)
T 3e9m_A 65 DETIDIIYIPTYNQG-H-YSAAKLALSQGKPVLLEKPFTLNAAE----AEELFAIAQEQGVFLMEAQKSVFLPI 132 (330)
T ss_dssp CTTCSEEEECCCGGG-H-HHHHHHHHHTTCCEEECSSCCSSHHH----HHHHHHHHHHTTCCEEECCSGGGCHH
T ss_pred CCCCCEEEEcCCCHH-H-HHHHHHHHHCCCeEEEeCCCCCCHHH----HHHHHHHHHHcCCeEEEEEhhhhCHH
Confidence 7899998885443 2 5788899999998542 2222222 24456778888887765555555554
|
| >1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0078 Score=59.22 Aligned_cols=130 Identities=12% Similarity=0.156 Sum_probs=77.5
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC--CCCCCccEEEEeCCCHHHHHHH
Q 012947 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--SHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 8 ~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~--~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
.+.++|.|+|| |.+|..++-.|+..+. .-++.+.++++++++....++.. +...++.+. .| + .+.
T Consensus 3 ~~~~KI~IiGa-G~vG~~~a~~l~~~~~-----~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~-~~--~----~~a 69 (318)
T 1ez4_A 3 PNHQKVVLVGD-GAVGSSYAFAMAQQGI-----AEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIY-SG--E----YSD 69 (318)
T ss_dssp TTBCEEEEECC-SHHHHHHHHHHHHHTC-----CSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEE-EC--C----GGG
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHcCCC-----CCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEE-EC--C----HHH
Confidence 34579999999 9999999999998862 13899999999998876666532 011233333 22 3 345
Q ss_pred HcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEec-CcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHh
Q 012947 86 CSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS-GEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNS 164 (452)
Q Consensus 86 ~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDls-ge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~ 164 (452)
++++|+||.++|.....|+. ..|+- -....++.+.....+.+ ..++++.. +-|-|+.++.+.
T Consensus 70 ~~~aDvVii~ag~~~~~g~~-----------R~dl~~~n~~i~~~i~~~i~~~~--p~a~iiv~----tNPv~~~t~~~~ 132 (318)
T 1ez4_A 70 CKDADLVVITAGAPQKPGES-----------RLDLVNKNLNILSSIVKPVVDSG--FDGIFLVA----ANPVDILTYATW 132 (318)
T ss_dssp GTTCSEEEECCCC---------------------CHHHHHHHHHHHHHHHHHTT--CCSEEEEC----SSSHHHHHHHHH
T ss_pred hCCCCEEEECCCCCCCCCCC-----------HHHHHHHHHHHHHHHHHHHHHhC--CCeEEEEe----CCcHHHHHHHHH
Confidence 88999999999865444421 11110 01223333333332222 24454442 578999999888
Q ss_pred hhc
Q 012947 165 RQW 167 (452)
Q Consensus 165 ~~~ 167 (452)
+.-
T Consensus 133 k~s 135 (318)
T 1ez4_A 133 KFS 135 (318)
T ss_dssp HHH
T ss_pred HHc
Confidence 874
|
| >3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0015 Score=69.22 Aligned_cols=102 Identities=14% Similarity=0.086 Sum_probs=71.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC-------------------hhHHHHHHHHhCCCCCCCcc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASPSHSLSIP 70 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~-------------------~~kl~~l~~~l~~~~~~~v~ 70 (452)
..+|+|+|+ |.+|..++++|++.|. -++.+++.+ ..|.+.+++.+.. ..+.+.
T Consensus 327 ~~kVLIVGa-GGLGs~va~~La~aGV------G~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~-iNP~v~ 398 (598)
T 3vh1_A 327 NTKVLLLGA-GTLGCYVSRALIAWGV------RKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKR-IFPLMD 398 (598)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHTTTC------CEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHH-HCTTCE
T ss_pred CCeEEEECC-CHHHHHHHHHHHHcCC------CEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHh-HCCCcE
Confidence 468999998 7789999999999984 588888543 2466555555532 013444
Q ss_pred EEEE--eC--------------CCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEe
Q 012947 71 ILTA--DT--------------TDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDI 120 (452)
Q Consensus 71 ~v~~--Dl--------------~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDl 120 (452)
+... ++ .+.+.+.+++++.|+||+|..-+.. ...+.++|.+.++.+|+.
T Consensus 399 v~~~~~~I~~pgh~i~~~~~~~l~~~~l~~li~~~DvVvdatDn~~t-R~lin~~c~~~~~plI~a 463 (598)
T 3vh1_A 399 ATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRES-RWLPSLLSNIENKTVINA 463 (598)
T ss_dssp EEEECCCCCCSSCCCCSHHHHHHHHHHHHHHHHHCSEEEECCSBGGG-THHHHHHHHHTTCEEEEE
T ss_pred EEEEeccccccCcccccccccccCHHHHHHHHhcCCEEEECCCCHHH-HHHHHHHHHhcCCCEEEE
Confidence 4333 32 1346678889999999999865443 367889999998888764
|
| >2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0076 Score=59.53 Aligned_cols=130 Identities=10% Similarity=0.086 Sum_probs=78.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC--CCCCCccEEEEeCCCHHHHHHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--SHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~--~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
+.++|.|+|| |.+|..++-.|+..+. .-++.+.++++++++....++.. +...++.+. . .+ .+.+
T Consensus 8 ~~~KI~IiGa-G~vG~~la~~l~~~~~-----~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~--~~----~~a~ 74 (326)
T 2zqz_A 8 DHQKVILVGD-GAVGSSYAYAMVLQGI-----AQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIY-S--AE----YSDA 74 (326)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTC-----CSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEE-E--CC----GGGG
T ss_pred CCCEEEEECC-CHHHHHHHHHHHcCCC-----CCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEE-E--CC----HHHh
Confidence 3479999999 9999999999988762 13899999999999877666632 011223333 2 23 4458
Q ss_pred cCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhh
Q 012947 87 SQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQ 166 (452)
Q Consensus 87 ~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~ 166 (452)
+++|+||.++|.....|+.-.+...+ ....++.+.....+.+ ..++++.. +-|-|+.++.+.+.
T Consensus 75 ~~aDvVii~ag~~~k~g~~R~dl~~~----------n~~i~~~i~~~i~~~~--p~a~iiv~----tNPv~~~t~~~~k~ 138 (326)
T 2zqz_A 75 KDADLVVITAGAPQKPGETRLDLVNK----------NLKILKSIVDPIVDSG--FNGIFLVA----ANPVDILTYATWKL 138 (326)
T ss_dssp GGCSEEEECCCCC-----CHHHHHHH----------HHHHHHHHHHHHHHHT--CCSEEEEC----SSSHHHHHHHHHHH
T ss_pred CCCCEEEEcCCCCCCCCCCHHHHHHH----------HHHHHHHHHHHHHHHC--CCeEEEEe----CCcHHHHHHHHHHH
Confidence 89999999998755554321111111 1223344433333332 34454442 57889999888777
Q ss_pred c
Q 012947 167 W 167 (452)
Q Consensus 167 ~ 167 (452)
-
T Consensus 139 s 139 (326)
T 2zqz_A 139 S 139 (326)
T ss_dssp H
T ss_pred c
Confidence 4
|
| >1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A* | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0048 Score=60.10 Aligned_cols=129 Identities=13% Similarity=0.112 Sum_probs=75.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC---CCCCCccEEEEeCCCHHHHHHHHc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP---SHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~---~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
|+|.|+|| |.+|..++..|+..+.. -++.+.++++++++....++.. .......+... +| .+.++
T Consensus 1 MkI~ViGa-G~vG~~la~~l~~~~~~-----~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d----~~a~~ 68 (294)
T 1oju_A 1 MKLGFVGA-GRVGSTSAFTCLLNLDV-----DEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--AD----YSLLK 68 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCC-----SEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SC----GGGGT
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCC-----CeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CC----HHHhC
Confidence 57999999 99999999999988720 2899999999987643332210 01112223222 23 45788
Q ss_pred CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhhc
Q 012947 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQW 167 (452)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~~ 167 (452)
++|+||.++|.....|+.-.+.... ....++.+.....+.+ ..++++.- +-|-|+.++.+.+.-
T Consensus 69 ~aDiVViaag~~~kpG~~R~dl~~~----------N~~i~~~i~~~i~~~~--p~a~iivv----sNPvd~~t~~~~k~~ 132 (294)
T 1oju_A 69 GSEIIVVTAGLARKPGMTRLDLAHK----------NAGIIKDIAKKIVENA--PESKILVV----TNPMDVMTYIMWKES 132 (294)
T ss_dssp TCSEEEECCCCCCCSSCCHHHHHHH----------HHHHHHHHHHHHHTTS--TTCEEEEC----SSSHHHHHHHHHHHS
T ss_pred CCCEEEECCCCCCCCCCcHHHHHHH----------HHHHHHHHHHHHHhhC--CCeEEEEe----CCcchHHHHHHHHhc
Confidence 9999999999655554321111111 1222333333322221 23343322 368899999887753
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.003 Score=62.79 Aligned_cols=74 Identities=9% Similarity=0.071 Sum_probs=54.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH---H
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL---C 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~---~ 86 (452)
..+|+|+||+|.+|..+++.+...| .+|++.+|++++++.+. +++. . ...|.++.+..+.+ .
T Consensus 168 g~~VlV~Gg~g~iG~~~~~~a~~~G-------a~Vi~~~~~~~~~~~~~-~lGa------~-~~~~~~~~~~~~~~~~~~ 232 (353)
T 4dup_A 168 GESVLIHGGTSGIGTTAIQLARAFG-------AEVYATAGSTGKCEACE-RLGA------K-RGINYRSEDFAAVIKAET 232 (353)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTT-------CEEEEEESSHHHHHHHH-HHTC------S-EEEETTTSCHHHHHHHHH
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHH-hcCC------C-EEEeCCchHHHHHHHHHh
Confidence 4579999999999999999999888 79999999999986554 4542 2 23465554332222 2
Q ss_pred -cCccEEeecCCC
Q 012947 87 -SQTKLLLNCVGP 98 (452)
Q Consensus 87 -~~~dvVIn~aGp 98 (452)
.+.|+||+|+|.
T Consensus 233 ~~g~Dvvid~~g~ 245 (353)
T 4dup_A 233 GQGVDIILDMIGA 245 (353)
T ss_dssp SSCEEEEEESCCG
T ss_pred CCCceEEEECCCH
Confidence 268999999983
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0026 Score=62.40 Aligned_cols=74 Identities=18% Similarity=0.094 Sum_probs=55.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHH---HHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPP---SLHRLC 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~---sl~~~~ 86 (452)
..+|+|+||+|.+|..+++.+...| .+|++.+|++++++.+. +++. . ...|.++.+ .+.+..
T Consensus 141 g~~VlV~Ga~g~iG~~~~~~a~~~G-------a~Vi~~~~~~~~~~~~~-~~Ga------~-~~~~~~~~~~~~~~~~~~ 205 (325)
T 3jyn_A 141 GEIILFHAAAGGVGSLACQWAKALG-------AKLIGTVSSPEKAAHAK-ALGA------W-ETIDYSHEDVAKRVLELT 205 (325)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHHT-------CEEEEEESSHHHHHHHH-HHTC------S-EEEETTTSCHHHHHHHHT
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHH-HcCC------C-EEEeCCCccHHHHHHHHh
Confidence 4579999999999999999999888 79999999999987554 5541 1 234555543 333333
Q ss_pred c--CccEEeecCCC
Q 012947 87 S--QTKLLLNCVGP 98 (452)
Q Consensus 87 ~--~~dvVIn~aGp 98 (452)
. ++|+||+|+|.
T Consensus 206 ~~~g~Dvvid~~g~ 219 (325)
T 3jyn_A 206 DGKKCPVVYDGVGQ 219 (325)
T ss_dssp TTCCEEEEEESSCG
T ss_pred CCCCceEEEECCCh
Confidence 2 68999999984
|
| >3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0082 Score=58.99 Aligned_cols=130 Identities=12% Similarity=0.182 Sum_probs=79.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC--CCC-CCccEEEEeCCCHHHHHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--SHS-LSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~--~~~-~~v~~v~~Dl~d~~sl~~~ 85 (452)
++++|.|+|| |.+|..++..|+..+. ..++.+.++++++++....++.. +.. .++.+. . ++ .+.
T Consensus 5 ~~~KI~IIGa-G~vG~~la~~l~~~~~-----~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~-~--~~----~~a 71 (317)
T 3d0o_A 5 KGNKVVLIGN-GAVGSSYAFSLVNQSI-----VDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVK-A--GE----YSD 71 (317)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHCS-----CSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEE-E--CC----GGG
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC-----CCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEE-e--CC----HHH
Confidence 4579999999 9999999999998762 13899999999887754444321 001 223333 2 23 445
Q ss_pred HcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhh
Q 012947 86 CSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSR 165 (452)
Q Consensus 86 ~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~ 165 (452)
++++|+||.++|.....+..-.+.... ....++.+.....+. ..+++++.. +-|-|+.++.+.+
T Consensus 72 ~~~aDvVvi~ag~~~~~g~~r~dl~~~----------n~~i~~~i~~~i~~~--~p~a~viv~----tNPv~~~t~~~~k 135 (317)
T 3d0o_A 72 CHDADLVVICAGAAQKPGETRLDLVSK----------NLKIFKSIVGEVMAS--KFDGIFLVA----TNPVDILAYATWK 135 (317)
T ss_dssp GTTCSEEEECCCCCCCTTCCHHHHHHH----------HHHHHHHHHHHHHHT--TCCSEEEEC----SSSHHHHHHHHHH
T ss_pred hCCCCEEEECCCCCCCCCCcHHHHHHH----------HHHHHHHHHHHHHHh--CCCcEEEEe----cCcHHHHHHHHHH
Confidence 889999999998765554321111111 122333333333322 234555542 4788999998877
Q ss_pred hc
Q 012947 166 QW 167 (452)
Q Consensus 166 ~~ 167 (452)
.-
T Consensus 136 ~~ 137 (317)
T 3d0o_A 136 FS 137 (317)
T ss_dssp HH
T ss_pred Hh
Confidence 74
|
| >1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A* | Back alignment and structure |
|---|
Probab=96.85 E-value=0.007 Score=59.43 Aligned_cols=130 Identities=15% Similarity=0.176 Sum_probs=77.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC--C-CCCCccEEEEeCCCHHHHHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--S-HSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~--~-~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
..++|.|+|| |.+|..++..|+..+. ..++.+.++++++++....++.. + ....+.+. . ++ .+.
T Consensus 5 ~~~kI~IIGa-G~vG~sla~~l~~~~~-----~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~-~--~~----~~a 71 (316)
T 1ldn_A 5 GGARVVVIGA-GFVGASYVFALMNQGI-----ADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIW-H--GD----YDD 71 (316)
T ss_dssp TSCEEEEECC-SHHHHHHHHHHHHHTC-----CSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEE-E--CC----GGG
T ss_pred CCCEEEEECc-CHHHHHHHHHHHhCCC-----CCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEE-c--Cc----HHH
Confidence 3468999999 9999999999988762 13899999999877655444421 0 11133333 2 23 245
Q ss_pred HcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhh
Q 012947 86 CSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSR 165 (452)
Q Consensus 86 ~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~ 165 (452)
++++|+||.++|+....+..-.+...+ .....+.+.....+.+ ..+..++. +-|-|+.++.+.+
T Consensus 72 l~~aDvViia~~~~~~~g~~r~dl~~~----------n~~i~~~i~~~i~~~~-p~a~~iv~-----tNPv~~~~~~~~~ 135 (316)
T 1ldn_A 72 CRDADLVVICAGANQKPGETRLDLVDK----------NIAIFRSIVESVMASG-FQGLFLVA-----TNPVDILTYATWK 135 (316)
T ss_dssp TTTCSEEEECCSCCCCTTTCSGGGHHH----------HHHHHHHHHHHHHHHT-CCSEEEEC-----SSSHHHHHHHHHH
T ss_pred hCCCCEEEEcCCCCCCCCCCHHHHHHc----------ChHHHHHHHHHHHHHC-CCCEEEEe-----CCchHHHHHHHHH
Confidence 889999999998765554211110000 1223334433333333 22333432 3488999988877
Q ss_pred hc
Q 012947 166 QW 167 (452)
Q Consensus 166 ~~ 167 (452)
.-
T Consensus 136 ~s 137 (316)
T 1ldn_A 136 FS 137 (316)
T ss_dssp HH
T ss_pred Hh
Confidence 64
|
| >1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0014 Score=64.75 Aligned_cols=89 Identities=15% Similarity=0.042 Sum_probs=68.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-HcC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQ 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~-~~~ 88 (452)
+.+++|+|+ |.+|+.+++.|.+++ . +.++++++++.+ +.+ .++.++.+|.+|++.++++ +++
T Consensus 115 ~~~viI~G~-G~~g~~l~~~L~~~g-------~-v~vid~~~~~~~-~~~-------~~~~~i~gd~~~~~~L~~a~i~~ 177 (336)
T 1lnq_A 115 SRHVVICGW-SESTLECLRELRGSE-------V-FVLAEDENVRKK-VLR-------SGANFVHGDPTRVSDLEKANVRG 177 (336)
T ss_dssp -CEEEEESC-CHHHHHHHTTGGGSC-------E-EEEESCGGGHHH-HHH-------TTCEEEESCTTSHHHHHHTCSTT
T ss_pred cCCEEEECC-cHHHHHHHHHHHhCC-------c-EEEEeCChhhhh-HHh-------CCcEEEEeCCCCHHHHHhcChhh
Confidence 357999997 999999999998887 8 999999999987 543 2578999999999999988 889
Q ss_pred ccEEeecCCCCCCCCHHHHHHHHHhCCc
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACVHSGCD 116 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~~~g~~ 116 (452)
+|.||.+.+.- .....++..+.+.+.+
T Consensus 178 a~~vi~~~~~d-~~n~~~~~~ar~~~~~ 204 (336)
T 1lnq_A 178 ARAVIVDLESD-SETIHCILGIRKIDES 204 (336)
T ss_dssp EEEEEECCSSH-HHHHHHHHHHHTTCTT
T ss_pred ccEEEEcCCcc-HHHHHHHHHHHHHCCC
Confidence 99999887532 1122344455555543
|
| >3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri} | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0022 Score=61.92 Aligned_cols=112 Identities=14% Similarity=0.164 Sum_probs=71.2
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
+.++|.|+|+ |.+|+.+++.|.+.+ ++|.+.+|++++++.+.+. .+. . .++ +.+++++
T Consensus 3 ~~~~i~iiG~-G~~G~~~a~~l~~~g-------~~V~~~~~~~~~~~~~~~~-------g~~--~--~~~---~~~~~~~ 60 (301)
T 3cky_A 3 KSIKIGFIGL-GAMGKPMAINLLKEG-------VTVYAFDLMEANVAAVVAQ-------GAQ--A--CEN---NQKVAAA 60 (301)
T ss_dssp -CCEEEEECC-CTTHHHHHHHHHHTT-------CEEEEECSSHHHHHHHHTT-------TCE--E--CSS---HHHHHHH
T ss_pred CCCEEEEECc-cHHHHHHHHHHHHCC-------CeEEEEeCCHHHHHHHHHC-------CCe--e--cCC---HHHHHhC
Confidence 4578999995 999999999999987 7899999999988776542 221 1 223 4556678
Q ss_pred ccEEeecCCCCCCCCHHHHH------HHHHhCCcEEEecCcHH-HHHHHHHHHHHHHHhCccEEEc
Q 012947 89 TKLLLNCVGPYRLHGDPVAA------ACVHSGCDYLDISGEPE-FMERMEARYHEKAVETGSLLVS 147 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~------ac~~~g~~yvDlsge~~-~~~~~~~~~~~~A~~~gv~iv~ 147 (452)
+|+||.|+...... ..++. .+...++..||++.-.+ -.+.+ .+...+.++.++.
T Consensus 61 ~D~vi~~vp~~~~~-~~v~~~~~~l~~~l~~~~~vv~~~~~~~~~~~~l----~~~~~~~g~~~~~ 121 (301)
T 3cky_A 61 SDIIFTSLPNAGIV-ETVMNGPGGVLSACKAGTVIVDMSSVSPSSTLKM----AKVAAEKGIDYVD 121 (301)
T ss_dssp CSEEEECCSSHHHH-HHHHHSTTCHHHHSCTTCEEEECCCCCHHHHHHH----HHHHHHTTCEEEE
T ss_pred CCEEEEECCCHHHH-HHHHcCcchHhhcCCCCCEEEECCCCCHHHHHHH----HHHHHHcCCeEEE
Confidence 99999998421111 22331 22345677888875543 33333 2333345666664
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0032 Score=62.36 Aligned_cols=74 Identities=14% Similarity=0.171 Sum_probs=55.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHc-CCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHH---HHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKL-FNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPS---LHRL 85 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~-g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~s---l~~~ 85 (452)
..+++|+||+|.+|..+++.+... | .+|++.+|++++++.+ ++++. . ...|..+.+. +.++
T Consensus 171 g~~vlV~Gagg~iG~~~~~~a~~~~G-------a~Vi~~~~~~~~~~~~-~~~g~------~-~~~~~~~~~~~~~~~~~ 235 (347)
T 1jvb_A 171 TKTLLVVGAGGGLGTMAVQIAKAVSG-------ATIIGVDVREEAVEAA-KRAGA------D-YVINASMQDPLAEIRRI 235 (347)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTC-------CEEEEEESSHHHHHHH-HHHTC------S-EEEETTTSCHHHHHHHH
T ss_pred CCEEEEECCCccHHHHHHHHHHHcCC-------CeEEEEcCCHHHHHHH-HHhCC------C-EEecCCCccHHHHHHHH
Confidence 357999999999999999999998 8 7899999999998665 44531 2 2346655433 4555
Q ss_pred H--cCccEEeecCCC
Q 012947 86 C--SQTKLLLNCVGP 98 (452)
Q Consensus 86 ~--~~~dvVIn~aGp 98 (452)
. .+.|+||+|+|.
T Consensus 236 ~~~~~~d~vi~~~g~ 250 (347)
T 1jvb_A 236 TESKGVDAVIDLNNS 250 (347)
T ss_dssp TTTSCEEEEEESCCC
T ss_pred hcCCCceEEEECCCC
Confidence 4 368999999984
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0031 Score=62.28 Aligned_cols=73 Identities=15% Similarity=0.158 Sum_probs=55.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHH---HHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPP---SLHRLC 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~---sl~~~~ 86 (452)
..+++|+||+|.+|..+++.+...| .+|++.+|++++++.+. +++. .. ..|.++++ .+.++.
T Consensus 167 g~~vlV~Gasg~iG~~~~~~a~~~G-------~~Vi~~~~~~~~~~~~~-~~ga------~~-~~d~~~~~~~~~~~~~~ 231 (343)
T 2eih_A 167 GDDVLVMAAGSGVSVAAIQIAKLFG-------ARVIATAGSEDKLRRAK-ALGA------DE-TVNYTHPDWPKEVRRLT 231 (343)
T ss_dssp TCEEEECSTTSTTHHHHHHHHHHTT-------CEEEEEESSHHHHHHHH-HHTC------SE-EEETTSTTHHHHHHHHT
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHH-hcCC------CE-EEcCCcccHHHHHHHHh
Confidence 4579999999999999999998888 79999999999987654 4531 22 35776543 344443
Q ss_pred c--CccEEeecCC
Q 012947 87 S--QTKLLLNCVG 97 (452)
Q Consensus 87 ~--~~dvVIn~aG 97 (452)
. +.|+||+++|
T Consensus 232 ~~~~~d~vi~~~g 244 (343)
T 2eih_A 232 GGKGADKVVDHTG 244 (343)
T ss_dssp TTTCEEEEEESSC
T ss_pred CCCCceEEEECCC
Confidence 2 6899999998
|
| >3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0086 Score=58.14 Aligned_cols=112 Identities=18% Similarity=0.048 Sum_probs=68.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
.++|.|+|+ |.+|..+++.|++.| ++|.+.+|++++++.+.+. ....... ++.++++++
T Consensus 7 ~~~I~iIG~-G~mG~~~a~~l~~~G-------~~V~~~dr~~~~~~~~~~~-------g~~~~~~------~~~e~~~~a 65 (303)
T 3g0o_A 7 DFHVGIVGL-GSMGMGAARSCLRAG-------LSTWGADLNPQACANLLAE-------GACGAAA------SAREFAGVV 65 (303)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTT-------CEEEEECSCHHHHHHHHHT-------TCSEEES------SSTTTTTTC
T ss_pred CCeEEEECC-CHHHHHHHHHHHHCC-------CeEEEEECCHHHHHHHHHc-------CCccccC------CHHHHHhcC
Confidence 468999985 999999999999998 7999999999999887652 1121111 233456678
Q ss_pred cEEeecCCCCCCCCHHHH---H---HHHHhCCcEEEecCcHHHH-HHHHHHHHHHHHhCccEEEc
Q 012947 90 KLLLNCVGPYRLHGDPVA---A---ACVHSGCDYLDISGEPEFM-ERMEARYHEKAVETGSLLVS 147 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv---~---ac~~~g~~yvDlsge~~~~-~~~~~~~~~~A~~~gv~iv~ 147 (452)
|+||.|+...... ..++ + .....+..+||.+...+-. +.+ .+..++.|+.++.
T Consensus 66 Dvvi~~vp~~~~~-~~v~~~~~~l~~~l~~g~ivv~~st~~~~~~~~~----~~~~~~~g~~~~~ 125 (303)
T 3g0o_A 66 DALVILVVNAAQV-RQVLFGEDGVAHLMKPGSAVMVSSTISSADAQEI----AAALTALNLNMLD 125 (303)
T ss_dssp SEEEECCSSHHHH-HHHHC--CCCGGGSCTTCEEEECSCCCHHHHHHH----HHHHHTTTCEEEE
T ss_pred CEEEEECCCHHHH-HHHHhChhhHHhhCCCCCEEEecCCCCHHHHHHH----HHHHHHcCCeEEe
Confidence 8888887421100 1111 0 1122456678877544332 222 2334445666554
|
| >3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=96.78 E-value=0.011 Score=58.15 Aligned_cols=128 Identities=11% Similarity=0.072 Sum_probs=79.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCce-EEEEEecChhHHHHHHHHhCCC---CCCCccEEEEeCCCHHHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIK-SLALAGRNPTRVKQALQWASPS---HSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~-~v~iagR~~~kl~~l~~~l~~~---~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
.++|.|+|| |.+|..++..|+..+ + ++.+.++++++++....++... ......+... +| .+.
T Consensus 5 ~~kI~iiGa-G~vG~~~a~~l~~~~-------~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t--~d----~~a 70 (321)
T 3p7m_A 5 RKKITLVGA-GNIGGTLAHLALIKQ-------LGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGT--ND----YKD 70 (321)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTT-------CCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SC----GGG
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCC-------CceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEc--CC----HHH
Confidence 368999996 999999999999887 4 8999999999887666555310 0112333322 23 247
Q ss_pred HcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhh
Q 012947 86 CSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSR 165 (452)
Q Consensus 86 ~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~ 165 (452)
++++|+||.++|.....|+.-.+.... ....++.+.....+.+ ..++++.. +-|.|+.++.+.+
T Consensus 71 ~~~aDvVIi~ag~p~k~G~~R~dl~~~----------N~~i~~~i~~~i~~~~--p~a~vivv----tNPvd~~t~~~~k 134 (321)
T 3p7m_A 71 LENSDVVIVTAGVPRKPGMSRDDLLGI----------NIKVMQTVGEGIKHNC--PNAFVICI----TNPLDIMVNMLQK 134 (321)
T ss_dssp GTTCSEEEECCSCCCCTTCCHHHHHHH----------HHHHHHHHHHHHHHHC--TTCEEEEC----CSSHHHHHHHHHH
T ss_pred HCCCCEEEEcCCcCCCCCCCHHHHHHH----------hHHHHHHHHHHHHHHC--CCcEEEEe----cCchHHHHHHHHH
Confidence 889999999999665555321111111 1233444444444443 23343322 4688999988876
Q ss_pred hc
Q 012947 166 QW 167 (452)
Q Consensus 166 ~~ 167 (452)
.-
T Consensus 135 ~s 136 (321)
T 3p7m_A 135 FS 136 (321)
T ss_dssp HH
T ss_pred hc
Confidence 63
|
| >2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens} | Back alignment and structure |
|---|
Probab=96.77 E-value=0.016 Score=56.66 Aligned_cols=120 Identities=12% Similarity=0.014 Sum_probs=78.4
Q ss_pred CeEEEEcCCchHHHHH-HHHHHHcCCCCCCCceE-EEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 11 FDVIILGASGFTGKYV-VREALKLFNFPSSPIKS-LALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~v-a~~L~~~g~~~~~~~~~-v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
++|.|+|+ |.+|+.. ++.|.+.+ .+ +++++|+.++.+++.++++. . .. .+| ++++++
T Consensus 1 ~~vgiiG~-G~~g~~~~~~~l~~~~-------~~~vav~d~~~~~~~~~~~~~g~---~--~~----~~~---~~~~l~~ 60 (332)
T 2glx_A 1 NRWGLIGA-STIAREWVIGAIRATG-------GEVVSMMSTSAERGAAYATENGI---G--KS----VTS---VEELVGD 60 (332)
T ss_dssp CEEEEESC-CHHHHHTHHHHHHHTT-------CEEEEEECSCHHHHHHHHHHTTC---S--CC----BSC---HHHHHTC
T ss_pred CeEEEEcc-cHHHHHhhhHHhhcCC-------CeEEEEECCCHHHHHHHHHHcCC---C--cc----cCC---HHHHhcC
Confidence 47899997 8899997 78887732 55 45889999999888877631 0 00 223 556665
Q ss_pred -CccEEeecCCCCCCCCHHHHHHHHHhCCcEE-E--ecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchh
Q 012947 88 -QTKLLLNCVGPYRLHGDPVAAACVHSGCDYL-D--ISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPA 156 (452)
Q Consensus 88 -~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yv-D--lsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~ 156 (452)
++|+|+.+..+... ..++..|+++|.|.+ + ++....-. ..+.+.++++|+.+..+.-+...|.
T Consensus 61 ~~~D~V~i~tp~~~h--~~~~~~al~~Gk~v~~ekP~~~~~~~~----~~l~~~a~~~g~~~~~~~~~r~~p~ 127 (332)
T 2glx_A 61 PDVDAVYVSTTNELH--REQTLAAIRAGKHVLCEKPLAMTLEDA----REMVVAAREAGVVLGTNHHLRNAAA 127 (332)
T ss_dssp TTCCEEEECSCGGGH--HHHHHHHHHTTCEEEECSSSCSSHHHH----HHHHHHHHHHTCCEEECCCGGGSHH
T ss_pred CCCCEEEEeCChhHh--HHHHHHHHHCCCeEEEeCCCcCCHHHH----HHHHHHHHHcCCEEEEeehhhcCHH
Confidence 58999999865432 578888999999744 3 22222222 3445667777877654444444553
|
| >4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0051 Score=61.58 Aligned_cols=114 Identities=13% Similarity=0.032 Sum_probs=73.2
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
+.++|.|+|. |.+|..+++.|++.| ++|.+.+|++++++++.+. .+. ...+.+++.+-+++
T Consensus 21 ~~mkIgiIGl-G~mG~~~A~~L~~~G-------~~V~v~dr~~~~~~~l~~~-------g~~----~~~s~~e~~~~a~~ 81 (358)
T 4e21_A 21 QSMQIGMIGL-GRMGADMVRRLRKGG-------HECVVYDLNVNAVQALERE-------GIA----GARSIEEFCAKLVK 81 (358)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHTT-------CEEEEECSCHHHHHHHHTT-------TCB----CCSSHHHHHHHSCS
T ss_pred cCCEEEEECc-hHHHHHHHHHHHhCC-------CEEEEEeCCHHHHHHHHHC-------CCE----EeCCHHHHHhcCCC
Confidence 4578999985 999999999999998 8999999999998877642 111 12344433333334
Q ss_pred ccEEeecCCCCCCCCHHHHHHHH---HhCCcEEEecCcHHHH-HHHHHHHHHHHHhCccEEEc
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACV---HSGCDYLDISGEPEFM-ERMEARYHEKAVETGSLLVS 147 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~---~~g~~yvDlsge~~~~-~~~~~~~~~~A~~~gv~iv~ 147 (452)
+|+||.|+.+. .-..+++... ..+..+||.+...+-. +++ .+..++.|+.++.
T Consensus 82 ~DvVi~~vp~~--~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~----~~~l~~~g~~~vd 138 (358)
T 4e21_A 82 PRVVWLMVPAA--VVDSMLQRMTPLLAANDIVIDGGNSHYQDDIRR----ADQMRAQGITYVD 138 (358)
T ss_dssp SCEEEECSCGG--GHHHHHHHHGGGCCTTCEEEECSSCCHHHHHHH----HHHHHTTTCEEEE
T ss_pred CCEEEEeCCHH--HHHHHHHHHHhhCCCCCEEEeCCCCChHHHHHH----HHHHHHCCCEEEe
Confidence 49999998654 2234444332 2356788887655432 332 3344556776653
|
| >1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A* | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0053 Score=60.52 Aligned_cols=133 Identities=8% Similarity=0.064 Sum_probs=76.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC---CCCCCccEEEEeCCCHHHHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP---SHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~---~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
.++|.|+|| |.+|..++..|+..+. .+|.+.++++++++....++.. .......+... +| . +.+
T Consensus 4 ~~kI~VIGa-G~vG~~ia~~la~~g~------~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t--~d---~-~al 70 (322)
T 1t2d_A 4 KAKIVLVGS-GMIGGVMATLIVQKNL------GDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS--NT---Y-DDL 70 (322)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTC------CEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE--CC---G-GGG
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC------CeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC--CC---H-HHh
Confidence 468999998 9999999999999871 3799999999888765544421 00112223221 23 3 458
Q ss_pred cCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecC-cHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhh
Q 012947 87 SQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISG-EPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSR 165 (452)
Q Consensus 87 ~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsg-e~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~ 165 (452)
+++|+||.++|....++..--+ +. ..|+.. .....+.+.....+.+ ..++++.. +-|.++.++.+.+
T Consensus 71 ~~aD~Vi~a~g~p~k~g~~~qe-----~~-r~dl~~~n~~i~~~i~~~i~~~~--p~a~iiv~----tNP~~~~t~~~~~ 138 (322)
T 1t2d_A 71 AGADVVIVTAGFTKAPGKSDKE-----WN-RDDLLPLNNKIMIEIGGHIKKNC--PNAFIIVV----TNPVDVMVQLLHQ 138 (322)
T ss_dssp TTCSEEEECCSCSSCTTCCSTT-----CC-GGGGHHHHHHHHHHHHHHHHHHC--TTSEEEEC----SSSHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCCCCCCCccc-----cc-HHHHHHHHHHHHHHHHHHHHHHC--CCeEEEEe----cCChHHHHHHHHH
Confidence 8999999999865444310000 00 011100 1123344444444433 34444432 4588888877766
Q ss_pred hc
Q 012947 166 QW 167 (452)
Q Consensus 166 ~~ 167 (452)
..
T Consensus 139 ~~ 140 (322)
T 1t2d_A 139 HS 140 (322)
T ss_dssp HH
T ss_pred hc
Confidence 53
|
| >1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5 | Back alignment and structure |
|---|
Probab=96.73 E-value=0.021 Score=56.41 Aligned_cols=131 Identities=12% Similarity=0.102 Sum_probs=84.5
Q ss_pred CCCCCCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEE-EEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHH
Q 012947 3 AQSQIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPS 81 (452)
Q Consensus 3 ~~~~~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v-~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~s 81 (452)
+-+++.++++|.|+|+.+.+|+..++.|.+.++ ..++ ++++|++++++++.++++ +..+ .+|
T Consensus 11 ~~~~~~~~irvgiIG~G~~~g~~~~~~l~~~~~-----~~~lvav~d~~~~~~~~~a~~~~------~~~~---~~~--- 73 (340)
T 1zh8_A 11 HHMKPLRKIRLGIVGCGIAARELHLPALKNLSH-----LFEITAVTSRTRSHAEEFAKMVG------NPAV---FDS--- 73 (340)
T ss_dssp -----CCCEEEEEECCSHHHHHTHHHHHHTTTT-----TEEEEEEECSSHHHHHHHHHHHS------SCEE---ESC---
T ss_pred cccCCCCceeEEEEecCHHHHHHHHHHHHhCCC-----ceEEEEEEcCCHHHHHHHHHHhC------CCcc---cCC---
Confidence 345566789999999855899999999887632 1565 789999999998888773 1111 123
Q ss_pred HHHHHc--CccEEeecCCCCCCCCHHHHHHHHHhCCc-EEEe--cCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchh
Q 012947 82 LHRLCS--QTKLLLNCVGPYRLHGDPVAAACVHSGCD-YLDI--SGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPA 156 (452)
Q Consensus 82 l~~~~~--~~dvVIn~aGp~~~~~~~vv~ac~~~g~~-yvDl--sge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~ 156 (452)
++++++ ++|+|+-|..+.. + ..++.+|+++|.| ++.= +-...- ..++.+.|+++|+.+..+.-+-..|.
T Consensus 74 ~~~ll~~~~vD~V~i~tp~~~-H-~~~~~~al~aGkhVl~EKPla~~~~e----a~~l~~~a~~~g~~~~v~~~~R~~p~ 147 (340)
T 1zh8_A 74 YEELLESGLVDAVDLTLPVEL-N-LPFIEKALRKGVHVICEKPISTDVET----GKKVVELSEKSEKTVYIAENFRHVPA 147 (340)
T ss_dssp HHHHHHSSCCSEEEECCCGGG-H-HHHHHHHHHTTCEEEEESSSSSSHHH----HHHHHHHHHHCSSCEEEECGGGGCHH
T ss_pred HHHHhcCCCCCEEEEeCCchH-H-HHHHHHHHHCCCcEEEeCCCCCCHHH----HHHHHHHHHHcCCeEEEEecccCCHH
Confidence 566665 5899999885433 3 6788999999997 4431 122222 24456678888887654443444553
|
| >2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0024 Score=60.40 Aligned_cols=88 Identities=16% Similarity=0.260 Sum_probs=62.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
.++|.|+| .|.+|+.+++.|.+.+ .+|.+.+|++++++++.++++ +.. ..| ++++++++
T Consensus 3 ~m~i~iiG-~G~mG~~~a~~l~~~g-------~~v~~~~~~~~~~~~~~~~~g------~~~----~~~---~~~~~~~~ 61 (259)
T 2ahr_A 3 AMKIGIIG-VGKMASAIIKGLKQTP-------HELIISGSSLERSKEIAEQLA------LPY----AMS---HQDLIDQV 61 (259)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHTTSS-------CEEEEECSSHHHHHHHHHHHT------CCB----CSS---HHHHHHTC
T ss_pred ccEEEEEC-CCHHHHHHHHHHHhCC-------CeEEEECCCHHHHHHHHHHcC------CEe----eCC---HHHHHhcC
Confidence 36899999 5999999999999877 689999999999988876653 111 223 45567799
Q ss_pred cEEeecCCCCCCCCHHHHHHHHHhCCcEEEec
Q 012947 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDls 121 (452)
|+||.|+.+... ..+++.. ..+..+|+.+
T Consensus 62 D~Vi~~v~~~~~--~~v~~~l-~~~~~vv~~~ 90 (259)
T 2ahr_A 62 DLVILGIKPQLF--ETVLKPL-HFKQPIISMA 90 (259)
T ss_dssp SEEEECSCGGGH--HHHHTTS-CCCSCEEECC
T ss_pred CEEEEEeCcHhH--HHHHHHh-ccCCEEEEeC
Confidence 999999964321 2333322 2455677774
|
| >2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=96.71 E-value=0.00098 Score=66.36 Aligned_cols=95 Identities=19% Similarity=0.185 Sum_probs=61.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEE-ecC-hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRN-PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~ia-gR~-~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
.++|.|.||||++|+.+++.|.+++.+ ..+++.+ +|+ ..+. + .+ ....+...|. |++. ++
T Consensus 6 ~~kV~IiGAtG~iG~~llr~L~~~~~~----~~elv~i~s~~~~g~~--~--~~-----~g~~i~~~~~-~~~~----~~ 67 (340)
T 2hjs_A 6 PLNVAVVGATGSVGEALVGLLDERDFP----LHRLHLLASAESAGQR--M--GF-----AESSLRVGDV-DSFD----FS 67 (340)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCC----CSCEEEEECTTTTTCE--E--EE-----TTEEEECEEG-GGCC----GG
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCC----cEEEEEEecCCCCCCc--c--cc-----CCcceEEecC-CHHH----hc
Confidence 368999999999999999999865421 1455444 432 2110 0 01 0112222233 2221 46
Q ss_pred CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcH
Q 012947 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEP 124 (452)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~ 124 (452)
++|+||.|.|.+. ....++.+.+.|+..||+++..
T Consensus 68 ~~DvV~~a~g~~~--s~~~a~~~~~aG~kvId~Sa~~ 102 (340)
T 2hjs_A 68 SVGLAFFAAAAEV--SRAHAERARAAGCSVIDLSGAL 102 (340)
T ss_dssp GCSEEEECSCHHH--HHHHHHHHHHTTCEEEETTCTT
T ss_pred CCCEEEEcCCcHH--HHHHHHHHHHCCCEEEEeCCCC
Confidence 8999999997543 3678888999999999999864
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=96.70 E-value=0.006 Score=59.87 Aligned_cols=112 Identities=13% Similarity=0.139 Sum_probs=73.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
.++|.|+|+ |.+|..+++.|++.| ++|.+.+|++++++++.+. .+. .. .+++++++++
T Consensus 31 ~~~I~iIG~-G~mG~~~a~~l~~~G-------~~V~~~dr~~~~~~~l~~~-------g~~--~~-----~~~~e~~~~a 88 (320)
T 4dll_A 31 ARKITFLGT-GSMGLPMARRLCEAG-------YALQVWNRTPARAASLAAL-------GAT--IH-----EQARAAARDA 88 (320)
T ss_dssp CSEEEEECC-TTTHHHHHHHHHHTT-------CEEEEECSCHHHHHHHHTT-------TCE--EE-----SSHHHHHTTC
T ss_pred CCEEEEECc-cHHHHHHHHHHHhCC-------CeEEEEcCCHHHHHHHHHC-------CCE--ee-----CCHHHHHhcC
Confidence 468999987 999999999999998 7999999999998877642 121 11 2466778899
Q ss_pred cEEeecCCCCCCCCHHHHH-----HHHHhCCcEEEecCcHHHH-HHHHHHHHHHHHhCccEEEcC
Q 012947 90 KLLLNCVGPYRLHGDPVAA-----ACVHSGCDYLDISGEPEFM-ERMEARYHEKAVETGSLLVSA 148 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~-----ac~~~g~~yvDlsge~~~~-~~~~~~~~~~A~~~gv~iv~~ 148 (452)
|+||.|+..... -..++. .....+..+||.+...+-. +.+ .+..++.|+.++.+
T Consensus 89 DvVi~~vp~~~~-~~~v~~~~~~~~~l~~~~~vi~~st~~~~~~~~~----~~~~~~~g~~~~~~ 148 (320)
T 4dll_A 89 DIVVSMLENGAV-VQDVLFAQGVAAAMKPGSLFLDMASITPREARDH----AARLGALGIAHLDT 148 (320)
T ss_dssp SEEEECCSSHHH-HHHHHTTTCHHHHCCTTCEEEECSCCCHHHHHHH----HHHHHHTTCEEEEC
T ss_pred CEEEEECCCHHH-HHHHHcchhHHhhCCCCCEEEecCCCCHHHHHHH----HHHHHHcCCEEEeC
Confidence 999998842111 112221 1223566789988764433 333 33344567766643
|
| >3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0013 Score=62.58 Aligned_cols=68 Identities=15% Similarity=0.173 Sum_probs=52.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceE-EEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKS-LALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~-v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
.++|.|+|+ |.+|+.+++.|.+.+ ++ |.+.+|++++++++.+.++ +.. . .+ +++++++
T Consensus 10 ~m~i~iiG~-G~mG~~~a~~l~~~g-------~~~v~~~~~~~~~~~~~~~~~g------~~~--~--~~---~~~~~~~ 68 (266)
T 3d1l_A 10 DTPIVLIGA-GNLATNLAKALYRKG-------FRIVQVYSRTEESARELAQKVE------AEY--T--TD---LAEVNPY 68 (266)
T ss_dssp GCCEEEECC-SHHHHHHHHHHHHHT-------CCEEEEECSSHHHHHHHHHHTT------CEE--E--SC---GGGSCSC
T ss_pred CCeEEEEcC-CHHHHHHHHHHHHCC-------CeEEEEEeCCHHHHHHHHHHcC------Cce--e--CC---HHHHhcC
Confidence 478999997 999999999999987 56 8899999999988777542 221 1 12 3345678
Q ss_pred ccEEeecCCC
Q 012947 89 TKLLLNCVGP 98 (452)
Q Consensus 89 ~dvVIn~aGp 98 (452)
+|+||.++.+
T Consensus 69 ~Dvvi~av~~ 78 (266)
T 3d1l_A 69 AKLYIVSLKD 78 (266)
T ss_dssp CSEEEECCCH
T ss_pred CCEEEEecCH
Confidence 9999999843
|
| >3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A* | Back alignment and structure |
|---|
Probab=96.70 E-value=0.03 Score=55.73 Aligned_cols=123 Identities=15% Similarity=0.131 Sum_probs=82.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEE-E-EecChhHHHHHHHHhCCCCCCCccEEEEeCCC----------
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLA-L-AGRNPTRVKQALQWASPSHSLSIPILTADTTD---------- 78 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~-i-agR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d---------- 78 (452)
.+|.|+|+||-||+..++-+.++ + . ++|. + +++|.+++.+..++++. + .+...|-.+
T Consensus 4 k~i~ILGsTGSIG~~tldVi~~~-~-~----~~vvaL~a~~n~~~l~~q~~~f~p----~-~v~v~~~~~~~~~l~~~~~ 72 (376)
T 3a06_A 4 RTLVILGATGSIGTQTLDVLKKV-K-G----IRLIGISFHSNLELAFKIVKEFNV----K-NVAITGDVEFEDSSINVWK 72 (376)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHS-C-S----EEEEEEEESSCHHHHHHHHHHHTC----C-EEEECSSCCCCCSSSEEEE
T ss_pred ceEEEECCCCHHHHHHHHHHHhC-C-C----eEEEEEEccCCHHHHHHHHHHcCC----C-EEEEccHHHHHHHHHHHcc
Confidence 57999999999999999998887 2 1 6654 3 68999999999888852 2 122333222
Q ss_pred -HHHHHHHHc--CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcC
Q 012947 79 -PPSLHRLCS--QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSA 148 (452)
Q Consensus 79 -~~sl~~~~~--~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~ 148 (452)
++.+.+++. .+|+|+++.- ...|..-.-+++++|.|..=.+=|.....- +...+.++++|+.|++.
T Consensus 73 G~~~l~el~~~~~~D~Vv~Aiv--G~aGL~ptlaAi~aGK~vaLANKEsLV~aG--~li~~~a~~~g~~llPV 141 (376)
T 3a06_A 73 GSHSIEEMLEALKPDITMVAVS--GFSGLRAVLASLEHSKRVCLANKESLVCGG--FLVKKKLKEKGTELIPV 141 (376)
T ss_dssp STTHHHHHHHHHCCSEEEECCC--STTHHHHHHHHHHHCSEEEECCSHHHHHHH--HHHHHHHHHHCCEEEEC
T ss_pred CHHHHHHHhcCCCCCEEEEEee--CHHHHHHHHHHHHCCCEEEEeChHHHHhhH--HHHHHHHHHcCCEEEEE
Confidence 245566664 6899999852 234456666778888776654444433322 33456678889988764
|
| >2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A* | Back alignment and structure |
|---|
Probab=96.68 E-value=0.0065 Score=58.95 Aligned_cols=111 Identities=14% Similarity=0.150 Sum_probs=73.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
++.+|.|.|+||.+|+.+++.+.+.+ ++ .+++-++.+.. ++. ..+++ . .+++++.+
T Consensus 6 ~~~rVaViG~sG~~G~~~~~~l~~~g-------~~-~V~~V~p~~~g---~~~-----~G~~v----y---~sl~el~~~ 62 (288)
T 2nu8_A 6 KNTKVICQGFTGSQGTFHSEQAIAYG-------TK-MVGGVTPGKGG---TTH-----LGLPV----F---NTVREAVAA 62 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHT-------CE-EEEEECTTCTT---CEE-----TTEEE----E---SSHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCC-------Ce-EEEEeCCCccc---cee-----CCeec----c---CCHHHHhhc
Confidence 46799999999999999999999876 56 44455554320 001 11221 1 23555555
Q ss_pred -CccEEeecCCCCCCCCHHHHHHHHHhCCcE-EEecCcHHHHHHHHHHHHHHHHhCccEEE
Q 012947 88 -QTKLLLNCVGPYRLHGDPVAAACVHSGCDY-LDISGEPEFMERMEARYHEKAVETGSLLV 146 (452)
Q Consensus 88 -~~dvVIn~aGp~~~~~~~vv~ac~~~g~~y-vDlsge~~~~~~~~~~~~~~A~~~gv~iv 146 (452)
.+|++|-++.|.. -..+++.|.+.|++. |-++..... ++ ..+..+.+++.|+.++
T Consensus 63 ~~~D~viI~tP~~~--~~~~~~ea~~~Gi~~iVi~t~G~~~-~~-~~~l~~~A~~~gv~li 119 (288)
T 2nu8_A 63 TGATASVIYVPAPF--CKDSILEAIDAGIKLIITITEGIPT-LD-MLTVKVKLDEAGVRMI 119 (288)
T ss_dssp HCCCEEEECCCGGG--HHHHHHHHHHTTCSEEEECCCCCCH-HH-HHHHHHHHHHHTCEEE
T ss_pred CCCCEEEEecCHHH--HHHHHHHHHHCCCCEEEEECCCCCH-HH-HHHHHHHHHHcCCEEE
Confidence 8999999985533 267899999999995 555542222 12 2455677888899887
|
| >3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* | Back alignment and structure |
|---|
Probab=96.68 E-value=0.011 Score=58.37 Aligned_cols=128 Identities=13% Similarity=0.040 Sum_probs=76.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCce-EEEEEecChhHHHHHHHHhCC---CCCCCccEEEEeCCCHHHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIK-SLALAGRNPTRVKQALQWASP---SHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~-~v~iagR~~~kl~~l~~~l~~---~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
.++|.|+|| |.+|..++..|+..+ + ++.+.++++++++....++.. .......+... +|. +.
T Consensus 7 ~~kI~viGa-G~vG~~~a~~l~~~~-------~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t--~d~----~a 72 (324)
T 3gvi_A 7 RNKIALIGS-GMIGGTLAHLAGLKE-------LGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGA--NDY----AA 72 (324)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTT-------CCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE--SSG----GG
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCC-------CCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEe--CCH----HH
Confidence 468999998 999999999999887 5 899999999887654444321 00112333322 232 57
Q ss_pred HcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhh
Q 012947 86 CSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSR 165 (452)
Q Consensus 86 ~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~ 165 (452)
++++|+||.++|.....|+.-.+.... ....++.+.....+.+ ..++++.. +-|.|+.++.+.+
T Consensus 73 ~~~aDiVIiaag~p~k~G~~R~dl~~~----------N~~i~~~i~~~i~~~~--p~a~iivv----tNPvd~~t~~~~k 136 (324)
T 3gvi_A 73 IEGADVVIVTAGVPRKPGMSRDDLLGI----------NLKVMEQVGAGIKKYA--PEAFVICI----TNPLDAMVWALQK 136 (324)
T ss_dssp GTTCSEEEECCSCCCC-----CHHHHH----------HHHHHHHHHHHHHHHC--TTCEEEEC----CSSHHHHHHHHHH
T ss_pred HCCCCEEEEccCcCCCCCCCHHHHHHh----------hHHHHHHHHHHHHHHC--CCeEEEec----CCCcHHHHHHHHH
Confidence 889999999999655555321111110 1233444444444433 23343322 3688999998766
Q ss_pred hc
Q 012947 166 QW 167 (452)
Q Consensus 166 ~~ 167 (452)
.-
T Consensus 137 ~s 138 (324)
T 3gvi_A 137 FS 138 (324)
T ss_dssp HH
T ss_pred hc
Confidence 53
|
| >2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=96.66 E-value=0.027 Score=54.89 Aligned_cols=125 Identities=14% Similarity=0.216 Sum_probs=71.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCce--EEEEEecChhHHHHHHHHhCCCC--CCCccEEEEeCCCHHHHHHHH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIK--SLALAGRNPTRVKQALQWASPSH--SLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~--~v~iagR~~~kl~~l~~~l~~~~--~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
++|.|+|| |.+|..++..|+..+ + +|.+.++++++++....++.... .....+. . +|. +.+
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~g-------~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~-~--~~~----~a~ 65 (304)
T 2v6b_A 1 MKVGVVGT-GFVGSTAAFALVLRG-------SCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVW-H--GGH----SEL 65 (304)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT-------CCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEE-E--ECG----GGG
T ss_pred CEEEEECC-CHHHHHHHHHHHhCC-------CCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEE-E--CCH----HHh
Confidence 47999998 999999999999887 5 89999999998877666654200 1122222 2 232 357
Q ss_pred cCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecC-cHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhh
Q 012947 87 SQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISG-EPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSR 165 (452)
Q Consensus 87 ~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsg-e~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~ 165 (452)
+++|+||.++|.....+..- .|+.. ....++.+.....+. ....+++.. +-|.++.++.+.+
T Consensus 66 ~~aDvVIi~~~~~~~~g~~r-----------~dl~~~n~~i~~~i~~~i~~~--~p~~~vi~~----tNP~~~~~~~~~~ 128 (304)
T 2v6b_A 66 ADAQVVILTAGANQKPGESR-----------LDLLEKNADIFRELVPQITRA--APDAVLLVT----SNPVDLLTDLATQ 128 (304)
T ss_dssp TTCSEEEECC-----------------------CHHHHHHHHHHHHHHHHHH--CSSSEEEEC----SSSHHHHHHHHHH
T ss_pred CCCCEEEEcCCCCCCCCCcH-----------HHHHHhHHHHHHHHHHHHHHh--CCCeEEEEe----cCchHHHHHHHHH
Confidence 89999999998654433211 11110 122333333333332 234454432 3577888887777
Q ss_pred hc
Q 012947 166 QW 167 (452)
Q Consensus 166 ~~ 167 (452)
..
T Consensus 129 ~~ 130 (304)
T 2v6b_A 129 LA 130 (304)
T ss_dssp HS
T ss_pred hC
Confidence 66
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0043 Score=61.37 Aligned_cols=74 Identities=11% Similarity=0.105 Sum_probs=53.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCC-C-HHHHHHHHc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTT-D-PPSLHRLCS 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~-d-~~sl~~~~~ 87 (452)
..+|+|+||+|.+|..+++.+...| .+|++.+|+.++++.+ ++++. ..+ .|.. + .+.+.+...
T Consensus 160 g~~VlV~Gasg~iG~~~~~~a~~~G-------a~Vi~~~~~~~~~~~~-~~~ga-----~~v--~~~~~~~~~~v~~~~~ 224 (342)
T 4eye_A 160 GETVLVLGAAGGIGTAAIQIAKGMG-------AKVIAVVNRTAATEFV-KSVGA-----DIV--LPLEEGWAKAVREATG 224 (342)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTT-------CEEEEEESSGGGHHHH-HHHTC-----SEE--EESSTTHHHHHHHHTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHH-HhcCC-----cEE--ecCchhHHHHHHHHhC
Confidence 4579999999999999999998888 7999999999998654 44541 122 2443 2 133344433
Q ss_pred --CccEEeecCCC
Q 012947 88 --QTKLLLNCVGP 98 (452)
Q Consensus 88 --~~dvVIn~aGp 98 (452)
++|+||+|+|.
T Consensus 225 ~~g~Dvvid~~g~ 237 (342)
T 4eye_A 225 GAGVDMVVDPIGG 237 (342)
T ss_dssp TSCEEEEEESCC-
T ss_pred CCCceEEEECCch
Confidence 58999999983
|
| >1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.64 E-value=0.004 Score=60.00 Aligned_cols=110 Identities=17% Similarity=0.262 Sum_probs=70.1
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
++|.|+| .|.+|+.+++.|.+.+ ++|.+.+|++++++.+.+. .+. ...+ ++++++++|
T Consensus 6 m~i~iiG-~G~~G~~~a~~l~~~g-------~~V~~~~~~~~~~~~~~~~-------g~~----~~~~---~~~~~~~~D 63 (299)
T 1vpd_A 6 MKVGFIG-LGIMGKPMSKNLLKAG-------YSLVVSDRNPEAIADVIAA-------GAE----TAST---AKAIAEQCD 63 (299)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTT-------CEEEEECSCHHHHHHHHHT-------TCE----ECSS---HHHHHHHCS
T ss_pred ceEEEEC-chHHHHHHHHHHHhCC-------CEEEEEeCCHHHHHHHHHC-------CCe----ecCC---HHHHHhCCC
Confidence 5899999 5999999999999987 7899999999998776552 111 1223 445667899
Q ss_pred EEeecCCCCCCCCHHHH------HHHHHhCCcEEEecCcHHH-HHHHHHHHHHHHHhCccEEEc
Q 012947 91 LLLNCVGPYRLHGDPVA------AACVHSGCDYLDISGEPEF-MERMEARYHEKAVETGSLLVS 147 (452)
Q Consensus 91 vVIn~aGp~~~~~~~vv------~ac~~~g~~yvDlsge~~~-~~~~~~~~~~~A~~~gv~iv~ 147 (452)
+||.|+...... ..++ ......+...||++.-.+. .+.+ .+...+.|+.++.
T Consensus 64 ~vi~~v~~~~~~-~~~~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l----~~~~~~~g~~~~~ 122 (299)
T 1vpd_A 64 VIITMLPNSPHV-KEVALGENGIIEGAKPGTVLIDMSSIAPLASREI----SDALKAKGVEMLD 122 (299)
T ss_dssp EEEECCSSHHHH-HHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHH----HHHHHTTTCEEEE
T ss_pred EEEEECCCHHHH-HHHHhCcchHhhcCCCCCEEEECCCCCHHHHHHH----HHHHHHcCCeEEE
Confidence 999998522111 2222 1223356678888655432 3333 2333344666553
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0039 Score=61.52 Aligned_cols=73 Identities=15% Similarity=0.195 Sum_probs=53.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHH---HHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPP---SLHRLC 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~---sl~~~~ 86 (452)
..+|+|+||+|.+|..+++.+...| .+|++.+|+.++++.+. +++. . ...|..+.+ .+.+..
T Consensus 145 g~~VlV~Ga~g~iG~~~~~~a~~~G-------a~Vi~~~~~~~~~~~~~-~lga------~-~~~~~~~~~~~~~~~~~~ 209 (340)
T 3gms_A 145 NDVLLVNACGSAIGHLFAQLSQILN-------FRLIAVTRNNKHTEELL-RLGA------A-YVIDTSTAPLYETVMELT 209 (340)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHHT-------CEEEEEESSSTTHHHHH-HHTC------S-EEEETTTSCHHHHHHHHT
T ss_pred CCEEEEeCCccHHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHH-hCCC------c-EEEeCCcccHHHHHHHHh
Confidence 4579999999999999999988888 79999999999986554 4542 2 234555533 333333
Q ss_pred c--CccEEeecCC
Q 012947 87 S--QTKLLLNCVG 97 (452)
Q Consensus 87 ~--~~dvVIn~aG 97 (452)
. ++|+||+|+|
T Consensus 210 ~~~g~Dvvid~~g 222 (340)
T 3gms_A 210 NGIGADAAIDSIG 222 (340)
T ss_dssp TTSCEEEEEESSC
T ss_pred CCCCCcEEEECCC
Confidence 2 6899999997
|
| >2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A | Back alignment and structure |
|---|
Probab=96.61 E-value=0.022 Score=55.69 Aligned_cols=128 Identities=13% Similarity=0.094 Sum_probs=80.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC--CCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--SHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~--~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
++|.|+|| |.+|..++-.|+..+. ..++.+.++++++++....++.. +...++.+. .+ + .+.+++
T Consensus 1 ~KI~IiGa-G~vG~~~a~~l~~~~~-----~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~-~~--~----~~a~~~ 67 (310)
T 2xxj_A 1 MKVGIVGS-GMVGSATAYALALLGV-----AREVVLVDLDRKLAQAHAEDILHATPFAHPVWVW-AG--S----YGDLEG 67 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC-----CSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEE-EC--C----GGGGTT
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-----CCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEE-EC--C----HHHhCC
Confidence 47999998 9999999999988763 14899999999999877666642 001233333 22 3 345899
Q ss_pred ccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhhc
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQW 167 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~~ 167 (452)
+|+||.++|.....|..-.+...+ ....++.+.....+.+ ..++++.. +-|-|+.++.+.+.-
T Consensus 68 aD~Vii~ag~~~~~g~~r~dl~~~----------n~~i~~~i~~~i~~~~--p~a~iiv~----tNPv~~~t~~~~k~s 130 (310)
T 2xxj_A 68 ARAVVLAAGVAQRPGETRLQLLDR----------NAQVFAQVVPRVLEAA--PEAVLLVA----TNPVDVMTQVAYALS 130 (310)
T ss_dssp EEEEEECCCCCCCTTCCHHHHHHH----------HHHHHHHHHHHHHHHC--TTCEEEEC----SSSHHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcCHHHHHHh----------hHHHHHHHHHHHHHHC--CCcEEEEe----cCchHHHHHHHHHHc
Confidence 999999999766555321111111 1223333333333332 23444432 568899998887764
|
| >7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A* | Back alignment and structure |
|---|
Probab=96.60 E-value=0.034 Score=55.85 Aligned_cols=137 Identities=11% Similarity=0.021 Sum_probs=78.5
Q ss_pred CCCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEe----cChhHHHHHHHHhCCCCCCCc-cEEEEeCCCHH
Q 012947 6 QIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAG----RNPTRVKQALQWASPSHSLSI-PILTADTTDPP 80 (452)
Q Consensus 6 ~~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iag----R~~~kl~~l~~~l~~~~~~~v-~~v~~Dl~d~~ 80 (452)
.+.++.+|.|+||+|.+|..++-.|+..+-.+ +...+.+.. ++.++++....++.. ... -.....+.+
T Consensus 28 ~~~~~~KV~ViGAaG~VG~~la~~l~~~~l~~--e~~~l~L~d~d~~~~~~~~~G~amDL~h---~~~p~~~~v~i~~-- 100 (375)
T 7mdh_A 28 SWKKLVNIAVSGAAGMISNHLLFKLASGEVFG--QDQPIALKLLGSERSFQALEGVAMELED---SLYPLLREVSIGI-- 100 (375)
T ss_dssp -CCCCEEEEEETTTSHHHHHHHHHHHHTTTTC--TTCCEEEEEECCGGGHHHHHHHHHHHHT---TTCTTEEEEEEES--
T ss_pred hCCCCCEEEEECCCChHHHHHHHHHHcCCcCC--CCceeEEEecCccchhhhhHHHHHhHHh---hhhhhcCCcEEec--
Confidence 34467899999999999999999998876311 001255533 355667776666641 111 111111111
Q ss_pred HHHHHHcCccEEeecCCCCCCCCH---HHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhh
Q 012947 81 SLHRLCSQTKLLLNCVGPYRLHGD---PVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAE 157 (452)
Q Consensus 81 sl~~~~~~~dvVIn~aGp~~~~~~---~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~d 157 (452)
...+.++++|+||-++|.....|+ .+++... ..++.+.....+.+...++.||- +-|-|
T Consensus 101 ~~y~~~~daDvVVitag~prkpG~tR~DLl~~N~-------------~I~k~i~~~i~~~a~p~~ivlVv-----sNPvD 162 (375)
T 7mdh_A 101 DPYEVFEDVDWALLIGAKPRGPGMERAALLDING-------------QIFADQGKALNAVASKNVKVLVV-----GNPCN 162 (375)
T ss_dssp CHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHH-------------HHHHHHHHHHHHHSCTTCEEEEC-----SSSHH
T ss_pred CCHHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHH-------------HHHHHHHHHHHHhcCCCeEEEEe-----cCchh
Confidence 236778999999999996554442 2333222 22333333333332233444443 35889
Q ss_pred HHHHHHhhhc
Q 012947 158 LGVMFNSRQW 167 (452)
Q Consensus 158 l~~~~~~~~~ 167 (452)
+.+|.+.+..
T Consensus 163 ~~t~ia~k~s 172 (375)
T 7mdh_A 163 TNALICLKNA 172 (375)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHHHc
Confidence 9999987654
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=96.58 E-value=0.004 Score=62.13 Aligned_cols=74 Identities=14% Similarity=0.086 Sum_probs=53.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHH---HHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPP---SLHRLC 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~---sl~~~~ 86 (452)
..+|+|+||+|.+|..+++.+...| ++|++.+|++++++.+. +++. .. ..|.++.+ .+.+..
T Consensus 164 g~~VlV~Ga~G~iG~~~~q~a~~~G-------a~Vi~~~~~~~~~~~~~-~~Ga------~~-~~~~~~~~~~~~~~~~~ 228 (362)
T 2c0c_A 164 GKKVLVTAAAGGTGQFAMQLSKKAK-------CHVIGTCSSDEKSAFLK-SLGC------DR-PINYKTEPVGTVLKQEY 228 (362)
T ss_dssp TCEEEETTTTBTTHHHHHHHHHHTT-------CEEEEEESSHHHHHHHH-HTTC------SE-EEETTTSCHHHHHHHHC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHhCC-------CEEEEEECCHHHHHHHH-HcCC------cE-EEecCChhHHHHHHHhc
Confidence 3579999999999999999998888 79999999999886654 4531 22 24554432 222222
Q ss_pred -cCccEEeecCCC
Q 012947 87 -SQTKLLLNCVGP 98 (452)
Q Consensus 87 -~~~dvVIn~aGp 98 (452)
.++|+||+|+|.
T Consensus 229 ~~g~D~vid~~g~ 241 (362)
T 2c0c_A 229 PEGVDVVYESVGG 241 (362)
T ss_dssp TTCEEEEEECSCT
T ss_pred CCCCCEEEECCCH
Confidence 258999999973
|
| >3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0046 Score=59.96 Aligned_cols=110 Identities=9% Similarity=0.002 Sum_probs=69.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
.++|.|+|. |.+|..+++.|++.| ++|.+.+|++++++++.+. .+. . . .+++++++ +
T Consensus 15 ~~~I~vIG~-G~mG~~~A~~l~~~G-------~~V~~~dr~~~~~~~~~~~-------g~~--~--~---~~~~~~~~-a 71 (296)
T 3qha_A 15 QLKLGYIGL-GNMGAPMATRMTEWP-------GGVTVYDIRIEAMTPLAEA-------GAT--L--A---DSVADVAA-A 71 (296)
T ss_dssp CCCEEEECC-STTHHHHHHHHTTST-------TCEEEECSSTTTSHHHHHT-------TCE--E--C---SSHHHHTT-S
T ss_pred CCeEEEECc-CHHHHHHHHHHHHCC-------CeEEEEeCCHHHHHHHHHC-------CCE--E--c---CCHHHHHh-C
Confidence 468999985 999999999999988 7899999999998877652 111 1 1 24566777 9
Q ss_pred cEEeecCCCCCCCCHHHHHHHH---HhCCcEEEecCcHHHH-HHHHHHHHHHHHhCccEEEc
Q 012947 90 KLLLNCVGPYRLHGDPVAAACV---HSGCDYLDISGEPEFM-ERMEARYHEKAVETGSLLVS 147 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~---~~g~~yvDlsge~~~~-~~~~~~~~~~A~~~gv~iv~ 147 (452)
|+||.|+.... .-..+++... ..+..+||.+...+-. +++ .+..++.|+.++.
T Consensus 72 Dvvi~~vp~~~-~~~~v~~~l~~~l~~g~ivv~~st~~~~~~~~~----~~~~~~~g~~~~~ 128 (296)
T 3qha_A 72 DLIHITVLDDA-QVREVVGELAGHAKPGTVIAIHSTISDTTAVEL----ARDLKARDIHIVD 128 (296)
T ss_dssp SEEEECCSSHH-HHHHHHHHHHTTCCTTCEEEECSCCCHHHHHHH----HHHHGGGTCEEEE
T ss_pred CEEEEECCChH-HHHHHHHHHHHhcCCCCEEEEeCCCCHHHHHHH----HHHHHHcCCEEEe
Confidence 99999984211 1122332222 2345677777654332 222 2333444655553
|
| >3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A | Back alignment and structure |
|---|
Probab=96.58 E-value=0.015 Score=59.52 Aligned_cols=126 Identities=13% Similarity=0.091 Sum_probs=84.1
Q ss_pred CCCeEEEEcC---CchHHHHHHHHHHHc-CCCCCCCceEE-EEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHH
Q 012947 9 ELFDVIILGA---SGFTGKYVVREALKL-FNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLH 83 (452)
Q Consensus 9 ~~~~ilV~GA---TG~iG~~va~~L~~~-g~~~~~~~~~v-~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~ 83 (452)
++++|.|+|+ +|.+|+..++.|.+. .. +++ ++++|+.++++++.++++. ..+.. .+| ++
T Consensus 19 ~~irvgiIG~g~~gG~~g~~~~~~l~~~~~~------~~lvav~d~~~~~~~~~a~~~g~---~~~~~----~~~---~~ 82 (438)
T 3btv_A 19 APIRVGFVGLNAAKGWAIKTHYPAILQLSSQ------FQITALYSPKIETSIATIQRLKL---SNATA----FPT---LE 82 (438)
T ss_dssp CCEEEEEESCCTTSSSTTTTHHHHHHHTTTT------EEEEEEECSSHHHHHHHHHHTTC---TTCEE----ESS---HH
T ss_pred CCCEEEEEcccCCCChHHHHHHHHHHhcCCC------eEEEEEEeCCHHHHHHHHHHcCC---Cccee----eCC---HH
Confidence 4589999999 599999999999886 31 665 6889999999888887641 11111 123 56
Q ss_pred HHHc--CccEEeecCCCCCCCCHHHHHHHHHhC------Cc-EEE--ecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCC
Q 012947 84 RLCS--QTKLLLNCVGPYRLHGDPVAAACVHSG------CD-YLD--ISGEPEFMERMEARYHEKAVETGSLLVSACGFD 152 (452)
Q Consensus 84 ~~~~--~~dvVIn~aGp~~~~~~~vv~ac~~~g------~~-yvD--lsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~ 152 (452)
++++ ++|+|+-|..+.. + ..++.+|+++| .| +|+ ++-...-. ..+.+.++++|+.+..+.-+-
T Consensus 83 ~ll~~~~vD~V~i~tp~~~-H-~~~~~~al~aG~~~~~~khVl~EKP~a~~~~e~----~~l~~~a~~~g~~~~v~~~~R 156 (438)
T 3btv_A 83 SFASSSTIDMIVIAIQVAS-H-YEVVMPLLEFSKNNPNLKYLFVEWALACSLDQA----ESIYKAAAERGVQTIISLQGR 156 (438)
T ss_dssp HHHHCSSCSEEEECSCHHH-H-HHHHHHHHHHGGGCTTCCEEEEESSCCSSHHHH----HHHHHHHHTTTCEEEEECGGG
T ss_pred HHhcCCCCCEEEEeCCcHH-H-HHHHHHHHHCCCCcccceeEEecCcccCCHHHH----HHHHHHHHHcCCeEEEecccc
Confidence 6665 6899999885432 2 56788899999 77 554 22222222 344567888888766444444
Q ss_pred cchh
Q 012947 153 SIPA 156 (452)
Q Consensus 153 s~P~ 156 (452)
..|.
T Consensus 157 ~~p~ 160 (438)
T 3btv_A 157 KSPY 160 (438)
T ss_dssp GCHH
T ss_pred cCHH
Confidence 4553
|
| >2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0017 Score=63.66 Aligned_cols=112 Identities=12% Similarity=0.114 Sum_probs=75.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHc-CCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 10 LFDVIILGASGFTGKYVVREALKL-FNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~-g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
..+|.|+|+ |.+|+.+++.|++. +. .+|.+.+|+.++.+++.++++ .++ .. . +++++++++
T Consensus 135 ~~~igiIG~-G~~g~~~a~~l~~~~g~------~~V~v~dr~~~~~~~l~~~~~----~~~--~~--~---~~~~e~v~~ 196 (312)
T 2i99_A 135 SEVLCILGA-GVQAYSHYEIFTEQFSF------KEVRIWNRTKENAEKFADTVQ----GEV--RV--C---SSVQEAVAG 196 (312)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHCCC------SEEEEECSSHHHHHHHHHHSS----SCC--EE--C---SSHHHHHTT
T ss_pred CcEEEEECC-cHHHHHHHHHHHHhCCC------cEEEEEcCCHHHHHHHHHHhh----CCe--EE--e---CCHHHHHhc
Confidence 468999997 89999999999886 41 389999999999999888763 112 11 1 246677889
Q ss_pred ccEEeecCCCCCCCCHHHHH-HHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEc
Q 012947 89 TKLLLNCVGPYRLHGDPVAA-ACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVS 147 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~-ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~ 147 (452)
+|+||+|.... .++++ .+++.|+|.+|++...+..+++ .+.+++.+..++-
T Consensus 197 aDiVi~atp~~----~~v~~~~~l~~g~~vi~~g~~~p~~~el----~~~~~~~g~~~vD 248 (312)
T 2i99_A 197 ADVIITVTLAT----EPILFGEWVKPGAHINAVGASRPDWREL----DDELMKEAVLYVD 248 (312)
T ss_dssp CSEEEECCCCS----SCCBCGGGSCTTCEEEECCCCSTTCCSB----CHHHHHHSEEEES
T ss_pred CCEEEEEeCCC----CcccCHHHcCCCcEEEeCCCCCCCceec----cHHHHhcCEEEEC
Confidence 99999998421 23332 4556788999985543322332 3344455666654
|
| >1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0095 Score=58.76 Aligned_cols=102 Identities=15% Similarity=0.065 Sum_probs=66.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCC-CHHHHHHHHc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTT-DPPSLHRLCS 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~-~~~~v~~v~~Dl~-d~~sl~~~~~ 87 (452)
.++|.|+|+ |.+|..++..|++.+ ++|.+.+|++++++++.+..+.. ....... ...+. ...+++++++
T Consensus 4 ~mki~iiG~-G~~G~~~a~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 74 (359)
T 1bg6_A 4 SKTYAVLGL-GNGGHAFAAYLALKG-------QSVLAWDIDAQRIKEIQDRGAIIAEGPGLAG-TAHPDLLTSDIGLAVK 74 (359)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTT-------CEEEEECSCHHHHHHHHHHTSEEEESSSCCE-EECCSEEESCHHHHHT
T ss_pred cCeEEEECC-CHHHHHHHHHHHhCC-------CEEEEEeCCHHHHHHHHhcCCeEEecccccc-ccccceecCCHHHHHh
Confidence 478999997 999999999999988 78999999999988876642100 0000000 01110 1123556678
Q ss_pred CccEEeecCCCCCCCCHHHHHHHH---HhCCcEEEecC
Q 012947 88 QTKLLLNCVGPYRLHGDPVAAACV---HSGCDYLDISG 122 (452)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~ac~---~~g~~yvDlsg 122 (452)
++|+||.|+.+... ..+++... ..++..|++.+
T Consensus 75 ~~D~vi~~v~~~~~--~~~~~~l~~~l~~~~~vv~~~~ 110 (359)
T 1bg6_A 75 DADVILIVVPAIHH--ASIAANIASYISEGQLIILNPG 110 (359)
T ss_dssp TCSEEEECSCGGGH--HHHHHHHGGGCCTTCEEEESSC
T ss_pred cCCEEEEeCCchHH--HHHHHHHHHhCCCCCEEEEcCC
Confidence 99999999965432 34444332 23566788766
|
| >3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0047 Score=59.40 Aligned_cols=66 Identities=23% Similarity=0.236 Sum_probs=52.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
++|.|+|+||.+|+.+++.|.+.+ ++|.+.+|++++++.+.+ .+ +. ..+ ..+.++++|
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g-------~~V~~~~r~~~~~~~~~~-~g------~~-----~~~---~~~~~~~aD 69 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSA-------HHLAAIEIAPEGRDRLQG-MG------IP-----LTD---GDGWIDEAD 69 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSS-------SEEEEECCSHHHHHHHHH-TT------CC-----CCC---SSGGGGTCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC-------CEEEEEECCHHHHHHHHh-cC------CC-----cCC---HHHHhcCCC
Confidence 589999999999999999999988 799999999998877654 21 11 122 234678999
Q ss_pred EEeecCCC
Q 012947 91 LLLNCVGP 98 (452)
Q Consensus 91 vVIn~aGp 98 (452)
+||.++.+
T Consensus 70 vVi~av~~ 77 (286)
T 3c24_A 70 VVVLALPD 77 (286)
T ss_dssp EEEECSCH
T ss_pred EEEEcCCc
Confidence 99999854
|
| >3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum} | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0019 Score=63.12 Aligned_cols=128 Identities=18% Similarity=0.186 Sum_probs=77.6
Q ss_pred CCCCCCCCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceE-EEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCH
Q 012947 1 MQAQSQIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKS-LALAGRNPTRVKQALQWASPSHSLSIPILTADTTDP 79 (452)
Q Consensus 1 ~~~~~~~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~-v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~ 79 (452)
|+.|.. .++++|.|+|+ |.+|+..++.|.+... .+ +.+++|+.++++++.+ .+. . .+|
T Consensus 2 m~~p~~-~~~~~igiIG~-G~~g~~~~~~l~~~~~------~~~v~v~d~~~~~~~~~~~--------~~~--~--~~~- 60 (315)
T 3c1a_A 2 MSIPAN-NSPVRLALIGA-GRWGKNYIRTIAGLPG------AALVRLASSNPDNLALVPP--------GCV--I--ESD- 60 (315)
T ss_dssp --------CCEEEEEEEC-TTTTTTHHHHHHHCTT------EEEEEEEESCHHHHTTCCT--------TCE--E--ESS-
T ss_pred CCCCCC-CCcceEEEECC-cHHHHHHHHHHHhCCC------cEEEEEEeCCHHHHHHHHh--------hCc--c--cCC-
Confidence 555543 34689999998 8999999999988641 55 5689999887643221 122 1 223
Q ss_pred HHHHHHHc--CccEEeecCCCCCCCCHHHHHHHHHhCCcE-EE--ecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcc
Q 012947 80 PSLHRLCS--QTKLLLNCVGPYRLHGDPVAAACVHSGCDY-LD--ISGEPEFMERMEARYHEKAVETGSLLVSACGFDSI 154 (452)
Q Consensus 80 ~sl~~~~~--~~dvVIn~aGp~~~~~~~vv~ac~~~g~~y-vD--lsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~ 154 (452)
++++++ ++|+|+.+..+... ..++..|+++|.|. ++ ++-...- ...+.+.++++|+.+..+.-+...
T Consensus 61 --~~~~l~~~~~D~V~i~tp~~~h--~~~~~~al~~Gk~v~~eKP~~~~~~~----~~~l~~~a~~~g~~~~~~~~~r~~ 132 (315)
T 3c1a_A 61 --WRSVVSAPEVEAVIIATPPATH--AEITLAAIASGKAVLVEKPLTLDLAE----AEAVAAAAKATGVMVWVEHTQLFN 132 (315)
T ss_dssp --THHHHTCTTCCEEEEESCGGGH--HHHHHHHHHTTCEEEEESSSCSCHHH----HHHHHHHHHHHCCCEEEECGGGGC
T ss_pred --HHHHhhCCCCCEEEEeCChHHH--HHHHHHHHHCCCcEEEcCCCcCCHHH----HHHHHHHHHHcCCEEEEeechhcC
Confidence 455664 79999999855432 57888899999984 44 1212222 234456677778776544444445
Q ss_pred hhh
Q 012947 155 PAE 157 (452)
Q Consensus 155 P~d 157 (452)
|.-
T Consensus 133 p~~ 135 (315)
T 3c1a_A 133 PAW 135 (315)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
|
| >4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ... | Back alignment and structure |
|---|
Probab=96.55 E-value=0.027 Score=55.69 Aligned_cols=129 Identities=13% Similarity=0.103 Sum_probs=79.7
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC--CCCCCccEEEEeCCCHHHHHHH
Q 012947 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--SHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 8 ~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~--~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
.+..+|.|+|| |.+|..++..|+..+.. .++.+.+++.++++....++.. .......++.. .|.+ .
T Consensus 17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~-----~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d~~----~ 84 (331)
T 4aj2_A 17 VPQNKITVVGV-GAVGMACAISILMKDLA-----DELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS--KDYS----V 84 (331)
T ss_dssp CCSSEEEEECC-SHHHHHHHHHHHHTTCC-----SEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC--SSGG----G
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCC-----ceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc--CCHH----H
Confidence 35689999998 99999999999988721 3899999999998887766631 00111122222 2432 4
Q ss_pred HcCccEEeecCCCCCCCCH---HHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHH
Q 012947 86 CSQTKLLLNCVGPYRLHGD---PVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMF 162 (452)
Q Consensus 86 ~~~~dvVIn~aGp~~~~~~---~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~ 162 (452)
++++|+||.++|.....|+ .+++.. ...++.+.....+.+ ..++++.. +-|.|+.++.
T Consensus 85 ~~~aDiVvi~aG~~~kpG~tR~dL~~~N-------------~~I~~~i~~~i~~~~--p~a~vlvv----tNPvdi~t~~ 145 (331)
T 4aj2_A 85 TANSKLVIITAGARQQEGESRLNLVQRN-------------VNIFKFIIPNVVKYS--PQCKLLIV----SNPVDILTYV 145 (331)
T ss_dssp GTTEEEEEECCSCCCCTTCCGGGGHHHH-------------HHHHHHHHHHHHHHC--TTCEEEEC----SSSHHHHHHH
T ss_pred hCCCCEEEEccCCCCCCCccHHHHHHHH-------------HHHHHHHHHHHHHHC--CCeEEEEe----cChHHHHHHH
Confidence 8899999999996554442 112111 123334333333332 23343322 3588999988
Q ss_pred Hhhhc
Q 012947 163 NSRQW 167 (452)
Q Consensus 163 ~~~~~ 167 (452)
+.+.-
T Consensus 146 ~~k~s 150 (331)
T 4aj2_A 146 AWKIS 150 (331)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 87765
|
| >3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0085 Score=58.39 Aligned_cols=112 Identities=17% Similarity=0.131 Sum_probs=74.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
..++|.|+|. |.+|..+++.|++.| ++|.+.+|++++++++.+. + +. . . .++.+++++
T Consensus 8 ~~~~IgiIG~-G~mG~~~A~~l~~~G-------~~V~~~dr~~~~~~~~~~~-g------~~--~--~---~~~~e~~~~ 65 (306)
T 3l6d_A 8 FEFDVSVIGL-GAMGTIMAQVLLKQG-------KRVAIWNRSPGKAAALVAA-G------AH--L--C---ESVKAALSA 65 (306)
T ss_dssp CSCSEEEECC-SHHHHHHHHHHHHTT-------CCEEEECSSHHHHHHHHHH-T------CE--E--C---SSHHHHHHH
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHC-C------Ce--e--c---CCHHHHHhc
Confidence 3468999985 999999999999998 7899999999999887653 1 11 1 2 245667778
Q ss_pred ccEEeecCCCCCCCCHHHHH----HHHHhCCcEEEecCcHHH-HHHHHHHHHHHHHhCccEEEc
Q 012947 89 TKLLLNCVGPYRLHGDPVAA----ACVHSGCDYLDISGEPEF-MERMEARYHEKAVETGSLLVS 147 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~----ac~~~g~~yvDlsge~~~-~~~~~~~~~~~A~~~gv~iv~ 147 (452)
+|+||.|+...... ..++. .....+..+||++...+- .+.+ .+..++.|+.++.
T Consensus 66 aDvVi~~vp~~~~~-~~v~~~~~l~~~~~g~ivid~st~~~~~~~~l----~~~~~~~g~~~vd 124 (306)
T 3l6d_A 66 SPATIFVLLDNHAT-HEVLGMPGVARALAHRTIVDYTTNAQDEGLAL----QGLVNQAGGHYVK 124 (306)
T ss_dssp SSEEEECCSSHHHH-HHHHTSTTHHHHTTTCEEEECCCCCTTHHHHH----HHHHHHTTCEEEE
T ss_pred CCEEEEEeCCHHHH-HHHhcccchhhccCCCEEEECCCCCHHHHHHH----HHHHHHcCCeEEe
Confidence 99999998532111 12221 112357779999875443 3333 3444556777664
|
| >3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0056 Score=59.78 Aligned_cols=112 Identities=17% Similarity=0.206 Sum_probs=72.5
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
+.++|.|+|+ |.+|..+++.|++.| ++|.+.+|++++++++.+ . .+. . . .++.+++++
T Consensus 20 ~m~~I~iIG~-G~mG~~~A~~l~~~G-------~~V~~~dr~~~~~~~l~~-~------g~~--~--~---~~~~~~~~~ 77 (310)
T 3doj_A 20 HMMEVGFLGL-GIMGKAMSMNLLKNG-------FKVTVWNRTLSKCDELVE-H------GAS--V--C---ESPAEVIKK 77 (310)
T ss_dssp CSCEEEEECC-SHHHHHHHHHHHHTT-------CEEEEECSSGGGGHHHHH-T------TCE--E--C---SSHHHHHHH
T ss_pred cCCEEEEECc-cHHHHHHHHHHHHCC-------CeEEEEeCCHHHHHHHHH-C------CCe--E--c---CCHHHHHHh
Confidence 4578999986 999999999999998 799999999999887764 1 111 1 1 235666778
Q ss_pred ccEEeecCCCCCCCCHHHH---H---HHHHhCCcEEEecCcHHHH-HHHHHHHHHHHHhCccEEEc
Q 012947 89 TKLLLNCVGPYRLHGDPVA---A---ACVHSGCDYLDISGEPEFM-ERMEARYHEKAVETGSLLVS 147 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv---~---ac~~~g~~yvDlsge~~~~-~~~~~~~~~~A~~~gv~iv~ 147 (452)
+|+||.|+.... .-..++ + .....+..+||++...+-. +.+ .+..++.|+.++.
T Consensus 78 aDvvi~~vp~~~-~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~----~~~~~~~g~~~v~ 138 (310)
T 3doj_A 78 CKYTIAMLSDPC-AALSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKI----NEAITGKGGRFVE 138 (310)
T ss_dssp CSEEEECCSSHH-HHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHH----HHHHHHTTCEEEE
T ss_pred CCEEEEEcCCHH-HHHHHHhCchhhhhccCCCCEEEECCCCCHHHHHHH----HHHHHHcCCEEEe
Confidence 999999883211 001122 1 1123456789988754433 333 3334456776664
|
| >4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major} | Back alignment and structure |
|---|
Probab=96.54 E-value=0.031 Score=55.59 Aligned_cols=137 Identities=13% Similarity=0.076 Sum_probs=78.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh--hHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASP-SHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~--~kl~~l~~~l~~-~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
.+.+|.|+||+|.||+.++-.|+...--+.....++.+.+.++ .+++-+..++.. .......+... +| ..+.
T Consensus 23 ~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~--~~---~~~a 97 (345)
T 4h7p_A 23 SAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVT--AD---PRVA 97 (345)
T ss_dssp CCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEE--SC---HHHH
T ss_pred CCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEc--CC---hHHH
Confidence 3579999999999999999988875311111114799999865 345554444421 01111223322 12 4567
Q ss_pred HcCccEEeecCCCCCCCCH---HHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHH
Q 012947 86 CSQTKLLLNCVGPYRLHGD---PVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMF 162 (452)
Q Consensus 86 ~~~~dvVIn~aGp~~~~~~---~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~ 162 (452)
++++|+||-++|.....|+ .+++... ..++.+.....+.+. .+++|+. -+-|-|..++.
T Consensus 98 ~~~advVvi~aG~prkpGmtR~DLl~~Na-------------~I~~~~~~~i~~~a~-~~~~vlv----vsNPvd~~~~i 159 (345)
T 4h7p_A 98 FDGVAIAIMCGAFPRKAGMERKDLLEMNA-------------RIFKEQGEAIAAVAA-SDCRVVV----VGNPANTNALI 159 (345)
T ss_dssp TTTCSEEEECCCCCCCTTCCHHHHHHHHH-------------HHHHHHHHHHHHHSC-TTCEEEE----CSSSHHHHHHH
T ss_pred hCCCCEEEECCCCCCCCCCCHHHHHHHhH-------------HHHHHHHHHHHhhcc-CceEEEE----eCCCcchHHHH
Confidence 9999999999997666552 2332222 222333332222222 3454332 13588999998
Q ss_pred HhhhcC
Q 012947 163 NSRQWI 168 (452)
Q Consensus 163 ~~~~~~ 168 (452)
+.+...
T Consensus 160 ~~~~~~ 165 (345)
T 4h7p_A 160 LLKSAQ 165 (345)
T ss_dssp HHHHTT
T ss_pred HHHHcc
Confidence 877553
|
| >3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=96.51 E-value=0.0022 Score=60.82 Aligned_cols=105 Identities=10% Similarity=0.120 Sum_probs=64.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceE-EEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKS-LALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~-v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
++|.|+|+ |.+|+.+++.+.+++ .+ +.+.+|+.++ .. .+.+ . +| +++++ ++
T Consensus 4 mkI~ViGa-GrMG~~i~~~l~~~~-------~eLva~~d~~~~~------~~------gv~v-~---~d---l~~l~-~~ 55 (243)
T 3qy9_A 4 MKILLIGY-GAMNQRVARLAEEKG-------HEIVGVIENTPKA------TT------PYQQ-Y---QH---IADVK-GA 55 (243)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT-------CEEEEEECSSCC--------C------CSCB-C---SC---TTTCT-TC
T ss_pred eEEEEECc-CHHHHHHHHHHHhCC-------CEEEEEEecCccc------cC------CCce-e---CC---HHHHh-CC
Confidence 78999999 999999999998876 23 3446776552 11 1221 1 22 23334 89
Q ss_pred cEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCC
Q 012947 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGF 151 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~ 151 (452)
|+||+++.|-.. ...++ .++|++.|-- ...|..+..+...+.+++.+ ++-+.-|
T Consensus 56 DVvIDft~p~a~--~~~~~--l~~g~~vVig--TTG~s~e~~~~l~~aa~~~~--v~~a~N~ 109 (243)
T 3qy9_A 56 DVAIDFSNPNLL--FPLLD--EDFHLPLVVA--TTGEKEKLLNKLDELSQNMP--VFFSANM 109 (243)
T ss_dssp SEEEECSCHHHH--HHHHT--SCCCCCEEEC--CCSSHHHHHHHHHHHTTTSE--EEECSSC
T ss_pred CEEEEeCChHHH--HHHHH--HhcCCceEeC--CCCCCHHHHHHHHHHHhcCC--EEEECCc
Confidence 999999876433 22333 6778887643 33455554566677666543 4444444
|
| >1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A* | Back alignment and structure |
|---|
Probab=96.49 E-value=0.0054 Score=60.32 Aligned_cols=119 Identities=19% Similarity=0.261 Sum_probs=76.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceE-EEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKS-LALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~-v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
+++|.|+|+ |.+|+.+++.|.+... .+ +.+++|+.++ + + . ..+.. .+| +++++.+
T Consensus 3 ~irV~IiG~-G~mG~~~~~~l~~~~~------~elvav~d~~~~~--~----~----~--~gv~~--~~d---~~~ll~~ 58 (320)
T 1f06_A 3 NIRVAIVGY-GNLGRSVEKLIAKQPD------MDLVGIFSRRATL--D----T----K--TPVFD--VAD---VDKHADD 58 (320)
T ss_dssp CEEEEEECC-SHHHHHHHHHHTTCSS------EEEEEEEESSSCC--S----S----S--SCEEE--GGG---GGGTTTT
T ss_pred CCEEEEEee-cHHHHHHHHHHhcCCC------CEEEEEEcCCHHH--h----h----c--CCCce--eCC---HHHHhcC
Confidence 578999996 9999999999987642 55 4678887654 1 1 0 11111 223 3344478
Q ss_pred ccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcc
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSI 154 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~ 154 (452)
+|+||.|..+... ...+..|+++|.|.|+.+....-..+....+.+.+++++...+..++|++.
T Consensus 59 ~DvViiatp~~~h--~~~~~~al~aG~~Vv~ekp~~~~~~~~~~~l~~~a~~~~~v~v~~~~~~p~ 122 (320)
T 1f06_A 59 VDVLFLCMGSATD--IPEQAPKFAQFACTVDTYDNHRDIPRHRQVMNEAATAAGNVALVSTGWDPG 122 (320)
T ss_dssp CSEEEECSCTTTH--HHHHHHHHTTTSEEECCCCCGGGHHHHHHHHHHHHHHHTCEEECSCSBTTB
T ss_pred CCEEEEcCCcHHH--HHHHHHHHHCCCEEEECCCCcCCHHHHHHHHHHHHHhCCCEEEEecCChHH
Confidence 9999999977543 567888999999988766432223333245566666666454444477543
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=96.49 E-value=0.0056 Score=59.24 Aligned_cols=73 Identities=18% Similarity=0.140 Sum_probs=54.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+|+|+||+|.+|..+++.+...| .+|++.+|++++++.+ ++++ .. ...|..+.+++.+.+.++
T Consensus 126 g~~vlV~Ga~G~vG~~~~~~a~~~G-------a~Vi~~~~~~~~~~~~-~~~g------a~-~~~~~~~~~~~~~~~~~~ 190 (302)
T 1iz0_A 126 GEKVLVQAAAGALGTAAVQVARAMG-------LRVLAAASRPEKLALP-LALG------AE-EAATYAEVPERAKAWGGL 190 (302)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHTT-------CEEEEEESSGGGSHHH-HHTT------CS-EEEEGGGHHHHHHHTTSE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHH-HhcC------CC-EEEECCcchhHHHHhcCc
Confidence 3579999999999999999988887 7999999999988655 4453 12 234665513344444789
Q ss_pred cEEeecCCC
Q 012947 90 KLLLNCVGP 98 (452)
Q Consensus 90 dvVIn~aGp 98 (452)
|+||+ +|.
T Consensus 191 d~vid-~g~ 198 (302)
T 1iz0_A 191 DLVLE-VRG 198 (302)
T ss_dssp EEEEE-CSC
T ss_pred eEEEE-CCH
Confidence 99999 874
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=96.49 E-value=0.0069 Score=59.93 Aligned_cols=72 Identities=11% Similarity=0.095 Sum_probs=53.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHH---HHHHHH-
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPP---SLHRLC- 86 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~---sl~~~~- 86 (452)
..++|+||+|.+|..+++.+...| .+|++.+|++++++.+. +++. . ...|.++.+ .+.+..
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~G-------a~Vi~~~~~~~~~~~~~-~~Ga------~-~~~~~~~~~~~~~v~~~~~ 230 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEG-------FRPIVTVRRDEQIALLK-DIGA------A-HVLNEKAPDFEATLREVMK 230 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHT-------CEEEEEESCGGGHHHHH-HHTC------S-EEEETTSTTHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHH-HcCC------C-EEEECCcHHHHHHHHHHhc
Confidence 468999999999999999998888 79999999999986554 5542 2 234555432 333333
Q ss_pred -cCccEEeecCC
Q 012947 87 -SQTKLLLNCVG 97 (452)
Q Consensus 87 -~~~dvVIn~aG 97 (452)
.++|+||+|+|
T Consensus 231 ~~g~D~vid~~g 242 (349)
T 3pi7_A 231 AEQPRIFLDAVT 242 (349)
T ss_dssp HHCCCEEEESSC
T ss_pred CCCCcEEEECCC
Confidence 27999999987
|
| >1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* | Back alignment and structure |
|---|
Probab=96.47 E-value=0.0089 Score=58.49 Aligned_cols=80 Identities=13% Similarity=0.106 Sum_probs=53.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCC---CCCCccEEEEeCCCHHHHHHHHc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS---HSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~---~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
++|.|+|| |++|..++..|+..+. +++.+.++++++++....++... ......+... +| . +.++
T Consensus 3 ~kI~VIGa-G~vG~~~a~~la~~g~------~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d---~-~a~~ 69 (309)
T 1ur5_A 3 KKISIIGA-GFVGSTTAHWLAAKEL------GDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NN---Y-ADTA 69 (309)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC------SEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SC---G-GGGT
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCC------CeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC--CC---H-HHHC
Confidence 58999999 9999999999998872 37999999998887665555310 0112233321 23 2 4588
Q ss_pred CccEEeecCCCCCCCC
Q 012947 88 QTKLLLNCVGPYRLHG 103 (452)
Q Consensus 88 ~~dvVIn~aGp~~~~~ 103 (452)
++|+||.++|.....+
T Consensus 70 ~aD~Vi~a~g~p~~~g 85 (309)
T 1ur5_A 70 NSDVIVVTSGAPRKPG 85 (309)
T ss_dssp TCSEEEECCCC-----
T ss_pred CCCEEEEcCCCCCCCC
Confidence 9999999998654433
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=96.45 E-value=0.0053 Score=61.03 Aligned_cols=73 Identities=18% Similarity=0.153 Sum_probs=57.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
-+|+|+|+ |.+|..+++.+...| .+|++.++++++++.+.++++. . ...|..+.+.+.++..++|
T Consensus 182 ~~VlV~Ga-G~vG~~a~qlak~~G-------a~Vi~~~~~~~~~~~~~~~lGa------~-~vi~~~~~~~~~~~~~g~D 246 (357)
T 2cf5_A 182 LRGGILGL-GGVGHMGVKIAKAMG-------HHVTVISSSNKKREEALQDLGA------D-DYVIGSDQAKMSELADSLD 246 (357)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHT-------CEEEEEESSTTHHHHHHTTSCC------S-CEEETTCHHHHHHSTTTEE
T ss_pred CEEEEECC-CHHHHHHHHHHHHCC-------CeEEEEeCChHHHHHHHHHcCC------c-eeeccccHHHHHHhcCCCC
Confidence 57999996 899999999888888 7899999999998776656642 1 1346667777777667899
Q ss_pred EEeecCCC
Q 012947 91 LLLNCVGP 98 (452)
Q Consensus 91 vVIn~aGp 98 (452)
+||+++|.
T Consensus 247 ~vid~~g~ 254 (357)
T 2cf5_A 247 YVIDTVPV 254 (357)
T ss_dssp EEEECCCS
T ss_pred EEEECCCC
Confidence 99999984
|
| >2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C* | Back alignment and structure |
|---|
Probab=96.44 E-value=0.0022 Score=63.64 Aligned_cols=95 Identities=18% Similarity=0.172 Sum_probs=62.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEe-c-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAG-R-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iag-R-~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
.++|.|.||||++|+.+++.|.++.. +..++..+. | +..+. + .+. ...+...|.+ ++ .++
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~----p~~elv~i~s~~~~G~~--~--~~~-----~~~i~~~~~~-~~----~~~ 64 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREF----PVDELFLLASERSEGKT--Y--RFN-----GKTVRVQNVE-EF----DWS 64 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTC----CEEEEEEEECTTTTTCE--E--EET-----TEEEEEEEGG-GC----CGG
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCC----CCEEEEEEECCCCCCCc--e--eec-----CceeEEecCC-hH----Hhc
Confidence 47899999999999999999998731 125666555 2 22110 0 011 1122223332 22 236
Q ss_pred CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcH
Q 012947 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEP 124 (452)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~ 124 (452)
++|+||.|.|.+. ....++.+.+.|+..||+++..
T Consensus 65 ~vDvVf~a~g~~~--s~~~a~~~~~~G~~vId~s~~~ 99 (336)
T 2r00_A 65 QVHIALFSAGGEL--SAKWAPIAAEAGVVVIDNTSHF 99 (336)
T ss_dssp GCSEEEECSCHHH--HHHHHHHHHHTTCEEEECSSTT
T ss_pred CCCEEEECCCchH--HHHHHHHHHHcCCEEEEcCCcc
Confidence 8999999997543 3678888999999999999874
|
| >3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.44 E-value=0.022 Score=56.22 Aligned_cols=121 Identities=14% Similarity=0.177 Sum_probs=80.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEE-EEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v-~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
++|.|+|+ |.+|+..++.|.+... .++ ++++|++++++++.+.++ +... .+ +++++++
T Consensus 3 ~rvgiIG~-G~~g~~~~~~l~~~~~------~~l~av~d~~~~~~~~~~~~~~------~~~~---~~---~~~~ll~~~ 63 (344)
T 3ezy_A 3 LRIGVIGL-GRIGTIHAENLKMIDD------AILYAISDVREDRLREMKEKLG------VEKA---YK---DPHELIEDP 63 (344)
T ss_dssp EEEEEECC-SHHHHHHHHHGGGSTT------EEEEEEECSCHHHHHHHHHHHT------CSEE---ES---SHHHHHHCT
T ss_pred eEEEEEcC-CHHHHHHHHHHHhCCC------cEEEEEECCCHHHHHHHHHHhC------CCce---eC---CHHHHhcCC
Confidence 68999997 8999999999887531 665 478999999988888763 1211 12 3556666
Q ss_pred CccEEeecCCCCCCCCHHHHHHHHHhCCcEE-Ee--cCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchh
Q 012947 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCDYL-DI--SGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPA 156 (452)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yv-Dl--sge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~ 156 (452)
++|+|+-|..+.. + ..++..|+++|.|.+ += +-...-. ..+.+.++++|+.+..+.-+-..|.
T Consensus 64 ~~D~V~i~tp~~~-h-~~~~~~al~~gk~v~~EKP~~~~~~e~----~~l~~~a~~~g~~~~v~~~~R~~p~ 129 (344)
T 3ezy_A 64 NVDAVLVCSSTNT-H-SELVIACAKAKKHVFCEKPLSLNLADV----DRMIEETKKADVILFTGFNRRFDRN 129 (344)
T ss_dssp TCCEEEECSCGGG-H-HHHHHHHHHTTCEEEEESCSCSCHHHH----HHHHHHHHHHTCCEEEECGGGGCHH
T ss_pred CCCEEEEcCCCcc-h-HHHHHHHHhcCCeEEEECCCCCCHHHH----HHHHHHHHHhCCcEEEeecccCCHH
Confidence 7899998885432 2 578889999999844 31 2222222 3445667777876554444444553
|
| >3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber} | Back alignment and structure |
|---|
Probab=96.42 E-value=0.0082 Score=58.99 Aligned_cols=128 Identities=13% Similarity=0.126 Sum_probs=72.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC---CCCCCccEEEEeCCCHHHHHHHHc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP---SHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~---~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
|+|.|+|| |.+|..++..|+..+.. -++.+.++++++++....++.. ....++.+... ++ .+.++
T Consensus 1 Mkv~ViGa-G~vG~~~a~~l~~~~~~-----~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~--~~----~~a~~ 68 (314)
T 3nep_X 1 MKVTVIGA-GNVGATVAECVARQDVA-----KEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGT--ND----YGPTE 68 (314)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCS-----SEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEE--SS----SGGGT
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCC-----CEEEEEeCchHHHHHHHHHHhccccccCCCcEEEEC--CC----HHHhC
Confidence 57999997 99999999999988720 2899999999887765544421 00112333322 22 34688
Q ss_pred CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhh
Q 012947 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQ 166 (452)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~ 166 (452)
++|+||.++|.....|+.=.+.... ....++.+.....+.+ ..++++.. +-|.|+.++.+.+.
T Consensus 69 ~aDvVii~ag~~~kpG~~R~dl~~~----------N~~i~~~i~~~i~~~~--p~a~vivv----tNPvd~~t~~~~k~ 131 (314)
T 3nep_X 69 DSDVCIITAGLPRSPGMSRDDLLAK----------NTEIVGGVTEQFVEGS--PDSTIIVV----ANPLDVMTYVAYEA 131 (314)
T ss_dssp TCSEEEECCCC-------CHHHHHH----------HHHHHHHHHHHHHTTC--TTCEEEEC----CSSHHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCCCHHHHHHh----------hHHHHHHHHHHHHHhC--CCcEEEec----CCchhHHHHHHHHh
Confidence 9999999999654443211111000 1122333333332222 23344322 36889999988774
|
| >3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A | Back alignment and structure |
|---|
Probab=96.42 E-value=0.0024 Score=64.11 Aligned_cols=96 Identities=18% Similarity=0.220 Sum_probs=61.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
++|.|.||||++|+.+++.|.+++. +..++..+.-....-+.+ . +. ......-+++. +. ++++|
T Consensus 3 ~kVaIvGATG~vG~eLlrlL~~~~~----p~~el~~~as~~saG~~~-~-~~-----~~~~~~~~~~~-~~----~~~~D 66 (366)
T 3pwk_A 3 YTVAVVGATGAVGAQMIKMLEESTL----PIDKIRYLASARSAGKSL-K-FK-----DQDITIEETTE-TA----FEGVD 66 (366)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCCC----CEEEEEEEECTTTTTCEE-E-ET-----TEEEEEEECCT-TT----TTTCS
T ss_pred cEEEEECCCChHHHHHHHHHhcCCC----CcEEEEEEEccccCCCcc-e-ec-----CCCceEeeCCH-HH----hcCCC
Confidence 7899999999999999999888741 124555443221110000 0 11 11233333332 22 47899
Q ss_pred EEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcH
Q 012947 91 LLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEP 124 (452)
Q Consensus 91 vVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~ 124 (452)
+||.|+|.+. ....+....+.|+..||+++..
T Consensus 67 vvf~a~~~~~--s~~~a~~~~~~G~~vIDlSa~~ 98 (366)
T 3pwk_A 67 IALFSAGSST--SAKYAPYAVKAGVVVVDNTSYF 98 (366)
T ss_dssp EEEECSCHHH--HHHHHHHHHHTTCEEEECSSTT
T ss_pred EEEECCChHh--HHHHHHHHHHCCCEEEEcCCcc
Confidence 9999997432 3567788889999999999853
|
| >3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A* | Back alignment and structure |
|---|
Probab=96.42 E-value=0.0016 Score=57.26 Aligned_cols=70 Identities=11% Similarity=0.199 Sum_probs=51.1
Q ss_pred CchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHH------HHHHHHhCCCCCCCccEEEEeCCCH--HHHHHHHc---
Q 012947 19 SGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRV------KQALQWASPSHSLSIPILTADTTDP--PSLHRLCS--- 87 (452)
Q Consensus 19 TG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl------~~l~~~l~~~~~~~v~~v~~Dl~d~--~sl~~~~~--- 87 (452)
+|.++..+++.|++.| +++++..|+.+.. .+..++. +.+...+.+|++++ ++++++++
T Consensus 25 s~~p~~a~a~~La~~G-------a~vvi~~r~~~e~~~~~~~~~~~~~~----G~~~~~i~~Dv~~~~~~~v~~~~~~i~ 93 (157)
T 3gxh_A 25 SGLPNEQQFSLLKQAG-------VDVVINLMPDSSKDAHPDEGKLVTQA----GMDYVYIPVDWQNPKVEDVEAFFAAMD 93 (157)
T ss_dssp EBCCCHHHHHHHHHTT-------CCEEEECSCTTSTTSCTTHHHHHHHT----TCEEEECCCCTTSCCHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHcC-------CCEEEECCCcccccccccHHHHHHHc----CCeEEEecCCCCCCCHHHHHHHHHHHH
Confidence 3568899999999998 8999998865432 3333433 23456677899998 88887765
Q ss_pred ---CccEEeecCCCC
Q 012947 88 ---QTKLLLNCVGPY 99 (452)
Q Consensus 88 ---~~dvVIn~aGp~ 99 (452)
+-|++|||+|..
T Consensus 94 ~~~G~dVLVnnAgg~ 108 (157)
T 3gxh_A 94 QHKGKDVLVHCLANY 108 (157)
T ss_dssp HTTTSCEEEECSBSH
T ss_pred hcCCCCEEEECCCCC
Confidence 239999999853
|
| >3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=96.41 E-value=0.0085 Score=56.38 Aligned_cols=69 Identities=16% Similarity=0.290 Sum_probs=50.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhH--------------HHHHHHHhCCCCCCCccEEEE
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR--------------VKQALQWASPSHSLSIPILTA 74 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~k--------------l~~l~~~l~~~~~~~v~~v~~ 74 (452)
..++|.|+| +|.+|..+++.|++.| ++|.+.+|++++ ++++.++++ .. ..
T Consensus 18 ~~~kIgiIG-~G~mG~alA~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~--~~- 81 (245)
T 3dtt_A 18 QGMKIAVLG-TGTVGRTMAGALADLG-------HEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHP-----HV--HL- 81 (245)
T ss_dssp -CCEEEEEC-CSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHTCC-------CCHHHHGGGST-----TC--EE-
T ss_pred CCCeEEEEC-CCHHHHHHHHHHHHCC-------CEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcC-----ce--ec-
Confidence 357899998 5999999999999998 799999999987 444433321 11 11
Q ss_pred eCCCHHHHHHHHcCccEEeecCCC
Q 012947 75 DTTDPPSLHRLCSQTKLLLNCVGP 98 (452)
Q Consensus 75 Dl~d~~sl~~~~~~~dvVIn~aGp 98 (452)
.+..++++++|+||.++.+
T Consensus 82 -----~~~~e~~~~aDvVilavp~ 100 (245)
T 3dtt_A 82 -----AAFADVAAGAELVVNATEG 100 (245)
T ss_dssp -----EEHHHHHHHCSEEEECSCG
T ss_pred -----cCHHHHHhcCCEEEEccCc
Confidence 2345677889999999854
|
| >3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1 | Back alignment and structure |
|---|
Probab=96.41 E-value=0.056 Score=53.36 Aligned_cols=130 Identities=11% Similarity=0.041 Sum_probs=77.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC--CCCCCccEEEEeCCCHHHHHHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--SHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~--~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
+..+|.|+|| |.+|..++..|+..+-. .++.+.++++++++....++.. .......+... +|. +. +
T Consensus 20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~-----~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t--~d~---~~-~ 87 (330)
T 3ldh_A 20 SYNKITVVGC-DAVGMADAISVLMKDLA-----DEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSG--KDY---SV-S 87 (330)
T ss_dssp CCCEEEEEST-THHHHHHHHHHHHHCCC-----SEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEE--SSS---CS-C
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCC-----CeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEc--CCH---HH-h
Confidence 3478999999 99999999999998720 2899999999988776555421 00112223322 222 22 7
Q ss_pred cCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecC-cHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhh
Q 012947 87 SQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISG-EPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSR 165 (452)
Q Consensus 87 ~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsg-e~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~ 165 (452)
+++|+||-++|.....|+. ..|+-. ....++.+.....+.+ ..++++.. +-|.|+.++.+.+
T Consensus 88 ~daDiVIitaG~p~kpG~t-----------R~dll~~N~~I~k~i~~~I~k~~--P~a~ilvv----tNPvdi~t~~~~k 150 (330)
T 3ldh_A 88 AGSKLVVITAGARQQEGES-----------RLNLVQRNVNIFKFIIPNIVKHS--PDCLKELH----PELGTDKNKQDWK 150 (330)
T ss_dssp SSCSEEEECCSCCCCSSCC-----------TTGGGHHHHHHHHHHHHHHHHHC--TTCEEEEC----SSSHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCCCCCCC-----------HHHHHHhhHHHHHHHHHHHHhhC--CCceEEeC----CCccHHHHHHHHH
Confidence 8999999999965544421 011110 1122333333333332 23343322 3588999998877
Q ss_pred hc
Q 012947 166 QW 167 (452)
Q Consensus 166 ~~ 167 (452)
.-
T Consensus 151 ~s 152 (330)
T 3ldh_A 151 LS 152 (330)
T ss_dssp HH
T ss_pred Hh
Confidence 65
|
| >1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A* | Back alignment and structure |
|---|
Probab=96.39 E-value=0.016 Score=59.31 Aligned_cols=128 Identities=13% Similarity=0.081 Sum_probs=81.5
Q ss_pred CCCCeEEEEcCCchHHH-HHHHHHHHcCCCCCCCceEE-EEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 012947 8 PELFDVIILGASGFTGK-YVVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 8 ~~~~~ilV~GATG~iG~-~va~~L~~~g~~~~~~~~~v-~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
.++++|.|+|+ |.+|+ ..++.|.+... .++ ++++|+.++++++.++++. ....+.. .+| ++++
T Consensus 81 ~~~irigiIG~-G~~g~~~~~~~l~~~~~------~~lvav~d~~~~~~~~~a~~~g~---~~~~~~~--~~~---~~~l 145 (433)
T 1h6d_A 81 DRRFGYAIVGL-GKYALNQILPGFAGCQH------SRIEALVSGNAEKAKIVAAEYGV---DPRKIYD--YSN---FDKI 145 (433)
T ss_dssp CCCEEEEEECC-SHHHHHTHHHHTTTCSS------EEEEEEECSCHHHHHHHHHHTTC---CGGGEEC--SSS---GGGG
T ss_pred CCceEEEEECC-cHHHHHHHHHHHhhCCC------cEEEEEEcCCHHHHHHHHHHhCC---Ccccccc--cCC---HHHH
Confidence 45689999998 89997 78888876531 564 6889999999888877641 1101111 223 4556
Q ss_pred Hc--CccEEeecCCCCCCCCHHHHHHHHHhCCcE-EE--ecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchh
Q 012947 86 CS--QTKLLLNCVGPYRLHGDPVAAACVHSGCDY-LD--ISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPA 156 (452)
Q Consensus 86 ~~--~~dvVIn~aGp~~~~~~~vv~ac~~~g~~y-vD--lsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~ 156 (452)
++ ++|+|+-|..+.. + ..++..|+++|.|. ++ ++-...- ...+.+.++++|+.+..+.-+-..|.
T Consensus 146 l~~~~vD~V~iatp~~~-h-~~~~~~al~aGk~Vl~EKPla~~~~e----~~~l~~~a~~~g~~~~v~~~~R~~p~ 215 (433)
T 1h6d_A 146 AKDPKIDAVYIILPNSL-H-AEFAIRAFKAGKHVMCEKPMATSVAD----CQRMIDAAKAANKKLMIGYRCHYDPM 215 (433)
T ss_dssp GGCTTCCEEEECSCGGG-H-HHHHHHHHHTTCEEEECSSCCSSHHH----HHHHHHHHHHHTCCEEECCGGGGCHH
T ss_pred hcCCCCCEEEEcCCchh-H-HHHHHHHHHCCCcEEEcCCCCCCHHH----HHHHHHHHHHhCCeEEEEechhcCHH
Confidence 65 6899999885433 2 57888899999984 43 2222222 24445667777877654443444553
|
| >2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A | Back alignment and structure |
|---|
Probab=96.37 E-value=0.0018 Score=63.63 Aligned_cols=128 Identities=9% Similarity=0.038 Sum_probs=75.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCce-EEEEEecChhHHHHHHHHhCC---CCCCCccEEEEeCCCHHHHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIK-SLALAGRNPTRVKQALQWASP---SHSLSIPILTADTTDPPSLHR 84 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~-~v~iagR~~~kl~~l~~~l~~---~~~~~v~~v~~Dl~d~~sl~~ 84 (452)
..++|.|+|| |.+|..++..|++.+ + +|.+.+|++++++....++.. .......+... +| + +
T Consensus 3 ~~~kI~VIGa-G~~G~~ia~~la~~g-------~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t--~d---~-~ 68 (317)
T 2ewd_A 3 ERRKIAVIGS-GQIGGNIAYIVGKDN-------LADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGT--DD---Y-A 68 (317)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHT-------CCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE--SC---G-G
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCC-------CceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEEC--CC---H-H
Confidence 3578999998 999999999999988 5 899999999887764322210 00011122221 23 2 4
Q ss_pred HHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecC-cHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHH
Q 012947 85 LCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISG-EPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFN 163 (452)
Q Consensus 85 ~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsg-e~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~ 163 (452)
.++++|+||.++|.....+..-. |+.- .....+.+.....+.+ .+.++++. +-|.++.++.+
T Consensus 69 a~~~aDiVi~avg~p~~~g~~r~-----------d~~~~~~~i~~~i~~~i~~~~--~~~iii~~----sNp~~~~~~~~ 131 (317)
T 2ewd_A 69 DISGSDVVIITASIPGRPKDDRS-----------ELLFGNARILDSVAEGVKKYC--PNAFVICI----TNPLDVMVSHF 131 (317)
T ss_dssp GGTTCSEEEECCCCSSCCSSCGG-----------GGHHHHHHHHHHHHHHHHHHC--TTSEEEEC----CSSHHHHHHHH
T ss_pred HhCCCCEEEEeCCCCCCCCCcHH-----------HHHHhhHHHHHHHHHHHHHHC--CCcEEEEe----CChHHHHHHHH
Confidence 57899999999986555442111 1110 1122334434444333 24454433 23778888777
Q ss_pred hhhc
Q 012947 164 SRQW 167 (452)
Q Consensus 164 ~~~~ 167 (452)
.+..
T Consensus 132 ~~~~ 135 (317)
T 2ewd_A 132 QKVS 135 (317)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 7765
|
| >3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=96.35 E-value=0.016 Score=56.92 Aligned_cols=128 Identities=13% Similarity=0.131 Sum_probs=76.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCce-EEEEEecC--hhHHHHHHHHhCC--C-CCCCccEEEEeCCCHHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIK-SLALAGRN--PTRVKQALQWASP--S-HSLSIPILTADTTDPPSL 82 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~-~v~iagR~--~~kl~~l~~~l~~--~-~~~~v~~v~~Dl~d~~sl 82 (452)
+..+|.|+|+ |.+|..++..|+..+ + ++.+.+++ +++++....++.. + ......+... +|
T Consensus 7 ~~~kv~ViGa-G~vG~~ia~~l~~~g-------~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t--~d---- 72 (315)
T 3tl2_A 7 KRKKVSVIGA-GFTGATTAFLLAQKE-------LADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGT--SD---- 72 (315)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTT-------CCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEE--SC----
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCC-------CCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEc--CC----
Confidence 3468999997 999999999999987 6 89999999 6666655444321 0 0012233322 12
Q ss_pred HHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHH
Q 012947 83 HRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMF 162 (452)
Q Consensus 83 ~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~ 162 (452)
.+.++++|+||.++|.....|+.=.+.... ....++.+.....+.+ ..++++.. +-|.|+.++.
T Consensus 73 ~~a~~~aDvVIiaag~p~kpg~~R~dl~~~----------N~~i~~~i~~~i~~~~--p~a~vlvv----sNPvd~~t~~ 136 (315)
T 3tl2_A 73 YADTADSDVVVITAGIARKPGMSRDDLVAT----------NSKIMKSITRDIAKHS--PNAIIVVL----TNPVDAMTYS 136 (315)
T ss_dssp GGGGTTCSEEEECCSCCCCTTCCHHHHHHH----------HHHHHHHHHHHHHHHC--TTCEEEEC----CSSHHHHHHH
T ss_pred HHHhCCCCEEEEeCCCCCCCCCCHHHHHHH----------HHHHHHHHHHHHHHhC--CCeEEEEC----CChHHHHHHH
Confidence 246889999999999655544211111111 1123344433333333 23343322 3688999998
Q ss_pred Hhhh
Q 012947 163 NSRQ 166 (452)
Q Consensus 163 ~~~~ 166 (452)
+.+.
T Consensus 137 ~~k~ 140 (315)
T 3tl2_A 137 VFKE 140 (315)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8764
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=96.32 E-value=0.01 Score=61.15 Aligned_cols=73 Identities=21% Similarity=0.241 Sum_probs=53.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCC-----------
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTD----------- 78 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d----------- 78 (452)
.-+|+|+||+|.+|..+++.+...| .+++++++++++++.+ ++++. .. ..|..+
T Consensus 229 g~~VlV~GasG~vG~~avqlak~~G-------a~vi~~~~~~~~~~~~-~~lGa------~~-vi~~~~~d~~~~~~~~~ 293 (456)
T 3krt_A 229 GDNVLIWGASGGLGSYATQFALAGG-------ANPICVVSSPQKAEIC-RAMGA------EA-IIDRNAEGYRFWKDENT 293 (456)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTT-------CEEEEEESSHHHHHHH-HHHTC------CE-EEETTTTTCCSEEETTE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcC-------CeEEEEECCHHHHHHH-HhhCC------cE-EEecCcCcccccccccc
Confidence 4579999999999999999988887 7888889999998655 55642 11 223322
Q ss_pred --H-------HHHHHHHc--CccEEeecCC
Q 012947 79 --P-------PSLHRLCS--QTKLLLNCVG 97 (452)
Q Consensus 79 --~-------~sl~~~~~--~~dvVIn~aG 97 (452)
. +.+.++.. ++|+||+|+|
T Consensus 294 ~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G 323 (456)
T 3krt_A 294 QDPKEWKRFGKRIRELTGGEDIDIVFEHPG 323 (456)
T ss_dssp ECHHHHHHHHHHHHHHHTSCCEEEEEECSC
T ss_pred cchHHHHHHHHHHHHHhCCCCCcEEEEcCC
Confidence 1 34444443 6899999987
|
| >3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=96.31 E-value=0.0095 Score=57.24 Aligned_cols=110 Identities=14% Similarity=0.213 Sum_probs=69.1
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
++|.|+| .|.+|..+++.|++.| ++|.+.+|++++.+++.+. + +. . . .+++++++++|
T Consensus 2 ~~I~iiG-~G~mG~~~a~~l~~~G-------~~V~~~dr~~~~~~~~~~~-g------~~--~--~---~~~~~~~~~ad 59 (287)
T 3pdu_A 2 TTYGFLG-LGIMGGPMAANLVRAG-------FDVTVWNRNPAKCAPLVAL-G------AR--Q--A---SSPAEVCAACD 59 (287)
T ss_dssp CCEEEEC-CSTTHHHHHHHHHHHT-------CCEEEECSSGGGGHHHHHH-T------CE--E--C---SCHHHHHHHCS
T ss_pred CeEEEEc-cCHHHHHHHHHHHHCC-------CeEEEEcCCHHHHHHHHHC-C------Ce--e--c---CCHHHHHHcCC
Confidence 3689998 5999999999999998 7899999999998877653 1 11 1 1 23556677899
Q ss_pred EEeecCCCCCCCCHHHH---H---HHHHhCCcEEEecCcHHHH-HHHHHHHHHHHHhCccEEEc
Q 012947 91 LLLNCVGPYRLHGDPVA---A---ACVHSGCDYLDISGEPEFM-ERMEARYHEKAVETGSLLVS 147 (452)
Q Consensus 91 vVIn~aGp~~~~~~~vv---~---ac~~~g~~yvDlsge~~~~-~~~~~~~~~~A~~~gv~iv~ 147 (452)
+||.|+...... ..++ + .....+..+||.+...+-. +.+ .+..++.|+.++.
T Consensus 60 vvi~~v~~~~~~-~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~----~~~~~~~g~~~~~ 118 (287)
T 3pdu_A 60 ITIAMLADPAAA-REVCFGANGVLEGIGGGRGYIDMSTVDDETSTAI----GAAVTARGGRFLE 118 (287)
T ss_dssp EEEECCSSHHHH-HHHHHSTTCGGGTCCTTCEEEECSCCCHHHHHHH----HHHHHHTTCEEEE
T ss_pred EEEEEcCCHHHH-HHHHcCchhhhhcccCCCEEEECCCCCHHHHHHH----HHHHHHcCCEEEE
Confidence 999988432110 1122 1 1112455678887654332 233 2333445666554
|
| >1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5 | Back alignment and structure |
|---|
Probab=96.30 E-value=0.016 Score=56.72 Aligned_cols=122 Identities=16% Similarity=0.109 Sum_probs=79.4
Q ss_pred CeEEEEcCCchHHH-HHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 11 FDVIILGASGFTGK-YVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~-~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
++|.|+|+ |.+|+ ..++.|.+... .++++++|+.++++++.++++. .....| +.+.+ ..++
T Consensus 3 ~~igiIG~-G~ig~~~~~~~l~~~~~------~~l~v~d~~~~~~~~~a~~~g~------~~~~~~--~~~~l---~~~~ 64 (323)
T 1xea_A 3 LKIAMIGL-GDIAQKAYLPVLAQWPD------IELVLCTRNPKVLGTLATRYRV------SATCTD--YRDVL---QYGV 64 (323)
T ss_dssp EEEEEECC-CHHHHHTHHHHHTTSTT------EEEEEECSCHHHHHHHHHHTTC------CCCCSS--TTGGG---GGCC
T ss_pred cEEEEECC-CHHHHHHHHHHHHhCCC------ceEEEEeCCHHHHHHHHHHcCC------CccccC--HHHHh---hcCC
Confidence 68999997 89998 58888876531 6777999999999888887641 110112 22222 3689
Q ss_pred cEEeecCCCCCCCCHHHHHHHHHhCCcE-EE--ecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchh
Q 012947 90 KLLLNCVGPYRLHGDPVAAACVHSGCDY-LD--ISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPA 156 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~~~g~~y-vD--lsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~ 156 (452)
|+|+.+..+... ..++..|+++|.|. ++ ++-...- ...+.+.++++|+.+..+.-+...|.
T Consensus 65 D~V~i~tp~~~h--~~~~~~al~~Gk~V~~EKP~~~~~~~----~~~l~~~a~~~g~~~~v~~~~r~~p~ 128 (323)
T 1xea_A 65 DAVMIHAATDVH--STLAAFFLHLGIPTFVDKPLAASAQE----CENLYELAEKHHQPLYVGFNRRHIPL 128 (323)
T ss_dssp SEEEECSCGGGH--HHHHHHHHHTTCCEEEESCSCSSHHH----HHHHHHHHHHTTCCEEEECGGGCCHH
T ss_pred CEEEEECCchhH--HHHHHHHHHCCCeEEEeCCCcCCHHH----HHHHHHHHHhcCCeEEEeeccccCHH
Confidence 999999865432 57788899999984 44 2222222 23455677888877654444444553
|
| >3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=96.26 E-value=0.0043 Score=62.50 Aligned_cols=95 Identities=13% Similarity=0.148 Sum_probs=60.4
Q ss_pred CCeEEEEcCCchHHHHHHH-HHHHcCCCCCCCceEEEE-EecChhH-HHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVR-EALKLFNFPSSPIKSLAL-AGRNPTR-VKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~-~L~~~g~~~~~~~~~v~i-agR~~~k-l~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
+++|-|+|||||+|+.+++ .|.++.- +..++.. ..|+..+ +.+ +. .. ....-|.+++++ +
T Consensus 4 ~~~VaIvGATG~vG~ellr~lL~~hp~----~~~~l~~~ss~~aG~~~~~----~~---~~--~~~v~~~~~~~~----~ 66 (377)
T 3uw3_A 4 SMNVGLVGWRGMVGSVLMQRMQEEGDF----DLIEPVFFSTSNAGGKAPS----FA---KN--ETTLKDATSIDD----L 66 (377)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGG----GGSEEEEEESSCTTSBCCT----TC---CS--CCBCEETTCHHH----H
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCC----CceEEEEEechhcCCCHHH----cC---CC--ceEEEeCCChhH----h
Confidence 4899999999999999999 6665531 1145544 4443221 111 21 11 222235555444 3
Q ss_pred cCccEEeecCCCCCCCCHHHHHHHHHhCC--cEEEecCc
Q 012947 87 SQTKLLLNCVGPYRLHGDPVAAACVHSGC--DYLDISGE 123 (452)
Q Consensus 87 ~~~dvVIn~aGp~~~~~~~vv~ac~~~g~--~yvDlsge 123 (452)
+++|+||.|.|.+. ....+....+.|+ ..||+++.
T Consensus 67 ~~vDvvf~a~~~~~--s~~~~~~~~~~G~k~~VID~ss~ 103 (377)
T 3uw3_A 67 KKCDVIITCQGGDY--TNDVFPKLRAAGWNGYWIDAASS 103 (377)
T ss_dssp HTCSEEEECSCHHH--HHHHHHHHHHTTCCSEEEECSST
T ss_pred cCCCEEEECCChHH--HHHHHHHHHHCCCCEEEEeCCcc
Confidence 68999999987432 3567778888897 79999984
|
| >3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A* | Back alignment and structure |
|---|
Probab=96.26 E-value=0.035 Score=54.44 Aligned_cols=128 Identities=13% Similarity=0.067 Sum_probs=75.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHc-CCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 11 FDVIILGASGFTGKYVVREALKL-FNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~-g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
++|.|+||+|.+|+.++..|..+ +- ..++.+.++++ +++....++.. ....+.+... .. ....+.++++
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~-----~~el~L~Di~~-~~~G~a~Dl~~-~~~~~~v~~~-~~--~~~~~~~~~a 70 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPS-----GSELSLYDIAP-VTPGVAVDLSH-IPTAVKIKGF-SG--EDATPALEGA 70 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCT-----TEEEEEECSST-THHHHHHHHHT-SCSSEEEEEE-CS--SCCHHHHTTC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCC-----CceEEEEecCC-CchhHHHHhhC-CCCCceEEEe-cC--CCcHHHhCCC
Confidence 58999999999999999999876 31 15899999987 55444444531 1111222211 11 1235678899
Q ss_pred cEEeecCCCCCCCCH---HHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhh
Q 012947 90 KLLLNCVGPYRLHGD---PVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQ 166 (452)
Q Consensus 90 dvVIn~aGp~~~~~~---~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~ 166 (452)
|+||-++|.....|+ .+++.. ...++.+.....+.+. .++++.. +-|.|+.++.+++.
T Consensus 71 Divii~ag~~rkpG~~R~dll~~N-------------~~I~~~i~~~i~~~~p--~a~vlvv----tNPvd~~t~~a~~~ 131 (312)
T 3hhp_A 71 DVVLISAGVARKPGMDRSDLFNVN-------------AGIVKNLVQQVAKTCP--KACIGII----TNPVNTTVAIAAEV 131 (312)
T ss_dssp SEEEECCSCSCCTTCCHHHHHHHH-------------HHHHHHHHHHHHHHCT--TSEEEEC----SSCHHHHHHHHHHH
T ss_pred CEEEEeCCCCCCCCCCHHHHHHHH-------------HHHHHHHHHHHHHHCC--CcEEEEe----cCcchhHHHHHHHH
Confidence 999999996554442 222222 2233444444433332 3343322 46889999985443
Q ss_pred c
Q 012947 167 W 167 (452)
Q Consensus 167 ~ 167 (452)
+
T Consensus 132 ~ 132 (312)
T 3hhp_A 132 L 132 (312)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A* | Back alignment and structure |
|---|
Probab=96.26 E-value=0.011 Score=57.50 Aligned_cols=63 Identities=14% Similarity=0.143 Sum_probs=48.5
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCccE
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKL 91 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~dv 91 (452)
+|-++|- |..|..+++.|++.| ++|.+.+|++++.+.+.+. + . ..+ +++.++++++|+
T Consensus 5 kIgfIGl-G~MG~~mA~~L~~~G-------~~v~v~dr~~~~~~~l~~~-G------a--~~a-----~s~~e~~~~~dv 62 (300)
T 3obb_A 5 QIAFIGL-GHMGAPMATNLLKAG-------YLLNVFDLVQSAVDGLVAA-G------A--SAA-----RSARDAVQGADV 62 (300)
T ss_dssp EEEEECC-STTHHHHHHHHHHTT-------CEEEEECSSHHHHHHHHHT-T------C--EEC-----SSHHHHHTTCSE
T ss_pred EEEEeee-hHHHHHHHHHHHhCC-------CeEEEEcCCHHHHHHHHHc-C------C--EEc-----CCHHHHHhcCCc
Confidence 6888885 999999999999998 8999999999999888753 1 1 111 235566667777
Q ss_pred EeecC
Q 012947 92 LLNCV 96 (452)
Q Consensus 92 VIn~a 96 (452)
||.|+
T Consensus 63 v~~~l 67 (300)
T 3obb_A 63 VISML 67 (300)
T ss_dssp EEECC
T ss_pred eeecC
Confidence 77776
|
| >2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.25 E-value=0.013 Score=57.11 Aligned_cols=92 Identities=18% Similarity=0.276 Sum_probs=62.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
.++|.|+|+ |.+|+.+++.|++.+ ++|.+.+|++++++++.+ . .+. . ..+ +.++++++
T Consensus 30 ~~~I~iIG~-G~mG~~~a~~l~~~g-------~~V~~~~~~~~~~~~~~~-~------g~~--~--~~~---~~~~~~~~ 87 (316)
T 2uyy_A 30 DKKIGFLGL-GLMGSGIVSNLLKMG-------HTVTVWNRTAEKCDLFIQ-E------GAR--L--GRT---PAEVVSTC 87 (316)
T ss_dssp SSCEEEECC-SHHHHHHHHHHHHTT-------CCEEEECSSGGGGHHHHH-T------TCE--E--CSC---HHHHHHHC
T ss_pred CCeEEEEcc-cHHHHHHHHHHHhCC-------CEEEEEeCCHHHHHHHHH-c------CCE--E--cCC---HHHHHhcC
Confidence 478999996 999999999999987 789999999998877654 2 111 1 123 44566789
Q ss_pred cEEeecCC-CCCCCCHHHHHH------HHHhCCcEEEecCcHH
Q 012947 90 KLLLNCVG-PYRLHGDPVAAA------CVHSGCDYLDISGEPE 125 (452)
Q Consensus 90 dvVIn~aG-p~~~~~~~vv~a------c~~~g~~yvDlsge~~ 125 (452)
|+||.|+. +... ..++.. ....+...||++...+
T Consensus 88 DvVi~av~~~~~~--~~v~~~~~~~~~~l~~~~~vv~~s~~~~ 128 (316)
T 2uyy_A 88 DITFACVSDPKAA--KDLVLGPSGVLQGIRPGKCYVDMSTVDA 128 (316)
T ss_dssp SEEEECCSSHHHH--HHHHHSTTCGGGGCCTTCEEEECSCCCH
T ss_pred CEEEEeCCCHHHH--HHHHcCchhHhhcCCCCCEEEECCCCCH
Confidence 99999985 2211 222221 1234566888876443
|
| >3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V} | Back alignment and structure |
|---|
Probab=96.23 E-value=0.017 Score=56.65 Aligned_cols=123 Identities=13% Similarity=0.055 Sum_probs=77.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceE-EEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKS-LALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~-v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
++++|.|+|+ |.+|+..++.|.+.+. .+ +++++|+.++++++.++++ +... . .+++++++
T Consensus 4 ~~~rigiiG~-G~ig~~~~~~l~~~~~------~~~~av~d~~~~~~~~~a~~~~------~~~~---~---~~~~~ll~ 64 (329)
T 3evn_A 4 SKVRYGVVST-AKVAPRFIEGVRLAGN------GEVVAVSSRTLESAQAFANKYH------LPKA---Y---DKLEDMLA 64 (329)
T ss_dssp -CEEEEEEBC-CTTHHHHHHHHHHHCS------EEEEEEECSCSSTTCC---CCC------CSCE---E---SCHHHHHT
T ss_pred CceEEEEEec-hHHHHHHHHHHHhCCC------cEEEEEEcCCHHHHHHHHHHcC------CCcc---c---CCHHHHhc
Confidence 3578999998 8899999999887652 55 4578999998876665432 2111 1 23566776
Q ss_pred --CccEEeecCCCCCCCCHHHHHHHHHhCCcEE-E--ecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchh
Q 012947 88 --QTKLLLNCVGPYRLHGDPVAAACVHSGCDYL-D--ISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPA 156 (452)
Q Consensus 88 --~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yv-D--lsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~ 156 (452)
++|+|+-+..+.. + ..++..|+++|.|.+ + ++....-. ..+.+.++++|+.+..+.-+--.|.
T Consensus 65 ~~~~D~V~i~tp~~~-h-~~~~~~al~aGk~Vl~EKP~a~~~~e~----~~l~~~a~~~~~~~~v~~~~r~~p~ 132 (329)
T 3evn_A 65 DESIDVIYVATINQD-H-YKVAKAALLAGKHVLVEKPFTLTYDQA----NELFALAESCNLFLMEAQKSVFIPM 132 (329)
T ss_dssp CTTCCEEEECSCGGG-H-HHHHHHHHHTTCEEEEESSCCSSHHHH----HHHHHHHHHTTCCEEEECSSCSSHH
T ss_pred CCCCCEEEECCCcHH-H-HHHHHHHHHCCCeEEEccCCcCCHHHH----HHHHHHHHHcCCEEEEEEcccCCHH
Confidence 7899998875432 3 678889999999844 2 22222222 3445677888887654433334553
|
| >2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A* | Back alignment and structure |
|---|
Probab=96.22 E-value=0.0079 Score=57.83 Aligned_cols=65 Identities=12% Similarity=0.151 Sum_probs=49.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
++|.|+|+ |.+|+.+++.|.+.+ ++|.+.+|++++++++.+. .+.+ ..+ +.++++++|
T Consensus 1 m~i~iiG~-G~mG~~~a~~l~~~g-------~~V~~~~~~~~~~~~~~~~-------g~~~----~~~---~~~~~~~~D 58 (296)
T 2gf2_A 1 MPVGFIGL-GNMGNPMAKNLMKHG-------YPLIIYDVFPDACKEFQDA-------GEQV----VSS---PADVAEKAD 58 (296)
T ss_dssp CCEEEECC-STTHHHHHHHHHHTT-------CCEEEECSSTHHHHHHHTT-------TCEE----CSS---HHHHHHHCS
T ss_pred CeEEEEec-cHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHc-------CCee----cCC---HHHHHhcCC
Confidence 36899985 999999999999987 7899999999988776541 1211 123 445667899
Q ss_pred EEeecCC
Q 012947 91 LLLNCVG 97 (452)
Q Consensus 91 vVIn~aG 97 (452)
+||.|+.
T Consensus 59 vvi~~vp 65 (296)
T 2gf2_A 59 RIITMLP 65 (296)
T ss_dssp EEEECCS
T ss_pred EEEEeCC
Confidence 9999983
|
| >3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A* | Back alignment and structure |
|---|
Probab=96.22 E-value=0.024 Score=55.84 Aligned_cols=112 Identities=13% Similarity=0.179 Sum_probs=74.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEE-EEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC-
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v-~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~- 88 (452)
++|.|+|+ |.+|+..++.|.+..+ ..++ ++++|++++++++.++++. .+.. . .++++++++
T Consensus 3 ~rigiIG~-G~~g~~~~~~l~~~~~-----~~~l~av~d~~~~~~~~~~~~~g~----~~~~----~---~~~~~ll~~~ 65 (344)
T 3mz0_A 3 LRIGVIGT-GAIGKEHINRITNKLS-----GAEIVAVTDVNQEAAQKVVEQYQL----NATV----Y---PNDDSLLADE 65 (344)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHTCS-----SEEEEEEECSSHHHHHHHHHHTTC----CCEE----E---SSHHHHHHCT
T ss_pred EEEEEECc-cHHHHHHHHHHHhhCC-----CcEEEEEEcCCHHHHHHHHHHhCC----CCee----e---CCHHHHhcCC
Confidence 68999998 8999999999984321 1665 4789999999988887630 1111 1 235666654
Q ss_pred -ccEEeecCCCCCCCCHHHHHHHHHhCCcEE-E--ecCcHHHHHHHHHHHHHHHHhCccEE
Q 012947 89 -TKLLLNCVGPYRLHGDPVAAACVHSGCDYL-D--ISGEPEFMERMEARYHEKAVETGSLL 145 (452)
Q Consensus 89 -~dvVIn~aGp~~~~~~~vv~ac~~~g~~yv-D--lsge~~~~~~~~~~~~~~A~~~gv~i 145 (452)
+|+|+.|..+. .+ ..++..|+++|.|.+ + ++-...-. ..+.+.++++|+.+
T Consensus 66 ~~D~V~i~tp~~-~h-~~~~~~al~~Gk~vl~EKP~a~~~~e~----~~l~~~a~~~g~~~ 120 (344)
T 3mz0_A 66 NVDAVLVTSWGP-AH-ESSVLKAIKAQKYVFCEKPLATTAEGC----MRIVEEEIKVGKRL 120 (344)
T ss_dssp TCCEEEECSCGG-GH-HHHHHHHHHTTCEEEECSCSCSSHHHH----HHHHHHHHHHSSCC
T ss_pred CCCEEEECCCch-hH-HHHHHHHHHCCCcEEEcCCCCCCHHHH----HHHHHHHHHHCCEE
Confidence 89999988443 33 678889999999844 2 12222222 34456677777754
|
| >2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=96.21 E-value=0.014 Score=57.69 Aligned_cols=79 Identities=10% Similarity=-0.006 Sum_probs=54.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCce-EEEEEecChhHHHHHHHHhCC---CCCCCccEEEEeCCCHHHHHHHH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIK-SLALAGRNPTRVKQALQWASP---SHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~-~v~iagR~~~kl~~l~~~l~~---~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
++|.|+|| |.+|..++..|+..+ + +|.+.++++++++....++.. .......+... +| + +.+
T Consensus 15 ~kI~ViGa-G~vG~~iA~~la~~g-------~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t--~d---~-~al 80 (328)
T 2hjr_A 15 KKISIIGA-GQIGSTIALLLGQKD-------LGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGE--NN---Y-EYL 80 (328)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT-------CCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE--SC---G-GGG
T ss_pred CEEEEECC-CHHHHHHHHHHHhCC-------CCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEEC--CC---H-HHH
Confidence 68999998 999999999999887 4 899999999888754333211 00011222221 23 3 457
Q ss_pred cCccEEeecCCCCCCCC
Q 012947 87 SQTKLLLNCVGPYRLHG 103 (452)
Q Consensus 87 ~~~dvVIn~aGp~~~~~ 103 (452)
+++|+||.++|....+|
T Consensus 81 ~~aD~VI~avg~p~k~g 97 (328)
T 2hjr_A 81 QNSDVVIITAGVPRKPN 97 (328)
T ss_dssp TTCSEEEECCSCCCCTT
T ss_pred CCCCEEEEcCCCCCCCC
Confidence 89999999998554443
|
| >2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=96.19 E-value=0.017 Score=56.57 Aligned_cols=125 Identities=16% Similarity=0.126 Sum_probs=76.9
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCce-EEEEEecChhHHHHHHHHhCC---CCCCCccEEEEeCCCHHHHHHHHc
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIK-SLALAGRNPTRVKQALQWASP---SHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~-~v~iagR~~~kl~~l~~~l~~---~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
+|.|+|| |.+|..++..|+..+ + ++.+.++++++++....++.. .....+.+... .|. +.++
T Consensus 1 KI~IiGa-G~vG~~~a~~l~~~~-------l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~----~a~~ 66 (308)
T 2d4a_B 1 MITILGA-GKVGMATAVMLMMRG-------YDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGS--NSY----EDMR 66 (308)
T ss_dssp CEEEECC-SHHHHHHHHHHHHHT-------CSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE--SCG----GGGT
T ss_pred CEEEECc-CHHHHHHHHHHHhCC-------CCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEEC--CCH----HHhC
Confidence 5899999 999999999998876 4 699999999888765555421 00113333331 232 3688
Q ss_pred CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhh
Q 012947 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQ 166 (452)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~ 166 (452)
++|+||.++|.....|+.-.+...+ ....++.+.....+.+ ..++++.. +-|-|+.++.+.+.
T Consensus 67 ~aD~Vi~~ag~~~k~G~~r~dl~~~----------n~~i~~~i~~~i~~~~--p~a~iiv~----tNPv~~~t~~~~k~ 129 (308)
T 2d4a_B 67 GSDIVLVTAGIGRKPGMTREQLLEA----------NANTMADLAEKIKAYA--KDAIVVIT----TNPVDAMTYVMYKK 129 (308)
T ss_dssp TCSEEEECCSCCCCSSCCTHHHHHH----------HHHHHHHHHHHHHHHC--TTCEEEEC----CSSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCCCCCcHHHHHHH----------HHHHHHHHHHHHHHHC--CCeEEEEe----CCchHHHHHHHHHh
Confidence 9999999999766555321111111 1233344444443333 34444432 34889999887775
|
| >1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A* | Back alignment and structure |
|---|
Probab=96.19 E-value=0.0098 Score=59.23 Aligned_cols=100 Identities=12% Similarity=0.115 Sum_probs=63.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEe----------cC---------hhHHHHHHHHhCCCCCCCcc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAG----------RN---------PTRVKQALQWASPSHSLSIP 70 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iag----------R~---------~~kl~~l~~~l~~~~~~~v~ 70 (452)
..+|+|+|+ |.+|..+++.|+..|. -++.+++ |. ..|.+.+.+.+.. ..+.+.
T Consensus 36 ~~~VlivG~-GGlG~~ia~~La~~Gv------g~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~-lnp~v~ 107 (346)
T 1y8q_A 36 ASRVLLVGL-KGLGAEIAKNLILAGV------KGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQN-LNPMVD 107 (346)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHHTC------SEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHH-TCTTSE
T ss_pred CCeEEEECC-CHHHHHHHHHHHHcCC------CEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHh-HCCCeE
Confidence 468999998 6789999999999994 4788884 32 2355555544432 123344
Q ss_pred EEE--EeCCCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEe
Q 012947 71 ILT--ADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDI 120 (452)
Q Consensus 71 ~v~--~Dl~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDl 120 (452)
+.. .++++ ...+.+++.|+||+|...... -..+.++|.+.++.+|+.
T Consensus 108 v~~~~~~~~~--~~~~~~~~~dvVv~~~d~~~~-r~~ln~~~~~~~ip~i~~ 156 (346)
T 1y8q_A 108 VKVDTEDIEK--KPESFFTQFDAVCLTCCSRDV-IVKVDQICHKNSIKFFTG 156 (346)
T ss_dssp EEEECSCGGG--CCHHHHTTCSEEEEESCCHHH-HHHHHHHHHHTTCEEEEE
T ss_pred EEEEecccCc--chHHHhcCCCEEEEcCCCHHH-HHHHHHHHHHcCCCEEEE
Confidence 333 33322 346778899999998754321 134667777776666554
|
| >3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.18 E-value=0.022 Score=57.91 Aligned_cols=129 Identities=12% Similarity=0.089 Sum_probs=80.4
Q ss_pred CCCeEEEEcCCc--hHHHHHHHHHHHcCCCCCCCceEEE--EEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH
Q 012947 9 ELFDVIILGASG--FTGKYVVREALKLFNFPSSPIKSLA--LAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHR 84 (452)
Q Consensus 9 ~~~~ilV~GATG--~iG~~va~~L~~~g~~~~~~~~~v~--iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~ 84 (452)
++++|.|+|+.. |+|+.-+..+...+. ++++ +++|++++++++.++++. ....+ .+|.+++-+
T Consensus 36 ~~~rvgiiG~G~~~~ig~~h~~~~~~~~~------~~lva~v~d~~~~~a~~~a~~~g~---~~~~~----~~~~~~ll~ 102 (417)
T 3v5n_A 36 KRIRLGMVGGGSGAFIGAVHRIAARLDDH------YELVAGALSSTPEKAEASGRELGL---DPSRV----YSDFKEMAI 102 (417)
T ss_dssp CCEEEEEESCC--CHHHHHHHHHHHHTSC------EEEEEEECCSSHHHHHHHHHHHTC---CGGGB----CSCHHHHHH
T ss_pred CcceEEEEcCCCchHHHHHHHHHHhhCCC------cEEEEEEeCCCHHHHHHHHHHcCC---Ccccc----cCCHHHHHh
Confidence 568999999854 599988888776652 5654 679999999998888752 10011 234343332
Q ss_pred HH----cCccEEeecCCCCCCCCHHHHHHHHHhCCcE-EE--ecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchh
Q 012947 85 LC----SQTKLLLNCVGPYRLHGDPVAAACVHSGCDY-LD--ISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPA 156 (452)
Q Consensus 85 ~~----~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~y-vD--lsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~ 156 (452)
-- .++|+|+-|..+. .+ ..++.+|+++|.|. |+ ++-...-. .++.+.++++|+.+..+.-+-..|.
T Consensus 103 ~~~~~~~~vD~V~I~tp~~-~H-~~~~~~al~aGkhVl~EKPla~~~~ea----~~l~~~a~~~g~~~~v~~~~R~~p~ 175 (417)
T 3v5n_A 103 REAKLKNGIEAVAIVTPNH-VH-YAAAKEFLKRGIHVICDKPLTSTLADA----KKLKKAADESDALFVLTHNYTGYPM 175 (417)
T ss_dssp HHHHCTTCCSEEEECSCTT-SH-HHHHHHHHTTTCEEEEESSSCSSHHHH----HHHHHHHHHCSSCEEEECGGGGSHH
T ss_pred cccccCCCCcEEEECCCcH-HH-HHHHHHHHhCCCeEEEECCCcCCHHHH----HHHHHHHHHcCCEEEEEecccCCHH
Confidence 21 3489999877443 33 68899999999983 43 22222222 3445677888886554433334453
|
| >3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
Probab=96.18 E-value=0.023 Score=55.50 Aligned_cols=94 Identities=12% Similarity=0.106 Sum_probs=62.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCce-EEEEEecC--hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIK-SLALAGRN--PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~-~v~iagR~--~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
.++|.|+|. |.+|..+++.|++.| + +|.+.+|+ +++.+.+.+ . .+. . .+ ++.+++
T Consensus 24 ~~~I~iIG~-G~mG~~~A~~L~~~G-------~~~V~~~dr~~~~~~~~~~~~-~------g~~--~--~~---~~~e~~ 81 (312)
T 3qsg_A 24 AMKLGFIGF-GEAASAIASGLRQAG-------AIDMAAYDAASAESWRPRAEE-L------GVS--C--KA---SVAEVA 81 (312)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHHS-------CCEEEEECSSCHHHHHHHHHH-T------TCE--E--CS---CHHHHH
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCC-------CCeEEEEcCCCCHHHHHHHHH-C------CCE--E--eC---CHHHHH
Confidence 468999986 999999999999998 6 99999997 466655443 2 111 1 22 355667
Q ss_pred cCccEEeecCCCCCCCCHHHHHHHHH---hCCcEEEecCcHHHH
Q 012947 87 SQTKLLLNCVGPYRLHGDPVAAACVH---SGCDYLDISGEPEFM 127 (452)
Q Consensus 87 ~~~dvVIn~aGp~~~~~~~vv~ac~~---~g~~yvDlsge~~~~ 127 (452)
+++|+||.|+.+... ..+++.... .+..+||.+...+-.
T Consensus 82 ~~aDvVi~~vp~~~~--~~~~~~l~~~l~~~~ivvd~st~~~~~ 123 (312)
T 3qsg_A 82 GECDVIFSLVTAQAA--LEVAQQAGPHLCEGALYADFTSCSPAV 123 (312)
T ss_dssp HHCSEEEECSCTTTH--HHHHHHHGGGCCTTCEEEECCCCCHHH
T ss_pred hcCCEEEEecCchhH--HHHHHhhHhhcCCCCEEEEcCCCCHHH
Confidence 789999999965432 223332222 355688887654433
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.16 E-value=0.013 Score=58.61 Aligned_cols=73 Identities=12% Similarity=0.081 Sum_probs=55.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
.-+|+|+|+ |.+|..+++.+...| .+|+++++++++++.+. +++. . ...|..+++.++++..++
T Consensus 195 g~~VlV~Ga-G~vG~~aiqlak~~G-------a~Vi~~~~~~~~~~~a~-~lGa------~-~vi~~~~~~~~~~~~~g~ 258 (369)
T 1uuf_A 195 GKKVGVVGI-GGLGHMGIKLAHAMG-------AHVVAFTTSEAKREAAK-ALGA------D-EVVNSRNADEMAAHLKSF 258 (369)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTT-------CEEEEEESSGGGHHHHH-HHTC------S-EEEETTCHHHHHTTTTCE
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHH-HcCC------c-EEeccccHHHHHHhhcCC
Confidence 357999998 789999999888777 78999999999986554 4642 2 235777766565555689
Q ss_pred cEEeecCCC
Q 012947 90 KLLLNCVGP 98 (452)
Q Consensus 90 dvVIn~aGp 98 (452)
|+||+++|.
T Consensus 259 Dvvid~~g~ 267 (369)
T 1uuf_A 259 DFILNTVAA 267 (369)
T ss_dssp EEEEECCSS
T ss_pred CEEEECCCC
Confidence 999999984
|
| >1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=96.16 E-value=0.013 Score=58.27 Aligned_cols=96 Identities=16% Similarity=0.153 Sum_probs=66.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEE-EEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHH---------
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPP--------- 80 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v-~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~--------- 80 (452)
++|.|.|+ |++|+.+++.|.++.. .++ .+.+|+.++...+.... .+.+... .|++
T Consensus 2 ikVgIiGa-G~iG~~~~r~L~~~p~------~elvav~d~~~~~~~~~a~~~------g~~~~~~--~~~~~~~~~~~v~ 66 (340)
T 1b7g_O 2 VNVAVNGY-GTIGKRVADAIIKQPD------MKLVGVAKTSPNYEAFIAHRR------GIRIYVP--QQSIKKFEESGIP 66 (340)
T ss_dssp EEEEEECC-SHHHHHHHHHHHTCTT------EEEEEEECSSCSHHHHHHHHT------TCCEECC--GGGHHHHHTTTCC
T ss_pred eEEEEEec-CHHHHHHHHHHHcCCC------CEEEEEEcCChHHHHHHHHhc------CcceecC--cCHHHHhcccccc
Confidence 57999999 9999999999987642 565 56677766665555442 1222211 0111
Q ss_pred ---HHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCc
Q 012947 81 ---SLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGE 123 (452)
Q Consensus 81 ---sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge 123 (452)
+++++++++|+|+.|.|++.. ....+.+.+.|+..||+++.
T Consensus 67 v~~~~e~l~~~vDvV~~aTp~~~s--~~~a~~~~~aG~kvV~~sa~ 110 (340)
T 1b7g_O 67 VAGTVEDLIKTSDIVVDTTPNGVG--AQYKPIYLQLQRNAIFQGGE 110 (340)
T ss_dssp CCCCHHHHHHHCSEEEECCSTTHH--HHHHHHHHHTTCEEEECTTS
T ss_pred cccCHhHhhcCCCEEEECCCCchh--HHHHHHHHHcCCeEEEeCCC
Confidence 233445689999999976532 56788899999999999988
|
| >3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=96.16 E-value=0.028 Score=56.53 Aligned_cols=121 Identities=13% Similarity=0.048 Sum_probs=80.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEE-EEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v-~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
+++|.|+|+.+.+|+..++.|.+... .++ ++++|++++.+++.++++ +.. .+| ++++++
T Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~------~~l~av~d~~~~~~~~~a~~~g------~~~----~~~---~~ell~~ 62 (387)
T 3moi_A 2 KIRFGICGLGFAGSVLMAPAMRHHPD------AQIVAACDPNEDVRERFGKEYG------IPV----FAT---LAEMMQH 62 (387)
T ss_dssp CEEEEEECCSHHHHTTHHHHHHHCTT------EEEEEEECSCHHHHHHHHHHHT------CCE----ESS---HHHHHHH
T ss_pred ceEEEEEeCCHHHHHHHHHHHHhCCC------eEEEEEEeCCHHHHHHHHHHcC------CCe----ECC---HHHHHcC
Confidence 47899999966899999999887642 554 578999999988888763 232 123 455554
Q ss_pred -CccEEeecCCCCCCCCHHHHHHHHHhCCcEE-E--ecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcch
Q 012947 88 -QTKLLLNCVGPYRLHGDPVAAACVHSGCDYL-D--ISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIP 155 (452)
Q Consensus 88 -~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yv-D--lsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P 155 (452)
++|+|+.+..+.. + ..++..|+++|.|.+ + ++-...-. ..+.+.|+++|+.+..+.-.--.|
T Consensus 63 ~~vD~V~i~tp~~~-H-~~~~~~al~aGk~Vl~EKP~a~~~~e~----~~l~~~a~~~g~~~~v~~~~R~~p 128 (387)
T 3moi_A 63 VQMDAVYIASPHQF-H-CEHVVQASEQGLHIIVEKPLTLSRDEA----DRMIEAVERAGVHLVVGTSRSHDP 128 (387)
T ss_dssp SCCSEEEECSCGGG-H-HHHHHHHHHTTCEEEECSCCCSCHHHH----HHHHHHHHHHTCCEEECCCGGGSH
T ss_pred CCCCEEEEcCCcHH-H-HHHHHHHHHCCCceeeeCCccCCHHHH----HHHHHHHHHhCCeEEEEeccccCH
Confidence 5899999885533 2 578899999999854 2 12222222 344566777787665443333445
|
| >3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans} | Back alignment and structure |
|---|
Probab=96.15 E-value=0.069 Score=54.83 Aligned_cols=116 Identities=13% Similarity=0.174 Sum_probs=76.8
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHHc--------CCCCCCCceE-EEEEecChhHHHHHHHHhCCCCCCCccEEEEeCC
Q 012947 7 IPELFDVIILGASGFTGKYVVREALKL--------FNFPSSPIKS-LALAGRNPTRVKQALQWASPSHSLSIPILTADTT 77 (452)
Q Consensus 7 ~~~~~~ilV~GATG~iG~~va~~L~~~--------g~~~~~~~~~-v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~ 77 (452)
|.++++|.|+| .|.+|+.+++.|.++ ++ ..+ +.+++|+.++.+.+.. ...+ . +
T Consensus 7 MMk~irIgIIG-~G~VG~~~~~~L~~~~~~l~~~~g~-----~i~lvaV~d~~~~~~~~~~~--------~~~~-~---~ 68 (444)
T 3mtj_A 7 GMKPIHVGLLG-LGTVGGGTLTVLRRNAEEITRRAGR-----EIRVVRAAVRNLDKAEALAG--------GLPL-T---T 68 (444)
T ss_dssp SCSCEEEEEEC-CHHHHHHHHHHHHHTHHHHHHHHSS-----CEEEEEEECSCHHHHHHHHT--------TCCE-E---S
T ss_pred hhCcccEEEEC-CCHHHHHHHHHHHHhHHHHHHhcCC-----CEEEEEEEECCHHHhhhhcc--------cCcc-c---C
Confidence 44678999999 699999999887642 21 144 4678899888765521 1111 1 2
Q ss_pred CHHHHHHHHc--CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEE
Q 012947 78 DPPSLHRLCS--QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLV 146 (452)
Q Consensus 78 d~~sl~~~~~--~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv 146 (452)
| ++++++ ++|+|+.|.++... ...++..|+++|.|.|--+ +.....-...+.+.|+++|+.+.
T Consensus 69 d---~~ell~d~diDvVve~tp~~~~-h~~~~~~AL~aGKhVvten--kal~a~~~~eL~~~A~~~gv~l~ 133 (444)
T 3mtj_A 69 N---PFDVVDDPEIDIVVELIGGLEP-ARELVMQAIANGKHVVTAN--KHLVAKYGNEIFAAAQAKGVMVT 133 (444)
T ss_dssp C---THHHHTCTTCCEEEECCCSSTT-HHHHHHHHHHTTCEEEECC--HHHHHHHHHHHHHHHHHHTCCEE
T ss_pred C---HHHHhcCCCCCEEEEcCCCchH-HHHHHHHHHHcCCEEEECC--cccCHHHHHHHHHHHHHhCCeEE
Confidence 2 455555 58999999874322 2577899999999977433 23333333566778888898875
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 452 | |||
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 99.35 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 99.34 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 99.33 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 99.33 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 99.33 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.33 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 99.32 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 99.32 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 99.31 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 99.31 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 99.31 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 99.31 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 99.31 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 99.3 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 99.3 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 99.3 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 99.29 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.27 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 99.27 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 99.27 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 99.27 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 99.26 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 99.25 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 99.24 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 99.24 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 99.22 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 99.22 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 99.22 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 99.22 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 99.22 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 99.21 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.21 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 99.2 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 99.19 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 99.18 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 99.18 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 99.16 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 99.16 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 99.14 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 99.14 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.1 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 99.09 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 99.07 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 99.06 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 99.05 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 99.05 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 99.05 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 99.04 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 99.01 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 98.99 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 98.99 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 98.99 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 98.98 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 98.98 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 98.97 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 98.96 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 98.95 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 98.94 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 98.94 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 98.94 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 98.93 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 98.92 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 98.9 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 98.87 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 98.87 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 98.85 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 98.81 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 98.78 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 98.78 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 98.77 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 98.76 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 98.74 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 98.69 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 98.68 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 98.67 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 98.66 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 98.66 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 98.63 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 98.62 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 98.6 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 98.56 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 98.54 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 98.52 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 98.51 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 98.46 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 98.45 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 98.41 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 98.39 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 98.38 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 98.35 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 98.35 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 98.32 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 98.32 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 98.16 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 98.12 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 98.02 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 98.0 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 97.97 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 97.83 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 97.8 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 97.76 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 97.67 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 97.67 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 97.67 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 97.66 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 97.63 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 97.63 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 97.59 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 97.58 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 97.57 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 97.51 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 97.5 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 97.5 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 97.5 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 97.43 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 97.41 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 97.4 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 97.36 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 97.3 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 97.25 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 97.23 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 97.21 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 97.2 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 97.19 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 97.18 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 97.16 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 97.14 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 97.13 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 97.11 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 97.08 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 97.03 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 97.03 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 97.02 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 96.99 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 96.98 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 96.97 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 96.95 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 96.92 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 96.89 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 96.89 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 96.89 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 96.85 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 96.81 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 96.79 | |
| d1nvmb1 | 157 | Acetaldehyde dehydrogenase (acylating) {Pseudomona | 96.68 | |
| d1u8xx1 | 167 | Maltose-6'-phosphate glucosidase GlvA {Bacillus su | 96.63 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 96.62 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 96.62 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 96.61 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 96.55 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 96.55 | |
| d1h6da1 | 221 | Glucose-fructose oxidoreductase, N-terminal domain | 96.55 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 96.49 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 96.48 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 96.47 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 96.45 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 96.45 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 96.38 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 96.38 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 96.37 | |
| d1j5pa4 | 132 | Hypothetical protein TM1643 {Thermotoga maritima [ | 96.36 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 96.36 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 96.24 | |
| d1tlta1 | 164 | Virulence factor MviM {Escherichia coli [TaxId: 56 | 96.22 | |
| d1ydwa1 | 184 | Probable oxidoreductase At4g09670 {Thale cress (Ar | 96.21 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 96.21 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 96.21 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 96.18 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 96.16 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 96.11 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 96.06 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 96.05 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 96.02 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 96.01 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 95.91 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 95.88 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 95.84 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 95.84 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 95.72 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 95.55 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 95.5 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 95.47 | |
| d1xeaa1 | 167 | Putative oxidoreductase VCA1048 {Vibrio cholerae [ | 95.46 | |
| d2cvza2 | 156 | Hydroxyisobutyrate dehydrogenase {Thermus thermoph | 95.42 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 95.4 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 95.23 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 95.17 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 95.13 | |
| d1zh8a1 | 181 | Hypothetical protein TM0312 {Thermotoga maritima [ | 95.03 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 94.98 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 94.92 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 94.9 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 94.79 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 94.74 | |
| d1obba1 | 171 | Alpha-glucosidase AglA {Thermotoga maritima [TaxId | 94.67 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 94.51 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 94.43 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 94.42 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 94.35 | |
| d1s6ya1 | 169 | 6-phospho-beta-glucosidase {Bacillus stearothermop | 94.26 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 94.15 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 94.11 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 94.03 | |
| d1d5ta1 | 336 | Guanine nucleotide dissociation inhibitor, GDI {Co | 93.62 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 93.49 | |
| d2i76a2 | 153 | Hypothetical protein TM1727 {Thermotoga maritima [ | 93.46 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 93.35 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 92.89 | |
| d1up7a1 | 162 | 6-phospho-beta-glucosidase {Thermotoga maritima [T | 92.87 | |
| d2czca2 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 92.78 | |
| d2csua1 | 129 | Acetate-CoA ligase alpha chain, AcdA, N-terminal d | 92.51 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 92.44 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 92.35 | |
| d2nvwa1 | 237 | Galactose/lactose metabolism regulatory protein GA | 92.17 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 92.13 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 92.08 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 91.43 | |
| d1x7da_ | 340 | Ornithine cyclodeaminase {Pseudomonas putida [TaxI | 90.75 | |
| d1b7go1 | 178 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 90.32 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 90.01 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 89.89 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 89.51 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 89.35 | |
| d1gesa1 | 217 | Glutathione reductase {Escherichia coli [TaxId: 56 | 89.21 | |
| d1yova1 | 529 | Amyloid beta precursor protein-binding protein 1, | 88.95 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 88.61 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 88.49 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 88.24 | |
| d1v59a1 | 233 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 88.06 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 87.94 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 87.9 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 87.79 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 87.74 | |
| d3lada1 | 229 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 87.52 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 87.27 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 87.24 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 87.19 | |
| d1y81a1 | 116 | Hypothetical protein PF0725 {Pyrococcus furiosus [ | 87.16 | |
| d1dxla1 | 221 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 86.96 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 86.92 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 86.88 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 86.73 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 86.58 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 86.47 | |
| d2dt5a2 | 126 | Transcriptional repressor Rex, C-terminal domain { | 86.47 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 86.18 | |
| d2i0za1 | 251 | Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396] | 86.17 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 86.06 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 85.99 | |
| d1vjta1 | 193 | Putative alpha-glucosidase TM0752 {Thermotoga mari | 85.98 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 85.62 | |
| d1w4xa1 | 298 | Phenylacetone monooxygenase {Thermobifida fusca [T | 85.49 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 85.24 | |
| d2vapa1 | 209 | Cell-division protein FtsZ {Archaeon Methanococcus | 84.8 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 84.8 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 84.69 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 84.31 | |
| d1omoa_ | 320 | Archaeal alanine dehydrogenase {Archaeon Archaeogl | 84.27 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 84.1 | |
| d2gqfa1 | 253 | Hypothetical protein HI0933 {Haemophilus influenza | 83.96 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 83.87 | |
| d1y0pa2 | 308 | Flavocytochrome c3 (respiratory fumarate reductase | 83.68 | |
| d1lc0a1 | 172 | Biliverdin reductase {Rat (Rattus norvegicus) [Tax | 83.59 | |
| d3c96a1 | 288 | Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: | 83.56 | |
| d1i8ta1 | 298 | UDP-galactopyranose mutase, N-terminal domain {Esc | 83.17 | |
| d2f5va1 | 379 | Pyranose 2-oxidase {White-rot fungus (Peniophora s | 82.88 | |
| d1w5fa1 | 194 | Cell-division protein FtsZ {Thermotoga maritima [T | 82.86 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 82.51 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 82.47 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 82.47 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 82.38 | |
| d1nhpa1 | 198 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 82.2 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 82.19 | |
| d1lvla1 | 220 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 82.14 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 81.93 | |
| d2dw4a2 | 449 | Lysine-specific histone demethylase 1, LSD1 {Human | 81.59 | |
| d1dlja2 | 196 | UDP-glucose dehydrogenase (UDPGDH) {Streptococcus | 81.36 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 81.05 | |
| d1cf2o1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 80.99 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 80.71 | |
| d1rq2a1 | 198 | Cell-division protein FtsZ {Mycobacterium tubercul | 80.58 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 80.37 |
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.35 E-value=6.3e-13 Score=125.78 Aligned_cols=80 Identities=16% Similarity=0.161 Sum_probs=72.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+++||+.+++.|+++| ++|++.+|+.++++++.++++ .++..+.+|++|+++++++++
T Consensus 5 gK~alVTGas~GIG~aia~~la~~G-------a~V~~~~r~~~~l~~~~~~~~----~~~~~~~~Dvt~~~~v~~~~~~~ 73 (256)
T d1k2wa_ 5 GKTALITGSARGIGRAFAEAYVREG-------ARVAIADINLEAARATAAEIG----PAACAIALDVTDQASIDRCVAEL 73 (256)
T ss_dssp TEEEEEETCSSHHHHHHHHHHHHTT-------EEEEEEESCHHHHHHHHHHHC----TTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHhC----CceEEEEeeCCCHHHHHHHHHHH
Confidence 3579999999999999999999999 899999999999999999984 467889999999999998876
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
+.|++|||||...
T Consensus 74 ~~~~g~iDilVnnAg~~~ 91 (256)
T d1k2wa_ 74 LDRWGSIDILVNNAALFD 91 (256)
T ss_dssp HHHHSCCCEEEECCCCCC
T ss_pred HHHhCCccEEEeeccccc
Confidence 5799999999654
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=99.34 E-value=2.3e-12 Score=121.69 Aligned_cols=109 Identities=13% Similarity=0.096 Sum_probs=83.1
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-----
Q 012947 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS----- 87 (452)
Q Consensus 13 ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~----- 87 (452)
+|||||+++||+.+++.|+++| ++|++.+|++++++++.+++.. ...++..+.+|++|+++++++++
T Consensus 4 alITGas~GIG~aia~~la~~G-------a~V~~~~r~~~~l~~~~~~i~~-~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 75 (255)
T d1gega_ 4 ALVTGAGQGIGKAIALRLVKDG-------FAVAIADYNDATAKAVASEINQ-AGGHAVAVKVDVSDRDQVFAAVEQARKT 75 (255)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEcCCccHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 6999999999999999999999 8999999999999998887743 23577888999999999998876
Q ss_pred --CccEEeecCCCCCC-----CCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHH
Q 012947 88 --QTKLLLNCVGPYRL-----HGDPVAAACVHSGCDYLDISGEPEFMERMEARY 134 (452)
Q Consensus 88 --~~dvVIn~aGp~~~-----~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~ 134 (452)
+.|++|||||.... ......+...+ +++.+....++..++.+
T Consensus 76 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~-----vNl~g~~~~~~~~~~~m 124 (255)
T d1gega_ 76 LGGFDVIVNNAGVAPSTPIESITPEIVDKVYN-----INVKGVIWGIQAAVEAF 124 (255)
T ss_dssp TTCCCEEEECCCCCCCBCGGGCCHHHHHHHHH-----HHTHHHHHHHHHHHHHH
T ss_pred hCCccEEEecccccccCcHHHhhhhhhhhhhh-----hcccchhhhhhhhcchh
Confidence 57999999995432 22333333333 34555555556654443
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.33 E-value=1e-12 Score=123.50 Aligned_cols=142 Identities=18% Similarity=0.151 Sum_probs=98.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
-..++||||+++||+.+++.|+++| ++|++.+|+.++++++.+++.. ...++..+.+|++|+++++++++
T Consensus 7 Gkv~lITGas~GIG~~ia~~la~~G-------~~V~l~~r~~~~l~~~~~~~~~-~~~~~~~~~~Dvs~~~~v~~~~~~i 78 (244)
T d1yb1a_ 7 GEIVLITGAGHGIGRLTAYEFAKLK-------SKLVLWDINKHGLEETAAKCKG-LGAKVHTFVVDCSNREDIYSSAKKV 78 (244)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEeeCCCHHHHHHHHHHH
Confidence 4579999999999999999999999 8999999999999999887742 24578899999999999998876
Q ss_pred -----CccEEeecCCCCCCCC-----HHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEE-E-cCCCCCcch
Q 012947 88 -----QTKLLLNCVGPYRLHG-----DPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLL-V-SACGFDSIP 155 (452)
Q Consensus 88 -----~~dvVIn~aGp~~~~~-----~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~i-v-~~~G~~s~P 155 (452)
+.|++|||||...... ....+... .+++.|....++..++.+.+ ++.|.+| + +..|+.+.|
T Consensus 79 ~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~-----~vN~~g~~~l~~~~lp~m~~--~~~G~Iv~isS~~~~~~~~ 151 (244)
T d1yb1a_ 79 KAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTF-----EVNVLAHFWTTKAFLPAMTK--NNHGHIVTVASAAGHVSVP 151 (244)
T ss_dssp HHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHH-----HHHTHHHHHHHHHHHHHHHH--TTCEEEEEECCCC-CCCHH
T ss_pred HHHcCCCceeEeeccccccccccccchhHHHhhc-----ceeeeccHHHHHHHhhhHHh--cCCceEEEeecchhcCCCC
Confidence 5799999999754432 11222222 23555656666666554432 3334333 2 444555555
Q ss_pred hhHHHHHHhhhc
Q 012947 156 AELGVMFNSRQW 167 (452)
Q Consensus 156 ~dl~~~~~~~~~ 167 (452)
...+|.++|.-
T Consensus 152 -~~~~Y~asKaa 162 (244)
T d1yb1a_ 152 -FLLAYCSSKFA 162 (244)
T ss_dssp -HHHHHHHHHHH
T ss_pred -CcHHHHHHHHH
Confidence 34556554443
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.33 E-value=5.1e-13 Score=125.68 Aligned_cols=109 Identities=11% Similarity=0.021 Sum_probs=84.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+++||+.+++.|+++| ++|++.+|++++++++.+++. .++..+.+|++|+++++++++
T Consensus 6 gK~alITGas~GIG~aia~~la~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~ 74 (244)
T d1nffa_ 6 GKVALVSGGARGMGASHVRAMVAEG-------AKVVFGDILDEEGKAMAAELA----DAARYVHLDVTQPAQWKAAVDTA 74 (244)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHTG----GGEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHhh----CcceEEEeecCCHHHHHHHHHHH
Confidence 4679999999999999999999999 899999999999999999874 467888999999999988876
Q ss_pred -----CccEEeecCCCCCCC-----CHHHHHHHHHhCCcEEEecCcHHHHHHHHHHH
Q 012947 88 -----QTKLLLNCVGPYRLH-----GDPVAAACVHSGCDYLDISGEPEFMERMEARY 134 (452)
Q Consensus 88 -----~~dvVIn~aGp~~~~-----~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~ 134 (452)
..|++|||||..... .....+...+ +++.+....++...+.+
T Consensus 75 ~~~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~-----vNl~~~~~~~~~~~~~m 126 (244)
T d1nffa_ 75 VTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILD-----VNLTGVFLGIRAVVKPM 126 (244)
T ss_dssp HHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHH-----HHTHHHHHHHHHHHHHH
T ss_pred HHHhCCCeEEEECCcccCCCchhhCCHHHHhHHhh-----cccchhhHHHHHHHhHH
Confidence 579999999965431 2223333322 44555555555554443
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.33 E-value=4.4e-13 Score=126.87 Aligned_cols=140 Identities=16% Similarity=0.127 Sum_probs=96.9
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc----
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~---- 87 (452)
.+|||||+++||+.+++.|+++| ++|++.+|++++++++.+++.. ...++..+.+|++|+++++++++
T Consensus 4 ValITGas~GIG~aia~~la~~G-------a~V~i~~r~~~~l~~~~~~l~~-~g~~~~~~~~Dvs~~~~v~~~~~~~~~ 75 (257)
T d2rhca1 4 VALVTGATSGIGLEIARRLGKEG-------LRVFVCARGEEGLRTTLKELRE-AGVEADGRTCDVRSVPEIEALVAAVVE 75 (257)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence 47999999999999999999999 8999999999999998888743 23577889999999999998876
Q ss_pred ---CccEEeecCCCCCCC-----CHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEE--cCCCCCcchhh
Q 012947 88 ---QTKLLLNCVGPYRLH-----GDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLV--SACGFDSIPAE 157 (452)
Q Consensus 88 ---~~dvVIn~aGp~~~~-----~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv--~~~G~~s~P~d 157 (452)
+.|++|||||..... .....+...+ +++.+....++..++.+....+..|.+|. +..++.+.| .
T Consensus 76 ~~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~-----vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~-~ 149 (257)
T d2rhca1 76 RYGPVDVLVNNAGRPGGGATAELADELWLDVVE-----TNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVV-H 149 (257)
T ss_dssp HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHH-----HHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCT-T
T ss_pred HhCCCCEEEecccccCCCChHHcCHHHHHHHHH-----HHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccc-c
Confidence 579999999964332 1222333222 34555555666654433344444454433 333554555 3
Q ss_pred HHHHHHhh
Q 012947 158 LGVMFNSR 165 (452)
Q Consensus 158 l~~~~~~~ 165 (452)
..+|.++|
T Consensus 150 ~~~Y~asK 157 (257)
T d2rhca1 150 AAPYSASK 157 (257)
T ss_dssp CHHHHHHH
T ss_pred chhHHHHH
Confidence 44554443
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.33 E-value=1.7e-12 Score=118.20 Aligned_cols=75 Identities=15% Similarity=0.254 Sum_probs=67.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
.+|+|+||||++|++++++|+++| ++|.+..|+.++++.. ...+++++.+|++|.+++.++++++|
T Consensus 4 kkIlV~GatG~iG~~v~~~Ll~~g-------~~V~~~~R~~~~~~~~-------~~~~~~~~~gD~~d~~~l~~al~~~d 69 (205)
T d1hdoa_ 4 KKIAIFGATGQTGLTTLAQAVQAG-------YEVTVLVRDSSRLPSE-------GPRPAHVVVGDVLQAADVDKTVAGQD 69 (205)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEESCGGGSCSS-------SCCCSEEEESCTTSHHHHHHHHTTCS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCc-------CEEEEEEcChhhcccc-------cccccccccccccchhhHHHHhcCCC
Confidence 479999999999999999999998 8999999999986432 13578999999999999999999999
Q ss_pred EEeecCCCC
Q 012947 91 LLLNCVGPY 99 (452)
Q Consensus 91 vVIn~aGp~ 99 (452)
+|||++|+.
T Consensus 70 ~vi~~~g~~ 78 (205)
T d1hdoa_ 70 AVIVLLGTR 78 (205)
T ss_dssp EEEECCCCT
T ss_pred EEEEEeccC
Confidence 999999864
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=99.32 E-value=3e-12 Score=121.81 Aligned_cols=83 Identities=14% Similarity=0.169 Sum_probs=73.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
+...+|||||+++||+.+++.|+++| ++|++++|++++++++.+++.. ...+.++.+|++|+++++++++
T Consensus 5 ~gKvalITGas~GIG~aia~~la~~G-------a~V~i~~r~~~~~~~~~~~l~~--~~~~~~~~~Dv~~~~~v~~~~~~ 75 (268)
T d2bgka1 5 QDKVAIITGGAGGIGETTAKLFVRYG-------AKVVIADIADDHGQKVCNNIGS--PDVISFVHCDVTKDEDVRNLVDT 75 (268)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHCC--TTTEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHhcC--CCceEEEEccCCCHHHHHHHHHH
Confidence 34679999999999999999999999 8999999999999999999863 4567788999999999998876
Q ss_pred ------CccEEeecCCCCC
Q 012947 88 ------QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (452)
+.|++|||||...
T Consensus 76 ~~~~~g~iD~lVnnAG~~~ 94 (268)
T d2bgka1 76 TIAKHGKLDIMFGNVGVLS 94 (268)
T ss_dssp HHHHHSCCCEEEECCCCCC
T ss_pred HHHHcCCcceecccccccc
Confidence 5799999999643
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=99.32 E-value=7.8e-13 Score=125.11 Aligned_cols=136 Identities=18% Similarity=0.064 Sum_probs=94.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+++||+.+++.|+++| ++|++.+|+.++++++.++++ .++..+.+|++|+++++++++
T Consensus 5 gK~alVTGas~GIG~aia~~la~~G-------a~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~ 73 (254)
T d1hdca_ 5 GKTVIITGGARGLGAEAARQAVAAG-------ARVVLADVLDEEGAATARELG----DAARYQHLDVTIEEDWQRVVAYA 73 (254)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHTTG----GGEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHhC----CceEEEEcccCCHHHHHHHHHHH
Confidence 4679999999999999999999999 899999999999999988873 467899999999999998876
Q ss_pred -----CccEEeecCCCCCCC-----CHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEE--cCCCCCcch
Q 012947 88 -----QTKLLLNCVGPYRLH-----GDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLV--SACGFDSIP 155 (452)
Q Consensus 88 -----~~dvVIn~aGp~~~~-----~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv--~~~G~~s~P 155 (452)
+.|++|||||..... .....+...+ +++.+....++.+++.+. .++.|.+|. +..++.+.|
T Consensus 74 ~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~-----vN~~~~~~~~~~~~p~m~--~~~~G~II~isS~~~~~~~~ 146 (254)
T d1hdca_ 74 REEFGSVDGLVNNAGISTGMFLETESVERFRKVVE-----INLTGVFIGMKTVIPAMK--DAGGGSIVNISSAAGLMGLA 146 (254)
T ss_dssp HHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHH-----HHTHHHHHHHHHHHHHHH--HHTCEEEEEECCGGGTSCCT
T ss_pred HHHcCCccEEEecCccccccccccccccccchhhh-----HHhhHHHHHHHHHHHHHh--hcCCCeecccccchhccccc
Confidence 579999999965432 2223333322 345555556666554443 233444433 233444444
Q ss_pred hhHHHHHHh
Q 012947 156 AELGVMFNS 164 (452)
Q Consensus 156 ~dl~~~~~~ 164 (452)
...+|.++
T Consensus 147 -~~~~Y~as 154 (254)
T d1hdca_ 147 -LTSSYGAS 154 (254)
T ss_dssp -TCHHHHHH
T ss_pred -chhhHHHH
Confidence 33444433
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=99.31 E-value=7.5e-13 Score=124.95 Aligned_cols=112 Identities=14% Similarity=0.066 Sum_probs=86.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
+...+|||||+++||+.+++.|+++| ++|++.+|+.++++++.+++.. ..++.++.+|++|+++++++++
T Consensus 5 ~gK~alVTGas~GIG~aia~~la~~G-------a~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~ 75 (251)
T d1zk4a1 5 DGKVAIITGGTLGIGLAIATKFVEEG-------AKVMITGRHSDVGEKAAKSVGT--PDQIQFFQHDSSDEDGWTKLFDA 75 (251)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHCC--TTTEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHhCC--CCcEEEEEccCCCHHHHHHHHHH
Confidence 34689999999999999999999999 8999999999999999998863 4578899999999999988876
Q ss_pred ------CccEEeecCCCCCCC-----CHHHHHHHHHhCCcEEEecCcHHHHHHHHHHH
Q 012947 88 ------QTKLLLNCVGPYRLH-----GDPVAAACVHSGCDYLDISGEPEFMERMEARY 134 (452)
Q Consensus 88 ------~~dvVIn~aGp~~~~-----~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~ 134 (452)
+.|++|||||..... .....+...+ +++.+....++..++.+
T Consensus 76 ~~~~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~-----vnl~g~~~~~~~~~~~m 128 (251)
T d1zk4a1 76 TEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLA-----VNLDGVFFGTRLGIQRM 128 (251)
T ss_dssp HHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHH-----HHTHHHHHHHHHHHHHH
T ss_pred HHHHhCCceEEEeccccccccchhcccccchhhhcc-----ccccccchhHHHHHHHH
Confidence 579999999975432 2222222222 34555555556554443
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.31 E-value=1.6e-12 Score=122.04 Aligned_cols=79 Identities=14% Similarity=0.070 Sum_probs=71.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...+|||||+++||+.+++.|+++| ++|++.+|++++++++.+++ .++..+.+|++|+++++++++
T Consensus 5 GK~alITGas~GIG~aia~~la~~G-------a~V~~~~r~~~~l~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~ 72 (242)
T d1cyda_ 5 GLRALVTGAGKGIGRDTVKALHASG-------AKVVAVTRTNSDLVSLAKEC-----PGIEPVCVDLGDWDATEKALGGI 72 (242)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHS-----TTCEEEECCTTCHHHHHHHHTTC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHhc-----CCCeEEEEeCCCHHHHHHHHHHc
Confidence 3579999999999999999999999 89999999999999998876 367889999999999999988
Q ss_pred -CccEEeecCCCCC
Q 012947 88 -QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -~~dvVIn~aGp~~ 100 (452)
+.|+||||||...
T Consensus 73 g~iDilVnnAg~~~ 86 (242)
T d1cyda_ 73 GPVDLLVNNAALVI 86 (242)
T ss_dssp CCCSEEEECCCCCC
T ss_pred CCCeEEEECCcccc
Confidence 5799999999643
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.31 E-value=1.5e-12 Score=122.38 Aligned_cols=79 Identities=16% Similarity=0.100 Sum_probs=71.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+++||+++++.|+++| ++|++.+|++++++++.+++. ++..+.+|++|+++++++++
T Consensus 7 GK~~lITGas~GIG~aia~~la~~G-------~~V~~~~r~~~~l~~~~~~~~-----~~~~~~~Dv~d~~~v~~~~~~~ 74 (244)
T d1pr9a_ 7 GRRVLVTGAGKGIGRGTVQALHATG-------ARVVAVSRTQADLDSLVRECP-----GIEPVCVDLGDWEATERALGSV 74 (244)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHST-----TCEEEECCTTCHHHHHHHHTTC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcC-------CEEEEEECCHHHHHHHHHhcC-----CCeEEEEeCCCHHHHHHHHHHh
Confidence 4689999999999999999999999 899999999999999988863 57889999999999999987
Q ss_pred -CccEEeecCCCCC
Q 012947 88 -QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -~~dvVIn~aGp~~ 100 (452)
+.|++|||||...
T Consensus 75 g~iDilVnnAg~~~ 88 (244)
T d1pr9a_ 75 GPVDLLVNNAAVAL 88 (244)
T ss_dssp CCCCEEEECCCCCC
T ss_pred CCceEEEecccccc
Confidence 5799999998654
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=99.31 E-value=3.2e-13 Score=127.60 Aligned_cols=113 Identities=14% Similarity=0.083 Sum_probs=82.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+++||+.+|+.|+++| ++|++.+|+.++++++.+++......++..+.+|++|+++++++++
T Consensus 5 gK~~lITGas~GIG~aia~~la~~G-------a~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~ 77 (251)
T d1vl8a_ 5 GRVALVTGGSRGLGFGIAQGLAEAG-------CSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAV 77 (251)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHH
Confidence 4579999999999999999999999 8999999999998887766532113467788999999999988876
Q ss_pred -----CccEEeecCCCCCCC-----CHHHHHHHHHhCCcEEEecCcHHHHHHHHHHH
Q 012947 88 -----QTKLLLNCVGPYRLH-----GDPVAAACVHSGCDYLDISGEPEFMERMEARY 134 (452)
Q Consensus 88 -----~~dvVIn~aGp~~~~-----~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~ 134 (452)
+.|++|||||..... .....+...+ +++.+....++..++.+
T Consensus 78 ~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~-----vNl~~~~~~~~~~~~~m 129 (251)
T d1vl8a_ 78 KEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIE-----VNLFGTYYVCREAFSLL 129 (251)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH-----HHTHHHHHHHHHHHHHH
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHH-----hhhhhhhhhhhhhhhcc
Confidence 579999999964332 1222222222 34455555566654443
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=99.31 E-value=4.2e-12 Score=120.23 Aligned_cols=140 Identities=13% Similarity=0.075 Sum_probs=93.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~-~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++||||+++||+.+++.|+++| ++|++++|+.++++++.+++.. ....++..+.+|++|+++++++++
T Consensus 4 gK~alITGas~GIG~aia~~la~~G-------a~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~ 76 (258)
T d1iy8a_ 4 DRVVLITGGGSGLGRATAVRLAAEG-------AKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTA 76 (258)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHH
Confidence 3579999999999999999999999 8999999999999887766532 123467788999999999988876
Q ss_pred ------CccEEeecCCCCCCCC------HHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEE--cCCCCCc
Q 012947 88 ------QTKLLLNCVGPYRLHG------DPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLV--SACGFDS 153 (452)
Q Consensus 88 ------~~dvVIn~aGp~~~~~------~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv--~~~G~~s 153 (452)
+.|+||||||.....+ ..-.+...+ +++.+....++...+.+. .+..|.+|. +..++.+
T Consensus 77 ~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~-----vNl~g~~~~~~~~~~~m~--~~~~G~Ii~isS~~~~~~ 149 (258)
T d1iy8a_ 77 TTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVS-----INLRGVFLGLEKVLKIMR--EQGSGMVVNTASVGGIRG 149 (258)
T ss_dssp HHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHH-----HHTHHHHHHHHHHHHHHH--HHTCCEEEEECCGGGTSB
T ss_pred HHHHhCCCCEEEECCcccccCCchhhhhhhHHHHHhh-----hhccchhhhhhhhHhhhh--hhcCCCCcccccHhhccC
Confidence 5799999999653321 222222222 344555555555443332 334454433 2334444
Q ss_pred chhhHHHHHHh
Q 012947 154 IPAELGVMFNS 164 (452)
Q Consensus 154 ~P~dl~~~~~~ 164 (452)
.| ...+|.++
T Consensus 150 ~~-~~~~Y~as 159 (258)
T d1iy8a_ 150 IG-NQSGYAAA 159 (258)
T ss_dssp CS-SBHHHHHH
T ss_pred CC-CchHHHHH
Confidence 44 34444443
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.30 E-value=1.2e-12 Score=123.90 Aligned_cols=85 Identities=15% Similarity=0.123 Sum_probs=72.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHc
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~-~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
+...++||||+++||+.+|+.|+++| ++|++++|+.++++++.+++... ...++..+.+|++|+++++++++
T Consensus 9 k~Kv~lITGas~GIG~aiA~~la~~G-------~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~ 81 (257)
T d1xg5a_ 9 RDRLALVTGASGGIGAAVARALVQQG-------LKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFS 81 (257)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHH
Confidence 35679999999999999999999999 89999999999999988887531 12466788999999999988776
Q ss_pred -------CccEEeecCCCCC
Q 012947 88 -------QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -------~~dvVIn~aGp~~ 100 (452)
+.|++|||||...
T Consensus 82 ~~~~~~g~iD~lVnnAg~~~ 101 (257)
T d1xg5a_ 82 AIRSQHSGVDICINNAGLAR 101 (257)
T ss_dssp HHHHHHCCCSEEEECCCCCC
T ss_pred HHHHhcCCCCEEEecccccC
Confidence 5799999999754
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=99.30 E-value=7.3e-13 Score=124.23 Aligned_cols=117 Identities=17% Similarity=0.169 Sum_probs=84.4
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-----
Q 012947 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS----- 87 (452)
Q Consensus 13 ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~----- 87 (452)
+|||||+++||+.+++.|+++|-.-......|++.+|+.++++++.+++.. ...++..+.+|++|+++++++++
T Consensus 4 vlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~-~g~~~~~~~~Dvt~~~~v~~~~~~~~~~ 82 (240)
T d2bd0a1 4 LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRA-EGALTDTITADISDMADVRRLTTHIVER 82 (240)
T ss_dssp EEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHT-TTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 789999999999999999999820000012389999999999999888753 23567788999999999988876
Q ss_pred --CccEEeecCCCCCCC-----CHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHH
Q 012947 88 --QTKLLLNCVGPYRLH-----GDPVAAACVHSGCDYLDISGEPEFMERMEARYH 135 (452)
Q Consensus 88 --~~dvVIn~aGp~~~~-----~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~ 135 (452)
+.|+||||||..... ...-++...+ +++.|....++..++.+.
T Consensus 83 ~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~-----vNl~g~~~~~~~~~~~m~ 132 (240)
T d2bd0a1 83 YGHIDCLVNNAGVGRFGALSDLTEEDFDYTMN-----TNLKGTFFLTQALFALME 132 (240)
T ss_dssp TSCCSEEEECCCCCCCCCGGGCCHHHHHHHHH-----HHTHHHHHHHHHHHHHHH
T ss_pred cCCcceeecccccccCCccccCCHHHHhhcCC-----EeehHHHHHHHHHhHHHH
Confidence 579999999965432 2333333333 455666666677665544
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=99.30 E-value=3.6e-12 Score=120.75 Aligned_cols=140 Identities=14% Similarity=0.158 Sum_probs=96.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...+|||||+++||+.+++.|+++| ++|++++|++++++++.+++.. ...++..+.+|++|+++++++++
T Consensus 5 gK~alITGas~GIG~aia~~la~~G-------a~V~~~~r~~~~l~~~~~~~~~-~g~~~~~~~~Dv~~~~~v~~~~~~~ 76 (260)
T d1zema1 5 GKVCLVTGAGGNIGLATALRLAEEG-------TAIALLDMNREALEKAEASVRE-KGVEARSYVCDVTSEEAVIGTVDSV 76 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHT-TTSCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHH
Confidence 4579999999999999999999999 8999999999999998888753 24577889999999999988876
Q ss_pred -----CccEEeecCCCCCCCC------HHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEE-cC-CCCCcc
Q 012947 88 -----QTKLLLNCVGPYRLHG------DPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLV-SA-CGFDSI 154 (452)
Q Consensus 88 -----~~dvVIn~aGp~~~~~------~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv-~~-~G~~s~ 154 (452)
+.|++|||||.....+ ....+...+ +++.+....++...+.+. .+..|.+|. ++ .|+.+.
T Consensus 77 ~~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~-----vnl~~~~~~~~~~~~~m~--~~~~G~II~isS~~~~~~~ 149 (260)
T d1zema1 77 VRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLT-----INVTGAFHVLKAVSRQMI--TQNYGRIVNTASMAGVKGP 149 (260)
T ss_dssp HHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHH-----HHTHHHHHHHHHHHHHHH--HHTCEEEEEECCHHHHSCC
T ss_pred HHHhCCCCeehhhhccccccCccccccHHHHHhhcc-----ccccccccchhhHHhhhh--hhcCCCCCeeechhhccCC
Confidence 5799999999643322 222333332 344555555666544433 334454433 22 334344
Q ss_pred hhhHHHHHHhh
Q 012947 155 PAELGVMFNSR 165 (452)
Q Consensus 155 P~dl~~~~~~~ 165 (452)
| ...+|.++|
T Consensus 150 ~-~~~~Y~asK 159 (260)
T d1zema1 150 P-NMAAYGTSK 159 (260)
T ss_dssp T-TBHHHHHHH
T ss_pred c-chHHHHHHH
Confidence 4 344454433
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.29 E-value=2e-12 Score=121.33 Aligned_cols=78 Identities=19% Similarity=0.149 Sum_probs=69.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+++||+.+++.|+++| ++|++.+|++++++++.+++ +...+.+|++|+++++++++
T Consensus 5 gK~~lITGas~GIG~aia~~l~~~G-------~~V~~~~r~~~~l~~~~~~~------~~~~~~~Dv~~~~~v~~~~~~~ 71 (242)
T d1ulsa_ 5 DKAVLITGAAHGIGRATLELFAKEG-------ARLVACDIEEGPLREAAEAV------GAHPVVMDVADPASVERGFAEA 71 (242)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHTT------TCEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHc------CCeEEEEecCCHHHHHHHHHHH
Confidence 4579999999999999999999999 89999999999999988865 45788999999999998876
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
+.|++|||||...
T Consensus 72 ~~~~g~iDilVnnAG~~~ 89 (242)
T d1ulsa_ 72 LAHLGRLDGVVHYAGITR 89 (242)
T ss_dssp HHHHSSCCEEEECCCCCC
T ss_pred HHhcCCceEEEECCcccc
Confidence 5799999999654
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=99.27 E-value=1.4e-12 Score=123.55 Aligned_cols=83 Identities=18% Similarity=0.183 Sum_probs=71.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...+|||||+++||+.+++.|+++| ++|++.+|+.++++++.+++.. ...++..+.+|++|+++++++++
T Consensus 8 GK~alITGas~GIG~aia~~la~~G-------a~V~~~~r~~~~l~~~~~~~~~-~g~~~~~~~~Dv~~~~~v~~~~~~~ 79 (259)
T d2ae2a_ 8 GCTALVTGGSRGIGYGIVEELASLG-------ASVYTCSRNQKELNDCLTQWRS-KGFKVEASVCDLSSRSERQELMNTV 79 (259)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHH-TTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHh-cCCCceEEEeeCCCHHHHHHHHHHH
Confidence 4579999999999999999999999 8999999999999998888742 23467788999999999887764
Q ss_pred ------CccEEeecCCCCC
Q 012947 88 ------QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (452)
+.|++|||||...
T Consensus 80 ~~~~~~~idilvnnAG~~~ 98 (259)
T d2ae2a_ 80 ANHFHGKLNILVNNAGIVI 98 (259)
T ss_dssp HHHTTTCCCEEEECCCCCC
T ss_pred HHHhCCCceEEEECCceec
Confidence 4799999999654
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.27 E-value=1.2e-12 Score=123.58 Aligned_cols=122 Identities=11% Similarity=0.121 Sum_probs=89.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
....++||||+++||+.+++.|+++| ++|++.+|++++++++.+++.. ...++..+.+|++|+++++++++
T Consensus 9 enKvalITGas~GIG~a~a~~la~~G-------a~V~~~~r~~~~l~~~~~~l~~-~g~~~~~~~~Dvt~~~~v~~~~~~ 80 (251)
T d2c07a1 9 ENKVALVTGAGRGIGREIAKMLAKSV-------SHVICISRTQKSCDSVVDEIKS-FGYESSGYAGDVSKKEEISEVINK 80 (251)
T ss_dssp SSCEEEEESTTSHHHHHHHHHHTTTS-------SEEEEEESSHHHHHHHHHHHHT-TTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcC-------CEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHH
Confidence 34679999999999999999999998 8999999999999999888853 23578899999999999998876
Q ss_pred ------CccEEeecCCCCCCC-----CHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEE
Q 012947 88 ------QTKLLLNCVGPYRLH-----GDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLL 145 (452)
Q Consensus 88 ------~~dvVIn~aGp~~~~-----~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~i 145 (452)
+.|++|||+|..... .....+...+ +++.+....++..++.+.+ ++.|.+|
T Consensus 81 ~~~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~-----vNl~~~~~~~~~~~~~m~~--~~~G~IV 142 (251)
T d2c07a1 81 ILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLR-----TNLNSLFYITQPISKRMIN--NRYGRII 142 (251)
T ss_dssp HHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHH-----HHTTHHHHHHHHHHHHHHH--HTCEEEE
T ss_pred HHHhcCCceeeeeccccccccccccccHHHHhhhhe-----eeehhhhhhhhhcCccccc--CCCeEEE
Confidence 679999999865432 1223333322 4555666666666544432 3345443
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=99.27 E-value=9.5e-13 Score=123.64 Aligned_cols=118 Identities=14% Similarity=0.093 Sum_probs=88.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+++||+.+++.|+++| ++|++.+|++++++++.++++ .+...+.+|++|+++++++++
T Consensus 4 gK~alITGas~GIG~a~a~~l~~~G-------~~Vv~~~r~~~~l~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~ 72 (243)
T d1q7ba_ 4 GKIALVTGASRGIGRAIAETLAARG-------AKVIGTATSENGAQAISDYLG----ANGKGLMLNVTDPASIESVLEKI 72 (243)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTT-------CEEEEEESSHHHHHHHHHHHG----GGEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHhC----CCCcEEEEEecCHHHhhhhhhhh
Confidence 3579999999999999999999999 899999999999999999884 467788999999999988876
Q ss_pred -----CccEEeecCCCCCCCC-----HHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEE
Q 012947 88 -----QTKLLLNCVGPYRLHG-----DPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLL 145 (452)
Q Consensus 88 -----~~dvVIn~aGp~~~~~-----~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~i 145 (452)
+.|++|||||...... ..-.+... -+++.+....++...+.+. .++.|.+|
T Consensus 73 ~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~-----~vNl~~~~~~~~~~~~~m~--~~~~G~II 133 (243)
T d1q7ba_ 73 RAEFGEVDILVNNAGITRDNLLMRMKDEEWNDII-----ETNLSSVFRLSKAVMRAMM--KKRHGRII 133 (243)
T ss_dssp HHHTCSCSEEEECCCCCCCCCGGGCCHHHHHHHH-----HHHTHHHHHHHHHHHHHHH--HHTCEEEE
T ss_pred hcccCCcceehhhhhhcccccccccccccccccc-----ceeechhhhhHHHHHHHHH--HcCCCEee
Confidence 5899999998654322 22222222 2455566666666655443 23345443
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=99.27 E-value=9.7e-13 Score=124.68 Aligned_cols=132 Identities=14% Similarity=0.100 Sum_probs=88.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC-hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~-~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++||||+++||+.+|+.|+++| ++|++.+|+ .++++++.+++......++..+.+|++|+++++++++
T Consensus 4 gK~alITGas~GIG~aiA~~la~~G-------a~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~ 76 (260)
T d1x1ta1 4 GKVAVVTGSTSGIGLGIATALAAQG-------ADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDN 76 (260)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTT-------CEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHH
T ss_pred cCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence 4579999999999999999999999 899999997 4666666555421113467888999999999998876
Q ss_pred ------CccEEeecCCCCCCC-----CHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEE--cCCCCCcc
Q 012947 88 ------QTKLLLNCVGPYRLH-----GDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLV--SACGFDSI 154 (452)
Q Consensus 88 ------~~dvVIn~aGp~~~~-----~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv--~~~G~~s~ 154 (452)
+.|+||||||..... ...-.+...+ +++.+....++..++.+. .++.|.+|. +..|+.+.
T Consensus 77 ~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~-----vNl~g~~~~~~~~~~~m~--~~~~G~Iv~isS~~~~~~~ 149 (260)
T d1x1ta1 77 AVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILA-----LNLSAVFHGTAAALPHMK--KQGFGRIINIASAHGLVAS 149 (260)
T ss_dssp HHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHH-----HHTHHHHHHHHHHHHHHH--HHTCEEEEEECCGGGTSCC
T ss_pred HHHHhCCCcEEEeecccccCCchhhhhHHhhhhhhh-----ccccccccccchhhhhHh--hcCCceEeecccccceecc
Confidence 579999999965432 2223333332 344555556666555443 233444433 33344444
Q ss_pred h
Q 012947 155 P 155 (452)
Q Consensus 155 P 155 (452)
|
T Consensus 150 ~ 150 (260)
T d1x1ta1 150 A 150 (260)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.26 E-value=1.8e-11 Score=116.59 Aligned_cols=139 Identities=17% Similarity=0.176 Sum_probs=95.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCC--CCCCccEEEEeCCCHHHHHHHHc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS--HSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~--~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
...++||||+++||+.+|+.|+++| ++|++.+|++++++++.+++... ...++..+.+|++|+++++++++
T Consensus 5 gK~alVTGas~GIG~aia~~la~~G-------a~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~ 77 (272)
T d1xkqa_ 5 NKTVIITGSSNGIGRTTAILFAQEG-------ANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIIN 77 (272)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHH
T ss_pred CCEEEEeCcCcHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHH
Confidence 3579999999999999999999999 89999999999999988887431 12356789999999999988876
Q ss_pred -------CccEEeecCCCCCCCC---------HHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcC--C
Q 012947 88 -------QTKLLLNCVGPYRLHG---------DPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSA--C 149 (452)
Q Consensus 88 -------~~dvVIn~aGp~~~~~---------~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~--~ 149 (452)
+.|++|||||...... ....+...+ +++.+....++...+.+. .+..+++++.+ .
T Consensus 78 ~~~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~-----vNl~~~~~~~~~~~p~m~--~~~g~iI~~~Ss~a 150 (272)
T d1xkqa_ 78 STLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLK-----LNLQAVIEMTKKVKPHLV--ASKGEIVNVSSIVA 150 (272)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHH-----HHTHHHHHHHHHHHHHHH--HHTCEEEEECCGGG
T ss_pred HHHHHhCCceEEEeCCcccCcccccccchhccHHHHHHHHH-----hhhhHHHHHHHhhccccc--ccCCccccccchhc
Confidence 5799999999653211 112222222 345565666666655443 23344444433 2
Q ss_pred CCCcchhhHHHHHH
Q 012947 150 GFDSIPAELGVMFN 163 (452)
Q Consensus 150 G~~s~P~dl~~~~~ 163 (452)
|..+.| ...+|.+
T Consensus 151 ~~~~~~-~~~~Y~a 163 (272)
T d1xkqa_ 151 GPQAQP-DFLYYAI 163 (272)
T ss_dssp SSSCCC-SSHHHHH
T ss_pred cccCCC-Ccchhhh
Confidence 444444 3344443
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=99.25 E-value=9e-12 Score=117.68 Aligned_cols=113 Identities=14% Similarity=0.031 Sum_probs=84.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
+...++||||+++||+.+|+.|+++| ++|++.+|+.++++++.+++.. ...++..+.+|++|+++++++++
T Consensus 10 ~gK~alITGas~GIG~aia~~la~~G-------a~V~~~~r~~~~~~~~~~~l~~-~g~~~~~~~~Dvs~~~~~~~~~~~ 81 (255)
T d1fmca_ 10 DGKCAIITGAGAGIGKEIAITFATAG-------ASVVVSDINADAANHVVDEIQQ-LGGQAFACRCDITSEQELSALADF 81 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTTT-------CEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHH-cCCcEEEEEccCCCHHHHHHHHHH
Confidence 34689999999999999999999999 8999999999999998888743 23577889999999999988775
Q ss_pred ------CccEEeecCCCCCCC----CHHHHHHHHHhCCcEEEecCcHHHHHHHHHHH
Q 012947 88 ------QTKLLLNCVGPYRLH----GDPVAAACVHSGCDYLDISGEPEFMERMEARY 134 (452)
Q Consensus 88 ------~~dvVIn~aGp~~~~----~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~ 134 (452)
+.|++|||||..... ...-++... -+++.+....++..++.+
T Consensus 82 ~~~~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~-----~vNl~~~~~~~~~~~~~m 133 (255)
T d1fmca_ 82 AISKLGKVDILVNNAGGGGPKPFDMPMADFRRAY-----ELNVFSFFHLSQLVAPEM 133 (255)
T ss_dssp HHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHH-----HHHTHHHHHHHHHHHHHH
T ss_pred HHHHcCCCCEeeeCCcCCCCCcccCCHHHHHHHH-----HHHHHHhhhhHHHHHhhh
Confidence 579999999964332 122222222 244555555555554443
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.24 E-value=2.2e-11 Score=114.65 Aligned_cols=108 Identities=13% Similarity=0.087 Sum_probs=84.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...+|||||+++||+.+++.|+++| ++|++.+|++++++++.+++. ++..+.+|++|+++++++++
T Consensus 6 GK~alITGas~GIG~aia~~la~~G-------a~V~i~~r~~~~~~~~~~~~~-----~~~~~~~Dvs~~~~v~~~~~~~ 73 (250)
T d1ydea1 6 GKVVVVTGGGRGIGAGIVRAFVNSG-------ARVVICDKDESGGRALEQELP-----GAVFILCDVTQEDDVKTLVSET 73 (250)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHCT-----TEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHhcC-----CCeEEEccCCCHHHHHHHHHHH
Confidence 3579999999999999999999999 899999999999999988763 57888999999999998876
Q ss_pred -----CccEEeecCCCCCCC------CHHHHHHHHHhCCcEEEecCcHHHHHHHHHHH
Q 012947 88 -----QTKLLLNCVGPYRLH------GDPVAAACVHSGCDYLDISGEPEFMERMEARY 134 (452)
Q Consensus 88 -----~~dvVIn~aGp~~~~------~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~ 134 (452)
+.|++|||||..... .....+...+ +++.+....++..++.+
T Consensus 74 ~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~-----vNl~g~~~~~~~~~p~m 126 (250)
T d1ydea1 74 IRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLE-----LNLLGTYTLTKLALPYL 126 (250)
T ss_dssp HHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHH-----HHTHHHHHHHHHHHHHH
T ss_pred HHhcCCCCEEEecccccccccccccccHHHHHHHHH-----HhhhhHHHHHHHhhHHH
Confidence 579999999964322 1223333333 45556666666665544
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.24 E-value=1.6e-11 Score=115.79 Aligned_cols=85 Identities=16% Similarity=0.105 Sum_probs=73.1
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHc--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~-~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..++||||+++||+.+++.|+++| ++|++++|+.++++++.+++... ...++..+.+|++|+++++++++
T Consensus 4 KvalITGas~GIG~aia~~la~~G-------a~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 76 (254)
T d2gdza1 4 KVALVTGAAQGIGRAFAEALLLKG-------AKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKV 76 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHH
Confidence 479999999999999999999999 89999999999999988887531 23467788999999999988876
Q ss_pred -----CccEEeecCCCCCCC
Q 012947 88 -----QTKLLLNCVGPYRLH 102 (452)
Q Consensus 88 -----~~dvVIn~aGp~~~~ 102 (452)
+.|++|||||.....
T Consensus 77 ~~~~G~iDilVnnAg~~~~~ 96 (254)
T d2gdza1 77 VDHFGRLDILVNNAGVNNEK 96 (254)
T ss_dssp HHHHSCCCEEEECCCCCCSS
T ss_pred HHHcCCcCeecccccccccc
Confidence 579999999976543
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=99.22 E-value=2.4e-11 Score=115.93 Aligned_cols=110 Identities=13% Similarity=0.114 Sum_probs=84.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+++||+.+++.|+++| ++|++.+|+.++++++.++++ .++..+.+|++|+++++++++
T Consensus 5 gK~alITGas~GIG~aia~~la~~G-------a~V~i~~r~~~~l~~~~~~~~----~~~~~~~~Dv~~~~~~~~~~~~~ 73 (276)
T d1bdba_ 5 GEAVLITGGASGLGRALVDRFVAEG-------AKVAVLDKSAERLAELETDHG----DNVLGIVGDVRSLEDQKQAASRC 73 (276)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHG----GGEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHcC----CCeeEEecccccHHHHHHHHHHH
Confidence 4579999999999999999999999 899999999999999988874 467889999999999988876
Q ss_pred -----CccEEeecCCCCCCCC----------HHHHHHHHHhCCcEEEecCcHHHHHHHHHHHH
Q 012947 88 -----QTKLLLNCVGPYRLHG----------DPVAAACVHSGCDYLDISGEPEFMERMEARYH 135 (452)
Q Consensus 88 -----~~dvVIn~aGp~~~~~----------~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~ 135 (452)
+.|++|||||...... +...+...+ +++.+....++..++.+.
T Consensus 74 ~~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~-----vNl~g~~~~~~~~~p~m~ 131 (276)
T d1bdba_ 74 VARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFH-----INVKGYIHAVKACLPALV 131 (276)
T ss_dssp HHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHH-----HHTHHHHHHHHHHHHHHH
T ss_pred HHHhCCcccccccccccCCCCccccccccchhhhhhHHHH-----HhhHHHHHHHHHHHHHHH
Confidence 5799999999643211 111222222 455566666666655543
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=99.22 E-value=7.3e-12 Score=117.71 Aligned_cols=110 Identities=13% Similarity=0.133 Sum_probs=81.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhH-HHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR-VKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~k-l~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++||||+++||+.+++.|+++| ++|++.+|+.++ .++..++. ..++..+.+|++|+++++++++
T Consensus 5 gKvalVTGas~GIG~aia~~la~~G-------a~V~~~~~~~~~~~~~~~~~~----g~~~~~~~~Dvs~~~~v~~~~~~ 73 (247)
T d2ew8a1 5 DKLAVITGGANGIGRAIAERFAVEG-------ADIAIADLVPAPEAEAAIRNL----GRRVLTVKCDVSQPGDVEAFGKQ 73 (247)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESSCCHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCchHHHHHHHHHc----CCcEEEEEeeCCCHHHHHHHHHH
Confidence 3579999999999999999999999 899999997643 44455554 3578899999999999988876
Q ss_pred ------CccEEeecCCCCCCC-----CHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHH
Q 012947 88 ------QTKLLLNCVGPYRLH-----GDPVAAACVHSGCDYLDISGEPEFMERMEARYH 135 (452)
Q Consensus 88 ------~~dvVIn~aGp~~~~-----~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~ 135 (452)
+.|++|||||..... ....++...+ +++.+....++..++.+.
T Consensus 74 ~~~~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~-----vNl~~~~~~~~~~~~~m~ 127 (247)
T d2ew8a1 74 VISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFE-----INVDSGFLMAKAFVPGMK 127 (247)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH-----HHTHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCCEEEECCCCCCCCChHhCCHHHhhhhhe-----eehhhhhHHHHHHHhHHH
Confidence 689999999975432 2233333333 455566666666655443
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.22 E-value=1.4e-11 Score=118.98 Aligned_cols=133 Identities=17% Similarity=0.214 Sum_probs=92.1
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC----CCCCCccEEEEeCCCHHHHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP----SHSLSIPILTADTTDPPSLHR 84 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~----~~~~~v~~v~~Dl~d~~sl~~ 84 (452)
+...+|||||+++||+.+++.|+++| ++|++.+|+.++++++.+++.. ....++..+.+|++|++++++
T Consensus 11 ~gKvalITGas~GIG~aia~~la~~G-------a~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~ 83 (297)
T d1yxma1 11 QGQVAIVTGGATGIGKAIVKELLELG-------SNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNN 83 (297)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHH
Confidence 45689999999999999999999999 8999999999999888777632 123467888999999999988
Q ss_pred HHc-------CccEEeecCCCCCCC-----CHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEE-EcCCCC
Q 012947 85 LCS-------QTKLLLNCVGPYRLH-----GDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLL-VSACGF 151 (452)
Q Consensus 85 ~~~-------~~dvVIn~aGp~~~~-----~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~i-v~~~G~ 151 (452)
+++ +.|++|||||..... .....+...+ +++.+....++...+.+. .++.+.+| +++.+.
T Consensus 84 ~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~-----vNl~g~~~~~~~~~~~m~--~~~~g~Ii~~ss~~~ 156 (297)
T d1yxma1 84 LVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLE-----TNLTGTFYMCKAVYSSWM--KEHGGSIVNIIVPTK 156 (297)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH-----HHTHHHHHHHHHHHHHTH--HHHCEEEEEECCCCT
T ss_pred HHHHHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhc-----ccccchhhHHHHHHHhhc--ccccccccccccccc
Confidence 876 579999999854332 2333333333 344455555555544332 33444443 344444
Q ss_pred Ccch
Q 012947 152 DSIP 155 (452)
Q Consensus 152 ~s~P 155 (452)
...|
T Consensus 157 ~~~~ 160 (297)
T d1yxma1 157 AGFP 160 (297)
T ss_dssp TCCT
T ss_pred cccc
Confidence 3444
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.22 E-value=2.8e-12 Score=121.48 Aligned_cols=83 Identities=18% Similarity=0.244 Sum_probs=70.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+++||+.+++.|+++| ++|++.+|++++++++.+++.. ...++..+.+|++|+++++++++
T Consensus 8 gK~alVTGas~GIG~aiA~~la~~G-------a~V~~~~r~~~~l~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~ 79 (259)
T d1xq1a_ 8 AKTVLVTGGTKGIGHAIVEEFAGFG-------AVIHTCARNEYELNECLSKWQK-KGFQVTGSVCDASLRPEREKLMQTV 79 (259)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHh-cCCceEEEeccCCCHHHHHHHHHHH
Confidence 4689999999999999999999999 8999999999999998887743 23578889999999999887764
Q ss_pred ------CccEEeecCCCCC
Q 012947 88 ------QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (452)
..|++|||||...
T Consensus 80 ~~~~~g~idilvnnAG~~~ 98 (259)
T d1xq1a_ 80 SSMFGGKLDILINNLGAIR 98 (259)
T ss_dssp HHHHTTCCSEEEEECCC--
T ss_pred HHHhCCCcccccccccccC
Confidence 4799999999643
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=99.22 E-value=4.5e-12 Score=120.20 Aligned_cols=112 Identities=13% Similarity=0.020 Sum_probs=81.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh-hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~-~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++||||+++||+.+++.|+++| ++|++.+|+. ++++++.+++.. ...++..+.+|++|+++++++++
T Consensus 7 gK~alITGas~GIG~aia~~la~~G-------~~Vv~~~r~~~~~~~~~~~~~~~-~g~~~~~~~~Dvt~~~~v~~~~~~ 78 (261)
T d1geea_ 7 GKVVVITGSSTGLGKSMAIRFATEK-------AKVVVNYRSKEDEANSVLEEIKK-VGGEAIAVKGDVTVESDVINLVQS 78 (261)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTT-------CEEEEEESSCHHHHHHHHHHHHH-TTCEEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCcHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHH
Confidence 4579999999999999999999999 8999999985 466666666632 23467888999999999988876
Q ss_pred ------CccEEeecCCCCCCCC-----HHHHHHHHHhCCcEEEecCcHHHHHHHHHHH
Q 012947 88 ------QTKLLLNCVGPYRLHG-----DPVAAACVHSGCDYLDISGEPEFMERMEARY 134 (452)
Q Consensus 88 ------~~dvVIn~aGp~~~~~-----~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~ 134 (452)
+.|++|||||...... ..-.+...+ +++.+....++..++.+
T Consensus 79 ~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~-----vNl~g~~~~~~~~~~~m 131 (261)
T d1geea_ 79 AIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVID-----TNLTGAFLGSREAIKYF 131 (261)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH-----HHTHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCEeeccceecCCcchhhcCHHHHHHHHH-----HhcccchhHHHHHhhhh
Confidence 5799999999654321 222232222 34555556666665544
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.21 E-value=5.2e-12 Score=120.53 Aligned_cols=123 Identities=19% Similarity=0.195 Sum_probs=88.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCC--CCCCccEEEEeCCCHHHHHHHHc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS--HSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~--~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
...++||||+++||+.+++.|+++| ++|++.+|+.++++++.+++... ...++..+.+|++|+++++++++
T Consensus 4 gK~alITGas~GIG~aia~~la~~G-------a~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 76 (274)
T d1xhla_ 4 GKSVIITGSSNGIGRSAAVIFAKEG-------AQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIIN 76 (274)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHH
Confidence 3579999999999999999999999 89999999999999888877421 12356789999999999988876
Q ss_pred -------CccEEeecCCCCCCCC-------HHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEE
Q 012947 88 -------QTKLLLNCVGPYRLHG-------DPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLV 146 (452)
Q Consensus 88 -------~~dvVIn~aGp~~~~~-------~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv 146 (452)
+.|++|||||.....+ ....+...+ +++.+....++...+.+. .++.|.+++
T Consensus 77 ~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~-----vNl~~~~~~~~~~~~~m~--~~~~g~ii~ 142 (274)
T d1xhla_ 77 TTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFK-----LNFQAVIEMTQKTKEHLI--KTKGEIVNV 142 (274)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHH-----HHTHHHHHHHHHHHHHHH--HTTCEEEEE
T ss_pred HHHHHcCCceEEEeecccccccccccccCCHHHHHHHHh-----hccccccccccccccccc--ccccccccc
Confidence 5799999999643321 222333332 455565556666554442 233444444
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=99.21 E-value=6.2e-12 Score=119.00 Aligned_cols=85 Identities=18% Similarity=0.162 Sum_probs=72.3
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
+...+|||||++.||+.+++.|+++| ++|++.+|++++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~G-------~~V~i~~r~~~~l~~~~~~~~~-~~~~~~~~~~D~s~~~~~~~~~~~ 76 (258)
T d1ae1a_ 5 KGTTALVTGGSKGIGYAIVEELAGLG-------ARVYTCSRNEKELDECLEIWRE-KGLNVEGSVCDLLSRTERDKLMQT 76 (258)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHh-cCCCceEEEeecCCHHHHHHHHHH
Confidence 34689999999999999999999999 8999999999999988887743 23567788999999999887764
Q ss_pred -------CccEEeecCCCCCC
Q 012947 88 -------QTKLLLNCVGPYRL 101 (452)
Q Consensus 88 -------~~dvVIn~aGp~~~ 101 (452)
..|+||||||....
T Consensus 77 ~~~~~~g~idilinnag~~~~ 97 (258)
T d1ae1a_ 77 VAHVFDGKLNILVNNAGVVIH 97 (258)
T ss_dssp HHHHTTSCCCEEEECCCCCCC
T ss_pred HHHHhCCCcEEEecccccccc
Confidence 37999999996543
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.20 E-value=1.2e-11 Score=117.32 Aligned_cols=130 Identities=15% Similarity=0.153 Sum_probs=86.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCC--CCCCccEEEEeCCCHHHHHHHHc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS--HSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~--~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
...+|||||+++||+.+++.|+++| ++|++.+|+.++++++.+++... ...++..+.+|++|+++++++++
T Consensus 5 gKvalVTGas~GIG~aia~~la~~G-------a~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~ 77 (264)
T d1spxa_ 5 EKVAIITGSSNGIGRATAVLFAREG-------AKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILS 77 (264)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHH
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHH
Confidence 4579999999999999999999999 89999999999999988877321 12357889999999999998876
Q ss_pred -------CccEEeecCCCCCCCC--HHHHHHHHHh--CCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcC
Q 012947 88 -------QTKLLLNCVGPYRLHG--DPVAAACVHS--GCDYLDISGEPEFMERMEARYHEKAVETGSLLVSA 148 (452)
Q Consensus 88 -------~~dvVIn~aGp~~~~~--~~vv~ac~~~--g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~ 148 (452)
+.|++|||||...... ....+.-.+. .+.-+++.+....++..++.+. .+..+++++.+
T Consensus 78 ~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~--~~~g~iI~~~S 147 (264)
T d1spxa_ 78 TTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLS--STKGEIVNISS 147 (264)
T ss_dssp HHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHH--HHTCEEEEECC
T ss_pred HHHHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccc--cccCcceeeee
Confidence 5799999999643211 1111111111 1122455566666666654442 23344444433
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=99.19 E-value=5.1e-12 Score=121.44 Aligned_cols=86 Identities=16% Similarity=0.135 Sum_probs=72.1
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
+...+||||||++||+++|+.|+++| ++|++++|+.++++++.+++......++..+.+|++|+++++++++
T Consensus 24 ~gK~alITGas~GIG~aiA~~la~~G-------a~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~ 96 (294)
T d1w6ua_ 24 QGKVAFITGGGTGLGKGMTTLLSSLG-------AQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSE 96 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcC-------CEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhh
Confidence 34679999999999999999999999 8999999999998887776632123567788999999999987765
Q ss_pred ------CccEEeecCCCCCC
Q 012947 88 ------QTKLLLNCVGPYRL 101 (452)
Q Consensus 88 ------~~dvVIn~aGp~~~ 101 (452)
+.|++|||+|....
T Consensus 97 ~~~~~g~iDilvnnAg~~~~ 116 (294)
T d1w6ua_ 97 LIKVAGHPNIVINNAAGNFI 116 (294)
T ss_dssp HHHHTCSCSEEEECCCCCCC
T ss_pred hhhhccccchhhhhhhhccc
Confidence 57999999996543
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.18 E-value=7.1e-12 Score=118.24 Aligned_cols=109 Identities=12% Similarity=-0.033 Sum_probs=84.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+++||+.+++.|+++| ++|++.+|++++++++.++++ .+...+.+|++|+++++++++
T Consensus 6 gK~alITGas~GIG~aia~~la~~G-------a~V~~~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~~~~~~~~~ 74 (253)
T d1hxha_ 6 GKVALVTGGASGVGLEVVKLLLGEG-------AKVAFSDINEAAGQQLAAELG----ERSMFVRHDVSSEADWTLVMAAV 74 (253)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTT-------CEEEEECSCHHHHHHHHHHHC----TTEEEECCCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHhC----CCeEEEEeecCCHHHHHHHHHHH
Confidence 4679999999999999999999999 899999999999999999884 467788999999999988876
Q ss_pred -----CccEEeecCCCCCCC-----CHHHHHHHHHhCCcEEEecCcHHHHHHHHHHH
Q 012947 88 -----QTKLLLNCVGPYRLH-----GDPVAAACVHSGCDYLDISGEPEFMERMEARY 134 (452)
Q Consensus 88 -----~~dvVIn~aGp~~~~-----~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~ 134 (452)
+.|++|||||..... ....++...+ +++.+....++..++.+
T Consensus 75 ~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~-----vNl~~~~~~~~~~~~~m 126 (253)
T d1hxha_ 75 QRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLK-----INTESVFIGCQQGIAAM 126 (253)
T ss_dssp HHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHH-----HHTHHHHHHHHHHHHHH
T ss_pred HHHhCCCCeEEecccccCCCCcccCCHHHHHHHHH-----HhhhHHHHHHHHHHHHH
Confidence 579999999965432 2233333333 34555555556655444
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.18 E-value=2.8e-12 Score=120.42 Aligned_cols=111 Identities=13% Similarity=0.085 Sum_probs=81.9
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEE-ecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~ia-gR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
-+|||||+++||+.+++.|+++| ++|++. .|+.++++++.+++.. ...++..+.+|++|+++++++++
T Consensus 3 V~lITGas~GIG~a~a~~la~~G-------a~V~i~~~~~~~~~~~~~~~~~~-~g~~~~~~~~Dv~~~~~v~~~~~~~~ 74 (244)
T d1edoa_ 3 VVVVTGASRGIGKAIALSLGKAG-------CKVLVNYARSAKAAEEVSKQIEA-YGGQAITFGGDVSKEADVEAMMKTAI 74 (244)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTT-------CEEEEEESSCHHHHHHHHHHHHH-HTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCCHHHHHHHHHHHHH-cCCcEEEEeCCCCCHHHHHHHHHHHH
Confidence 48999999999999999999999 899886 5677888777766632 23467889999999999988876
Q ss_pred ----CccEEeecCCCCCCC-----CHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHH
Q 012947 88 ----QTKLLLNCVGPYRLH-----GDPVAAACVHSGCDYLDISGEPEFMERMEARYH 135 (452)
Q Consensus 88 ----~~dvVIn~aGp~~~~-----~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~ 135 (452)
+.|++|||||..... .....+...+ +++.+....++..++.+.
T Consensus 75 ~~~g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~-----vNl~~~~~~~~~~~~~m~ 126 (244)
T d1edoa_ 75 DAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVID-----LNLTGVFLCTQAATKIMM 126 (244)
T ss_dssp HHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHH-----HHTHHHHHHHHHHHHHHH
T ss_pred HHcCCCCccccccccccccchhccchHHHHHHHh-----hhhhhHHHHHHHHHHHHH
Confidence 579999999965432 2223333322 455566666666655543
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=99.16 E-value=4.9e-11 Score=112.06 Aligned_cols=106 Identities=11% Similarity=0.081 Sum_probs=79.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...+|||||+++||+.+++.|+++| ++|++.+|+++++ ++.+++ +...+.+|++|+++++++++
T Consensus 5 GK~alITGas~GIG~aia~~la~~G-------~~V~~~~~~~~~~-~~~~~~------~~~~~~~Dv~~~~~v~~~~~~~ 70 (248)
T d2d1ya1 5 GKGVLVTGGARGIGRAIAQAFAREG-------ALVALCDLRPEGK-EVAEAI------GGAFFQVDLEDERERVRFVEEA 70 (248)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESSTTHH-HHHHHH------TCEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHH-HHHHHc------CCeEEEEeCCCHHHHHHHHHHH
Confidence 3579999999999999999999999 8999999998875 455555 34678999999999988876
Q ss_pred -----CccEEeecCCCCCC-----CCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHH
Q 012947 88 -----QTKLLLNCVGPYRL-----HGDPVAAACVHSGCDYLDISGEPEFMERMEARY 134 (452)
Q Consensus 88 -----~~dvVIn~aGp~~~-----~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~ 134 (452)
+.|++|||||.... ......+...+ +++.+....++..++.+
T Consensus 71 ~~~~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~-----vNl~g~~~~~~~~~p~m 122 (248)
T d2d1ya1 71 AYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLE-----VNLTAPMHLSALAAREM 122 (248)
T ss_dssp HHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHH-----HHTHHHHHHHHHHHHHH
T ss_pred HHhcCCCCeEEEeCcCCCCCChhhCCHHHHHHHHH-----hhhhhHhhhhhhhcccc
Confidence 57999999996432 22333444333 35556666666665444
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=99.16 E-value=8e-12 Score=118.24 Aligned_cols=84 Identities=11% Similarity=0.071 Sum_probs=70.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...+|||||+++||+.+++.|+++| ++|++.+|+.++++++.+++......++..+.+|++|+++++++++
T Consensus 9 gK~alITGas~GIG~aia~~la~~G-------a~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~ 81 (260)
T d1h5qa_ 9 NKTIIVTGGNRGIGLAFTRAVAAAG-------ANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQI 81 (260)
T ss_dssp TEEEEEETTTSHHHHHHHHHHHHTT-------EEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHH
Confidence 4679999999999999999999999 8999999999988777665521113567889999999999988876
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
+.|++|||||...
T Consensus 82 ~~~~g~iDilVnnAg~~~ 99 (260)
T d1h5qa_ 82 DADLGPISGLIANAGVSV 99 (260)
T ss_dssp HHHSCSEEEEEECCCCCC
T ss_pred HHHhCCCcEecccccccc
Confidence 5799999998643
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=99.14 E-value=5e-11 Score=111.45 Aligned_cols=79 Identities=15% Similarity=0.144 Sum_probs=70.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...+||+||+++||+.+|+.|+++| ++|++.+|+.++++++.++++ .++..+++|++|+++++++++
T Consensus 5 gK~alItGas~GIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dls~~~~i~~~~~~i 73 (241)
T d2a4ka1 5 GKTILVTGAASGIGRAALDLFAREG-------ASLVAVDREERLLAEAVAALE----AEAIAVVADVSDPKAVEAVFAEA 73 (241)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHTCC----SSEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHcC----CceEEEEecCCCHHHHHHHHHHH
Confidence 3579999999999999999999999 899999999999999988774 577889999999999988776
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
+.|++|||||..
T Consensus 74 ~~~~g~iDiLinnAg~~ 90 (241)
T d2a4ka1 74 LEEFGRLHGVAHFAGVA 90 (241)
T ss_dssp HHHHSCCCEEEEGGGGT
T ss_pred HHHhCCccEeccccccc
Confidence 579999999854
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=99.14 E-value=3.8e-11 Score=108.26 Aligned_cols=81 Identities=14% Similarity=0.149 Sum_probs=72.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
+..+++||||+|++|+.+++.|+++| .+|++++|+.++++++.+++.. ..++.+..+|++|.+++++++.+
T Consensus 22 ~gK~vlItGasgGIG~~ia~~la~~G-------~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~ 92 (191)
T d1luaa1 22 KGKKAVVLAGTGPVGMRSAALLAGEG-------AEVVLCGRKLDKAQAAADSVNK--RFKVNVTAAETADDASRAEAVKG 92 (191)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESSHHHHHHHHHHHHH--HHTCCCEEEECCSHHHHHHHTTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhhc-------cchhhcccchHHHHHHHHHHHh--ccchhhhhhhcccHHHHHHHhcC
Confidence 45789999999999999999999999 8999999999999988887742 24567889999999999999999
Q ss_pred ccEEeecCCC
Q 012947 89 TKLLLNCVGP 98 (452)
Q Consensus 89 ~dvVIn~aGp 98 (452)
+|+||||+|.
T Consensus 93 iDilin~Ag~ 102 (191)
T d1luaa1 93 AHFVFTAGAI 102 (191)
T ss_dssp CSEEEECCCT
T ss_pred cCeeeecCcc
Confidence 9999999985
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.10 E-value=1.3e-10 Score=113.25 Aligned_cols=77 Identities=10% Similarity=0.185 Sum_probs=62.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC----hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN----PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~----~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
|+|||||||||+|++++++|++.+ ++|.+++|. ...+... +.+. ..++.++.+|++|.+.+.+++
T Consensus 1 MKiLItG~tGfIG~~l~~~L~~~g-------~~V~~~d~~~~~~~~~~~~~-~~~~---~~~~~~~~~Dl~d~~~l~~~~ 69 (338)
T d1udca_ 1 MRVLVTGGSGYIGSHTCVQLLQNG-------HDVIILDNLCNSKRSVLPVI-ERLG---GKHPTFVEGDIRNEALMTEIL 69 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECCSSCCTTHHHHH-HHHH---TSCCEEEECCTTCHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCc-------CEEEEEECCCCcchhhHHHH-Hhhc---CCCCEEEEeecCCHHHHHHHH
Confidence 689999999999999999999998 789988762 2222222 2221 357899999999999999999
Q ss_pred c--CccEEeecCCC
Q 012947 87 S--QTKLLLNCVGP 98 (452)
Q Consensus 87 ~--~~dvVIn~aGp 98 (452)
+ ++|+|||+|+.
T Consensus 70 ~~~~~d~ViHlAa~ 83 (338)
T d1udca_ 70 HDHAIDTVIHFAGL 83 (338)
T ss_dssp HHTTCSEEEECCSC
T ss_pred hccCCCEEEECCCc
Confidence 8 78999999974
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.09 E-value=8.1e-10 Score=96.81 Aligned_cols=131 Identities=17% Similarity=0.253 Sum_probs=107.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
.+|+|+|| |++|+.++++|++++ ++|++++|+.++++++.+.+ ........+..+...+...+...|
T Consensus 3 K~IliiGa-G~~G~~~a~~L~~~g-------~~V~v~dr~~~~a~~l~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~ 69 (182)
T d1e5qa1 3 KSVLMLGS-GFVTRPTLDVLTDSG-------IKVTVACRTLESAKKLSAGV-----QHSTPISLDVNDDAALDAEVAKHD 69 (182)
T ss_dssp CEEEEECC-STTHHHHHHHHHTTT-------CEEEEEESCHHHHHHHHTTC-----TTEEEEECCTTCHHHHHHHHTTSS
T ss_pred CEEEEECC-CHHHHHHHHHHHhCC-------CEEEEEECChHHHHHHHhcc-----cccccccccccchhhhHhhhhccc
Confidence 47999998 999999999999998 89999999999999988765 244555667788888899999999
Q ss_pred EEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHH
Q 012947 91 LLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGV 160 (452)
Q Consensus 91 vVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~ 160 (452)
+++.+. |+.. ...++..|.+.+++++|++.....+. .+++.++..+..++..|+....+..++.
T Consensus 70 ~~i~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (182)
T d1e5qa1 70 LVISLI-PYTF-HATVIKSAIRQKKHVVTTSYVSPAMM----ELDQAAKDAGITVMNEIGYSAMAKLVGV 133 (182)
T ss_dssp EEEECS-CGGG-HHHHHHHHHHHTCEEECSSCCCHHHH----HTHHHHHHTTCEEECSCBCCHHHHHHHH
T ss_pred eeEeec-cchh-hhHHHHHHHhhccceeecccCcHHHH----HHHHHhccccceeehhhhcchhhhhhcc
Confidence 999876 4433 36788999999999999987765543 4577888899999999999887766554
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.07 E-value=4.6e-11 Score=113.39 Aligned_cols=142 Identities=12% Similarity=0.057 Sum_probs=93.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
+...++|||||++||+++|+.|+++| ++|++++|+.++++++.+++.......+..+.+|+++.+.+...++
T Consensus 13 ~GK~alITGassGIG~aiA~~la~~G-------~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 85 (269)
T d1xu9a_ 13 QGKKVIVTGASKGIGREMAYHLAKMG-------AHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQ 85 (269)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHH
Confidence 34679999999999999999999999 8999999999999988776532123456788889999887776554
Q ss_pred ------CccEEeecCCCCCCC-----CHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccE--EEcCCCCCcc
Q 012947 88 ------QTKLLLNCVGPYRLH-----GDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSL--LVSACGFDSI 154 (452)
Q Consensus 88 ------~~dvVIn~aGp~~~~-----~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~--iv~~~G~~s~ 154 (452)
..|+++|++|..... ....++... .+++.+....++.+++.+. +..|.+ |.+..|..+.
T Consensus 86 ~~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~-----~vN~~~~~~~~~~~lp~m~---~~~G~ii~isS~~~~~~~ 157 (269)
T d1xu9a_ 86 AGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSM-----EVNFLSYVVLTVAALPMLK---QSNGSIVVVSSLAGKVAY 157 (269)
T ss_dssp HHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHH-----HHHTHHHHHHHHHHHHHHH---HHTCEEEEEEEGGGTSCC
T ss_pred HHHHhCCccccccccccccccccccCCHHHhhhhe-----eeehhhHHHHHHHHHHHHH---hcCCcceEeccchhcCCC
Confidence 579999999865432 122222222 2344455556666655442 233433 3355555555
Q ss_pred hhhHHHHHHhhh
Q 012947 155 PAELGVMFNSRQ 166 (452)
Q Consensus 155 P~dl~~~~~~~~ 166 (452)
| ...+|.++|.
T Consensus 158 p-~~~~Y~asKa 168 (269)
T d1xu9a_ 158 P-MVAAYSASKF 168 (269)
T ss_dssp T-TCHHHHHHHH
T ss_pred C-CchHHHHHHH
Confidence 5 3444444433
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.06 E-value=2.5e-11 Score=114.66 Aligned_cols=84 Identities=13% Similarity=0.074 Sum_probs=69.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEE-ecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~ia-gR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
-..+|||||+++||+++++.|+++| ++|++. .|+.++++++.+++.. ...++..+.+|++|+++++++++
T Consensus 6 GK~alITGas~GIG~aia~~la~~G-------~~Vvi~~~~~~~~~~~~~~~~~~-~g~~~~~~~~D~~~~~~v~~~~~~ 77 (259)
T d1ja9a_ 6 GKVALTTGAGRGIGRGIAIELGRRG-------ASVVVNYGSSSKAAEEVVAELKK-LGAQGVAIQADISKPSEVVALFDK 77 (259)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTT-------CEEEEEESSCHHHHHHHHHHHHH-TTCCEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcC-------CEEEEEcCCChHHHHHHHHHHHH-cCCCceEecCCCCCHHHHHHHHHH
Confidence 3579999999999999999999999 899886 5666667777666642 23577889999999999998877
Q ss_pred ------CccEEeecCCCCCC
Q 012947 88 ------QTKLLLNCVGPYRL 101 (452)
Q Consensus 88 ------~~dvVIn~aGp~~~ 101 (452)
..|++|||||....
T Consensus 78 ~~~~~g~idilinnag~~~~ 97 (259)
T d1ja9a_ 78 AVSHFGGLDFVMSNSGMEVW 97 (259)
T ss_dssp HHHHHSCEEEEECCCCCCCC
T ss_pred HHHHcCCCcEEEeccccccc
Confidence 57999999997543
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.05 E-value=2.4e-10 Score=106.96 Aligned_cols=117 Identities=18% Similarity=0.152 Sum_probs=82.5
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc----
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~---- 87 (452)
+||||||+++||+.+|+.|++... ..++|++++|++++++++.+... ...++.++.+|++|+++++++++
T Consensus 4 tilITGas~GIG~a~a~~l~~~a~----~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dvs~~~~v~~~~~~i~~ 77 (248)
T d1snya_ 4 SILITGCNRGLGLGLVKALLNLPQ----PPQHLFTTCRNREQAKELEDLAK--NHSNIHILEIDLRNFDAYDKLVADIEG 77 (248)
T ss_dssp EEEESCCSSHHHHHHHHHHHTSSS----CCSEEEEEESCTTSCHHHHHHHH--HCTTEEEEECCTTCGGGHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHHHh----CCCEEEEEECCHHHHHHHHHHHh--cCCcEEEEEEEeccHHHHHHHHhhhHH
Confidence 699999999999999999986321 11899999999998877654332 23578899999999998887655
Q ss_pred -----CccEEeecCCCCCCCC------HHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHH
Q 012947 88 -----QTKLLLNCVGPYRLHG------DPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAV 139 (452)
Q Consensus 88 -----~~dvVIn~aGp~~~~~------~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~ 139 (452)
+.|++|||||...... ..-.+... -+++.|....++.+.+.+.+..+
T Consensus 78 ~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~-----~vN~~g~~~~~~~~~p~l~~~~~ 135 (248)
T d1snya_ 78 VTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTL-----QTNTVVPIMLAKACLPLLKKAAK 135 (248)
T ss_dssp HHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHH-----HHHTHHHHHHHHHHHHHHHHHHH
T ss_pred HhhcCCcceEEeeccccccCcccccCCHHHHHHHH-----HhccccHHHHHHHHHHHHHHhhh
Confidence 4799999999644321 11122222 24555666667777666655543
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=99.05 E-value=1.6e-10 Score=108.74 Aligned_cols=113 Identities=16% Similarity=0.124 Sum_probs=79.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCC-CHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTT-DPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~-d~~sl~~~~~- 87 (452)
...++||||+++||+.+|+.|+++| .++++.+|+.++++++.+........++.++.+|++ +.++++++++
T Consensus 5 gK~vlITGgs~GIG~~~A~~la~~G-------~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 77 (254)
T d1sbya1 5 NKNVIFVAALGGIGLDTSRELVKRN-------LKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKK 77 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTC-------CSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHH
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCC-------CEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHH
Confidence 4579999999999999999999999 788888887766554432111112346788899997 6666776654
Q ss_pred ------CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHH
Q 012947 88 ------QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEK 137 (452)
Q Consensus 88 ------~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~ 137 (452)
++|+||||||...... .+.+.+ +++.|....++.+++.+.+.
T Consensus 78 ~~~~~g~iDilvnnAG~~~~~~---~~~~~~-----vNl~g~~~~~~~~~~~m~~~ 125 (254)
T d1sbya1 78 IFDQLKTVDILINGAGILDDHQ---IERTIA-----INFTGLVNTTTAILDFWDKR 125 (254)
T ss_dssp HHHHHSCCCEEEECCCCCCTTC---HHHHHH-----HHTHHHHHHHHHHHHHHCGG
T ss_pred HHHHcCCCCEEEeCCCCCCHHH---HHHHHH-----HHhHHHHHHHHHHHHHhhhc
Confidence 6899999999765433 333333 45666666677766655443
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.05 E-value=2e-10 Score=107.64 Aligned_cols=116 Identities=19% Similarity=0.204 Sum_probs=86.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..||||||+++||+.++++|+++|. .++|++.+|+.++++++.+.. ..++.++.+|++|.++++++++
T Consensus 4 KtilITGassGIG~a~a~~la~~G~-----~~~Vi~~~R~~~~~~~l~~~~----~~~~~~~~~Dvs~~~~v~~~~~~i~ 74 (250)
T d1yo6a1 4 GSVVVTGANRGIGLGLVQQLVKDKN-----IRHIIATARDVEKATELKSIK----DSRVHVLPLTVTCDKSLDTFVSKVG 74 (250)
T ss_dssp SEEEESSCSSHHHHHHHHHHHTCTT-----CCEEEEEESSGGGCHHHHTCC----CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC-----CCEEEEEeCCHHHHHHHHHhh----CCceEEEEEecCCHHHHHHHHHHHH
Confidence 6899999999999999999999982 157889999999998876543 3578899999999999887764
Q ss_pred ------CccEEeecCCCCCCCC------HHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHh
Q 012947 88 ------QTKLLLNCVGPYRLHG------DPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVE 140 (452)
Q Consensus 88 ------~~dvVIn~aGp~~~~~------~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~ 140 (452)
..|+||||||.....+ ....+...+ +++.|....++.+++.+.+....
T Consensus 75 ~~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~-----vN~~g~~~l~~~~~p~l~~~~~~ 134 (250)
T d1yo6a1 75 EIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLD-----VNTTSVVLLTQKLLPLLKNAASK 134 (250)
T ss_dssp HHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHH-----HHTHHHHHHHHHTHHHHHHHHHS
T ss_pred HHhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHH-----HHhhhHHHHHHHHHHHHHHhccC
Confidence 3799999999653321 222333332 45556666777776666655443
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.04 E-value=3.6e-11 Score=112.20 Aligned_cols=72 Identities=15% Similarity=0.146 Sum_probs=62.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||+++||+.+++.|+++| ++|++.+|+.+++ .++..+.+|++|+++++++++
T Consensus 7 gK~~lITGas~GIG~aia~~la~~G-------a~V~~~~r~~~~~------------~~~~~~~~Dv~~~~~v~~~~~~~ 67 (237)
T d1uzma1 7 SRSVLVTGGNRGIGLAIAQRLAADG-------HKVAVTHRGSGAP------------KGLFGVEVDVTDSDAVDRAFTAV 67 (237)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTT-------CEEEEEESSSCCC------------TTSEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCcchh------------cCceEEEEecCCHHHHHHHHHHH
Confidence 4589999999999999999999999 8999999987653 356778999999999988876
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
+.|++|||||...
T Consensus 68 ~~~~g~iDiLVnnAG~~~ 85 (237)
T d1uzma1 68 EEHQGPVEVLVSNAGLSA 85 (237)
T ss_dssp HHHHSSCSEEEEECSCCC
T ss_pred HHhcCCceEEEeeecccc
Confidence 5799999999643
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.01 E-value=1.9e-10 Score=108.27 Aligned_cols=85 Identities=21% Similarity=0.278 Sum_probs=68.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~-~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..+|||||+++||+.++++|++... ..++|++.+|+.++++++.+++.. ....++..+.+|++|+++++++++
T Consensus 7 KvalITGas~GIG~aiA~~lA~~~~----~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~ 82 (259)
T d1oaaa_ 7 AVCVLTGASRGFGRALAPQLARLLS----PGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV 82 (259)
T ss_dssp EEEEESSCSSHHHHHHHHHHHTTBC----TTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHhccc----CCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence 4689999999999999999997321 018999999999999998887742 123467889999999999988864
Q ss_pred ---------CccEEeecCCCC
Q 012947 88 ---------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ---------~~dvVIn~aGp~ 99 (452)
..|++|||+|..
T Consensus 83 ~~~~~~~~~~~~~lvnnag~~ 103 (259)
T d1oaaa_ 83 RELPRPEGLQRLLLINNAATL 103 (259)
T ss_dssp HHSCCCTTCCEEEEEECCCCC
T ss_pred HHhhhhccCceEEEEeccccc
Confidence 357999999864
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=98.99 E-value=4.5e-10 Score=110.33 Aligned_cols=81 Identities=19% Similarity=0.171 Sum_probs=58.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh-----hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-----TRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~-----~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
..+||||||||+|++++++|++.| ++|.+++|.. ++++.+..+.. ....++.++.+|++|.+++.+.
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~ 73 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKG-------YEVHGIKRRASSFNTERVDHIYQDPH-TCNPKFHLHYGDLSDTSNLTRI 73 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEECC----------------------CCEEECCCCSSCHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCc-------CEEEEEECCCcccchhhHHHHHhhhh-hcCCCeEEEEeecCCHHHHHHH
Confidence 357899999999999999999998 7999999943 34433333221 1245788999999999999999
Q ss_pred HcC--ccEEeecCCCC
Q 012947 86 CSQ--TKLLLNCVGPY 99 (452)
Q Consensus 86 ~~~--~dvVIn~aGp~ 99 (452)
+++ .|+|||+|+..
T Consensus 74 ~~~~~~d~v~h~aa~~ 89 (357)
T d1db3a_ 74 LREVQPDEVYNLGAMS 89 (357)
T ss_dssp HHHHCCSEEEECCCCC
T ss_pred HhccCCCEEEEeeccc
Confidence 985 59999999863
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.99 E-value=9.8e-11 Score=111.22 Aligned_cols=85 Identities=11% Similarity=0.053 Sum_probs=69.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC-hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~-~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
+...++||||++.||+++++.|+++| ++|++.+|+ .+.++++.+++.. ...++..+.+|++|++++.++++
T Consensus 17 ~gK~~lITGas~GIG~aia~~la~~G-------a~Vvi~~~~~~~~~~~~~~~~~~-~g~~~~~~~~D~~~~~~v~~~~~ 88 (272)
T d1g0oa_ 17 EGKVALVTGAGRGIGREMAMELGRRG-------CKVIVNYANSTESAEEVVAAIKK-NGSDAACVKANVGVVEDIVRMFE 88 (272)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTT-------CEEEEEESSCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcC-------CEEEEEeCCchHHHHHHHHHHHh-hCCceeeEeCCCCCHHHHHHHHH
Confidence 45689999999999999999999999 899999876 5666766665532 24578889999999999988876
Q ss_pred -------CccEEeecCCCCCC
Q 012947 88 -------QTKLLLNCVGPYRL 101 (452)
Q Consensus 88 -------~~dvVIn~aGp~~~ 101 (452)
+.|++||++|....
T Consensus 89 ~~~~~~g~idilV~nag~~~~ 109 (272)
T d1g0oa_ 89 EAVKIFGKLDIVCSNSGVVSF 109 (272)
T ss_dssp HHHHHHSCCCEEEECCCCCCC
T ss_pred HHHHHhCCCCccccccccchh
Confidence 57999999986543
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.99 E-value=1.8e-10 Score=110.36 Aligned_cols=142 Identities=18% Similarity=0.149 Sum_probs=93.3
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhH---HHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR---VKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~k---l~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
-+|||||+++||+.+++.|+++|. ..+.+.+..|+.++ +++..+++.. ...++..+.+|++|++++++++++
T Consensus 4 VvlITGassGIG~a~A~~la~~Ga----~v~~v~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~Dv~~~~~~~~~~~~ 78 (285)
T d1jtva_ 4 VVLITGCSSGIGLHLAVRLASDPS----QSFKVYATLRDLKTQGRLWEAARALAC-PPGSLETLQLDVRDSKSVAAARER 78 (285)
T ss_dssp EEEESCCSSHHHHHHHHHHHTCTT----CCEEEEEEESCGGGTHHHHHHHHHTTC-CTTSEEEEECCTTCHHHHHHHHHT
T ss_pred EEEEccCCCHHHHHHHHHHHHCCC----CeEEEEEecCChhhhHHHHHHHHHHhc-cCCceEEEeccccchHhhhhhhhh
Confidence 368899999999999999999982 11456667777554 4444555532 345788999999999999998864
Q ss_pred -----ccEEeecCCCCCCC-----CHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEE--EcCCCCCcchh
Q 012947 89 -----TKLLLNCVGPYRLH-----GDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLL--VSACGFDSIPA 156 (452)
Q Consensus 89 -----~dvVIn~aGp~~~~-----~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~i--v~~~G~~s~P~ 156 (452)
.|+||||+|..... .....+...+ +++.|....++..++.+.+ ++.|.+| -|.+|+.+.|
T Consensus 79 ~~~g~idilvnnag~~~~~~~~~~~~e~~~~~~~-----vN~~g~~~~~~~~lp~m~~--~~~G~Iv~isS~~g~~~~~- 150 (285)
T d1jtva_ 79 VTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLD-----VNVVGTVRMLQAFLPDMKR--RGSGRVLVTGSVGGLMGLP- 150 (285)
T ss_dssp CTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHH-----HHTHHHHHHHHHHHHHHHH--HTCEEEEEEEEGGGTSCCT-
T ss_pred ccccchhhhhhcccccccccccchhHhhhhhhhh-----cchhHHHHHHHHHHHHHHH--cCCCceEEEechhhcCCCC-
Confidence 69999999865432 2333333333 4566666777777665543 3344433 2555666666
Q ss_pred hHHHHHHhhh
Q 012947 157 ELGVMFNSRQ 166 (452)
Q Consensus 157 dl~~~~~~~~ 166 (452)
....|.++|.
T Consensus 151 ~~~~Y~asKa 160 (285)
T d1jtva_ 151 FNDVYCASKF 160 (285)
T ss_dssp TCHHHHHHHH
T ss_pred CchHHHHHHH
Confidence 3455655444
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=98.98 E-value=8.8e-10 Score=105.87 Aligned_cols=79 Identities=16% Similarity=0.189 Sum_probs=62.0
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec--ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC-
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR--NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR--~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~- 88 (452)
+|||||||||+|++++++|++++ ++|++++| ...+.+.+.. +. ...+++++.+|+.|.+++.+++++
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g-------~~V~~id~~~~~~~~~~~~~-~~--~~~~~~~i~~Di~~~~~l~~~~~~~ 71 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQG-------IDLIVFDNLSRKGATDNLHW-LS--SLGNFEFVHGDIRNKNDVTRLITKY 71 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECCCSTTHHHHHHH-HH--TTCCCEEEECCTTCHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCc-------CEEEEEECCCcccchhHHHH-hh--ccCCcEEEEcccCCHHHHHHHHHhc
Confidence 79999999999999999999998 78988874 1222222221 11 245789999999999999999975
Q ss_pred -ccEEeecCCCCC
Q 012947 89 -TKLLLNCVGPYR 100 (452)
Q Consensus 89 -~dvVIn~aGp~~ 100 (452)
.|+|||+|++..
T Consensus 72 ~~d~Vih~aa~~~ 84 (338)
T d1orra_ 72 MPDSCFHLAGQVA 84 (338)
T ss_dssp CCSEEEECCCCCC
T ss_pred CCceEEeeccccc
Confidence 599999998754
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.98 E-value=4.7e-10 Score=106.52 Aligned_cols=80 Identities=25% Similarity=0.272 Sum_probs=69.8
Q ss_pred EEEEcCCchHHHHHHHHHHHc-CCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc----
Q 012947 13 VIILGASGFTGKYVVREALKL-FNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (452)
Q Consensus 13 ilV~GATG~iG~~va~~L~~~-g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~---- 87 (452)
.|||||+++||+.+++.|++. + .+|++++|+.++++++.+++.. ...++.++.+|++|.++++++++
T Consensus 6 AlVTGas~GIG~a~A~~la~~~g-------~~Vi~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dvs~~~sv~~~~~~~~~ 77 (275)
T d1wmaa1 6 ALVTGGNKGIGLAIVRDLCRLFS-------GDVVLTARDVTRGQAAVQQLQA-EGLSPRFHQLDIDDLQSIRALRDFLRK 77 (275)
T ss_dssp EEESSCSSHHHHHHHHHHHHHSS-------SEEEEEESSHHHHHHHHHHHHH-TTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred EEECCCCCHHHHHHHHHHHHhCC-------CEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEEecCCHHHHHHHHHHHHH
Confidence 499999999999999999987 5 7999999999999999888853 24578899999999999988765
Q ss_pred ---CccEEeecCCCCC
Q 012947 88 ---QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ---~~dvVIn~aGp~~ 100 (452)
+.|+||||||...
T Consensus 78 ~~g~iDiLVnNAGi~~ 93 (275)
T d1wmaa1 78 EYGGLDVLVNNAGIAF 93 (275)
T ss_dssp HHSSEEEEEECCCCCC
T ss_pred hcCCcEEEEEcCCcCC
Confidence 5799999999653
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=98.97 E-value=3.2e-10 Score=110.14 Aligned_cols=77 Identities=16% Similarity=0.181 Sum_probs=61.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHH-HHHcCc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLH-RLCSQT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~-~~~~~~ 89 (452)
|+|+|||||||+|++++++|++++. .+|.++++...+...+.+ ..++.++.+|++|.+++. .+.+++
T Consensus 1 MKILITG~tGfiG~~l~~~Ll~~g~------~~V~~ld~~~~~~~~~~~------~~~~~~i~~Di~~~~~~~~~~~~~~ 68 (342)
T d2blla1 1 MRVLILGVNGFIGNHLTERLLREDH------YEVYGLDIGSDAISRFLN------HPHFHFVEGDISIHSEWIEYHVKKC 68 (342)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTT------CEEEEEESCCGGGGGGTT------CTTEEEEECCTTTCSHHHHHHHHHC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC------CEEEEEeCCCcchhhhcc------CCCeEEEECccCChHHHHHHHHhCC
Confidence 5899999999999999999999873 588888886655443322 357899999998876654 477889
Q ss_pred cEEeecCCCC
Q 012947 90 KLLLNCVGPY 99 (452)
Q Consensus 90 dvVIn~aGp~ 99 (452)
|+|||+|+..
T Consensus 69 d~Vih~a~~~ 78 (342)
T d2blla1 69 DVVLPLVAIA 78 (342)
T ss_dssp SEEEECBCCC
T ss_pred Cccccccccc
Confidence 9999999854
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=98.96 E-value=2.9e-10 Score=105.58 Aligned_cols=73 Identities=18% Similarity=0.147 Sum_probs=60.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCH-HHHHHHHcC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDP-PSLHRLCSQ 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~-~sl~~~~~~ 88 (452)
...+|||||+++||+.+++.|+++| ++|++.+|+++++++. ...++.+|+++. +.+.+-+.+
T Consensus 4 gK~~lVTGas~GIG~aia~~l~~~G-------a~V~~~~r~~~~l~~~----------~~~~~~~Dv~~~~~~~~~~~g~ 66 (234)
T d1o5ia_ 4 DKGVLVLAASRGIGRAVADVLSQEG-------AEVTICARNEELLKRS----------GHRYVVCDLRKDLDLLFEKVKE 66 (234)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHT----------CSEEEECCTTTCHHHHHHHSCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEECCHHHHHhc----------CCcEEEcchHHHHHHHHHHhCC
Confidence 4689999999999999999999999 8999999998877542 236788999763 445555668
Q ss_pred ccEEeecCCCC
Q 012947 89 TKLLLNCVGPY 99 (452)
Q Consensus 89 ~dvVIn~aGp~ 99 (452)
.|++|||||..
T Consensus 67 iD~lVnnAG~~ 77 (234)
T d1o5ia_ 67 VDILVLNAGGP 77 (234)
T ss_dssp CSEEEECCCCC
T ss_pred CcEEEeccccc
Confidence 99999999854
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.95 E-value=3.1e-10 Score=106.24 Aligned_cols=107 Identities=10% Similarity=0.085 Sum_probs=78.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...+|||||++.||+.+++.|+++| ++|++.+|++++++++.+. ..+....+|+++.+.++...+
T Consensus 6 gK~alITGas~GIG~aia~~la~~G-------~~Vi~~~r~~~~l~~~~~~------~~~~~~~~d~~~~~~~~~~~~~~ 72 (245)
T d2ag5a1 6 GKVIILTAAAQGIGQAAALAFAREG-------AKVIATDINESKLQELEKY------PGIQTRVLDVTKKKQIDQFANEV 72 (245)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTT-------CEEEEEESCHHHHGGGGGS------TTEEEEECCTTCHHHHHHHHHHC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHhc------cCCceeeeecccccccccccccc
Confidence 4679999999999999999999999 8999999999998776553 356788899998877776654
Q ss_pred -CccEEeecCCCCCCC-----CHHHHHHHHHhCCcEEEecCcHHHHHHHHHHH
Q 012947 88 -QTKLLLNCVGPYRLH-----GDPVAAACVHSGCDYLDISGEPEFMERMEARY 134 (452)
Q Consensus 88 -~~dvVIn~aGp~~~~-----~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~ 134 (452)
+.|+||||+|..... ...-.+... -+++.+...+++.+++.+
T Consensus 73 ~~id~lVn~ag~~~~~~~~~~~~~~~~~~~-----~vn~~~~~~~~~~~~~~~ 120 (245)
T d2ag5a1 73 ERLDVLFNVAGFVHHGTVLDCEEKDWDFSM-----NLNVRSMYLMIKAFLPKM 120 (245)
T ss_dssp SCCSEEEECCCCCCCBCGGGCCHHHHHHHH-----HHHTHHHHHHHHHHHHHH
T ss_pred ccceeEEecccccCCCChhhCCHHHHHHHH-----HHhhccchhHHHhhCccc
Confidence 689999999965432 122222222 234445556666665544
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.94 E-value=1.8e-10 Score=106.52 Aligned_cols=77 Identities=22% Similarity=0.276 Sum_probs=63.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
.+|+|+|||||+|++++++|++++. ..+|.+.+|++.+.... ....+.+..+|+++.+++.+.++++|
T Consensus 15 k~IlItGaTG~iG~~l~~~Ll~~g~-----~~~v~~~~R~~~~~~~~-------~~~~i~~~~~D~~~~~~~~~~~~~~d 82 (232)
T d2bkaa1 15 KSVFILGASGETGRVLLKEILEQGL-----FSKVTLIGRRKLTFDEE-------AYKNVNQEVVDFEKLDDYASAFQGHD 82 (232)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHHTC-----CSEEEEEESSCCCCCSG-------GGGGCEEEECCGGGGGGGGGGGSSCS
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCC-----CCEEEEEecChhhhccc-------ccceeeeeeecccccccccccccccc
Confidence 5899999999999999999999983 13899999976543221 12467888899999999999999999
Q ss_pred EEeecCCCC
Q 012947 91 LLLNCVGPY 99 (452)
Q Consensus 91 vVIn~aGp~ 99 (452)
+||||+|..
T Consensus 83 ~vi~~~~~~ 91 (232)
T d2bkaa1 83 VGFCCLGTT 91 (232)
T ss_dssp EEEECCCCC
T ss_pred ccccccccc
Confidence 999999864
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.94 E-value=1.6e-10 Score=111.62 Aligned_cols=110 Identities=11% Similarity=0.029 Sum_probs=79.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec---------ChhHHHHHHHHhCCCCCCCccEEEEeCCCHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR---------NPTRVKQALQWASPSHSLSIPILTADTTDPP 80 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR---------~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~ 80 (452)
...+|||||+++||+.+++.|+++| ++|++.+| +.++++++.+++. .......+|+.|.+
T Consensus 7 gKvalITGas~GIG~aiA~~la~~G-------a~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~d~~~~~ 75 (302)
T d1gz6a_ 7 GRVVLVTGAGGGLGRAYALAFAERG-------ALVVVNDLGGDFKGVGKGSSAADKVVEEIR----RRGGKAVANYDSVE 75 (302)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTT-------CEEEEECCCBCTTSCBCCSHHHHHHHHHHH----HTTCEEEEECCCGG
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcC-------CEEEEEeCCchhhhhhhhHHHHHHHHHHHh----hcccccccccchHH
Confidence 4579999999999999999999999 89999855 4566777777764 34567788999988
Q ss_pred HHHHHHc-------CccEEeecCCCCCCC-----CHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHH
Q 012947 81 SLHRLCS-------QTKLLLNCVGPYRLH-----GDPVAAACVHSGCDYLDISGEPEFMERMEARYH 135 (452)
Q Consensus 81 sl~~~~~-------~~dvVIn~aGp~~~~-----~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~ 135 (452)
+++++++ +.|+||||||..... .....+...+ +++.|....++..++.+.
T Consensus 76 ~~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~-----vNl~g~~~~~~~~~p~m~ 137 (302)
T d1gz6a_ 76 AGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQR-----VHLRGSFQVTRAAWDHMK 137 (302)
T ss_dssp GHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH-----HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhc-----eeehhhHHHHHHhHHHHH
Confidence 8777665 689999999965432 2222333332 455566666677655543
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.94 E-value=2.1e-10 Score=107.74 Aligned_cols=123 Identities=11% Similarity=0.019 Sum_probs=78.8
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc----
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~---- 87 (452)
++|||||+++||+.+++.|+++| ++|++.+|+.++++++..... ....+|+.|+++++++++
T Consensus 2 TAlVTGas~GiG~aiA~~la~~G-------a~V~i~~r~~~~~~~~~~~~~-------~~~~~dv~~~~~~~~~~~~~~~ 67 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAG-------HTVACHDESFKQKDELEAFAE-------TYPQLKPMSEQEPAELIEAVTS 67 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTT-------CEEEECCGGGGSHHHHHHHHH-------HCTTSEECCCCSHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHhhhC-------cEEEeccCCHHHHHHHHHHHHH
Confidence 58999999999999999999999 899999999988877654321 223467777766666654
Q ss_pred ---CccEEeecCCCCCCC------CHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEE--cCCCCCcch
Q 012947 88 ---QTKLLLNCVGPYRLH------GDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLV--SACGFDSIP 155 (452)
Q Consensus 88 ---~~dvVIn~aGp~~~~------~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv--~~~G~~s~P 155 (452)
+.|++|||||..... ...-.+.+.+ +++.+....++..++.+. .++.|.+|. +..++.+.|
T Consensus 68 ~~G~iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~-----vnl~~~~~~~~~~~~~m~--~~~~G~IV~isS~~~~~~~~ 139 (252)
T d1zmta1 68 AYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVE-----ALQIRPFALVNAVASQMK--KRKSGHIIFITSATPFGPWK 139 (252)
T ss_dssp HHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHH-----HHTHHHHHHHHHHHHHHH--HHTCCEEEEECCSTTTSCCT
T ss_pred HcCCCCEEEECCcCCCCCCChhhCCHHHHHHHHH-----HHhHHHHHHHHHHHHhhc--ccccceeecccccccccccc
Confidence 689999999853322 1222333332 344455555566554443 334454433 333443433
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.93 E-value=7.9e-10 Score=108.25 Aligned_cols=80 Identities=11% Similarity=0.047 Sum_probs=64.8
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 012947 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 7 ~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
|++.|+|+|||||||+|++++++|++++ ++|++++|...+. .... .....+..+|+.|.+.+.+++
T Consensus 12 ~~~nMKILVTGgsGfIGs~lv~~L~~~g-------~~V~~~d~~~~~~--~~~~-----~~~~~~~~~D~~~~~~~~~~~ 77 (363)
T d2c5aa1 12 PSENLKISITGAGGFIASHIARRLKHEG-------HYVIASDWKKNEH--MTED-----MFCDEFHLVDLRVMENCLKVT 77 (363)
T ss_dssp TTSCCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESSCCSS--SCGG-----GTCSEEEECCTTSHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCc-------CEEEEEeCCCccc--hhhh-----cccCcEEEeechhHHHHHHHh
Confidence 4467999999999999999999999998 7999888754321 0111 235678899999999999999
Q ss_pred cCccEEeecCCCCC
Q 012947 87 SQTKLLLNCVGPYR 100 (452)
Q Consensus 87 ~~~dvVIn~aGp~~ 100 (452)
+++|.|||+|+...
T Consensus 78 ~~~d~Vih~a~~~~ 91 (363)
T d2c5aa1 78 EGVDHVFNLAADMG 91 (363)
T ss_dssp TTCSEEEECCCCCC
T ss_pred hcCCeEeecccccc
Confidence 99999999997654
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.92 E-value=3e-09 Score=103.55 Aligned_cols=77 Identities=18% Similarity=0.234 Sum_probs=61.2
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC----hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN----PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~----~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
.|||||||||+|++++++|++.+ ++|.+++|. .+......... ..++.++.+|+.|.+.++++++
T Consensus 3 ~ILVTGatGfIG~~lv~~Ll~~g-------~~V~~~d~~~~~~~~~~~~~~~~~----~~~v~~~~~Dl~d~~~l~~~~~ 71 (347)
T d1z45a2 3 IVLVTGGAGYIGSHTVVELIENG-------YDCVVADNLSNSTYDSVARLEVLT----KHHIPFYEVDLCDRKGLEKVFK 71 (347)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECCSSCCTHHHHHHHHHH----TSCCCEEECCTTCHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCc-------CeEEEEECCCCcchhHHHhHHhhc----ccCCeEEEeecCCHHHHHHHHh
Confidence 59999999999999999999998 789888752 12222222211 3578999999999999999887
Q ss_pred --CccEEeecCCCC
Q 012947 88 --QTKLLLNCVGPY 99 (452)
Q Consensus 88 --~~dvVIn~aGp~ 99 (452)
++|+|||+|+..
T Consensus 72 ~~~~d~VihlAa~~ 85 (347)
T d1z45a2 72 EYKIDSVIHFAGLK 85 (347)
T ss_dssp HSCCCEEEECCSCC
T ss_pred ccCCCEEEEccccc
Confidence 789999999854
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=98.90 E-value=1.4e-09 Score=105.63 Aligned_cols=81 Identities=14% Similarity=0.105 Sum_probs=67.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..+|+|||||||+|++++++|++.| ++|.+.+|+..+...+.+... ....++.+.+|++|++.+.++++
T Consensus 8 ~KkILVTG~tGfIGs~lv~~Ll~~g-------~~V~~~~r~~~~~~~~~~~~~--~~~~i~~~~~Dl~d~~~l~~~~~~~ 78 (356)
T d1rkxa_ 8 GKRVFVTGHTGFKGGWLSLWLQTMG-------ATVKGYSLTAPTVPSLFETAR--VADGMQSEIGDIRDQNKLLESIREF 78 (356)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESSCSSSSCHHHHTT--TTTTSEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEECCCCccHHHHhhhh--cccCCeEEEeeccChHhhhhhhhhc
Confidence 4689999999999999999999998 899999998776555544432 23578999999999999999987
Q ss_pred CccEEeecCCCC
Q 012947 88 QTKLLLNCVGPY 99 (452)
Q Consensus 88 ~~dvVIn~aGp~ 99 (452)
..|+|+|+++..
T Consensus 79 ~~~~v~~~aa~~ 90 (356)
T d1rkxa_ 79 QPEIVFHMAAQP 90 (356)
T ss_dssp CCSEEEECCSCC
T ss_pred hhhhhhhhhccc
Confidence 569999999753
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.87 E-value=3e-09 Score=96.30 Aligned_cols=76 Identities=18% Similarity=0.129 Sum_probs=65.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
.+|+|+|||||+|++++++|++++. ...++...|++++.+.+ ..++.++.+|++|.+++.++++++|
T Consensus 4 ~tVlVtGatG~iG~~l~~~Ll~~g~-----~v~v~~~~R~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~~~~~d 70 (252)
T d2q46a1 4 PTVLVTGASGRTGQIVYKKLKEGSD-----KFVAKGLVRSAQGKEKI--------GGEADVFIGDITDADSINPAFQGID 70 (252)
T ss_dssp CEEEEESTTSTTHHHHHHHHHHTTT-----TCEEEEEESCHHHHHHT--------TCCTTEEECCTTSHHHHHHHHTTCS
T ss_pred CEEEEECCccHHHHHHHHHHHHCCC-----cEEEEEEcCCHHHHHhc--------cCCcEEEEeeeccccccccccccce
Confidence 4799999999999999999999983 15677788999876542 3478999999999999999999999
Q ss_pred EEeecCCCC
Q 012947 91 LLLNCVGPY 99 (452)
Q Consensus 91 vVIn~aGp~ 99 (452)
.|||+++..
T Consensus 71 ~vi~~a~~~ 79 (252)
T d2q46a1 71 ALVILTSAV 79 (252)
T ss_dssp EEEECCCCC
T ss_pred eeEEEEeec
Confidence 999999753
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=98.87 E-value=1.9e-09 Score=104.88 Aligned_cols=85 Identities=12% Similarity=0.068 Sum_probs=67.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~-~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
..+|+|||||||+|++++++|+++| ++|.++.|+.++...+...... ........+.+|+.|.+++.+++.+
T Consensus 11 gk~VlVTG~sGfIGs~l~~~Ll~~G-------~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 83 (342)
T d1y1pa1 11 GSLVLVTGANGFVASHVVEQLLEHG-------YKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKG 83 (342)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTT
T ss_pred cCEEEEECCCCHHHHHHHHHHHHCc-------CEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhccc
Confidence 4689999999999999999999998 8999999998887655432211 0112234567899999999999999
Q ss_pred ccEEeecCCCCCC
Q 012947 89 TKLLLNCVGPYRL 101 (452)
Q Consensus 89 ~dvVIn~aGp~~~ 101 (452)
+|.|+|++++...
T Consensus 84 ~~~v~~~a~~~~~ 96 (342)
T d1y1pa1 84 AAGVAHIASVVSF 96 (342)
T ss_dssp CSEEEECCCCCSC
T ss_pred chhhhhhcccccc
Confidence 9999999987543
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=98.85 E-value=7.2e-09 Score=97.87 Aligned_cols=79 Identities=19% Similarity=0.281 Sum_probs=64.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh-----HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-----RVKQALQWASPSHSLSIPILTADTTDPPSLHR 84 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~-----kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~ 84 (452)
+.+|+|+|||||+|++++++|+++| ++|.++.|+.. +.+.+ ..+. ..+++++.+|+.|.+++.+
T Consensus 3 k~KILVtGatG~iG~~l~~~L~~~G-------~~V~~~~R~~~~~~~~~~~~~-~~~~---~~~v~~v~~d~~d~~~~~~ 71 (312)
T d1qyda_ 3 KSRVLIVGGTGYIGKRIVNASISLG-------HPTYVLFRPEVVSNIDKVQML-LYFK---QLGAKLIEASLDDHQRLVD 71 (312)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTT-------CCEEEECCSCCSSCHHHHHHH-HHHH---TTTCEEECCCSSCHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC-------CEEEEEECCCcccchhHHHHH-hhhc---cCCcEEEEeecccchhhhh
Confidence 4579999999999999999999998 78999999653 22222 2221 3578999999999999999
Q ss_pred HHcCccEEeecCCCC
Q 012947 85 LCSQTKLLLNCVGPY 99 (452)
Q Consensus 85 ~~~~~dvVIn~aGp~ 99 (452)
.+++++.+++++++.
T Consensus 72 ~~~~~~~~~~~~~~~ 86 (312)
T d1qyda_ 72 ALKQVDVVISALAGG 86 (312)
T ss_dssp HHTTCSEEEECCCCS
T ss_pred hccCcchhhhhhhhc
Confidence 999999999998754
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=98.81 E-value=1.2e-08 Score=99.21 Aligned_cols=101 Identities=14% Similarity=0.132 Sum_probs=75.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCH-HHHHHHHcC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDP-PSLHRLCSQ 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~-~sl~~~~~~ 88 (452)
+.+|+|+|||||+|++++++|+++| ++|++..|+.++..... +. ...+++++.+|+.|+ +.++.++..
T Consensus 3 kktIlVtGatG~iG~~lv~~Ll~~G-------~~V~~l~R~~~~~~~~~--~~--~~~~v~~~~gD~~d~~~~~~~a~~~ 71 (350)
T d1xgka_ 3 KKTIAVVGATGRQGASLIRVAAAVG-------HHVRAQVHSLKGLIAEE--LQ--AIPNVTLFQGPLLNNVPLMDTLFEG 71 (350)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTT-------CCEEEEESCSCSHHHHH--HH--TSTTEEEEESCCTTCHHHHHHHHTT
T ss_pred CCEEEEECCChHHHHHHHHHHHhCC-------CeEEEEECCcchhhhhh--hc--ccCCCEEEEeeCCCcHHHHHHHhcC
Confidence 4689999999999999999999998 89999999877654321 11 135789999999885 457888999
Q ss_pred ccEEeecCCCCCCC----CHHHHHHHHHhCC-cEEEec
Q 012947 89 TKLLLNCVGPYRLH----GDPVAAACVHSGC-DYLDIS 121 (452)
Q Consensus 89 ~dvVIn~aGp~~~~----~~~vv~ac~~~g~-~yvDls 121 (452)
+++++.+..+.... ..+++++|.++|+ +++-++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~aa~~agv~~~v~~S 109 (350)
T d1xgka_ 72 AHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYS 109 (350)
T ss_dssp CSEEEECCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEE
T ss_pred CceEEeecccccchhhhhhhHHHHHHHHhCCCceEEEe
Confidence 99888776543322 2567788887776 444443
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.78 E-value=8.3e-09 Score=101.97 Aligned_cols=78 Identities=14% Similarity=0.138 Sum_probs=60.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC--------------------hhHHHHHHHHhCCCCCCCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN--------------------PTRVKQALQWASPSHSLSIP 70 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~--------------------~~kl~~l~~~l~~~~~~~v~ 70 (452)
++|+|||||||+|++++++|++.| ++|++++.- .+.+....... ..+++
T Consensus 2 ~kILVTGatGfiG~~lv~~Ll~~g-------~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~i~ 70 (393)
T d1i24a_ 2 SRVMVIGGDGYCGWATALHLSKKN-------YEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT----GKSIE 70 (393)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHH----CCCCE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCc-------CEEEEEecCCcccccccccccccccccchHHHHHHHHhhc----CCCcE
Confidence 689999999999999999999998 799888621 11122222211 35789
Q ss_pred EEEEeCCCHHHHHHHHc--CccEEeecCCCC
Q 012947 71 ILTADTTDPPSLHRLCS--QTKLLLNCVGPY 99 (452)
Q Consensus 71 ~v~~Dl~d~~sl~~~~~--~~dvVIn~aGp~ 99 (452)
++.+|+.|.+.++++++ +.|+|||+|+..
T Consensus 71 ~~~~Dl~d~~~l~~~~~~~~~d~ViHlAa~~ 101 (393)
T d1i24a_ 71 LYVGDICDFEFLAESFKSFEPDSVVHFGEQR 101 (393)
T ss_dssp EEESCTTSHHHHHHHHHHHCCSEEEECCSCC
T ss_pred EEEccCCCHHHHHHHHHhhcchheecccccc
Confidence 99999999999999998 569999999753
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=98.78 E-value=1.4e-08 Score=94.99 Aligned_cols=96 Identities=20% Similarity=0.298 Sum_probs=76.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhH------HHHHHHHhCCCCCCCccEEEEeCCCHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR------VKQALQWASPSHSLSIPILTADTTDPPSLH 83 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~k------l~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~ 83 (452)
+.+|+|+|||||+|++++++|++.| ++|.++.|+... ... ...+. ...+.++.+|+.+.+.+.
T Consensus 3 kkKILVtGatG~iG~~l~~~L~~~G-------~~V~~l~R~~~~~~~~~~~~~-~~~~~---~~~~~~~~~d~~~~~~~~ 71 (307)
T d1qyca_ 3 RSRILLIGATGYIGRHVAKASLDLG-------HPTFLLVRESTASSNSEKAQL-LESFK---ASGANIVHGSIDDHASLV 71 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTT-------CCEEEECCCCCTTTTHHHHHH-HHHHH---TTTCEEECCCTTCHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-------CeEEEEECCCccccchhHHHH-HHhhc---cCCcEEEEeecccchhhh
Confidence 3679999999999999999999998 799999997543 222 22221 346789999999999999
Q ss_pred HHHcCccEEeecCCCCCCCC-HHHHHHHHHhCCc
Q 012947 84 RLCSQTKLLLNCVGPYRLHG-DPVAAACVHSGCD 116 (452)
Q Consensus 84 ~~~~~~dvVIn~aGp~~~~~-~~vv~ac~~~g~~ 116 (452)
+.+++++.|+|+++.....+ ..++++|.+.++.
T Consensus 72 ~~~~~~~~vi~~~~~~~~~~~~~~~~a~~~~~~~ 105 (307)
T d1qyca_ 72 EAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTV 105 (307)
T ss_dssp HHHHTCSEEEECCCGGGSGGGHHHHHHHHHHCCC
T ss_pred hhhhhceeeeecccccccchhhHHHHHHHHhccc
Confidence 99999999999998765544 6788888887774
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=98.77 E-value=2.3e-09 Score=104.33 Aligned_cols=82 Identities=13% Similarity=0.223 Sum_probs=60.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC-hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~-~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
.++|||||||||+|++++++|++.+. ..++++.++. ..........+ ...+++++.+|+.|.+.+..++.+
T Consensus 2 ~mkILVTGgtGfIGs~lv~~L~~~g~-----~v~v~~~d~~~~~~~~~~~~~~---~~~~i~~~~~Di~d~~~~~~~~~~ 73 (346)
T d1oc2a_ 2 FKNIIVTGGAGFIGSNFVHYVYNNHP-----DVHVTVLDKLTYAGNKANLEAI---LGDRVELVVGDIADAELVDKLAAK 73 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCT-----TCEEEEEECCCTTCCGGGTGGG---CSSSEEEEECCTTCHHHHHHHHTT
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHCCC-----CeEEEEEeCCCccccHHHHHHh---hcCCeEEEEccCCCHHHHHHHHhh
Confidence 36899999999999999999999982 1344444421 11111111122 235789999999999999999999
Q ss_pred ccEEeecCCCC
Q 012947 89 TKLLLNCVGPY 99 (452)
Q Consensus 89 ~dvVIn~aGp~ 99 (452)
.+.|+|+|+..
T Consensus 74 ~~~v~~~a~~~ 84 (346)
T d1oc2a_ 74 ADAIVHYAAES 84 (346)
T ss_dssp CSEEEECCSCC
T ss_pred hhhhhhhhhcc
Confidence 99999999754
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=98.76 E-value=2.3e-08 Score=98.47 Aligned_cols=85 Identities=16% Similarity=0.229 Sum_probs=61.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec------------ChhHHHHHHHHhCC----CCCCCccEEE
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR------------NPTRVKQALQWASP----SHSLSIPILT 73 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR------------~~~kl~~l~~~l~~----~~~~~v~~v~ 73 (452)
.|+|+|||||||+|++++++|++++. ++|+++++ +.+......+.... .....+.++.
T Consensus 2 ~MKVLITG~tGfIGs~lv~~LL~~~~------~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (383)
T d1gy8a_ 2 HMRVLVCGGAGYIGSHFVRALLRDTN------HSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEV 75 (383)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCC------CEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEE
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHhCC------CEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEE
Confidence 37899999999999999999997642 78998874 11222222222211 1124578999
Q ss_pred EeCCCHHHHHHHHc---CccEEeecCCCCC
Q 012947 74 ADTTDPPSLHRLCS---QTKLLLNCVGPYR 100 (452)
Q Consensus 74 ~Dl~d~~sl~~~~~---~~dvVIn~aGp~~ 100 (452)
+|+.|.+.++++++ .+|+|||+|++..
T Consensus 76 ~Di~d~~~l~~~~~~~~~~d~ViH~Aa~~~ 105 (383)
T d1gy8a_ 76 GDVRNEDFLNGVFTRHGPIDAVVHMCAFLA 105 (383)
T ss_dssp SCTTCHHHHHHHHHHSCCCCEEEECCCCCC
T ss_pred CcccCHHHhhhhhhccceeehhhccccccc
Confidence 99999999999986 5699999998643
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=98.74 E-value=4.7e-09 Score=103.18 Aligned_cols=79 Identities=20% Similarity=0.279 Sum_probs=58.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEE-EEEecCh-h-HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNP-T-RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v-~iagR~~-~-kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
|+|||||||||+|++++++|++.+ +++ +++++.. . +.+.+ ..+. ...++.++.+|++|.+.+.++++
T Consensus 1 MkILItG~tGfIGs~l~~~L~~~g-------~~vv~~~d~~~~~~~~~~~-~~~~--~~~~~~~~~~Dl~d~~~l~~~~~ 70 (361)
T d1kewa_ 1 MKILITGGAGFIGSAVVRHIIKNT-------QDTVVNIDKLTYAGNLESL-SDIS--ESNRYNFEHADICDSAEITRIFE 70 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHC-------SCEEEEEECCCTTCCGGGG-TTTT--TCTTEEEEECCTTCHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-------CCEEEEEeCCCccccHHHH-Hhhh--hcCCcEEEEccCCCHHHHHHHHH
Confidence 589999999999999999999998 444 4444321 1 11111 1121 24578999999999999999887
Q ss_pred --CccEEeecCCCC
Q 012947 88 --QTKLLLNCVGPY 99 (452)
Q Consensus 88 --~~dvVIn~aGp~ 99 (452)
++|+|||+|+..
T Consensus 71 ~~~~d~VihlAa~~ 84 (361)
T d1kewa_ 71 QYQPDAVMHLAAES 84 (361)
T ss_dssp HHCCSEEEECCSCC
T ss_pred hCCCCEEEECcccc
Confidence 589999999753
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=98.69 E-value=2.1e-08 Score=93.77 Aligned_cols=81 Identities=15% Similarity=0.099 Sum_probs=64.9
Q ss_pred CCeEEEEcCCc--hHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 10 LFDVIILGASG--FTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 10 ~~~ilV~GATG--~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
...++||||+| +||+.++++|+++| ++|++.+|+++..++..+... ...+...+.+|++|+++++++++
T Consensus 8 gK~alITGas~~~GIG~aiA~~la~~G-------a~V~i~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~ 78 (256)
T d1ulua_ 8 GKKALVMGVTNQRSLGFAIAAKLKEAG-------AEVALSYQAERLRPEAEKLAE--ALGGALLFRADVTQDEELDALFA 78 (256)
T ss_dssp TCEEEEESCCCSSSHHHHHHHHHHHTT-------CEEEEEESSGGGHHHHHHHHH--HTTCCEEEECCTTCHHHHHHHHH
T ss_pred CCEEEEECCCCCchHHHHHHHHHHHCC-------CEEEEEeCcHHHHHHHHHhhh--ccCcccccccccCCHHHHHHHHH
Confidence 45799999998 79999999999999 899999998765544332221 13456789999999999988876
Q ss_pred -------CccEEeecCCCC
Q 012947 88 -------QTKLLLNCVGPY 99 (452)
Q Consensus 88 -------~~dvVIn~aGp~ 99 (452)
+.|++|||||..
T Consensus 79 ~~~~~~g~iDilVnnag~~ 97 (256)
T d1ulua_ 79 GVKEAFGGLDYLVHAIAFA 97 (256)
T ss_dssp HHHHHHSSEEEEEECCCCC
T ss_pred HHHHhcCCceEEEeccccc
Confidence 579999999854
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.68 E-value=3.6e-08 Score=95.49 Aligned_cols=78 Identities=19% Similarity=0.251 Sum_probs=60.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec------C----hhHHHHHHHHhCCCCCCCccEEEEeCCCHH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR------N----PTRVKQALQWASPSHSLSIPILTADTTDPP 80 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR------~----~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~ 80 (452)
.+|+|||||||+|++++++|++.+ ++|.+.+| + .+.++.+. .+. ..++.++.+|++|.+
T Consensus 3 kKILITG~tGfIGs~lv~~Ll~~g-------~~V~~ld~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~Dl~d~~ 71 (346)
T d1ek6a_ 3 EKVLVTGGAGYIGSHTVLELLEAG-------YLPVVIDNFHNAFRGGGSLPESLRRVQ-ELT---GRSVEFEEMDILDQG 71 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTT-------CCEEEEECSSSSCBCSSSSBHHHHHHH-HHH---TCCCEEEECCTTCHH
T ss_pred CeEEEECCCcHHHHHHHHHHHHCc-------CEEEEEECCCccccccccchHHHHHHH-Hhc---CCCcEEEEeeccccc
Confidence 389999999999999999999998 68888753 1 22333322 221 357899999999999
Q ss_pred HHHHHHcC--ccEEeecCCCC
Q 012947 81 SLHRLCSQ--TKLLLNCVGPY 99 (452)
Q Consensus 81 sl~~~~~~--~dvVIn~aGp~ 99 (452)
.+.+++.. .++++|+|+..
T Consensus 72 ~l~~~~~~~~~~~i~h~Aa~~ 92 (346)
T d1ek6a_ 72 ALQRLFKKYSFMAVIHFAGLK 92 (346)
T ss_dssp HHHHHHHHCCEEEEEECCSCC
T ss_pred ccccccccccccccccccccc
Confidence 99998875 56899999743
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.67 E-value=2.9e-08 Score=96.07 Aligned_cols=83 Identities=14% Similarity=0.215 Sum_probs=63.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec----ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR----NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHR 84 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR----~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~ 84 (452)
.+.+|||||||||+|++++++|.+.| ++|.+++| +...++.+..........++.++.+|+.|...+..
T Consensus 15 ~~k~iLVTG~tGfIGs~lv~~L~~~g-------~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~ 87 (341)
T d1sb8a_ 15 QPKVWLITGVAGFIGSNLLETLLKLD-------QKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNN 87 (341)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHH
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCc-------CEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccc
Confidence 35689999999999999999999998 79999886 22333333222111112467899999999999999
Q ss_pred HHcCccEEeecCCC
Q 012947 85 LCSQTKLLLNCVGP 98 (452)
Q Consensus 85 ~~~~~dvVIn~aGp 98 (452)
.....+.|+|++..
T Consensus 88 ~~~~~~~v~~~~a~ 101 (341)
T d1sb8a_ 88 ACAGVDYVLHQAAL 101 (341)
T ss_dssp HHTTCSEEEECCSC
T ss_pred cccccccccccccc
Confidence 99999999999864
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.66 E-value=1.3e-08 Score=97.97 Aligned_cols=83 Identities=19% Similarity=0.150 Sum_probs=61.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh-----hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-----TRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~-----~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
.++||||||||+|++++++|++.| ++|+.++|.. ++++.+...........+.++.+|+.+.+++.+.
T Consensus 2 k~~LVTGatGfiG~~lv~~Ll~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~ 74 (339)
T d1n7ha_ 2 KIALITGITGQDGSYLTEFLLGKG-------YEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRW 74 (339)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHH
T ss_pred CEEEEeCCccHHHHHHHHHHHHCc-------CEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHH
Confidence 479999999999999999999998 8999999853 2332221111000134678899999999999998
Q ss_pred Hc--CccEEeecCCCCC
Q 012947 86 CS--QTKLLLNCVGPYR 100 (452)
Q Consensus 86 ~~--~~dvVIn~aGp~~ 100 (452)
++ ++|+|||+|+...
T Consensus 75 ~~~~~~D~Vih~Aa~~~ 91 (339)
T d1n7ha_ 75 IDVIKPDEVYNLAAQSH 91 (339)
T ss_dssp HHHHCCSEEEECCSCCC
T ss_pred Hhhhccchhhhcccccc
Confidence 76 6799999998643
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.66 E-value=1.9e-08 Score=97.29 Aligned_cols=80 Identities=18% Similarity=0.220 Sum_probs=58.8
Q ss_pred eE-EEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh-----HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 012947 12 DV-IILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-----RVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 12 ~i-lV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~-----kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
+| ||||||||+|++++++|++.| ++|..++|..+ +++.+..........++.++.+|++|.+.+.++
T Consensus 2 KI~LVTG~tGfIG~~l~~~Ll~~g-------~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 74 (347)
T d1t2aa_ 2 NVALITGITGQDGSYLAEFLLEKG-------YEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKI 74 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHH
T ss_pred CEEEEecCCcHHHHHHHHHHHHCc-------CEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHH
Confidence 68 999999999999999999998 89999999543 222221111111134678999999999999999
Q ss_pred Hc--CccEEeecCCC
Q 012947 86 CS--QTKLLLNCVGP 98 (452)
Q Consensus 86 ~~--~~dvVIn~aGp 98 (452)
+. +.++|+|+++.
T Consensus 75 ~~~~~~~~v~~~~a~ 89 (347)
T d1t2aa_ 75 INEVKPTEIYNLGAQ 89 (347)
T ss_dssp HHHHCCSEEEECCSC
T ss_pred Hhhcccceeeeeeec
Confidence 86 46788888864
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.63 E-value=2.3e-09 Score=103.18 Aligned_cols=74 Identities=12% Similarity=0.198 Sum_probs=50.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh-hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~-~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
.+|+|||||||+|++++++|++.+ ++|.+++|.. .+.+.+ .... ...++++...|+ ++.++.++
T Consensus 2 KKIlVtG~sGfiG~~lv~~L~~~g-------~~V~~~d~~~~~~~~~~-~~~~--~~~~~d~~~~~~-----~~~~~~~~ 66 (312)
T d2b69a1 2 KRILITGGAGFVGSHLTDKLMMDG-------HEVTVVDNFFTGRKRNV-EHWI--GHENFELINHDV-----VEPLYIEV 66 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECCSSCCGGGT-GGGT--TCTTEEEEECCT-----TSCCCCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCc-------CEEEEEeCCCcCCHHHH-HHhc--CCCceEEEehHH-----HHHHHcCC
Confidence 579999999999999999999998 7898888732 222221 1111 122344444443 45566789
Q ss_pred cEEeecCCCC
Q 012947 90 KLLLNCVGPY 99 (452)
Q Consensus 90 dvVIn~aGp~ 99 (452)
|+|||+|+..
T Consensus 67 d~VihlAa~~ 76 (312)
T d2b69a1 67 DQIYHLASPA 76 (312)
T ss_dssp SEEEECCSCC
T ss_pred CEEEECcccC
Confidence 9999999854
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=98.62 E-value=4.1e-08 Score=91.66 Aligned_cols=83 Identities=16% Similarity=0.144 Sum_probs=67.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCce-EEEEEecCh---hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIK-SLALAGRNP---TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~-~v~iagR~~---~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
-.+|||||+|+||+.++++|+++| . +|++++|+. +.++++.+++.. ...++.++.+|++|++++++++
T Consensus 10 gt~lVTGgs~GIG~a~a~~la~~G-------a~~vvl~~R~~~~~~~~~~~~~~l~~-~g~~v~~~~~Dv~d~~~~~~~~ 81 (259)
T d2fr1a1 10 GTVLVTGGTGGVGGQIARWLARRG-------APHLLLVSRSGPDADGAGELVAELEA-LGARTTVAACDVTDRESVRELL 81 (259)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHT-------CSEEEEEESSGGGSTTHHHHHHHHHH-TTCEEEEEECCTTCHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-------CCEEEEEeCCccCHHHHHHHHHHHHh-ccccccccccccchHHHHHHhh
Confidence 479999999999999999999998 5 689999974 345555555532 2357889999999999999988
Q ss_pred cC------ccEEeecCCCCCC
Q 012947 87 SQ------TKLLLNCVGPYRL 101 (452)
Q Consensus 87 ~~------~dvVIn~aGp~~~ 101 (452)
+. .|.|||++|....
T Consensus 82 ~~i~~~~~i~~vv~~ag~~~~ 102 (259)
T d2fr1a1 82 GGIGDDVPLSAVFHAAATLDD 102 (259)
T ss_dssp HTSCTTSCEEEEEECCCCCCC
T ss_pred ccccccccccccccccccccc
Confidence 74 6899999997543
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=98.60 E-value=1e-08 Score=96.23 Aligned_cols=63 Identities=13% Similarity=0.283 Sum_probs=49.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--C
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--Q 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--~ 88 (452)
|+|||||||||+|++++++|.+.+ . ++.+.++... +.+|++|.+.++++++ +
T Consensus 1 MKILItG~tGfiG~~l~~~L~~~g-------~-~v~~~~~~~~------------------~~~Dl~~~~~~~~~i~~~~ 54 (298)
T d1n2sa_ 1 MNILLFGKTGQVGWELQRSLAPVG-------N-LIALDVHSKE------------------FCGDFSNPKGVAETVRKLR 54 (298)
T ss_dssp CEEEEECTTSHHHHHHHHHTTTTS-------E-EEEECTTCSS------------------SCCCTTCHHHHHHHHHHHC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC-------C-EEEEECCCcc------------------ccCcCCCHHHHHHHHHHcC
Confidence 689999999999999999998877 3 4444443211 2368999999999997 4
Q ss_pred ccEEeecCCCC
Q 012947 89 TKLLLNCVGPY 99 (452)
Q Consensus 89 ~dvVIn~aGp~ 99 (452)
+|+|||+||..
T Consensus 55 ~D~Vih~Aa~~ 65 (298)
T d1n2sa_ 55 PDVIVNAAAHT 65 (298)
T ss_dssp CSEEEECCCCC
T ss_pred CCEEEEecccc
Confidence 69999999843
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.56 E-value=6e-08 Score=92.55 Aligned_cols=79 Identities=15% Similarity=0.117 Sum_probs=61.0
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHH-HHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC--
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRV-KQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl-~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~-- 88 (452)
+|+|||||||+|++++++|++.| ++|..++|..... ...++.+. ...++.++.+|+.|.+.+.+.+.+
T Consensus 2 ~vLItG~tGfiG~~l~~~Ll~~g-------~~V~~~~r~~~~~~~~~l~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~~ 72 (321)
T d1rpna_ 2 SALVTGITGQDGAYLAKLLLEKG-------YRVHGLVARRSSDTRWRLRELG--IEGDIQYEDGDMADACSVQRAVIKAQ 72 (321)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECCCSSCCCHHHHHTT--CGGGEEEEECCTTCHHHHHHHHHHHC
T ss_pred EEEEECCCCHHHHHHHHHHHHCc-------CEEEEEECCCCcccHHHHHHhc--ccCCcEEEEccccChHHhhhhhcccc
Confidence 79999999999999999999998 8999999864321 12222332 235688999999999999988774
Q ss_pred ccEEeecCCCC
Q 012947 89 TKLLLNCVGPY 99 (452)
Q Consensus 89 ~dvVIn~aGp~ 99 (452)
.++++|+++..
T Consensus 73 ~~~~~~~a~~~ 83 (321)
T d1rpna_ 73 PQEVYNLAAQS 83 (321)
T ss_dssp CSEEEECCSCC
T ss_pred ccccccccccc
Confidence 57888887643
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=98.54 E-value=2.3e-08 Score=96.06 Aligned_cols=85 Identities=14% Similarity=0.167 Sum_probs=60.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~--~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
|+|+|||||||+|++++++|++++.... ...++...++.. .+...+ ..+. ...++.++.+|..+...+......
T Consensus 1 MkIlItG~tGfIG~~l~~~L~~~g~~v~-~~~~i~~~d~~~~~~~~~~~-~~~~--~~~~~~~~~~d~~~~~~~~~~~~~ 76 (322)
T d1r6da_ 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDV-PADEVIVLDSLTYAGNRANL-APVD--ADPRLRFVHGDIRDAGLLARELRG 76 (322)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTS-CCSEEEEEECCCTTCCGGGG-GGGT--TCTTEEEEECCTTCHHHHHHHTTT
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCcc-CCceEEEEeCCCccccHhHh-hhhh--cCCCeEEEEeccccchhhhccccc
Confidence 6899999999999999999999873211 113455554321 111111 1111 245788999999999999999999
Q ss_pred ccEEeecCCCC
Q 012947 89 TKLLLNCVGPY 99 (452)
Q Consensus 89 ~dvVIn~aGp~ 99 (452)
.|+|+|+|+..
T Consensus 77 ~d~vi~~a~~~ 87 (322)
T d1r6da_ 77 VDAIVHFAAES 87 (322)
T ss_dssp CCEEEECCSCC
T ss_pred cceEEeecccc
Confidence 99999999753
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=98.52 E-value=3.2e-08 Score=91.31 Aligned_cols=72 Identities=14% Similarity=0.060 Sum_probs=52.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH----
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC---- 86 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~---- 86 (452)
-+|+||||+++||+++++.|+++| ++|++++|++++.. .....+.+|+++.+......
T Consensus 3 gkVlITGas~GIG~aia~~l~~~G-------~~V~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~ 64 (235)
T d1ooea_ 3 GKVIVYGGKGALGSAILEFFKKNG-------YTVLNIDLSANDQA-----------DSNILVDGNKNWTEQEQSILEQTA 64 (235)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTT-------EEEEEEESSCCTTS-----------SEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEECCchhcc-----------cccceeccccCchhHHHHHHHHHH
Confidence 379999999999999999999999 89999999875421 11233345555544433222
Q ss_pred -----cCccEEeecCCCCC
Q 012947 87 -----SQTKLLLNCVGPYR 100 (452)
Q Consensus 87 -----~~~dvVIn~aGp~~ 100 (452)
.+.|+||||||.+.
T Consensus 65 ~~~~~g~iD~linnAG~~~ 83 (235)
T d1ooea_ 65 SSLQGSQVDGVFCVAGGWA 83 (235)
T ss_dssp HHHTTCCEEEEEECCCCCC
T ss_pred HHhcCCCeeEEEECCcccc
Confidence 24799999999643
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=98.51 E-value=7.1e-08 Score=89.87 Aligned_cols=62 Identities=15% Similarity=0.291 Sum_probs=53.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
.|+|+|+|||||+|++++++|.++| ++|+..+|+. +|+.|.++++++++
T Consensus 1 ~MKIlItGasGfiG~~l~~~L~~~g-------~~Vi~~~r~~----------------------~D~~d~~~~~~~l~~~ 51 (281)
T d1vl0a_ 1 HMKILITGANGQLGREIQKQLKGKN-------VEVIPTDVQD----------------------LDITNVLAVNKFFNEK 51 (281)
T ss_dssp CEEEEEESTTSHHHHHHHHHHTTSS-------EEEEEECTTT----------------------CCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC-------CEEEEeechh----------------------ccCCCHHHHHHHHHHc
Confidence 3789999999999999999999988 8998887732 37889999999987
Q ss_pred CccEEeecCCCCC
Q 012947 88 QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ~~dvVIn~aGp~~ 100 (452)
+.|+|||+++...
T Consensus 52 ~~d~vih~a~~~~ 64 (281)
T d1vl0a_ 52 KPNVVINCAAHTA 64 (281)
T ss_dssp CCSEEEECCCCCC
T ss_pred CCCEEEeeccccc
Confidence 6799999998643
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=98.46 E-value=4.9e-07 Score=84.21 Aligned_cols=80 Identities=18% Similarity=0.187 Sum_probs=63.9
Q ss_pred CCCeEEEEcCCc--hHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHH-HHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 012947 9 ELFDVIILGASG--FTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQ-ALQWASPSHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 9 ~~~~ilV~GATG--~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~-l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
+..++|||||+| +||+++++.|+++| ++|++.+|+.+++.+ +.+++ ..+...+.+|+.++++++++
T Consensus 5 ~gK~~lItGaag~~GIG~aiA~~la~~G-------a~Vil~~~~~~~~~~~~~~~~----~~~~~~~~~dv~~~~~~~~~ 73 (268)
T d2h7ma1 5 DGKRILVSGIITDSSIAFHIARVAQEQG-------AQLVLTGFDRLRLIQRITDRL----PAKAPLLELDVQNEEHLASL 73 (268)
T ss_dssp TTCEEEECCCSSTTCHHHHHHHHHHHTT-------CEEEEEECSCHHHHHHHHTTS----SSCCCEEECCTTCHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHcC-------CEEEEEeCChHHHHHHHHHHc----CCceeeEeeecccccccccc
Confidence 346899999654 69999999999999 899999999888744 44443 35678899999999777665
Q ss_pred Hc----------CccEEeecCCCC
Q 012947 86 CS----------QTKLLLNCVGPY 99 (452)
Q Consensus 86 ~~----------~~dvVIn~aGp~ 99 (452)
++ ..|++|||+|..
T Consensus 74 ~~~v~~~~~~~~~ld~~i~~ag~~ 97 (268)
T d2h7ma1 74 AGRVTEAIGAGNKLDGVVHSIGFM 97 (268)
T ss_dssp HHHHHHHHCTTCCEEEEEECCCCC
T ss_pred cchhhhccccCCCcceeeeccccc
Confidence 44 369999999854
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.45 E-value=2.1e-07 Score=86.18 Aligned_cols=79 Identities=14% Similarity=0.098 Sum_probs=66.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
+...+|||||+++||+.+++.|+++| ++|++.+|+.++++++.++++ .+.....+|+.+.+.+++...
T Consensus 4 kGKvalITGas~GIG~aia~~la~~G-------~~V~~~~r~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~~~~~~~ 72 (248)
T d2o23a1 4 KGLVAVITGGASGLGLATAERLVGQG-------ASAVLLDLPNSGGEAQAKKLG----NNCVFAPADVTSEKDVQTALAL 72 (248)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEECTTSSHHHHHHHHC----TTEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEeCChHHHHHHHHHhC----CCcccccccccccccccccccc
Confidence 45679999999999999999999999 899999999999999999884 467788899999877766554
Q ss_pred ------CccEEeecCCC
Q 012947 88 ------QTKLLLNCVGP 98 (452)
Q Consensus 88 ------~~dvVIn~aGp 98 (452)
..|.++++++.
T Consensus 73 ~~~~~~~~~~~~~~~~~ 89 (248)
T d2o23a1 73 AKGKFGRVDVAVNCAGI 89 (248)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred ccccccccccccccccc
Confidence 46787777653
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=98.41 E-value=2.9e-07 Score=86.26 Aligned_cols=79 Identities=14% Similarity=0.075 Sum_probs=63.8
Q ss_pred CCeEEEEcCCc--hHHHHHHHHHHHcCCCCCCCceEEEEEecChhH---HHHHHHHhCCCCCCCccEEEEeCCCHHHHHH
Q 012947 10 LFDVIILGASG--FTGKYVVREALKLFNFPSSPIKSLALAGRNPTR---VKQALQWASPSHSLSIPILTADTTDPPSLHR 84 (452)
Q Consensus 10 ~~~ilV~GATG--~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~k---l~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~ 84 (452)
...+|||||+| +||+++|+.|+++| ++|++++|+++. ++++.++ .....+..+|+++++++++
T Consensus 5 gK~alITGaag~~GIG~AiA~~la~~G-------a~V~i~~r~~~~~~~~~~l~~~-----~~~~~~~~~d~~~~~~~~~ 72 (274)
T d2pd4a1 5 GKKGLIVGVANNKSIAYGIAQSCFNQG-------ATLAFTYLNESLEKRVRPIAQE-----LNSPYVYELDVSKEEHFKS 72 (274)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHTTT-------CEEEEEESSTTTHHHHHHHHHH-----TTCCCEEECCTTCHHHHHH
T ss_pred CCEEEEECCCCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHhh-----CCceeEeeecccchhhHHH
Confidence 46899999887 79999999999999 899999998643 3333332 3466788999999999888
Q ss_pred HHc-------CccEEeecCCCCC
Q 012947 85 LCS-------QTKLLLNCVGPYR 100 (452)
Q Consensus 85 ~~~-------~~dvVIn~aGp~~ 100 (452)
+++ ..|++|||+|.+.
T Consensus 73 ~~~~~~~~~g~id~lV~nag~~~ 95 (274)
T d2pd4a1 73 LYNSVKKDLGSLDFIVHSVAFAP 95 (274)
T ss_dssp HHHHHHHHTSCEEEEEECCCCCC
T ss_pred HHHHHHHHcCCCCeEEeeccccc
Confidence 775 5799999999654
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=98.39 E-value=2e-07 Score=87.68 Aligned_cols=81 Identities=12% Similarity=0.039 Sum_probs=59.5
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec-ChhHHHHHHHHhCCCCCCC-----------------ccEEEE
Q 012947 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLS-----------------IPILTA 74 (452)
Q Consensus 13 ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR-~~~kl~~l~~~l~~~~~~~-----------------v~~v~~ 74 (452)
+|||||+++||+.+++.|+++| ++|++.+| +.++++++.+++....... .....+
T Consensus 5 AlITGas~GIG~aiA~~la~~G-------a~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 77 (284)
T d1e7wa_ 5 ALVTGAAKRLGRSIAEGLHAEG-------YAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSA 77 (284)
T ss_dssp EEETTCSSHHHHHHHHHHHHTT-------CEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CC
T ss_pred EEEeCCCCHHHHHHHHHHHHcC-------CEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccc
Confidence 7999999999999999999999 89998766 5666666666553101112 223456
Q ss_pred eCCCHHHHHHHHc-------CccEEeecCCCCC
Q 012947 75 DTTDPPSLHRLCS-------QTKLLLNCVGPYR 100 (452)
Q Consensus 75 Dl~d~~sl~~~~~-------~~dvVIn~aGp~~ 100 (452)
|+++.++++++++ +.|++|||||...
T Consensus 78 dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~ 110 (284)
T d1e7wa_ 78 PVTLFTRCAELVAACYTHWGRCDVLVNNASSFY 110 (284)
T ss_dssp CBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred cCCCHHHHHHHHHHHHHHhCCCCEEEecCCccC
Confidence 7888988888775 6899999999654
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.38 E-value=1.6e-07 Score=86.61 Aligned_cols=71 Identities=13% Similarity=0.093 Sum_probs=51.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
.+|||+||+++||+.+++.|+++| ++|++++|++.+.. .....+.+|.++.++.+.+.+
T Consensus 3 K~vlITGas~GIG~a~a~~l~~~G-------~~V~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~ 64 (236)
T d1dhra_ 3 RRVLVYGGRGALGSRCVQAFRARN-------WWVASIDVVENEEA-----------SASVIVKMTDSFTEQADQVTAEVG 64 (236)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT-------CEEEEEESSCCTTS-----------SEEEECCCCSCHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEeCCccccc-----------cccceeecccCcHHHHHHHHHHHH
Confidence 589999999999999999999998 89999998765421 122333455555544443322
Q ss_pred ------CccEEeecCCCC
Q 012947 88 ------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (452)
+.|+||||||.+
T Consensus 65 ~~~~~~~iD~lInnAG~~ 82 (236)
T d1dhra_ 65 KLLGDQKVDAILCVAGGW 82 (236)
T ss_dssp HHHTTCCEEEEEECCCCC
T ss_pred HHhCCCCceEEEECCccc
Confidence 479999999954
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=98.35 E-value=3.7e-07 Score=86.74 Aligned_cols=61 Identities=13% Similarity=0.142 Sum_probs=48.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--C
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--Q 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--~ 88 (452)
.+|+|||||||+|++++++|++.+ +.+++..+ .. .+|+.|.+.+.++++ +
T Consensus 3 kkIlITG~tGfiG~~l~~~L~~~g-------~~vi~~~~-~~--------------------~~~~~~~~~~~~~~~~~~ 54 (315)
T d1e6ua_ 3 QRVFIAGHRGMVGSAIRRQLEQRG-------DVELVLRT-RD--------------------ELNLLDSRAVHDFFASER 54 (315)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCT-------TEEEECCC-TT--------------------TCCTTCHHHHHHHHHHHC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCc-------CEEEEecC-ch--------------------hccccCHHHHHHHHhhcC
Confidence 489999999999999999999988 55555432 11 147888999988876 5
Q ss_pred ccEEeecCCCC
Q 012947 89 TKLLLNCVGPY 99 (452)
Q Consensus 89 ~dvVIn~aGp~ 99 (452)
.|+|+|+++..
T Consensus 55 ~d~v~~~a~~~ 65 (315)
T d1e6ua_ 55 IDQVYLAAAKV 65 (315)
T ss_dssp CSEEEECCCCC
T ss_pred CCEEEEcchhc
Confidence 89999998754
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.35 E-value=1.7e-07 Score=84.37 Aligned_cols=70 Identities=19% Similarity=0.270 Sum_probs=48.1
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH-cCc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC-SQT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~-~~~ 89 (452)
.+|+|+|||||+|++++++|++++. ..+|.+..|+... ....+..+..|..++...+ ..+
T Consensus 3 KkIlItGatG~iG~~lv~~L~~~~~-----~~~v~~~~r~~~~--------------~~~~~~~~~~d~~~~~~~~~~~~ 63 (212)
T d2a35a1 3 KRVLLAGATGLTGEHLLDRILSEPT-----LAKVIAPARKALA--------------EHPRLDNPVGPLAELLPQLDGSI 63 (212)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHCTT-----CCEEECCBSSCCC--------------CCTTEECCBSCHHHHGGGCCSCC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCC-----eEEEEEEeCCchh--------------hcccccccccchhhhhhccccch
Confidence 5899999999999999999999982 1367777775321 1122344455555544443 358
Q ss_pred cEEeecCCCC
Q 012947 90 KLLLNCVGPY 99 (452)
Q Consensus 90 dvVIn~aGp~ 99 (452)
|+||||+|..
T Consensus 64 d~vi~~~g~~ 73 (212)
T d2a35a1 64 DTAFCCLGTT 73 (212)
T ss_dssp SEEEECCCCC
T ss_pred heeeeeeeee
Confidence 9999999854
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=98.32 E-value=3.6e-07 Score=84.89 Aligned_cols=83 Identities=11% Similarity=0.089 Sum_probs=59.3
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhH-HHHHHHHhCCCCCCCccEEEEeCCC----HHHHHHHH
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR-VKQALQWASPSHSLSIPILTADTTD----PPSLHRLC 86 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~k-l~~l~~~l~~~~~~~v~~v~~Dl~d----~~sl~~~~ 86 (452)
..|||||+++||+.+++.|+++| ++|++.+|+.++ .+++.+++..........+..|+.+ ++.+.+++
T Consensus 3 vAlVTGas~GIG~aia~~la~~G-------~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (266)
T d1mxha_ 3 AAVITGGARRIGHSIAVRLHQQG-------FRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDII 75 (266)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTT-------CEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHH
Confidence 47999999999999999999999 899999998655 4555555532123345555555543 34444443
Q ss_pred c-------CccEEeecCCCCCC
Q 012947 87 S-------QTKLLLNCVGPYRL 101 (452)
Q Consensus 87 ~-------~~dvVIn~aGp~~~ 101 (452)
+ +.|++|||||....
T Consensus 76 ~~~~~~~g~iDilvnnAG~~~~ 97 (266)
T d1mxha_ 76 DCSFRAFGRCDVLVNNASAYYP 97 (266)
T ss_dssp HHHHHHHSCCCEEEECCCCCCC
T ss_pred HHHHHHhCCCCEEEECCccCCC
Confidence 3 68999999996543
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=98.32 E-value=1.2e-07 Score=88.25 Aligned_cols=81 Identities=12% Similarity=0.109 Sum_probs=63.5
Q ss_pred CCeEEEEcCCc--hHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 10 LFDVIILGASG--FTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 10 ~~~ilV~GATG--~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
...++||||+| +||+.+++.|+++| ++|++.+|+++..+.+.+... .......+..|+.+..++.+.++
T Consensus 5 gK~~lITGass~~GIG~aiA~~l~~~G-------~~V~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 75 (258)
T d1qsga_ 5 GKRILVTGVASKLSIAYGIAQAMHREG-------AELAFTYQNDKLKGRVEEFAA--QLGSDIVLQCDVAEDASIDTMFA 75 (258)
T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHHTT-------CEEEEEESSTTTHHHHHHHHH--HTTCCCEEECCTTCHHHHHHHHH
T ss_pred CCEEEEECCCCchhHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHHh--hcCCcceeecccchHHHHHHHHH
Confidence 46899999998 79999999999999 899999999765544433222 13466788889999888877765
Q ss_pred -------CccEEeecCCCC
Q 012947 88 -------QTKLLLNCVGPY 99 (452)
Q Consensus 88 -------~~dvVIn~aGp~ 99 (452)
..|++||+++..
T Consensus 76 ~~~~~~~~~d~~v~~a~~~ 94 (258)
T d1qsga_ 76 ELGKVWPKFDGFVHSIGFA 94 (258)
T ss_dssp HHHTTCSSEEEEEECCCCC
T ss_pred HhhhcccccceEEEeeccc
Confidence 468999999764
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.16 E-value=4.4e-06 Score=69.53 Aligned_cols=73 Identities=16% Similarity=0.209 Sum_probs=64.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-HcCc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~-~~~~ 89 (452)
|+|+|+|+ |.+|+.+++.|.+.+ ++|.++++++++.+++.+++ +..++.+|.+|++.++++ ++++
T Consensus 1 M~IvI~G~-G~~G~~la~~L~~~g-------~~v~vid~d~~~~~~~~~~~------~~~vi~Gd~~~~~~l~~~~i~~a 66 (132)
T d1lssa_ 1 MYIIIAGI-GRVGYTLAKSLSEKG-------HDIVLIDIDKDICKKASAEI------DALVINGDCTKIKTLEDAGIEDA 66 (132)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHC------SSEEEESCTTSHHHHHHTTTTTC
T ss_pred CEEEEECC-CHHHHHHHHHHHHCC-------CCcceecCChhhhhhhhhhh------hhhhccCcccchhhhhhcChhhh
Confidence 58999998 999999999999998 89999999999998887654 467899999999999988 6889
Q ss_pred cEEeecCC
Q 012947 90 KLLLNCVG 97 (452)
Q Consensus 90 dvVIn~aG 97 (452)
|.++.+..
T Consensus 67 ~~vv~~t~ 74 (132)
T d1lssa_ 67 DMYIAVTG 74 (132)
T ss_dssp SEEEECCS
T ss_pred hhhcccCC
Confidence 99998753
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=98.12 E-value=2.2e-07 Score=88.08 Aligned_cols=39 Identities=13% Similarity=-0.024 Sum_probs=34.1
Q ss_pred CCCeEEEEcCCc--hHHHHHHHHHHHcCCCCCCCceEEEEEecChhHH
Q 012947 9 ELFDVIILGASG--FTGKYVVREALKLFNFPSSPIKSLALAGRNPTRV 54 (452)
Q Consensus 9 ~~~~ilV~GATG--~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl 54 (452)
+...+|||||+| +||+.+++.|+++| ++|++.+|+....
T Consensus 7 ~gK~alVTGass~~GIG~aiA~~la~~G-------a~Vvi~~~~~~~~ 47 (297)
T d1d7oa_ 7 RGKRAFIAGIADDNGYGWAVAKSLAAAG-------AEILVGTWVPALN 47 (297)
T ss_dssp TTCEEEEECCSSSSSHHHHHHHHHHHTT-------CEEEEEEEHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCC-------CEEEEEeCchhhh
Confidence 356899999987 89999999999999 8999999987544
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=98.02 E-value=2.3e-05 Score=67.45 Aligned_cols=85 Identities=13% Similarity=0.090 Sum_probs=64.2
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
...+|+|+|+ |-+|+.++++|...+. .++.++.|+.++.+++.++++. .. .+-+++.+.+.+
T Consensus 23 ~~~~ilviGa-G~~g~~v~~~L~~~g~------~~i~v~nRt~~ka~~l~~~~~~------~~-----~~~~~~~~~l~~ 84 (159)
T d1gpja2 23 HDKTVLVVGA-GEMGKTVAKSLVDRGV------RAVLVANRTYERAVELARDLGG------EA-----VRFDELVDHLAR 84 (159)
T ss_dssp TTCEEEEESC-CHHHHHHHHHHHHHCC------SEEEEECSSHHHHHHHHHHHTC------EE-----CCGGGHHHHHHT
T ss_pred ccCeEEEECC-CHHHHHHHHHHHhcCC------cEEEEEcCcHHHHHHHHHhhhc------cc-----ccchhHHHHhcc
Confidence 4568999998 9999999999999983 4799999999999999988741 11 234578889999
Q ss_pred ccEEeecCCCC-CCCCHHHHHHHH
Q 012947 89 TKLLLNCVGPY-RLHGDPVAAACV 111 (452)
Q Consensus 89 ~dvVIn~aGp~-~~~~~~vv~ac~ 111 (452)
+|+||+|.+.. ...+...++...
T Consensus 85 ~Divi~atss~~~ii~~~~i~~~~ 108 (159)
T d1gpja2 85 SDVVVSATAAPHPVIHVDDVREAL 108 (159)
T ss_dssp CSEEEECCSSSSCCBCHHHHHHHH
T ss_pred CCEEEEecCCCCccccHhhhHHHH
Confidence 99999998732 223344444333
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=98.00 E-value=3.1e-06 Score=74.69 Aligned_cols=138 Identities=14% Similarity=0.143 Sum_probs=92.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHH---HHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQ---ALQWASPSHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~---l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
+..+|+|+|+ |++|+.++..|.+.+. .++.++.|+.+++++ +.+++.. .........|+.+.+.+...
T Consensus 17 ~~k~vlIlGa-GGaarai~~al~~~g~------~~i~i~nR~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~ 87 (182)
T d1vi2a1 17 KGKTMVLLGA-GGASTAIGAQGAIEGL------KEIKLFNRRDEFFDKALAFAQRVNE--NTDCVVTVTDLADQQAFAEA 87 (182)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTC------SEEEEEECSSTTHHHHHHHHHHHHH--HSSCEEEEEETTCHHHHHHH
T ss_pred CCCEEEEECC-cHHHHHHHHHHhhcCC------ceEeeeccchHHHHHHHHHHHHHHh--hcCcceEeeecccccchhhh
Confidence 3468999998 7789999999999984 589999998765544 3444421 12345667899999999999
Q ss_pred HcCccEEeecCCC--CCCCCHHH-H-HHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHH
Q 012947 86 CSQTKLLLNCVGP--YRLHGDPV-A-AACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVM 161 (452)
Q Consensus 86 ~~~~dvVIn~aGp--~~~~~~~v-v-~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~ 161 (452)
+..+|+||||... .....+.+ . ......+...+|+...+.-+.- -..|++.|..++++. +|..+
T Consensus 88 ~~~~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~~~v~Di~Y~p~~T~l-----l~~a~~~g~~~i~Gl-------~Mli~ 155 (182)
T d1vi2a1 88 LASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNPHMTKL-----LQQAQQAGCKTIDGY-------GMLLW 155 (182)
T ss_dssp HHTCSEEEECSSTTSTTSCSCCSCCCGGGSCTTCEEEECCCSSSSCHH-----HHHHHTTTCEEECHH-------HHHHH
T ss_pred hcccceeccccCCccccccchhhhhHHHhhhcchhhHHhhcCccccHH-----HHHHHHCcCeEeccH-------HHHHH
Confidence 9999999999643 21111111 1 1234456678999876543322 245778888887653 46666
Q ss_pred HHhhhc
Q 012947 162 FNSRQW 167 (452)
Q Consensus 162 ~~~~~~ 167 (452)
-+..++
T Consensus 156 Qa~~~f 161 (182)
T d1vi2a1 156 QGAEQF 161 (182)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555544
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=97.97 E-value=2.9e-05 Score=66.45 Aligned_cols=142 Identities=12% Similarity=-0.003 Sum_probs=82.2
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCc--eEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH
Q 012947 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPI--KSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHR 84 (452)
Q Consensus 7 ~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~--~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~ 84 (452)
|+++++|.|+||+|.+|+.++-.|+...--+.... .++....++.++++.+..++..........+... ....+
T Consensus 1 m~~p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 76 (154)
T d1y7ta1 1 MKAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEAT----DDPKV 76 (154)
T ss_dssp CCCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE----SCHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccC----Cchhh
Confidence 45788999999999999999999987652110000 2344456777787777665532111223333332 22457
Q ss_pred HHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHh
Q 012947 85 LCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNS 164 (452)
Q Consensus 85 ~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~ 164 (452)
.++++|+||.++|.....++.-.+.... ....++.......+.+......++- +-|-|..++.+.
T Consensus 77 ~~~~advViitaG~~~~pg~~r~dl~~~----------N~~i~~~~~~~i~k~a~~~~~vivv-----sNPvDv~t~~a~ 141 (154)
T d1y7ta1 77 AFKDADYALLVGAAPRKAGMERRDLLQV----------NGKIFTEQGRALAEVAKKDVKVLVV-----GNPANTNALIAY 141 (154)
T ss_dssp HTTTCSEEEECCCCCCCTTCCHHHHHHH----------HHHHHHHHHHHHHHHSCTTCEEEEC-----SSSHHHHHHHHH
T ss_pred hcccccEEEeecCcCCCCCCcHHHHHHH----------HHHHHHHHHHHHHHhCCCCcEEEEe-----cCcHHHHHHHHH
Confidence 7899999999999765554322222111 1223344444333333333333332 358899999887
Q ss_pred hhc
Q 012947 165 RQW 167 (452)
Q Consensus 165 ~~~ 167 (452)
|+.
T Consensus 142 k~a 144 (154)
T d1y7ta1 142 KNA 144 (154)
T ss_dssp HTC
T ss_pred HHc
Confidence 654
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=97.83 E-value=4.8e-05 Score=64.51 Aligned_cols=132 Identities=14% Similarity=0.163 Sum_probs=77.3
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC--CCCCCccEEEEeCCCHHHHHH
Q 012947 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--SHSLSIPILTADTTDPPSLHR 84 (452)
Q Consensus 7 ~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~--~~~~~v~~v~~Dl~d~~sl~~ 84 (452)
|.+.++|.|+|+ |++|..++..|+..+-. .++.+.++++++++....++.. .......+...| .+
T Consensus 2 m~~~~KI~IIGa-G~VG~~~A~~l~~~~~~-----~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d---~~---- 68 (146)
T d1ez4a1 2 MPNHQKVVLVGD-GAVGSSYAFAMAQQGIA-----EEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGE---YS---- 68 (146)
T ss_dssp BTTBCEEEEECC-SHHHHHHHHHHHHHTCC-----SEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECC---GG----
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhcCCC-----cEEEEeecccchhHHHHHHHhccccccCCceEeecc---HH----
Confidence 345679999996 99999999999998731 4899999999888766655521 111223333333 22
Q ss_pred HHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecC-cHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHH
Q 012947 85 LCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISG-EPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFN 163 (452)
Q Consensus 85 ~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsg-e~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~ 163 (452)
.++++|+||.++|.....+. ...|+-. ....++.+.....+.+ -.++.|+- +-|.|+.++.+
T Consensus 69 ~~~~adivvitag~~~~~g~-----------~r~~l~~~N~~i~~~~~~~i~~~~-p~aivivv-----tNPvdv~t~~~ 131 (146)
T d1ez4a1 69 DCKDADLVVITAGAPQKPGE-----------SRLDLVNKNLNILSSIVKPVVDSG-FDGIFLVA-----ANPVDILTYAT 131 (146)
T ss_dssp GGTTCSEEEECCCC---------------------CHHHHHHHHHHHHHHHHHTT-CCSEEEEC-----SSSHHHHHHHH
T ss_pred HhccccEEEEecccccCCCC-----------CHHHHHHHHHHHHHHHHHHHhhcC-CCcEEEEe-----CCccHHHHHHH
Confidence 36899999999986543331 1112111 1233334333333222 12344442 36889999988
Q ss_pred hhhcC
Q 012947 164 SRQWI 168 (452)
Q Consensus 164 ~~~~~ 168 (452)
.+...
T Consensus 132 ~k~sg 136 (146)
T d1ez4a1 132 WKFSG 136 (146)
T ss_dssp HHHHC
T ss_pred HHHHC
Confidence 77653
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=97.80 E-value=4.2e-05 Score=66.21 Aligned_cols=125 Identities=17% Similarity=0.091 Sum_probs=82.5
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
+..+|+|+|+ |+++++++..|.+.+. -++.++.|+.++.+.+.+.+.. .. .+-.+ ..+
T Consensus 16 ~~~~vlIlGa-GGaarai~~aL~~~g~------~~I~I~nR~~~ka~~L~~~~~~------~~--~~~~~-------~~~ 73 (167)
T d1npya1 16 KNAKVIVHGS-GGMAKAVVAAFKNSGF------EKLKIYARNVKTGQYLAALYGY------AY--INSLE-------NQQ 73 (167)
T ss_dssp TTSCEEEECS-STTHHHHHHHHHHTTC------CCEEEECSCHHHHHHHHHHHTC------EE--ESCCT-------TCC
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCC------CEEEEecccHHHHHHHHHhhhh------hh--hhccc-------ccc
Confidence 4568999998 7889999999999983 4789999999999998887631 11 11111 146
Q ss_pred ccEEeecCCCCCC--C---CHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHH
Q 012947 89 TKLLLNCVGPYRL--H---GDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFN 163 (452)
Q Consensus 89 ~dvVIn~aGp~~~--~---~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~ 163 (452)
+|+||||...... . ..++-........-.+|+...+.-+.- -..|++.|..++++. +|..+-+
T Consensus 74 ~DliINaTpiGm~~~~~~~~l~~~~~~~~~~~~v~D~vY~P~~T~l-----l~~A~~~G~~~i~Gl-------~Mli~Qa 141 (167)
T d1npya1 74 ADILVNVTSIGMKGGKEEMDLAFPKAFIDNASVAFDVVAMPVETPF-----IRYAQARGKQTISGA-------AVIVLQA 141 (167)
T ss_dssp CSEEEECSSTTCTTSTTTTSCSSCHHHHHHCSEEEECCCSSSSCHH-----HHHHHHTTCEEECHH-------HHHHHHH
T ss_pred hhhheeccccCCccccccccccccHhhcCCcceEEEEeeccCCCHH-----HHHHHHCCCeEEECH-------HHHHHHH
Confidence 8999998642211 1 112334455667778999876543322 245778888877542 4566655
Q ss_pred hhhc
Q 012947 164 SRQW 167 (452)
Q Consensus 164 ~~~~ 167 (452)
..++
T Consensus 142 ~~~f 145 (167)
T d1npya1 142 VEQF 145 (167)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5554
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=97.76 E-value=5.1e-05 Score=65.76 Aligned_cols=119 Identities=18% Similarity=0.218 Sum_probs=81.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEE-EEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v-~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
+++|.|+|. |.+|+..++.|.+... +++ .+++|+.++.+ ...... . .++..+..+
T Consensus 3 kirvgiiG~-G~ig~~~~~~l~~~~~------~elvav~~~~~~~~~------------~~~~~~--~---~~~~~~~~~ 58 (170)
T d1f06a1 3 NIRVAIVGY-GNLGRSVEKLIAKQPD------MDLVGIFSRRATLDT------------KTPVFD--V---ADVDKHADD 58 (170)
T ss_dssp CEEEEEECC-SHHHHHHHHHHTTCSS------EEEEEEEESSSCCSS------------SSCEEE--G---GGGGGTTTT
T ss_pred cceEEEECC-hHHHHHHHHHHHhCCC------cEEEEEEeccccccc------------cccccc--c---hhhhhhccc
Confidence 578999995 9999999999887542 554 56777754321 112221 1 234445678
Q ss_pred ccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcc
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSI 154 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~ 154 (452)
+|+|+.|.++... ..++..|+++|.|.|+......-..+....+++.|+++|..++-+.|+++.
T Consensus 59 ~D~Vvi~tp~~~h--~~~a~~aL~aG~~vv~~~~~~~~~~~~~~~l~~~A~~~~~~~~i~~g~~~~ 122 (170)
T d1f06a1 59 VDVLFLCMGSATD--IPEQAPKFAQFACTVDTYDNHRDIPRHRQVMNEAATAAGNVALVSTGRNPD 122 (170)
T ss_dssp CSEEEECSCTTTH--HHHHHHHHTTTSEEECCCCCGGGHHHHHHHHHHHHHHHTCEEECSCSCHHH
T ss_pred cceEEEeCCCccc--HHHHHHHHHCCCcEEEecCccccCHHHHHHHHHHHHhcCceEEEeceeccc
Confidence 9999998865432 689999999999998765544444444466788899888887777777543
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=97.67 E-value=2.7e-05 Score=71.40 Aligned_cols=64 Identities=14% Similarity=0.058 Sum_probs=49.2
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH-----
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC----- 86 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~----- 86 (452)
-||||||+++||+++++.|+++| ++|++++|+.+++ .+|+.+.+..+...
T Consensus 3 VvlITGas~GIG~aiA~~la~~G-------a~V~~~~~~~~~~------------------~~d~~~~~~~~~~~~~~~~ 57 (257)
T d1fjha_ 3 IIVISGCATGIGAATRKVLEAAG-------HQIVGIDIRDAEV------------------IADLSTAEGRKQAIADVLA 57 (257)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-------CEEEEEESSSSSE------------------ECCTTSHHHHHHHHHHHHT
T ss_pred EEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECChHHH------------------HHHhcCHHHHHHHHHHHHH
Confidence 47999999999999999999999 8999999975421 34666665554432
Q ss_pred ---cCccEEeecCCCCC
Q 012947 87 ---SQTKLLLNCVGPYR 100 (452)
Q Consensus 87 ---~~~dvVIn~aGp~~ 100 (452)
...|++|||||...
T Consensus 58 ~~~~~id~lv~~Ag~~~ 74 (257)
T d1fjha_ 58 KCSKGMDGLVLCAGLGP 74 (257)
T ss_dssp TCTTCCSEEEECCCCCT
T ss_pred HhCCCCcEEEEcCCCCC
Confidence 24799999998543
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.67 E-value=2.8e-05 Score=67.14 Aligned_cols=45 Identities=18% Similarity=0.224 Sum_probs=41.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhC
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWAS 62 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~ 62 (452)
|+|.|+||+|.+|+.+++.|++.| ++|.+.+|++++++++.+++.
T Consensus 1 Mki~vigGaG~iG~alA~~la~~G-------~~V~l~~R~~e~~~~l~~~i~ 45 (212)
T d1jaya_ 1 MRVALLGGTGNLGKGLALRLATLG-------HEIVVGSRREEKAEAKAAEYR 45 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT-------CEEEEEESSHHHHHHHHHHHH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHH
Confidence 589999999999999999999999 899999999999999888764
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=97.67 E-value=0.00012 Score=60.41 Aligned_cols=71 Identities=17% Similarity=0.269 Sum_probs=60.4
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-HcCcc
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQTK 90 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~-~~~~d 90 (452)
+++|+|+ |-+|+.+++.|.+.| +++.+++.++++++++.+ .....+.+|.+|++.+.++ ++++|
T Consensus 2 ~~iIiG~-G~~G~~la~~L~~~g-------~~vvvid~d~~~~~~~~~-------~~~~~~~gd~~~~~~l~~a~i~~a~ 66 (134)
T d2hmva1 2 QFAVIGL-GRFGGSIVKELHRMG-------HEVLAVDINEEKVNAYAS-------YATHAVIANATEENELLSLGIRNFE 66 (134)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTT-------CCCEEEESCHHHHHHTTT-------TCSEEEECCTTCTTHHHHHTGGGCS
T ss_pred EEEEECC-CHHHHHHHHHHHHCC-------CeEEEecCcHHHHHHHHH-------hCCcceeeecccchhhhccCCcccc
Confidence 5788887 899999999999998 789999999999877643 2346788999999999887 78999
Q ss_pred EEeecCC
Q 012947 91 LLLNCVG 97 (452)
Q Consensus 91 vVIn~aG 97 (452)
.||-+.+
T Consensus 67 ~vi~~~~ 73 (134)
T d2hmva1 67 YVIVAIG 73 (134)
T ss_dssp EEEECCC
T ss_pred EEEEEcC
Confidence 9887764
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=97.66 E-value=2.1e-05 Score=73.03 Aligned_cols=30 Identities=20% Similarity=0.390 Sum_probs=26.0
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEe
Q 012947 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAG 48 (452)
Q Consensus 13 ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iag 48 (452)
|||||||||+|++++++|+++|. .+|++.+
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~------~~V~~~d 31 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGI------TDILVVD 31 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTC------CCEEEEE
T ss_pred EEEecCccHHHHHHHHHHHhCCC------CeEEEEE
Confidence 89999999999999999999982 3677765
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=97.63 E-value=4.6e-05 Score=69.01 Aligned_cols=67 Identities=9% Similarity=0.071 Sum_probs=52.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..+|||||+++||+.+++.|+++| ++|++++|++++. +...+.+|+.+......+..
T Consensus 2 K~alITGas~GIG~aiA~~la~~G-------a~V~i~~~~~~~~-------------~~~~~~~d~~~~~~~~~~~~~~~ 61 (241)
T d1uaya_ 2 RSALVTGGASGLGRAAALALKARG-------YRVVVLDLRREGE-------------DLIYVEGDVTREEDVRRAVARAQ 61 (241)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHT-------CEEEEEESSCCSS-------------SSEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCcccc-------------cceEeeccccchhhhHHHHHhhh
Confidence 479999999999999999999999 8999999986532 45677899998877766654
Q ss_pred ---CccEEeecCC
Q 012947 88 ---QTKLLLNCVG 97 (452)
Q Consensus 88 ---~~dvVIn~aG 97 (452)
..+.++++++
T Consensus 62 ~~~~~~~~~~~~~ 74 (241)
T d1uaya_ 62 EEAPLFAVVSAAG 74 (241)
T ss_dssp HHSCEEEEEECCC
T ss_pred ccccccchhhhhh
Confidence 3345555544
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=97.63 E-value=0.00028 Score=60.86 Aligned_cols=129 Identities=13% Similarity=0.132 Sum_probs=79.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+|+|+|| |+++++++-.|.+.+ .++.++.|+.++.+++.+.+.. ...+...+..+. ...++
T Consensus 18 ~k~vlIlGa-GGaarai~~al~~~g-------~~i~I~nRt~~ka~~l~~~~~~----~~~~~~~~~~~~-----~~~~~ 80 (170)
T d1nyta1 18 GLRILLIGA-GGASRGVLLPLLSLD-------CAVTITNRTVSRAEELAKLFAH----TGSIQALSMDEL-----EGHEF 80 (170)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTT-------CEEEEECSSHHHHHHHHHHTGG----GSSEEECCSGGG-----TTCCC
T ss_pred CCEEEEECC-cHHHHHHHHHhcccc-------eEEEeccchHHHHHHHHHHHhh----cccccccccccc-----ccccc
Confidence 468999998 788999999999987 6899999999999999887741 122333333321 12578
Q ss_pred cEEeecCCCCCCCC-HHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccE-EEcCCCCCcchhhHHHHHHhhhc
Q 012947 90 KLLLNCVGPYRLHG-DPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSL-LVSACGFDSIPAELGVMFNSRQW 167 (452)
Q Consensus 90 dvVIn~aGp~~~~~-~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~-iv~~~G~~s~P~dl~~~~~~~~~ 167 (452)
|+||||........ .++-......+...+|+...+.-+..+ ..|++.|.. ++++. +|..+-+..++
T Consensus 81 dliIN~Tp~G~~~~~~~~~~~~~~~~~~v~D~vY~P~~T~ll-----~~A~~~G~~~~i~Gl-------~MLi~Qa~~~f 148 (170)
T d1nyta1 81 DLIINATSSGISGDIPAIPSSLIHPGIYCYDMFYQKGKTPFL-----AWCEQRGSKRNADGL-------GMLVAQAAHAF 148 (170)
T ss_dssp SEEEECCSCGGGTCCCCCCGGGCCTTCEEEESCCCSSCCHHH-----HHHHHTTCCEEECTH-------HHHHHHHHHHH
T ss_pred ceeecccccCcccCCCCCcHHHhccCcEEEEeecCCCCCHHH-----HHHHHcCCCcccCCH-------HHHHHHHHHHH
Confidence 99999974321110 111111233445678988765433222 456677763 44442 45666555544
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.59 E-value=0.0006 Score=57.54 Aligned_cols=132 Identities=17% Similarity=0.206 Sum_probs=80.6
Q ss_pred CCCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC---CCCCCccEEEEeCCCHHHH
Q 012947 6 QIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP---SHSLSIPILTADTTDPPSL 82 (452)
Q Consensus 6 ~~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~---~~~~~v~~v~~Dl~d~~sl 82 (452)
++.+..||.|+|| |.+|..++..|+..+-. -++.+.++++++++....++.. .....+.+... |.
T Consensus 2 ~~~~~~KI~IiGa-G~vG~~~a~~l~~~~l~-----~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~---d~--- 69 (148)
T d1ldna1 2 KNNGGARVVVIGA-GFVGASYVFALMNQGIA-----DEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHG---DY--- 69 (148)
T ss_dssp TTTTSCEEEEECC-SHHHHHHHHHHHHHTCC-----SEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEEC---CG---
T ss_pred CCCCCCeEEEECc-CHHHHHHHHHHHhcCCC-----ceEEEEeeccccccchhccHhhCccccCCCeEEEEC---CH---
Confidence 3445679999997 99999999999998731 3799999999987776666631 11123333332 32
Q ss_pred HHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEec-CcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHH
Q 012947 83 HRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS-GEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVM 161 (452)
Q Consensus 83 ~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDls-ge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~ 161 (452)
+.++++|+||.++|.....++. ..|+- .....++.+.+...+.+. .++.|+ -+-|-|+.++
T Consensus 70 -~~l~daDvvvitag~~~~~~~~-----------R~dl~~~N~~i~~~i~~~i~~~~p-~a~~iv-----vtNPvd~~t~ 131 (148)
T d1ldna1 70 -DDCRDADLVVICAGANQKPGET-----------RLDLVDKNIAIFRSIVESVMASGF-QGLFLV-----ATNPVDILTY 131 (148)
T ss_dssp -GGTTTCSEEEECCSCCCCTTTC-----------SGGGHHHHHHHHHHHHHHHHHHTC-CSEEEE-----CSSSHHHHHH
T ss_pred -HHhccceeEEEecccccccCcc-----------hhHHHHHHHHHHHHHHHHHHhhCC-CceEEE-----ecCccHHHHH
Confidence 3477899999999965543321 01110 012233343333332222 233443 2568899999
Q ss_pred HHhhhc
Q 012947 162 FNSRQW 167 (452)
Q Consensus 162 ~~~~~~ 167 (452)
.+.+.-
T Consensus 132 ~~~k~s 137 (148)
T d1ldna1 132 ATWKFS 137 (148)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888775
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.58 E-value=0.00038 Score=58.68 Aligned_cols=131 Identities=17% Similarity=0.178 Sum_probs=75.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh--hHHHHHHHHhCC---CCCCCccEEEEeCCCHHHHHHH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASP---SHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~--~kl~~l~~~l~~---~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
|||.|+||+|.+|+.++-.|+.++-. -++.+.++++ ++++.+..++.. ....++.+....-.|. +.
T Consensus 1 MKV~IiGA~G~VG~~~a~~l~~~~l~-----~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~----~~ 71 (145)
T d1hyea1 1 MKVTIIGASGRVGSATALLLAKEPFM-----KDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENL----RI 71 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTC-----CEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCG----GG
T ss_pred CEEEEECCCChHHHHHHHHHHhCCcc-----cccccccchhhhHhhhcccccchhcccccccCCccccCCcchH----HH
Confidence 58999999999999999999888731 3899999875 345544443321 1123344433322232 35
Q ss_pred HcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhh
Q 012947 86 CSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSR 165 (452)
Q Consensus 86 ~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~ 165 (452)
++++|+||-+||.....++.=.+.... ....++.+.+...+.+ .+. +++- +-|-|+++|.+.+
T Consensus 72 l~~aDvVVitAG~~~~~g~sR~dl~~~----------Na~iv~~i~~~i~~~~-~~~-iivV-----tNPvD~mt~~~~k 134 (145)
T d1hyea1 72 IDESDVVIITSGVPRKEGMSRMDLAKT----------NAKIVGKYAKKIAEIC-DTK-IFVI-----TNPVDVMTYKALV 134 (145)
T ss_dssp GTTCSEEEECCSCCCCTTCCHHHHHHH----------HHHHHHHHHHHHHHHC-CCE-EEEC-----SSSHHHHHHHHHH
T ss_pred hccceEEEEecccccCCCCChhhhhhh----------hHHHHHHHHHHHhccC-CCe-EEEE-----cCchHHHHHHHHH
Confidence 779999999999655544210111111 1222333333332222 123 3331 4688999998877
Q ss_pred hc
Q 012947 166 QW 167 (452)
Q Consensus 166 ~~ 167 (452)
..
T Consensus 135 ~s 136 (145)
T d1hyea1 135 DS 136 (145)
T ss_dssp HH
T ss_pred HH
Confidence 64
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.57 E-value=0.00016 Score=61.51 Aligned_cols=138 Identities=14% Similarity=0.025 Sum_probs=79.0
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC--hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 012947 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN--PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 8 ~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~--~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
+++++|.|+||+|.+|+.++-.|++...-.......+.+.+.+ .++++.+..++..........+..- ....+.
T Consensus 1 s~p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~ 76 (154)
T d5mdha1 1 SEPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIAT----DKEEIA 76 (154)
T ss_dssp CCCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEE----SCHHHH
T ss_pred CCceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccC----cccccc
Confidence 4688999999999999999999986542111112466776654 4555555443311011122222221 124577
Q ss_pred HcCccEEeecCCCCCCCCH---HHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHH
Q 012947 86 CSQTKLLLNCVGPYRLHGD---PVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMF 162 (452)
Q Consensus 86 ~~~~dvVIn~aGp~~~~~~---~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~ 162 (452)
++++|+||-++|.....++ .+++.. ...++.+.....+.+..+++.|+- +-|-|..+|.
T Consensus 77 ~~~~dvVVitag~~~~~g~sr~dll~~N-------------~~i~k~~~~~i~k~a~~~~~iivv-----sNPvD~mt~v 138 (154)
T d5mdha1 77 FKDLDVAILVGSMPRRDGMERKDLLKAN-------------VKIFKCQGAALDKYAKKSVKVIVV-----GNPANTNCLT 138 (154)
T ss_dssp TTTCSEEEECCSCCCCTTCCTTTTHHHH-------------HHHHHHHHHHHHHHSCTTCEEEEC-----SSSHHHHHHH
T ss_pred cCCceEEEEecccCCCCCCchhHHHHHh-------------HHHHHHHHHHHHhhCCCceEEEEe-----cCcHHHHHHH
Confidence 8899999999996554431 122211 223344444444444444544542 2488999998
Q ss_pred Hhhhc
Q 012947 163 NSRQW 167 (452)
Q Consensus 163 ~~~~~ 167 (452)
+.|.-
T Consensus 139 ~~k~s 143 (154)
T d5mdha1 139 ASKSA 143 (154)
T ss_dssp HHHTC
T ss_pred HHHHc
Confidence 87765
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=97.51 E-value=0.0013 Score=55.81 Aligned_cols=86 Identities=9% Similarity=0.020 Sum_probs=59.6
Q ss_pred CCCCCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC---CCCCCccEEEEeCCCHH
Q 012947 4 QSQIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP---SHSLSIPILTADTTDPP 80 (452)
Q Consensus 4 ~~~~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~---~~~~~v~~v~~Dl~d~~ 80 (452)
|+.+.|+.||.|+|| |.+|+.++..|+..+- .++.+.+.++++++....++.. ....... +..+- +
T Consensus 1 ~~~~~k~~KI~IIGa-G~VG~~lA~~l~~~~~------~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~-~~~~~-~-- 69 (154)
T d1pzga1 1 PALVQRRKKVAMIGS-GMIGGTMGYLCALREL------ADVVLYDVVKGMPEGKALDLSHVTSVVDTNVS-VRAEY-S-- 69 (154)
T ss_dssp CCCCSCCCEEEEECC-SHHHHHHHHHHHHHTC------CEEEEECSSSSHHHHHHHHHHHHHHHTTCCCC-EEEEC-S--
T ss_pred CccccCCCcEEEECC-CHHHHHHHHHHHhCCC------ceEEEEEeccccchhHHHHHhhhccccCCeeE-EeccC-c--
Confidence 455667889999998 9999999988877762 5899999999887766655521 0111222 22221 2
Q ss_pred HHHHHHcCccEEeecCCCCCC
Q 012947 81 SLHRLCSQTKLLLNCVGPYRL 101 (452)
Q Consensus 81 sl~~~~~~~dvVIn~aGp~~~ 101 (452)
.++.++++|+||.++|.-..
T Consensus 70 -~~~~~~~adiVvitag~~~~ 89 (154)
T d1pzga1 70 -YEAALTGADCVIVTAGLTKV 89 (154)
T ss_dssp -HHHHHTTCSEEEECCSCSSC
T ss_pred -hhhhhcCCCeEEEecccccC
Confidence 35677899999999986543
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.50 E-value=2.3e-05 Score=66.42 Aligned_cols=99 Identities=19% Similarity=0.220 Sum_probs=61.1
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
++++|-|+|||||+|+.+++.|.++.. |..++..++.+...-+.+ . ...-....-++++ ..+++
T Consensus 1 q~mnVaIvGATGyvG~eli~lL~~~~h----P~~~l~~~~s~~~~Gk~i----~---~~~~~~~~~~~~~-----~~~~~ 64 (144)
T d2hjsa1 1 QPLNVAVVGATGSVGEALVGLLDERDF----PLHRLHLLASAESAGQRM----G---FAESSLRVGDVDS-----FDFSS 64 (144)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTC----CCSCEEEEECTTTTTCEE----E---ETTEEEECEEGGG-----CCGGG
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCC----CceEEEEEeecccCCcce----e---eccccchhccchh-----hhhcc
Confidence 468999999999999999999986542 125666555433221111 0 0111222222221 23567
Q ss_pred ccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHH
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPE 125 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~ 125 (452)
+|+++.+++. ......+....+.|+..||+++...
T Consensus 65 ~d~vf~a~p~--~~s~~~~~~~~~~g~~VID~Ss~fR 99 (144)
T d2hjsa1 65 VGLAFFAAAA--EVSRAHAERARAAGCSVIDLSGALE 99 (144)
T ss_dssp CSEEEECSCH--HHHHHHHHHHHHTTCEEEETTCTTT
T ss_pred ceEEEecCCc--chhhhhccccccCCceEEeechhhc
Confidence 8999988752 2235667777888899999988643
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=97.50 E-value=5.5e-06 Score=79.83 Aligned_cols=41 Identities=15% Similarity=-0.064 Sum_probs=33.9
Q ss_pred CeEEEEc--CCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHH
Q 012947 11 FDVIILG--ASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQAL 58 (452)
Q Consensus 11 ~~ilV~G--ATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~ 58 (452)
.-+|||| ++.+||+.|++.|+++| .+|++.+|+........
T Consensus 3 kVAlITGaa~s~GIG~aiA~~la~~G-------A~V~i~~~~~~~~~~~~ 45 (329)
T d1uh5a_ 3 DICFIAGIGDTNGYGWGIAKELSKRN-------VKIIFGIWPPVYNIFMK 45 (329)
T ss_dssp CEEEEECCSSSSSHHHHHHHHHHHTT-------CEEEEEECGGGHHHHHH
T ss_pred cEEEEeCCCCCChHHHHHHHHHHHcC-------CEEEEEeCchhhhhhhH
Confidence 4589999 55699999999999999 89999999876554443
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=97.50 E-value=0.0013 Score=57.03 Aligned_cols=144 Identities=11% Similarity=0.023 Sum_probs=82.5
Q ss_pred CCCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHH
Q 012947 6 QIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLH 83 (452)
Q Consensus 6 ~~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~--~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~ 83 (452)
++.++.+|.|+||+|.+|+.++-.|++...-+......+.+.+.+. ++++.+..++..-......-+..- ....
T Consensus 20 ~~k~~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~----~~~~ 95 (175)
T d7mdha1 20 SWKKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIG----IDPY 95 (175)
T ss_dssp -CCCCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE----SCHH
T ss_pred ccCCCcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCcccc----ccch
Confidence 3446789999999999999999999874321111225667777654 556666555421011122222221 2356
Q ss_pred HHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHH
Q 012947 84 RLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFN 163 (452)
Q Consensus 84 ~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~ 163 (452)
+.++++|+||-++|.....|+.-.+.-..+ ...++...+...+.|.. .++|+-. +-|-|+.+|.+
T Consensus 96 ~~~~~aDvVvi~ag~~rkpg~tR~Dll~~N----------~~I~k~~~~~i~~~a~~-~~~vlvv----~NPvd~~t~ia 160 (175)
T d7mdha1 96 EVFEDVDWALLIGAKPRGPGMERAALLDIN----------GQIFADQGKALNAVASK-NVKVLVV----GNPCNTNALIC 160 (175)
T ss_dssp HHTTTCSEEEECCCCCCCTTCCHHHHHHHH----------HHHHHHHHHHHHHHSCT-TCEEEEC----SSSHHHHHHHH
T ss_pred hhccCCceEEEeeccCCCCCCcHHHHHHHH----------HHHHHHHHHHHHhhCCC-CcEEEEe----cCcHHHHHHHH
Confidence 788999999999997666553322222221 22334444444444433 3433321 34889999988
Q ss_pred hhhcC
Q 012947 164 SRQWI 168 (452)
Q Consensus 164 ~~~~~ 168 (452)
.+...
T Consensus 161 ~k~a~ 165 (175)
T d7mdha1 161 LKNAP 165 (175)
T ss_dssp HHTCT
T ss_pred HHHCC
Confidence 87754
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=97.43 E-value=0.00035 Score=60.43 Aligned_cols=131 Identities=18% Similarity=0.162 Sum_probs=78.3
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
+..+|+|+|+ |++++.++..|.+.+ .++.++.|+.++++.+.+.+.. ...+...+..+ .....
T Consensus 17 ~~k~vlIlGa-GGaarai~~aL~~~~-------~~i~I~nR~~~~a~~l~~~~~~----~~~~~~~~~~~-----~~~~~ 79 (171)
T d1p77a1 17 PNQHVLILGA-GGATKGVLLPLLQAQ-------QNIVLANRTFSKTKELAERFQP----YGNIQAVSMDS-----IPLQT 79 (171)
T ss_dssp TTCEEEEECC-SHHHHTTHHHHHHTT-------CEEEEEESSHHHHHHHHHHHGG----GSCEEEEEGGG-----CCCSC
T ss_pred CCCEEEEECC-cHHHHHHHHHHcccC-------ceeeeccchHHHHHHHHHHHhh----ccccchhhhcc-----ccccc
Confidence 3467999998 778999999998754 6899999999999999888742 22333333221 12467
Q ss_pred ccEEeecCCCCCCCCH-HHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCcc-EEEcCCCCCcchhhHHHHHHhhh
Q 012947 89 TKLLLNCVGPYRLHGD-PVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGS-LLVSACGFDSIPAELGVMFNSRQ 166 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~-~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv-~iv~~~G~~s~P~dl~~~~~~~~ 166 (452)
+|+||||......... +....-...+...+|+....+.. ..+-..|++.|. .++++. +|..+-+..+
T Consensus 80 ~diiIN~tp~g~~~~~~~~~~~~~~~~~~~~D~vy~~p~~----T~~l~~A~~~g~~~v~~Gl-------~Ml~~Qa~~~ 148 (171)
T d1p77a1 80 YDLVINATSAGLSGGTASVDAEILKLGSAFYDMQYAKGTD----TPFIALCKSLGLTNVSDGF-------GMLVAQAAHS 148 (171)
T ss_dssp CSEEEECCCC-------CCCHHHHHHCSCEEESCCCTTSC----CHHHHHHHHTTCCCEECSH-------HHHHHHHHHH
T ss_pred cceeeecccccccccccchhhhhhcccceeeeeeccCccc----HHHHHHHHHcCCCcccCcH-------HHHHHHHHHH
Confidence 8999999753322111 11112234566788887632211 112245677776 354332 4555555544
Q ss_pred c
Q 012947 167 W 167 (452)
Q Consensus 167 ~ 167 (452)
+
T Consensus 149 f 149 (171)
T d1p77a1 149 F 149 (171)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=97.41 E-value=0.0006 Score=56.98 Aligned_cols=128 Identities=13% Similarity=0.084 Sum_probs=77.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC--CCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--SHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~--~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
+||.|+|| |.+|..++-.|+..+-. -++.+.++++++++....++.. +......+.. .|. +.+++
T Consensus 1 mKI~IIGa-G~VG~~~a~~l~~~~l~-----~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~---~~~----~~~~~ 67 (140)
T d1a5za1 1 MKIGIVGL-GRVGSSTAFALLMKGFA-----REMVLIDVDKKRAEGDALDLIHGTPFTRRANIYA---GDY----ADLKG 67 (140)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCC-----SEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEE---CCG----GGGTT
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCC-----CEEEEEecccccccchhccccccccccccccccC---CcH----HHhcC
Confidence 58999997 99999999988888731 4899999999988766555421 1112333332 232 33789
Q ss_pred ccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhhc
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQW 167 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~~ 167 (452)
+|+||.++|.....++.=.+...+ ....++.+.+...+.+. ..+.|+ -+-|-|+.++.+.+.-
T Consensus 68 adivvitag~~~~~g~~r~dl~~~----------N~~I~~~i~~~i~~~~p-~aiviv-----vtNPvd~~t~~~~k~s 130 (140)
T d1a5za1 68 SDVVIVAAGVPQKPGETRLQLLGR----------NARVMKEIARNVSKYAP-DSIVIV-----VTNPVDVLTYFFLKES 130 (140)
T ss_dssp CSEEEECCCCCCCSSCCHHHHHHH----------HHHHHHHHHHHHHHHCT-TCEEEE-----CSSSHHHHHHHHHHHH
T ss_pred CCEEEEecccccCCCcchhhhhcc----------ccchHHHHHHHHHhcCC-CcEEEE-----eCCcHHHHHHHHHHHH
Confidence 999999999765554211111111 12233444333333332 233343 2468899999887764
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=97.40 E-value=7.8e-05 Score=65.14 Aligned_cols=96 Identities=16% Similarity=0.262 Sum_probs=57.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh---HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT---RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~---kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
++|-|+|||||+|+.+++.|.+|.. .++..+..+.. ++..+...+. ... ...-.+.+ .+.+
T Consensus 2 ikVaIvGATGyvG~eLirlL~~HP~------~ei~~l~s~~~aG~~i~~~~p~~~----~~~---~~~~~~~~---~~~~ 65 (176)
T d1vkna1 2 IRAGIIGATGYTGLELVRLLKNHPE------AKITYLSSRTYAGKKLEEIFPSTL----ENS---ILSEFDPE---KVSK 65 (176)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHCTT------EEEEEEECSTTTTSBHHHHCGGGC----CCC---BCBCCCHH---HHHH
T ss_pred eEEEEECCCcHHHHHHHHHHHhCCC------ceEEEeeccccCCCcccccCchhh----ccc---cccccCHh---Hhcc
Confidence 5799999999999999999998752 66655443222 2333222211 111 12223433 3445
Q ss_pred CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHH
Q 012947 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEF 126 (452)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~ 126 (452)
++|+|+.+.+. +...--+....++..||++++..+
T Consensus 66 ~~dvvf~a~p~----~~s~~~~~~~~~~~VIDlSadfRl 100 (176)
T d1vkna1 66 NCDVLFTALPA----GASYDLVRELKGVKIIDLGADFRF 100 (176)
T ss_dssp HCSEEEECCST----THHHHHHTTCCSCEEEESSSTTTC
T ss_pred ccceEEEcccc----HHHHHHHHhhccceEEecCccccc
Confidence 79999988742 222111222357789999998665
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=97.36 E-value=0.0004 Score=58.28 Aligned_cols=127 Identities=14% Similarity=0.118 Sum_probs=71.8
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC--CCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--SHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~--~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
+|.|+|| |.+|..++-.|+..+.. -++.+.++++++++....++.. +......+... | .+.++++
T Consensus 3 KI~IIGa-G~VG~~~a~~l~~~~l~-----~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~----~~~~~~a 69 (142)
T d1y6ja1 3 KVAIIGA-GFVGASAAFTMALRQTA-----NELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG---D----YSDVKDC 69 (142)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCS-----SEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----C----GGGGTTC
T ss_pred eEEEECC-CHHHHHHHHHHHhcCCC-----CEEEEEeccCCccceeeeeeccCcccCCCeeEeeC---c----HHHhCCC
Confidence 7999998 99999999999988731 3799999999887766666642 11122222221 2 2357899
Q ss_pred cEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhhc
Q 012947 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQW 167 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~~ 167 (452)
|+||.++|.....++.-.+...+ ....++.+.+...+.+- .++.|+- +-|-|+.++.+.+.-
T Consensus 70 divvitag~~~~~~~~r~~l~~~----------N~~i~~~i~~~i~~~~p-~ai~ivv-----tNPvdv~t~~~~k~s 131 (142)
T d1y6ja1 70 DVIVVTAGANRKPGETRLDLAKK----------NVMIAKEVTQNIMKYYN-HGVILVV-----SNPVDIITYMIQKWS 131 (142)
T ss_dssp SEEEECCCC------CHHHHHHH----------HHHHHHHHHHHHHHHCC-SCEEEEC-----SSSHHHHHHHHHHHH
T ss_pred ceEEEecccccCcCcchhHHhhH----------HHHHHHHHHHHhhccCC-CceEEEe-----cChHHHHHHHHHHHH
Confidence 99999999655444221222111 12333444333332221 3444442 458899999887764
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=97.30 E-value=0.0012 Score=55.30 Aligned_cols=130 Identities=14% Similarity=0.198 Sum_probs=79.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC--CCCCCccEEEEeCCCHHHHHHHHc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--SHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~--~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
|.||.|+|+ |.+|..++-.|+.++-. -++.+.++++++++....++.. .......+... +|. +.++
T Consensus 1 p~Ki~IIGa-G~VG~~~a~~l~~~~l~-----~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~--~~~----~~~~ 68 (143)
T d1llda1 1 PTKLAVIGA-GAVGSTLAFAAAQRGIA-----REIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDP----EICR 68 (143)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCC-----SEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCG----GGGT
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCC-----cEEEEEEeccccchhHHHHHHhccccCCCceeecC--CCH----HHhh
Confidence 357999997 99999999999988731 3899999999888765555531 11122233222 232 2477
Q ss_pred CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhhc
Q 012947 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQW 167 (452)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~~ 167 (452)
++|+||.++|.....++.=.+.... ....++.+.....+.+ -+++.|+ -+-|-|++++.+.+.-
T Consensus 69 daDvVVitaG~~~~~g~~R~dl~~~----------N~~i~~~i~~~i~~~~-p~ai~iv-----vtNPvDvmt~~~~~~s 132 (143)
T d1llda1 69 DADMVVITAGPRQKPGQSRLELVGA----------TVNILKAIMPNLVKVA-PNAIYML-----ITNPVDIATHVAQKLT 132 (143)
T ss_dssp TCSEEEECCCCCCCTTCCHHHHHHH----------HHHHHHHHHHHHHHHC-TTSEEEE-----CCSSHHHHHHHHHHHH
T ss_pred CCcEEEEecccccCCCCchhhhhhh----------hHHHHHHHHHHHHhhC-CCeEEEE-----eCCchHHHHHHHHHHH
Confidence 8999999999766554222222211 1233444444433322 2344444 2468899999888764
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.25 E-value=0.0038 Score=52.13 Aligned_cols=128 Identities=16% Similarity=0.088 Sum_probs=76.2
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCccE
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKL 91 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~dv 91 (452)
||.|+||+|.+|+.++-.|+..+-. -++++.+.++.+.+. .++.. ......... .....+..+.++++|+
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~~-----~elvLiDi~~~~~~a--~Dl~~--~~~~~~~~~-~~~~~~~~~~~~~aDi 71 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPLV-----SRLTLYDIAHTPGVA--ADLSH--IETRATVKG-YLGPEQLPDCLKGCDV 71 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTC-----SEEEEEESSSHHHHH--HHHTT--SSSSCEEEE-EESGGGHHHHHTTCSE
T ss_pred eEEEECCCChHHHHHHHHHHhCCcc-----ceEEEEeccccchhh--HHHhh--hhhhcCCCe-EEcCCChHHHhCCCCE
Confidence 6999999999999999988877631 479999998766544 34421 111111121 2234667788899999
Q ss_pred EeecCCCCCCCC---HHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhhcC
Q 012947 92 LLNCVGPYRLHG---DPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWI 168 (452)
Q Consensus 92 VIn~aGp~~~~~---~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~~~ 168 (452)
||.++|.-...+ ..+++.- ...++++.+...+... +++.++- +-|-|..++.+.+.++
T Consensus 72 vVitag~~~~~g~sR~~ll~~N-------------~~i~~~i~~~i~~~~p-~~iiivv-----tNPvD~~t~~~~~~~k 132 (144)
T d1mlda1 72 VVIPAGVPRKPGMTRDDLFNTN-------------ATIVATLTAACAQHCP-DAMICII-----SNPVNSTIPITAEVFK 132 (144)
T ss_dssp EEECCSCCCCTTCCGGGGHHHH-------------HHHHHHHHHHHHHHCT-TSEEEEC-----SSCHHHHHHHHHHHHH
T ss_pred EEECCCcCCCCCCCcchHHHHH-------------HHHHHHHHHHHHhcCC-CeEEEEe-----cCchhhhHHHHHHHHH
Confidence 999999544333 1111111 2233444443333322 3444442 3578888877776553
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=97.23 E-value=0.0012 Score=55.35 Aligned_cols=128 Identities=12% Similarity=0.031 Sum_probs=73.3
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC--hhHHHHHHHHhCC--CCCCCccEEEEeCCCHHHHHHHHc
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN--PTRVKQALQWASP--SHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~--~~kl~~l~~~l~~--~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
||.|+||+|.+|+.++-.|+.++-. -++.+.+++ +++++....++.. +......+...| .+ .++
T Consensus 2 KV~IiGaaG~VG~~~A~~l~~~~l~-----~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~---~~----~~~ 69 (142)
T d1o6za1 2 KVSVVGAAGTVGAAAGYNIALRDIA-----DEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGG---YE----DTA 69 (142)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCC-----SEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECC---GG----GGT
T ss_pred eEEEECCCCcHHHHHHHHHHhCCCC-----CEEEEEecCCcccccceeecchhhcccccCCceEeeCC---HH----Hhh
Confidence 6999999999999999999988731 378898854 4455444444421 112334443333 33 257
Q ss_pred CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhhc
Q 012947 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQW 167 (452)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~~ 167 (452)
++|+||.++|.....++.=.+.... ....++.+.+...+.+ -+++.++- +-|-|++++.+.|..
T Consensus 70 ~aDiVvitaG~~~~~g~~R~dl~~~----------N~~I~~~i~~~i~~~~-p~~i~ivv-----tNPvDvmt~~~~k~s 133 (142)
T d1o6za1 70 GSDVVVITAGIPRQPGQTRIDLAGD----------NAPIMEDIQSSLDEHN-DDYISLTT-----SNPVDLLNRHLYEAG 133 (142)
T ss_dssp TCSEEEECCCCCCCTTCCHHHHHHH----------HHHHHHHHHHHHHTTC-SCCEEEEC-----CSSHHHHHHHHHHHS
T ss_pred hcCEEEEecccccccCCchhhHHHH----------HHHHHHHHHHHHHhcC-CCceEEEe-----cChHHHHHHHHHHHH
Confidence 9999999999655544211111111 1122233322222111 12444442 468899998887774
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=97.21 E-value=0.00031 Score=59.91 Aligned_cols=112 Identities=20% Similarity=0.296 Sum_probs=74.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
|+|-|+|- |.+|+.+++.|++.| ++|.+.+|++++.+++.+.- .. . . ++..++++++|
T Consensus 1 MkIgiIGl-G~MG~~~A~~L~~~G-------~~V~~~d~~~~~~~~~~~~~-------~~--~--~---~~~~e~~~~~d 58 (161)
T d1vpda2 1 MKVGFIGL-GIMGKPMSKNLLKAG-------YSLVVSDRNPEAIADVIAAG-------AE--T--A---STAKAIAEQCD 58 (161)
T ss_dssp CEEEEECC-STTHHHHHHHHHHTT-------CEEEEECSCHHHHHHHHHTT-------CE--E--C---SSHHHHHHHCS
T ss_pred CEEEEEeh-hHHHHHHHHHHHHCC-------CeEEEEeCCcchhHHHHHhh-------hh--h--c---ccHHHHHhCCC
Confidence 57889986 999999999999998 89999999999998877632 11 1 1 23567788899
Q ss_pred EEeecCCCCCCCCHHHH---HHHH---HhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcC
Q 012947 91 LLLNCVGPYRLHGDPVA---AACV---HSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSA 148 (452)
Q Consensus 91 vVIn~aGp~~~~~~~vv---~ac~---~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~ 148 (452)
+||.|+... ..-+.++ +... ..+.-+||++...+-.. .+..+..++.|+.++.+
T Consensus 59 ~ii~~v~~~-~~v~~v~~~~~~~~~~~~~g~iiid~sT~~p~~~---~~~~~~~~~~g~~~vda 118 (161)
T d1vpda2 59 VIITMLPNS-PHVKEVALGENGIIEGAKPGTVLIDMSSIAPLAS---REISDALKAKGVEMLDA 118 (161)
T ss_dssp EEEECCSSH-HHHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHH---HHHHHHHHTTTCEEEEC
T ss_pred eEEEEcCCH-HHHHHHHhCCcchhhccCCCCEEEECCCCCHHHH---HHHHHHHHHcCCceecc
Confidence 999998321 1111222 1111 23566999987554322 23345566778887754
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=97.20 E-value=0.0011 Score=56.67 Aligned_cols=133 Identities=14% Similarity=0.107 Sum_probs=80.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHc
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~-~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
...+|.|+|+ |.+|..++-.|+.++-. -++++.++++++++....++.. ........+.. ..|. +.++
T Consensus 19 ~~~KV~IIGa-G~VG~~~A~~l~~~~l~-----~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~-~~d~----~~~~ 87 (160)
T d1i0za1 19 PNNKITVVGV-GQVGMACAISILGKSLA-----DELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVA-DKDY----SVTA 87 (160)
T ss_dssp CSSEEEEECC-SHHHHHHHHHHHHTTCC-----SEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEE-CSSG----GGGT
T ss_pred CCCeEEEECC-CHHHHHHHHHHHhcCCC-----cEEEEEEeccchhHHHHHHHhccccccCCCeEEe-ccch----hhcc
Confidence 4569999997 99999999999998731 3799999999988776666631 00111222222 2332 2378
Q ss_pred CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhhc
Q 012947 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQW 167 (452)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~~ 167 (452)
++|+||.++|.....++.=.+... .....++.+.....+.+ -.++.|+ -+-|-|+.++.+.+..
T Consensus 88 ~adiVVitAg~~~~~g~tR~~l~~----------~N~~i~~~i~~~i~~~~-p~aiiiv-----vtNPvDv~t~~~~k~s 151 (160)
T d1i0za1 88 NSKIVVVTAGVRQQEGESRLNLVQ----------RNVNVFKFIIPQIVKYS-PDCIIIV-----VSNPVDILTYVTWKLS 151 (160)
T ss_dssp TCSEEEECCSCCCCTTCCGGGGHH----------HHHHHHHHHHHHHHHHC-TTCEEEE-----CSSSHHHHHHHHHHHH
T ss_pred cccEEEEecCCccccCcchHHHHH----------HHHHHHHHHHHHHHhcC-CCcEEEE-----eCCchHHHHHHHHHHH
Confidence 999999999976544311001000 11223344433333322 2344444 2468899999888776
Q ss_pred C
Q 012947 168 I 168 (452)
Q Consensus 168 ~ 168 (452)
.
T Consensus 152 g 152 (160)
T d1i0za1 152 G 152 (160)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.19 E-value=0.00015 Score=61.24 Aligned_cols=99 Identities=11% Similarity=0.116 Sum_probs=63.0
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCccE
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKL 91 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~dv 91 (452)
+|-|+||||++|+.+++.|+++.. -+..++....++......... ..-.....++.+.+ .++++|+
T Consensus 3 kVaIvGATG~VGqeli~~Ll~~~~---~p~~~l~~~~ss~s~g~~~~~-------~~~~~~~~~~~~~~----~~~~~Di 68 (146)
T d1t4ba1 3 NVGFIGWRGMVGSVLMQRMVEERD---FDAIRPVFFSTSQLGQAAPSF-------GGTTGTLQDAFDLE----ALKALDI 68 (146)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTG---GGGSEEEEEESSSTTSBCCGG-------GTCCCBCEETTCHH----HHHTCSE
T ss_pred EEEEECCccHHHHHHHHHHHhCCC---CCeeEEEEeeccccccccccc-------cCCceeeecccchh----hhhcCcE
Confidence 799999999999999998887641 122577777665443211110 11122333444433 3578999
Q ss_pred EeecCCCCCCCCHHHHHHHHHhCCc--EEEecCcHHH
Q 012947 92 LLNCVGPYRLHGDPVAAACVHSGCD--YLDISGEPEF 126 (452)
Q Consensus 92 VIn~aGp~~~~~~~vv~ac~~~g~~--yvDlsge~~~ 126 (452)
+|.+++- .....++..+.+.|.. .||.++..-+
T Consensus 69 vF~a~~~--~~s~~~~~~~~~~g~~~~VID~Ss~fR~ 103 (146)
T d1t4ba1 69 IVTCQGG--DYTNEIYPKLRESGWQGYWIDAASSLRM 103 (146)
T ss_dssp EEECSCH--HHHHHHHHHHHHTTCCCEEEECSSTTTT
T ss_pred EEEecCc--hHHHHhhHHHHhcCCCeecccCCccccc
Confidence 9999842 2235677778888865 8899876443
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=97.18 E-value=0.00094 Score=57.30 Aligned_cols=103 Identities=13% Similarity=0.045 Sum_probs=65.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~-~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
.+|.|+|| |.+|..++..|+++| ++|.+.+|++++++.+.+.-.. .................++.+.++++
T Consensus 2 k~iaIiGa-G~~G~~~A~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~a 73 (184)
T d1bg6a2 2 KTYAVLGL-GNGGHAFAAYLALKG-------QSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDA 73 (184)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT-------CEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTC
T ss_pred CEEEEECc-cHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCC
Confidence 47999999 999999999999998 8999999999998877654211 00111122211111123467888999
Q ss_pred cEEeecCCCCCCCCHHHHHHHHHh---CCcEEEecCc
Q 012947 90 KLLLNCVGPYRLHGDPVAAACVHS---GCDYLDISGE 123 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~~~---g~~yvDlsge 123 (452)
|+||-++..+.. ..+++..... +...+..+|-
T Consensus 74 D~iii~v~~~~~--~~~~~~i~~~l~~~~~iv~~~g~ 108 (184)
T d1bg6a2 74 DVILIVVPAIHH--ASIAANIASYISEGQLIILNPGA 108 (184)
T ss_dssp SEEEECSCGGGH--HHHHHHHGGGCCTTCEEEESSCC
T ss_pred CEEEEEEchhHH--HHHHHHhhhccCCCCEEEEeCCC
Confidence 999998854321 3444444332 3334444443
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=97.16 E-value=0.00065 Score=58.38 Aligned_cols=74 Identities=18% Similarity=0.215 Sum_probs=62.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
++-+++|+|| |-.|...++-..+.| .+|.+.+++.++++++...+. ..+.. -..+++.+++.+++
T Consensus 31 ~pa~V~ViGa-GvaG~~A~~~A~~lG-------A~V~~~D~~~~~l~~l~~~~~----~~~~~---~~~~~~~l~~~~~~ 95 (168)
T d1pjca1 31 KPGKVVILGG-GVVGTEAAKMAVGLG-------AQVQIFDINVERLSYLETLFG----SRVEL---LYSNSAEIETAVAE 95 (168)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHHHHHHG----GGSEE---EECCHHHHHHHHHT
T ss_pred CCcEEEEECC-ChHHHHHHHHHhhCC-------CEEEEEeCcHHHHHHHHHhhc----cccee---ehhhhhhHHHhhcc
Confidence 5779999998 899999999999998 899999999999998877663 23333 34678999999999
Q ss_pred ccEEeecCC
Q 012947 89 TKLLLNCVG 97 (452)
Q Consensus 89 ~dvVIn~aG 97 (452)
+|+||.++=
T Consensus 96 aDivI~aal 104 (168)
T d1pjca1 96 ADLLIGAVL 104 (168)
T ss_dssp CSEEEECCC
T ss_pred CcEEEEeee
Confidence 999999984
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=97.14 E-value=0.00023 Score=60.23 Aligned_cols=99 Identities=14% Similarity=0.160 Sum_probs=60.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
|+|-|+|||||+|+.+++.|.++.. .+..++..+..+...-+. . .+ ..+ .....+..|.+ .++++|
T Consensus 1 mKVaIiGATGyvG~eLi~lLl~~~~---~p~~~i~~~ss~~~~gk~-~-~~----~~~-~~~~~~~~~~~----~~~~~D 66 (147)
T d1mb4a1 1 MRVGLVGWRGMVGSVLMQRMVEERD---FDLIEPVFFSTSQIGVPA-P-NF----GKD-AGMLHDAFDIE----SLKQLD 66 (147)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTG---GGGSEEEEEESSCCSSBC-C-CS----SSC-CCBCEETTCHH----HHTTCS
T ss_pred CEEEEECCccHHHHHHHHHHHhcCC---CCceEEEEeccccccccc-c-cc----CCc-ceeeecccchh----hhcccc
Confidence 5799999999999999999886431 112455554433221100 0 01 111 12222344433 357899
Q ss_pred EEeecCCCCCCCCHHHHHHHHHhCCc--EEEecCcHH
Q 012947 91 LLLNCVGPYRLHGDPVAAACVHSGCD--YLDISGEPE 125 (452)
Q Consensus 91 vVIn~aGp~~~~~~~vv~ac~~~g~~--yvDlsge~~ 125 (452)
+|+.|++. .....++....+.|.. .||++++..
T Consensus 67 vvF~alp~--~~s~~~~~~l~~~g~~~~VIDlSsdfR 101 (147)
T d1mb4a1 67 AVITCQGG--SYTEKVYPALRQAGWKGYWIDAASTLR 101 (147)
T ss_dssp EEEECSCH--HHHHHHHHHHHHTTCCSEEEESSSTTT
T ss_pred EEEEecCc--hHHHHHhHHHHHcCCceEEEeCCcccc
Confidence 99999842 2236778888888865 899998654
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.13 E-value=0.00081 Score=57.31 Aligned_cols=116 Identities=16% Similarity=0.129 Sum_probs=76.8
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCccE
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKL 91 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~dv 91 (452)
+|-|+|- |.+|..+++.|++.| ++|.+.+|+.++.+.+.+.- .... .+..++++++|+
T Consensus 3 kIg~IGl-G~MG~~iA~~L~~~g-------~~v~~~d~~~~~~~~~~~~~---------~~~~-----~~~~e~~~~~di 60 (162)
T d3cuma2 3 QIAFIGL-GHMGAPMATNLLKAG-------YLLNVFDLVQSAVDGLVAAG---------ASAA-----RSARDAVQGADV 60 (162)
T ss_dssp EEEEECC-STTHHHHHHHHHHTT-------CEEEEECSSHHHHHHHHHTT---------CEEC-----SSHHHHHTSCSE
T ss_pred EEEEEEE-HHHHHHHHHHHHHCC-------CeEEEEECchhhhhhhhhhh---------cccc-----chhhhhccccCe
Confidence 6888875 999999999999998 89999999999988776531 1111 235678889999
Q ss_pred EeecCCCCCCCCHHHHHH------HHHhCCcEEEecCcHH-HHHHHHHHHHHHHHhCccEEEcCCCCCcch
Q 012947 92 LLNCVGPYRLHGDPVAAA------CVHSGCDYLDISGEPE-FMERMEARYHEKAVETGSLLVSACGFDSIP 155 (452)
Q Consensus 92 VIn~aGp~~~~~~~vv~a------c~~~g~~yvDlsge~~-~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P 155 (452)
|+.|+... .....++.. ....+.-+||++...+ ..++ ..+..++.|+.++-+ +..+.|
T Consensus 61 ii~~v~~~-~~~~~v~~~~~~~~~~l~~g~iiid~st~~p~~~~~----~~~~~~~~gi~~~da-pv~Gg~ 125 (162)
T d3cuma2 61 VISMLPAS-QHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARK----IHAAARERGLAMLDA-PVSGGT 125 (162)
T ss_dssp EEECCSCH-HHHHHHHHSTTCHHHHSCTTCEEEECSCCCHHHHHH----HHHHHHHTTCEEEEC-CEESCH
T ss_pred eeecccch-hhHHHHHhccccccccCCCCCEEEECCCCCHHHHHH----HHHHHHHCCCcEEec-ccccCc
Confidence 99998321 111222211 1223556899986544 3333 345667788888753 444555
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=97.11 E-value=0.00029 Score=61.35 Aligned_cols=101 Identities=16% Similarity=0.312 Sum_probs=63.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEE-EEecCh-----hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLA-LAGRNP-----TRVKQALQWASPSHSLSIPILTADTTDPPSLHR 84 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~-iagR~~-----~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~ 84 (452)
++|.|.|||||+|+.+++.|.+|.. +++. +..++. +++......+. ......... ..+ ...
T Consensus 2 ikVaIiGATGyvG~eLlrlL~~HP~------~ei~~l~~~s~~~~aGk~~~~~~~~~~--~~~~~~~~~--~~~---~~~ 68 (179)
T d2g17a1 2 LNTLIVGASGYAGAELVSYVNRHPH------MTITALTVSAQSNDAGKLISDLHPQLK--GIVDLPLQP--MSD---VRD 68 (179)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTT------EEEEEEEEETTCTTTTCBHHHHCGGGT--TTCCCBEEE--ESC---GGG
T ss_pred cEEEEECcccHHHHHHHHHHHhCCC------CceEeeEeecccccccccccccccccc--ccccccccc--chh---hhh
Confidence 5899999999999999999999852 6764 333321 23333333221 111222222 222 223
Q ss_pred HHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHH
Q 012947 85 LCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEF 126 (452)
Q Consensus 85 ~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~ 126 (452)
...++|+|+.+.+.- .....+....+.++..||++++..+
T Consensus 69 ~~~~~dvvf~alp~~--~s~~~~~~~~~~~~~vIDlSadfRl 108 (179)
T d2g17a1 69 FSADVDVVFLATAHE--VSHDLAPQFLQAGCVVFDLSGAFRV 108 (179)
T ss_dssp TCTTCCEEEECSCHH--HHHHHHHHHHHTTCEEEECSSTTSS
T ss_pred hhcccceeeccccch--hHHHHhhhhhhcCceeecccccccc
Confidence 345789999997532 2246777888889999999986543
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.08 E-value=0.00094 Score=56.14 Aligned_cols=129 Identities=13% Similarity=0.083 Sum_probs=73.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHc-CCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 11 FDVIILGASGFTGKYVVREALKL-FNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~-g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
+||.|+||+|.+|+.++-.|+.+ +. ..++.+.+..+ +.+....++.. .......... ..... .+.++++
T Consensus 1 MKV~IiGaaG~VG~~~a~~l~~~~~~-----~~el~L~D~~~-~~~g~a~Dl~h-~~~~~~~~~~--~~~~~-~~~~~~a 70 (145)
T d2cmda1 1 MKVAVLGAAGGIGQALALLLKTQLPS-----GSELSLYDIAP-VTPGVAVDLSH-IPTAVKIKGF--SGEDA-TPALEGA 70 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCT-----TCEEEEECSST-THHHHHHHHHT-SCSSCEEEEE--CSSCC-HHHHTTC
T ss_pred CEEEEEcCCChHHHHHHHHHHhCCCC-----CcEEEEecccc-cchhHHHHHHC-CccccCCcEE--EcCCC-ccccCCC
Confidence 58999999999999999887654 31 14799999864 45444445531 0111121111 11122 3367899
Q ss_pred cEEeecCCCCCCCCH---HHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhh
Q 012947 90 KLLLNCVGPYRLHGD---PVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQ 166 (452)
Q Consensus 90 dvVIn~aGp~~~~~~---~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~ 166 (452)
|+||.++|.....++ .+++. ....++++.+...+.+. +++.|+ -+-|-|..++.+.+.
T Consensus 71 DvvvitaG~~~k~g~~R~dl~~~-------------N~~i~~~v~~~i~~~~p-~aiviv-----vtNPvD~m~~~~~~v 131 (145)
T d2cmda1 71 DVVLISAGVRRKPGMDRSDLFNV-------------NAGIVKNLVQQVAKTCP-KACIGI-----ITNPVNTTVAIAAEV 131 (145)
T ss_dssp SEEEECCSCCCCTTCCGGGGHHH-------------HHHHHHHHHHHHHHHCT-TSEEEE-----CSSSHHHHHHHHHHH
T ss_pred CEEEECCCccCCCCcchhhHHHH-------------HHHHHHHHHHHHHhhCC-CcEEEE-----ccCCchHHHHHHHHH
Confidence 999999996544431 11111 12233444333333332 344443 246889888888776
Q ss_pred cC
Q 012947 167 WI 168 (452)
Q Consensus 167 ~~ 168 (452)
+.
T Consensus 132 ~~ 133 (145)
T d2cmda1 132 LK 133 (145)
T ss_dssp HH
T ss_pred HH
Confidence 53
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=97.03 E-value=8.7e-05 Score=65.19 Aligned_cols=36 Identities=28% Similarity=0.337 Sum_probs=29.6
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEe
Q 012947 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAG 48 (452)
Q Consensus 7 ~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iag 48 (452)
+.++++|-|+|||||+|+.+++.|.+|.. .++..+.
T Consensus 2 s~~kikVaIlGATGyvG~elirLL~~HP~------~ei~~l~ 37 (183)
T d2cvoa1 2 SGEEVRIAVLGASGYTGAEIVRLLANHPQ------FRIKVMT 37 (183)
T ss_dssp CSSCEEEEEESCSSHHHHHHHHHHTTCSS------EEEEEEE
T ss_pred CCCccEEEEECcccHHHHHHHHHHHhCCC------ceEEEEe
Confidence 34679999999999999999999998852 6766554
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.03 E-value=0.0027 Score=53.03 Aligned_cols=129 Identities=14% Similarity=0.122 Sum_probs=75.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC---CCCCCccEEEEeCCCHHHHHHHHc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP---SHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~---~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
|||.|+|| |.+|..++-.|+.++.. -++++.++++++++....++.. .......+... .|. +.++
T Consensus 1 MKI~IIGa-G~VG~~~a~~l~~~~~~-----~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~--~d~----~~~~ 68 (142)
T d1ojua1 1 MKLGFVGA-GRVGSTSAFTCLLNLDV-----DEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADY----SLLK 68 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCC-----SEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCG----GGGT
T ss_pred CEEEEECc-CHHHHHHHHHHHhcCcC-----ceEEEEecccchhhHHHHHHhhhccccCCCCccccC--CCH----HHhc
Confidence 58999997 99999999999988731 4799999999987765544421 01122233322 232 3678
Q ss_pred CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhhc
Q 012947 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQW 167 (452)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~~ 167 (452)
++|+||.++|.....+..=.+...+ ....++...+...+.+. .++.++. +-|-|+.+|.+.+..
T Consensus 69 ~adiVvitag~~~~~g~~r~~l~~~----------n~~i~~~i~~~i~~~~p-~aivivv-----tNPvD~~t~~~~k~s 132 (142)
T d1ojua1 69 GSEIIVVTAGLARKPGMTRLDLAHK----------NAGIIKDIAKKIVENAP-ESKILVV-----TNPMDVMTYIMWKES 132 (142)
T ss_dssp TCSEEEECCCCCCCSSCCHHHHHHH----------HHHHHHHHHHHHHTTST-TCEEEEC-----SSSHHHHHHHHHHHS
T ss_pred cccEEEEeccccCCCCCchHHHHHH----------hhHHHHHHHHHHHhhCC-CcEEEEe-----cCChHHHHHHHHHHH
Confidence 9999999999544444211111111 11222233222222111 2334432 348899999887775
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=97.02 E-value=0.0045 Score=51.40 Aligned_cols=129 Identities=11% Similarity=0.063 Sum_probs=76.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCC---CCCCccEEEEeCCCHHHHHHHHc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS---HSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~---~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
+||.|+|| |.+|..++..|+..+-. -++++.++++++++....++... ......+... +|. +.++
T Consensus 1 mKI~IIGa-G~VG~~la~~l~~~~l~-----~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~----~~~~ 68 (142)
T d1guza1 1 MKITVIGA-GNVGATTAFRLAEKQLA-----RELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDY----ADTA 68 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCC-----SEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCG----GGGT
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCC-----ceEEEeccccccchhhhhhhhcccchhcccceEEec--CCH----HHhc
Confidence 58999997 99999999999988731 48999999998877655444210 1123333322 333 3468
Q ss_pred CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhhc
Q 012947 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQW 167 (452)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~~ 167 (452)
++|+||.++|.....++.=.+...+ ....++...+...+.+ ..++.++ -+-|-|+.++.+.+..
T Consensus 69 dadvvvitag~~~~~g~~r~~l~~~----------N~~i~~~i~~~i~~~~-p~aiviv-----vtNPvd~~~~~~~~~s 132 (142)
T d1guza1 69 NSDIVIITAGLPRKPGMTREDLLMK----------NAGIVKEVTDNIMKHS-KNPIIIV-----VSNPLDIMTHVAWVRS 132 (142)
T ss_dssp TCSEEEECCSCCCCTTCCHHHHHHH----------HHHHHHHHHHHHHHHC-SSCEEEE-----CCSSHHHHHHHHHHHH
T ss_pred CCeEEEEEEecCCCCCCchHHHHHH----------HHHHHHHHHHHhhccC-CCeEEEE-----ecCChHHHHHHHHHHh
Confidence 9999999999655544211111111 1222333333333222 2233333 2458899998887764
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=96.99 E-value=0.001 Score=57.63 Aligned_cols=73 Identities=15% Similarity=0.026 Sum_probs=52.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCH---HHHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDP---PSLHRLC 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~---~sl~~~~ 86 (452)
.-.|+|+||+|.+|..+++.....| .+|+...|++++.+.+.+ ++ ...+ .|..++ +.+.+..
T Consensus 30 G~~VlV~ga~ggvG~~aiqlak~~G-------a~vi~~~~~~~~~~~~~~-~G------a~~v-i~~~~~~~~~~~~~~~ 94 (182)
T d1v3va2 30 GETVLVSAAAGAVGSVVGQIAKLKG-------CKVVGAAGSDEKIAYLKQ-IG------FDAA-FNYKTVNSLEEALKKA 94 (182)
T ss_dssp SCEEEESSTTSHHHHHHHHHHHHTT-------CEEEEEESSHHHHHHHHH-TT------CSEE-EETTSCSCHHHHHHHH
T ss_pred CCEEEEEeCCCchhHHHHHHHHccC-------CEEEEeCCCHHHHHHHHh-hh------hhhh-cccccccHHHHHHHHh
Confidence 3579999999999999999988888 899999999998765544 43 1222 233333 3333333
Q ss_pred c--CccEEeecCC
Q 012947 87 S--QTKLLLNCVG 97 (452)
Q Consensus 87 ~--~~dvVIn~aG 97 (452)
. ++|+|++++|
T Consensus 95 ~~~Gvd~v~D~vG 107 (182)
T d1v3va2 95 SPDGYDCYFDNVG 107 (182)
T ss_dssp CTTCEEEEEESSC
T ss_pred hcCCCceeEEecC
Confidence 2 5899999987
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=96.98 E-value=0.0012 Score=56.62 Aligned_cols=74 Identities=19% Similarity=0.183 Sum_probs=53.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
.-+|+|+||+|.+|...++.+...| .+|+++.+++++++.+. +++. +. ..|..+...-...-.++
T Consensus 28 g~~VlI~ga~G~vG~~aiqlak~~G-------~~vi~~~~~~~~~~~~~-~lGa------~~-~i~~~~~~~~~~~~~g~ 92 (171)
T d1iz0a2 28 GEKVLVQAAAGALGTAAVQVARAMG-------LRVLAAASRPEKLALPL-ALGA------EE-AATYAEVPERAKAWGGL 92 (171)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHTT-------CEEEEEESSGGGSHHHH-HTTC------SE-EEEGGGHHHHHHHTTSE
T ss_pred CCEEEEEeccccchhhhhhhhcccc-------ccccccccccccccccc-cccc------ce-eeehhhhhhhhhccccc
Confidence 3579999999999999999888877 79999999998886544 4542 22 23554433323334578
Q ss_pred cEEeecCCC
Q 012947 90 KLLLNCVGP 98 (452)
Q Consensus 90 dvVIn~aGp 98 (452)
|+||+|+|+
T Consensus 93 D~v~d~~G~ 101 (171)
T d1iz0a2 93 DLVLEVRGK 101 (171)
T ss_dssp EEEEECSCT
T ss_pred cccccccch
Confidence 999999874
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.97 E-value=0.0016 Score=55.89 Aligned_cols=73 Identities=11% Similarity=0.050 Sum_probs=52.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH---H
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL---C 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~---~ 86 (452)
.-+|+|+||+|.+|...++.+...| .+++++.+++++++.+ .+++. . ...|.++++-.+++ .
T Consensus 29 g~~VlV~Ga~G~vG~~aiq~a~~~G-------~~vi~~~~~~~~~~~~-~~~Ga------~-~vi~~~~~~~~~~i~~~t 93 (174)
T d1yb5a2 29 GESVLVHGASGGVGLAACQIARAYG-------LKILGTAGTEEGQKIV-LQNGA------H-EVFNHREVNYIDKIKKYV 93 (174)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTT-------CEEEEEESSHHHHHHH-HHTTC------S-EEEETTSTTHHHHHHHHH
T ss_pred CCEEEEEeccccccccccccccccC-------cccccccccccccccc-cccCc------c-cccccccccHHHHhhhhh
Confidence 3479999999999999999888887 7999999999887554 45542 2 13466665433333 2
Q ss_pred c--CccEEeecCC
Q 012947 87 S--QTKLLLNCVG 97 (452)
Q Consensus 87 ~--~~dvVIn~aG 97 (452)
. ..|+|++|+|
T Consensus 94 ~~~g~d~v~d~~g 106 (174)
T d1yb5a2 94 GEKGIDIIIEMLA 106 (174)
T ss_dssp CTTCEEEEEESCH
T ss_pred ccCCceEEeeccc
Confidence 2 4799999886
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=96.95 E-value=0.0064 Score=52.13 Aligned_cols=118 Identities=14% Similarity=0.097 Sum_probs=79.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
-+|-|+|- |.+|..+++.|++.| ++|.+.+|++++.+++.++-. ...... .....+++.+.+..+|
T Consensus 3 ~nIg~IGl-G~MG~~mA~~L~~~G-------~~V~v~dr~~~~~~~l~~~~~----~~~~~~--~a~~~~~~~~~~~~~~ 68 (176)
T d2pgda2 3 ADIALIGL-AVMGQNLILNMNDHG-------FVVCAFNRTVSKVDDFLANEA----KGTKVL--GAHSLEEMVSKLKKPR 68 (176)
T ss_dssp BSEEEECC-SHHHHHHHHHHHHTT-------CCEEEECSSTHHHHHHHHTTT----TTSSCE--ECSSHHHHHHHBCSSC
T ss_pred CcEEEEeE-hHHHHHHHHHHHHCC-------CeEEEEcCCHHHHHHHHHhcc----cccccc--chhhhhhhhhhhcccc
Confidence 46889997 999999999999998 899999999999998876432 111111 2456788899999999
Q ss_pred EEeecCCCCCCCCHHHHHHHHH---hCCcEEEecCc-HHHHHHHHHHHHHHHHhCccEEEc
Q 012947 91 LLLNCVGPYRLHGDPVAAACVH---SGCDYLDISGE-PEFMERMEARYHEKAVETGSLLVS 147 (452)
Q Consensus 91 vVIn~aGp~~~~~~~vv~ac~~---~g~~yvDlsge-~~~~~~~~~~~~~~A~~~gv~iv~ 147 (452)
++|.++-..... ..+.+.... .+..+||.+.. +...+++ .+..++.|+.++-
T Consensus 69 ~ii~~~~~~~~v-~~v~~~l~~~~~~g~iiid~sT~~~~~~~~~----~~~~~~~g~~~ld 124 (176)
T d2pgda2 69 RIILLVKAGQAV-DNFIEKLVPLLDIGDIIIDGGNSEYRDTMRR----CRDLKDKGILFVG 124 (176)
T ss_dssp EEEECSCTTHHH-HHHHHHHHHHCCTTCEEEECSCCCHHHHHHH----HHHHHHTTCEEEE
T ss_pred eEEEecCchHHH-HHHHHHHHhccccCcEEEecCcchhHHHHHH----HHHHHhcCCceec
Confidence 999987322110 122222222 35678998764 3433443 3445667887774
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=96.92 E-value=0.0018 Score=54.26 Aligned_cols=75 Identities=11% Similarity=0.155 Sum_probs=61.5
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-HcCcc
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQTK 90 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~-~~~~d 90 (452)
.|+|+|. |-+|+.+++.|.+.+ .++.++..++++.....++.. ..++.++.+|.+|++.|+++ +++++
T Consensus 5 HiII~G~-g~~g~~l~~~L~~~~-------~~v~vId~d~~~~~~~~~~~~---~~~~~vi~Gd~~d~~~L~~a~i~~a~ 73 (153)
T d1id1a_ 5 HFIVCGH-SILAINTILQLNQRG-------QNVTVISNLPEDDIKQLEQRL---GDNADVIPGDSNDSSVLKKAGIDRCR 73 (153)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTT-------CCEEEEECCCHHHHHHHHHHH---CTTCEEEESCTTSHHHHHHHTTTTCS
T ss_pred EEEEECC-CHHHHHHHHHHHHcC-------CCEEEEeccchhHHHHHHHhh---cCCcEEEEccCcchHHHHHhccccCC
Confidence 5888888 788999999999988 788999999887666655542 34688999999999998765 67899
Q ss_pred EEeecCC
Q 012947 91 LLLNCVG 97 (452)
Q Consensus 91 vVIn~aG 97 (452)
.||-+.+
T Consensus 74 ~vi~~~~ 80 (153)
T d1id1a_ 74 AILALSD 80 (153)
T ss_dssp EEEECSS
T ss_pred EEEEccc
Confidence 9998764
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=96.89 E-value=0.00016 Score=62.94 Aligned_cols=132 Identities=11% Similarity=0.058 Sum_probs=74.5
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCC-CCCCc-cEEEEeCCCHHHHHHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSI-PILTADTTDPPSLHRLC 86 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~-~~~~v-~~v~~Dl~d~~sl~~~~ 86 (452)
+..+|+|+|+ |++++.++..|.+. -++.|+.|+.++.+++.+++... ..... .+-..|+ ....
T Consensus 17 ~~k~vlIlGa-GG~arai~~aL~~~--------~~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~~~~~~------~~~~ 81 (177)
T d1nvta1 17 KDKNIVIYGA-GGAARAVAFELAKD--------NNIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGL------DVDL 81 (177)
T ss_dssp CSCEEEEECC-SHHHHHHHHHHTSS--------SEEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECT------TCCC
T ss_pred CCCEEEEECC-cHHHHHHHHHHccc--------cceeeehhhhhHHHHHHHHHHHhhchhhhhhhhhhhh------hhcc
Confidence 4568999998 77899999888543 38999999999998887766310 00111 1122222 2234
Q ss_pred cCccEEeecCCCCCC--CCH-HHHH-HHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHH
Q 012947 87 SQTKLLLNCVGPYRL--HGD-PVAA-ACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMF 162 (452)
Q Consensus 87 ~~~dvVIn~aGp~~~--~~~-~vv~-ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~ 162 (452)
...|++|||...... ... +.+. .....+...+|+...+.-+.. -..|++.|..++++. +|..+-
T Consensus 82 ~~~dliIn~tp~g~~~~~~~~~~~~~~~~~~~~~v~D~~y~p~~T~l-----~~~a~~~G~~~i~Gl-------~MLv~Q 149 (177)
T d1nvta1 82 DGVDIIINATPIGMYPNIDVEPIVKAEKLREDMVVMDLIYNPLETVL-----LKEAKKVNAKTINGL-------GMLIYQ 149 (177)
T ss_dssp TTCCEEEECSCTTCTTCCSSCCSSCSTTCCSSSEEEECCCSSSSCHH-----HHHHHTTTCEEECTH-------HHHHHH
T ss_pred chhhhhccCCcccccccccccchhhhhccCcccceeeecCCcHhHHH-----HHHHHHCCCcccCCH-------HHHHHH
Confidence 578999998643211 100 0011 111223346677654433222 234667788877542 456655
Q ss_pred Hhhhc
Q 012947 163 NSRQW 167 (452)
Q Consensus 163 ~~~~~ 167 (452)
+..++
T Consensus 150 a~~qf 154 (177)
T d1nvta1 150 GAVAF 154 (177)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55444
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.89 E-value=0.00016 Score=61.65 Aligned_cols=97 Identities=18% Similarity=0.184 Sum_probs=59.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
|+|-|+|||||+|+.+++.|.+|.- +..++.....+...-+ .+. .........+..+ ..+.+.|
T Consensus 2 ~kVaIvGATGyvG~eLirlL~~H~f----p~~~l~~~~s~~s~G~----~~~---~~~~~~~~~~~~~-----~~~~~~d 65 (154)
T d2gz1a1 2 YTVAVVGATGAVGAQMIKMLEESTL----PIDKIRYLASARSAGK----SLK---FKDQDITIEETTE-----TAFEGVD 65 (154)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCCS----CEEEEEEEECGGGTTC----EEE---ETTEEEEEEECCT-----TTTTTCS
T ss_pred CEEEEECCCcHHHHHHHHHHHcCCC----CceEEEEecccccccc----ccc---ccCCcccccccch-----hhhhhhh
Confidence 6899999999999999999988741 1245555543222111 110 0111222223322 2345789
Q ss_pred EEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHH
Q 012947 91 LLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPE 125 (452)
Q Consensus 91 vVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~ 125 (452)
+++.++++.. ....+....+.++..||++++..
T Consensus 66 ~~f~~~~~~~--s~~~~~~~~~~~~~VIDlSsdfR 98 (154)
T d2gz1a1 66 IALFSAGSST--SAKYAPYAVKAGVVVVDNTSYFR 98 (154)
T ss_dssp EEEECSCHHH--HHHHHHHHHHTTCEEEECSSTTT
T ss_pred hhhhccCccc--hhhHHhhhccccceehhcChhhh
Confidence 9998886432 24566677788999999998755
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=96.89 E-value=0.0018 Score=55.48 Aligned_cols=74 Identities=16% Similarity=0.116 Sum_probs=54.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHH---HHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPS---LHRLC 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~s---l~~~~ 86 (452)
.-+|+|+||+|.+|..+++.....| .+|++..++++|.+.++ +++. . ...|.++++- +.++.
T Consensus 29 g~~Vlv~ga~g~vG~~~iqlak~~G-------a~Vi~~~~s~~k~~~~~-~lGa------~-~vi~~~~~d~~~~v~~~t 93 (179)
T d1qora2 29 DEQFLFHAAAGGVGLIACQWAKALG-------AKLIGTVGTAQKAQSAL-KAGA------W-QVINYREEDLVERLKEIT 93 (179)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHHT-------CEEEEEESSHHHHHHHH-HHTC------S-EEEETTTSCHHHHHHHHT
T ss_pred CCEEEEEccccccchHHHHHHHHhC-------CeEeecccchHHHHHHH-hcCC------e-EEEECCCCCHHHHHHHHh
Confidence 3579999999999999999988888 89999999999986554 5542 2 2346666433 33333
Q ss_pred c--CccEEeecCCC
Q 012947 87 S--QTKLLLNCVGP 98 (452)
Q Consensus 87 ~--~~dvVIn~aGp 98 (452)
. +.|+|++++|.
T Consensus 94 ~g~g~d~v~d~~g~ 107 (179)
T d1qora2 94 GGKKVRVVYDSVGR 107 (179)
T ss_dssp TTCCEEEEEECSCG
T ss_pred CCCCeEEEEeCccH
Confidence 2 47999999874
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.85 E-value=0.0019 Score=55.54 Aligned_cols=73 Identities=15% Similarity=0.118 Sum_probs=52.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHH---HHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPP---SLHRLC 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~---sl~~~~ 86 (452)
.-+|+|+||+|.+|..+++.+...+ .+++++.++.++.+.+ ++++ ... ..|..+++ .+.+..
T Consensus 26 g~~VlI~ga~g~vG~~~iqla~~~g-------~~vi~~~~~~~~~~~l-~~~G------a~~-vi~~~~~~~~~~v~~~t 90 (183)
T d1pqwa_ 26 GERVLIHSATGGVGMAAVSIAKMIG-------ARIYTTAGSDAKREML-SRLG------VEY-VGDSRSVDFADEILELT 90 (183)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHHT-------CEEEEEESSHHHHHHH-HTTC------CSE-EEETTCSTHHHHHHHHT
T ss_pred CCEEEEECCCCCcccccchhhcccc-------ccceeeeccccccccc-cccc------ccc-cccCCccCHHHHHHHHh
Confidence 3579999999999999999988888 7999999999887544 4443 222 24555543 333333
Q ss_pred --cCccEEeecCC
Q 012947 87 --SQTKLLLNCVG 97 (452)
Q Consensus 87 --~~~dvVIn~aG 97 (452)
+++|+|++|+|
T Consensus 91 ~~~g~d~v~d~~g 103 (183)
T d1pqwa_ 91 DGYGVDVVLNSLA 103 (183)
T ss_dssp TTCCEEEEEECCC
T ss_pred CCCCEEEEEeccc
Confidence 35899999987
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.81 E-value=0.006 Score=51.78 Aligned_cols=131 Identities=14% Similarity=0.133 Sum_probs=77.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC--CCCCCccEEEEeCCCHHHHHHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--SHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~--~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
.+-+|.|+|+ |.+|..++-.|+..+-. -++++.++++++++....++.. ........+.. .|. +.+
T Consensus 18 ~~~KI~IIGa-G~VG~~~A~~l~~~~l~-----~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~--~d~----~~~ 85 (159)
T d2ldxa1 18 SRCKITVVGV-GDVGMACAISILLKGLA-----DELALVDADTDKLRGEALDLQHGSLFLSTPKIVFG--KDY----NVS 85 (159)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHTTTSC-----SEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEE--SSG----GGG
T ss_pred CCCeEEEECC-CHHHHHHHHHHHhcCCC-----CEEEEEeCCchhhhccHHHHhCcchhcCCCeEEec--cch----hhh
Confidence 3458999997 99999999999988731 3799999999988777666631 11111222222 232 346
Q ss_pred cCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEe-cCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhh
Q 012947 87 SQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDI-SGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSR 165 (452)
Q Consensus 87 ~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDl-sge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~ 165 (452)
+++|+||.++|.....++ ...|+ ......++.+.....+.+ -.++.|+- +-|-|+.+|.+.+
T Consensus 86 ~~adivvitag~~~~~~~-----------~R~dll~~N~~i~~~i~~~i~~~~-p~~ivivv-----tNPvDv~t~~~~k 148 (159)
T d2ldxa1 86 ANSKLVIITAGARMVSGQ-----------TRLDLLQRNVAIMKAIVPGVIQNS-PDCKIIVV-----TNPVDILTYVVWK 148 (159)
T ss_dssp TTEEEEEECCSCCCCTTT-----------CSSCTTHHHHHHHHHHTTTHHHHS-TTCEEEEC-----SSSHHHHHHHHHH
T ss_pred ccccEEEEecccccCCCC-----------CHHHHHHHHHHHHHHHHHHHhccC-CCeEEEEe-----CCcHHHHHHHHHH
Confidence 789999999996544331 01111 011222333333333222 23444442 3588999998877
Q ss_pred hcC
Q 012947 166 QWI 168 (452)
Q Consensus 166 ~~~ 168 (452)
...
T Consensus 149 ~sg 151 (159)
T d2ldxa1 149 ISG 151 (159)
T ss_dssp HHC
T ss_pred HHC
Confidence 653
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=96.79 E-value=0.0012 Score=55.73 Aligned_cols=68 Identities=19% Similarity=0.289 Sum_probs=54.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
|+|.++|+ |-+|+.+++.|.+.+ .++.+.+|+.++.+++.++++. .+ .. +.+++++++|
T Consensus 1 MkIg~IG~-G~mG~al~~~l~~~~-------~~i~v~~r~~~~~~~l~~~~g~------~~----~~---~~~~~~~~~d 59 (152)
T d2ahra2 1 MKIGIIGV-GKMASAIIKGLKQTP-------HELIISGSSLERSKEIAEQLAL------PY----AM---SHQDLIDQVD 59 (152)
T ss_dssp CEEEEECC-SHHHHHHHHHHTTSS-------CEEEEECSSHHHHHHHHHHHTC------CB----CS---SHHHHHHTCS
T ss_pred CEEEEEec-cHHHHHHHHHHHhCC-------CeEEEEcChHHhHHhhccccce------ee----ec---hhhhhhhccc
Confidence 57889986 999999999998876 7999999999999988887641 11 12 3566778999
Q ss_pred EEeecCCCC
Q 012947 91 LLLNCVGPY 99 (452)
Q Consensus 91 vVIn~aGp~ 99 (452)
+||-|+-|.
T Consensus 60 vIilavkp~ 68 (152)
T d2ahra2 60 LVILGIKPQ 68 (152)
T ss_dssp EEEECSCGG
T ss_pred eeeeecchH
Confidence 999998653
|
| >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Acetaldehyde dehydrogenase (acylating) species: Pseudomonas sp. [TaxId: 306]
Probab=96.68 E-value=0.0016 Score=55.31 Aligned_cols=101 Identities=14% Similarity=0.198 Sum_probs=57.5
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEE-EEEecChh-HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH
Q 012947 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPT-RVKQALQWASPSHSLSIPILTADTTDPPSLHR 84 (452)
Q Consensus 7 ~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v-~iagR~~~-kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~ 84 (452)
|++++++-|+| +|.+|+.....+++..+ ..++ ++++|+.+ +.....++.+ +.+. ..+.+++.+
T Consensus 1 M~kkirvaIIG-aG~ig~~~~~~~l~~~~-----~~el~avas~~~~~~~~~~a~~~~------i~~~---~~~~d~l~~ 65 (157)
T d1nvmb1 1 MNQKLKVAIIG-SGNIGTDLMIKVLRNAK-----YLEMGAMVGIDAASDGLARAQRMG------VTTT---YAGVEGLIK 65 (157)
T ss_dssp CCSCEEEEEEC-CSHHHHHHHHHHHHHCS-----SEEEEEEECSCTTCHHHHHHHHTT------CCEE---SSHHHHHHH
T ss_pred CCCCcEEEEEc-CcHHHHHHHHHHHhhCC-----cceEEEEEecchhccchhhhhhcC------Cccc---ccceeeeee
Confidence 45678999999 79999865444445432 1454 56788765 3334444432 2322 223455555
Q ss_pred HH--cCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecC
Q 012947 85 LC--SQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISG 122 (452)
Q Consensus 85 ~~--~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsg 122 (452)
.. .++|+|+.+............-...++|++.||.+.
T Consensus 66 ~~~~~~iDiVf~ATpag~h~~~~~~~~aa~~G~~VID~s~ 105 (157)
T d1nvmb1 66 LPEFADIDFVFDATSASAHVQNEALLRQAKPGIRLIDLTP 105 (157)
T ss_dssp SGGGGGEEEEEECSCHHHHHHHHHHHHHHCTTCEEEECST
T ss_pred cccccccCEEEEcCCchhHHHhHHHHHHHHcCCEEEEccc
Confidence 43 478999987632211111122333567888999886
|
| >d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Maltose-6'-phosphate glucosidase GlvA species: Bacillus subtilis [TaxId: 1423]
Probab=96.63 E-value=0.0028 Score=54.42 Aligned_cols=147 Identities=12% Similarity=0.096 Sum_probs=84.5
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC---CCCCCccEEEEeCCCHHHHHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP---SHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~---~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
+.++|.|+||++.-...++..++.+-+ .+ ..-++++.+.++++++...+.+.. .......+... .+..++
T Consensus 2 k~~KI~iIGaGsv~~~~~~~~ll~~~~-~l-~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~ea 74 (167)
T d1u8xx1 2 KSFSIVIAGGGSTFTPGIVLMLLDHLE-EF-PIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT-----TDPEEA 74 (167)
T ss_dssp CCEEEEEECTTSSSHHHHHHHHHHTTT-TS-CEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE-----SCHHHH
T ss_pred CCceEEEECCChhhhHHHHHHHHhhhh-hc-CCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec-----CChhhc
Confidence 568999999955433345555555432 11 114899999999998754333311 00122333322 236778
Q ss_pred HcCccEEeecCCCCCCCC-HHHHHHHHHhCCcEEEecCcHHH---------HHHHHHHHHHHHHhCccEEEcCCCCCcch
Q 012947 86 CSQTKLLLNCVGPYRLHG-DPVAAACVHSGCDYLDISGEPEF---------MERMEARYHEKAVETGSLLVSACGFDSIP 155 (452)
Q Consensus 86 ~~~~dvVIn~aGp~~~~~-~~vv~ac~~~g~~yvDlsge~~~---------~~~~~~~~~~~A~~~gv~iv~~~G~~s~P 155 (452)
++++|+||+++|+....+ ........+.|+.--|..|...+ ++++.+...+.+ -.+++++- +-|
T Consensus 75 l~~AD~Vvitag~~~~~g~~rd~~i~~~~Gi~~~~t~g~gg~~~~~r~i~ii~~i~~~i~~~~--P~A~li~~----TNP 148 (167)
T d1u8xx1 75 FTDVDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYS--PDAWMLNY----SNP 148 (167)
T ss_dssp HSSCSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHC--TTCEEEEC----CSC
T ss_pred cCCCCEEEECCCcCCCCceeHHHhhchhcCceeeccccCcchheehhhHHHHHHHHHHHHhhC--CCeEEEEe----CCH
Confidence 899999999999765444 34445566666644355444333 233322222222 24454433 568
Q ss_pred hhHHHHHHhhhcC
Q 012947 156 AELGVMFNSRQWI 168 (452)
Q Consensus 156 ~dl~~~~~~~~~~ 168 (452)
-|+.++.+.+.+.
T Consensus 149 vdv~t~~~~k~~P 161 (167)
T d1u8xx1 149 AAIVAEATRRLRP 161 (167)
T ss_dssp HHHHHHHHHHHST
T ss_pred HHHHHHHHHHHCC
Confidence 9999999988863
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=96.62 E-value=0.0031 Score=53.62 Aligned_cols=72 Identities=13% Similarity=0.115 Sum_probs=56.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
-+|+|+|+ |.+|...++.+...| .++++++++.++++ +.++++. . ...|..+++......+++|
T Consensus 32 ~~VlI~Ga-G~vG~~a~qlak~~G-------a~~i~~~~~~~~~~-~a~~lGa------d-~~i~~~~~~~~~~~~~~~D 95 (168)
T d1uufa2 32 KKVGVVGI-GGLGHMGIKLAHAMG-------AHVVAFTTSEAKRE-AAKALGA------D-EVVNSRNADEMAAHLKSFD 95 (168)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT-------CEEEEEESSGGGHH-HHHHHTC------S-EEEETTCHHHHHTTTTCEE
T ss_pred CEEEEecc-chHHHHHHHHhhccc-------ccchhhccchhHHH-HHhccCC------c-EEEECchhhHHHHhcCCCc
Confidence 57999987 889999998888777 78888999999874 4566652 2 2357888777777777899
Q ss_pred EEeecCCC
Q 012947 91 LLLNCVGP 98 (452)
Q Consensus 91 vVIn~aGp 98 (452)
++|+++|-
T Consensus 96 ~vid~~g~ 103 (168)
T d1uufa2 96 FILNTVAA 103 (168)
T ss_dssp EEEECCSS
T ss_pred eeeeeeec
Confidence 99999973
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=96.62 E-value=0.0043 Score=52.65 Aligned_cols=74 Identities=14% Similarity=0.153 Sum_probs=52.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
.-+++|+|++|.+|..+++.+...+. .+|+++++++++++.+ ++++. . ...|.++++..++..+
T Consensus 28 g~~vlV~G~~G~vG~~~~~~~~~~g~------~~V~~~~~~~~~~~~~-~~~Ga------~-~~i~~~~~~~~~~~~~~~ 93 (170)
T d1jvba2 28 TKTLLVVGAGGGLGTMAVQIAKAVSG------ATIIGVDVREEAVEAA-KRAGA------D-YVINASMQDPLAEIRRIT 93 (170)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTC------CEEEEEESSHHHHHHH-HHHTC------S-EEEETTTSCHHHHHHHHT
T ss_pred CCEEEEEeccccceeeeeeccccccc------ccccccccchhhHHHH-HHcCC------c-eeeccCCcCHHHHHHHHh
Confidence 35799999999999999999998873 5899999999998554 44541 2 2234444433333332
Q ss_pred ---CccEEeecCC
Q 012947 88 ---QTKLLLNCVG 97 (452)
Q Consensus 88 ---~~dvVIn~aG 97 (452)
..|+||+|+|
T Consensus 94 ~~~~~d~vid~~g 106 (170)
T d1jvba2 94 ESKGVDAVIDLNN 106 (170)
T ss_dssp TTSCEEEEEESCC
T ss_pred hcccchhhhcccc
Confidence 4799999986
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=96.61 E-value=0.013 Score=48.76 Aligned_cols=77 Identities=14% Similarity=0.117 Sum_probs=54.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC---CCCCCccEEEEeCCCHHHHHHHHc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP---SHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~---~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
.+|.|+|| |++|..++-.|+.++-. -++.+.++++++++....++.. .......+.. .|.+ .++
T Consensus 2 kKI~IIGa-G~VG~~~a~~l~~~~~~-----~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~---~d~~----~l~ 68 (146)
T d1hyha1 2 RKIGIIGL-GNVGAAVAHGLIAQGVA-----DDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVI---NDWA----ALA 68 (146)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCC-----SEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEE---SCGG----GGT
T ss_pred CeEEEECc-CHHHHHHHHHHHhcCCC-----ceEEEEecccchhhhHHHhhhccccccCCccceec---cCHH----Hhc
Confidence 47999996 99999999999988731 4899999999988766655531 0112223332 3332 368
Q ss_pred CccEEeecCCCCC
Q 012947 88 QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ~~dvVIn~aGp~~ 100 (452)
++|+||-++|...
T Consensus 69 ~adiVVitaG~~~ 81 (146)
T d1hyha1 69 DADVVISTLGNIK 81 (146)
T ss_dssp TCSEEEECCSCGG
T ss_pred cccEEEEeccccc
Confidence 9999999999543
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=96.55 E-value=0.0021 Score=53.88 Aligned_cols=92 Identities=11% Similarity=0.036 Sum_probs=60.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
|+|-|+|. |.+|+.+++.|.+++ +++.+..|+.++......+- ..+ .+ +..++++++|
T Consensus 1 MkIgiIG~-G~mG~~ia~~l~~~g-------~~v~~~~~~~~~~~~~~~~~-------~~~--~~-----~~~e~~~~~d 58 (152)
T d1i36a2 1 LRVGFIGF-GEVAQTLASRLRSRG-------VEVVTSLEGRSPSTIERART-------VGV--TE-----TSEEDVYSCP 58 (152)
T ss_dssp CEEEEESC-SHHHHHHHHHHHHTT-------CEEEECCTTCCHHHHHHHHH-------HTC--EE-----CCHHHHHTSS
T ss_pred CEEEEEcH-HHHHHHHHHHHHHCC-------CeEEEEcCchhHHHHHhhhc-------ccc--cc-----cHHHHHhhcC
Confidence 57889975 999999999999998 78888888776655444321 111 11 2356789999
Q ss_pred EEeecCCCCCCCCHHHHHHHH-HhCCcEEEecCcHHH
Q 012947 91 LLLNCVGPYRLHGDPVAAACV-HSGCDYLDISGEPEF 126 (452)
Q Consensus 91 vVIn~aGp~~~~~~~vv~ac~-~~g~~yvDlsge~~~ 126 (452)
+||.|+-+.. . ..++..+. ..+..+||++...+-
T Consensus 59 iIi~~v~~~~-~-~~~~~~~~~~~~~~~id~st~~p~ 93 (152)
T d1i36a2 59 VVISAVTPGV-A-LGAARRAGRHVRGIYVDINNISPE 93 (152)
T ss_dssp EEEECSCGGG-H-HHHHHHHHTTCCSEEEECSCCCHH
T ss_pred eEEEEecCch-H-HHHHHhhcccCCceeeccCcCCHH
Confidence 9999985322 1 23333222 234568898765443
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=96.55 E-value=0.0072 Score=50.98 Aligned_cols=65 Identities=15% Similarity=0.276 Sum_probs=48.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
|+|.|+|+ |.+|..+++.|.+.+ ++|.+.+|+.+.+++..+. + .+... .| + .+.++++|
T Consensus 1 MkI~iIG~-G~mG~~lA~~l~~~g-------~~V~~~d~~~~~~~~a~~~-~-----~~~~~-~~--~----~~~~~~~D 59 (165)
T d2f1ka2 1 MKIGVVGL-GLIGASLAGDLRRRG-------HYLIGVSRQQSTCEKAVER-Q-----LVDEA-GQ--D----LSLLQTAK 59 (165)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT-------CEEEEECSCHHHHHHHHHT-T-----SCSEE-ES--C----GGGGTTCS
T ss_pred CEEEEEee-cHHHHHHHHHHHHCC-------CEEEEEECCchHHHHHHHh-h-----cccee-ee--e----cccccccc
Confidence 57999987 999999999999988 8999999999988766542 1 11211 11 2 13568999
Q ss_pred EEeecC
Q 012947 91 LLLNCV 96 (452)
Q Consensus 91 vVIn~a 96 (452)
+||-++
T Consensus 60 iIilav 65 (165)
T d2f1ka2 60 IIFLCT 65 (165)
T ss_dssp EEEECS
T ss_pred cccccC
Confidence 999887
|
| >d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glucose-fructose oxidoreductase, N-terminal domain species: Zymomonas mobilis [TaxId: 542]
Probab=96.55 E-value=0.0086 Score=53.39 Aligned_cols=132 Identities=12% Similarity=0.057 Sum_probs=81.3
Q ss_pred CCCCCCCCeEEEEcCCchHHH-HHHHHHHHcCCCCCCCceEE-EEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHH
Q 012947 4 QSQIPELFDVIILGASGFTGK-YVVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPS 81 (452)
Q Consensus 4 ~~~~~~~~~ilV~GATG~iG~-~va~~L~~~g~~~~~~~~~v-~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~s 81 (452)
+..++++.+|-|+|+ |.+|+ +.++.+.... ..++ ++++|++++++.+.++++. ....+. ..+|
T Consensus 27 ~~~~~~~iriaiIG~-G~~~~~~~~~~~~~~~------~~~ivav~d~~~~~a~~~~~~~~i---~~~~~~--~~~d--- 91 (221)
T d1h6da1 27 PMPEDRRFGYAIVGL-GKYALNQILPGFAGCQ------HSRIEALVSGNAEKAKIVAAEYGV---DPRKIY--DYSN--- 91 (221)
T ss_dssp CCCCCCCEEEEEECC-SHHHHHTHHHHTTTCS------SEEEEEEECSCHHHHHHHHHHTTC---CGGGEE--CSSS---
T ss_pred CCCCCCCEEEEEEcC-cHHHHHHHHHHHHhCC------CceEEEEecCCHHHHHHHHHhhcc---cccccc--ccCc---
Confidence 445667899999997 78886 4556655442 1665 4889999999998887742 111222 1233
Q ss_pred HHHHHc--CccEEeecCCCCCCCCHHHHHHHHHhCCc-EEE--ecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchh
Q 012947 82 LHRLCS--QTKLLLNCVGPYRLHGDPVAAACVHSGCD-YLD--ISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPA 156 (452)
Q Consensus 82 l~~~~~--~~dvVIn~aGp~~~~~~~vv~ac~~~g~~-yvD--lsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~ 156 (452)
++++++ ++|+|+-+..+.. + ..++..|+++|.| +++ ++....-. .++.+.++++++.+..+.-+-..|.
T Consensus 92 ~~ell~~~~iD~V~I~tp~~~-H-~~~~~~al~~gk~v~~EKPla~~~~e~----~~l~~~a~~~~~~~~v~~~~r~~p~ 165 (221)
T d1h6da1 92 FDKIAKDPKIDAVYIILPNSL-H-AEFAIRAFKAGKHVMCEKPMATSVADC----QRMIDAAKAANKKLMIGYRCHYNQF 165 (221)
T ss_dssp GGGGGGCTTCCEEEECSCGGG-H-HHHHHHHHHTTCEEEECSSCCSSHHHH----HHHHHHHHHHTCCEEECCGGGGCHH
T ss_pred hhhhcccccceeeeeccchhh-h-hhHHHHhhhcchhhhcCCCccCCHHHH----HHHHHHHHhcCCcEEEeeccccCHH
Confidence 445555 5788887775543 3 5788888899987 444 22222222 3345667777776654443334443
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.49 E-value=0.0082 Score=50.95 Aligned_cols=74 Identities=18% Similarity=0.302 Sum_probs=52.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
-+|+|+|+ |.+|...++.+...|. .+|++++++++|++. .++++. -.++..+-.+.....+.+.
T Consensus 28 d~VlI~G~-G~iG~~~~~~a~~~G~------~~Vi~~d~~~~rl~~-a~~~Ga-----~~~~~~~~~~~~~~~~~~~~~~ 94 (171)
T d1pl8a2 28 HKVLVCGA-GPIGMVTLLVAKAMGA------AQVVVTDLSATRLSK-AKEIGA-----DLVLQISKESPQEIARKVEGQL 94 (171)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC------SEEEEEESCHHHHHH-HHHTTC-----SEEEECSSCCHHHHHHHHHHHH
T ss_pred CEEEEECC-CccHHHHHHHHHHcCC------ceEEeccCCHHHHHH-HHHhCC-----cccccccccccccccccccccC
Confidence 46899987 9999999999888882 389999999999964 456642 1233333445555544443
Q ss_pred --CccEEeecCC
Q 012947 88 --QTKLLLNCVG 97 (452)
Q Consensus 88 --~~dvVIn~aG 97 (452)
++|+||.|+|
T Consensus 95 g~g~Dvvid~~G 106 (171)
T d1pl8a2 95 GCKPEVTIECTG 106 (171)
T ss_dssp TSCCSEEEECSC
T ss_pred CCCceEEEeccC
Confidence 5799999987
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=96.48 E-value=0.0045 Score=51.49 Aligned_cols=128 Identities=9% Similarity=0.027 Sum_probs=72.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC---CCCCCccEEEEeCCCHHHHHHHHc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP---SHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~---~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
.+|.|+|+ |.+|..++-.|+..+- .++.+.+.++++.+....++.. .......+... .|.+ .++
T Consensus 2 ~KI~IIGa-G~VG~~~A~~l~~~~l------~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~--~d~~----~~~ 68 (142)
T d1uxja1 2 KKISIIGA-GFVGSTTAHWLAAKEL------GDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNYA----DTA 68 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC------SEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGG----GGT
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCc------ceEEEEeeccccchhHHHHhhccccccCCCCEEEec--CcHH----Hhc
Confidence 48999997 9999999999988762 5899999999887776666531 01122333322 2322 367
Q ss_pred CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhhc
Q 012947 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQW 167 (452)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~~ 167 (452)
++|+||-++|.....++.-.+... .....++++.+...+.+. +++.++ -+-|-|..++.+.+..
T Consensus 69 ~advvvitag~~~~~~~~r~dl~~----------~N~~i~~~i~~~i~k~~p-~aiviv-----vtNPvDv~t~~~~~~s 132 (142)
T d1uxja1 69 NSDVIVVTSGAPRKPGMSREDLIK----------VNADITRACISQAAPLSP-NAVIIM-----VNNPLDAMTYLAAEVS 132 (142)
T ss_dssp TCSEEEECCSCC---------CHH----------HHHHHHHHHHHHHGGGCT-TCEEEE-----CSSSHHHHHHHHHHHH
T ss_pred CCCEEEEeeeccCCcCcchhHHHh----------HHHHHHHHHHHHHhccCC-CceEEE-----eCCchHHHHHHHHHHH
Confidence 899999999965443321111100 112233333322211111 344444 3568899999887754
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.47 E-value=0.0033 Score=54.61 Aligned_cols=74 Identities=12% Similarity=0.091 Sum_probs=52.1
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHH---HHHHHHc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPP---SLHRLCS 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~---sl~~~~~ 87 (452)
-.|+|+||+|.+|...++.....|- .+|+.+.++.++...+..+++. . ...|..+++ .+++...
T Consensus 32 etVLI~gaaGgVG~~aiQlak~~Ga------~~vi~~~~~~e~~~~l~~~~ga------d-~vi~~~~~~~~~~~~~~~~ 98 (187)
T d1vj1a2 32 QTMVVSGAAGACGSLAGQIGHLLGC------SRVVGICGTQEKCLFLTSELGF------D-AAVNYKTGNVAEQLREACP 98 (187)
T ss_dssp CEEEESSTTSTTGGGHHHHHHHTTC------SEEEEEESSHHHHHHHHHHSCC------S-EEEETTSSCHHHHHHHHCT
T ss_pred CEEEEECCCchhhHHHHHHHHHcCC------cceecccchHHHHhhhhhcccc------e-EEeeccchhHHHHHHHHhc
Confidence 4699999999999999999877772 2566667788887778777752 1 344665532 2333222
Q ss_pred -CccEEeecCC
Q 012947 88 -QTKLLLNCVG 97 (452)
Q Consensus 88 -~~dvVIn~aG 97 (452)
++|+|++++|
T Consensus 99 ~GvDvv~D~vG 109 (187)
T d1vj1a2 99 GGVDVYFDNVG 109 (187)
T ss_dssp TCEEEEEESSC
T ss_pred cCceEEEecCC
Confidence 5899999987
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.45 E-value=0.0024 Score=54.47 Aligned_cols=73 Identities=14% Similarity=0.064 Sum_probs=53.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeC-CCHHHHHHHHcC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADT-TDPPSLHRLCSQ 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl-~d~~sl~~~~~~ 88 (452)
.-+++|+|+ |.+|...++.+...| .+|++++++++|++.. ++++. ..+. |. ++.+..++..+.
T Consensus 28 g~~vlI~Ga-G~vG~~a~q~ak~~G-------~~vi~~~~~~~k~~~a-~~lGa------~~~i-~~~~~~~~~~~~~~~ 91 (168)
T d1piwa2 28 GKKVGIVGL-GGIGSMGTLISKAMG-------AETYVISRSSRKREDA-MKMGA------DHYI-ATLEEGDWGEKYFDT 91 (168)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHHT-------CEEEEEESSSTTHHHH-HHHTC------SEEE-EGGGTSCHHHHSCSC
T ss_pred CCEEEEECC-CCcchhHHHHhhhcc-------ccccccccchhHHHHh-hccCC------cEEe-eccchHHHHHhhhcc
Confidence 357999987 899999998887777 7999999999998654 55642 2222 33 233445566667
Q ss_pred ccEEeecCCC
Q 012947 89 TKLLLNCVGP 98 (452)
Q Consensus 89 ~dvVIn~aGp 98 (452)
.|++|.|+|.
T Consensus 92 ~d~vi~~~~~ 101 (168)
T d1piwa2 92 FDLIVVCASS 101 (168)
T ss_dssp EEEEEECCSC
T ss_pred cceEEEEecC
Confidence 8999999874
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=96.45 E-value=0.0055 Score=52.66 Aligned_cols=73 Identities=21% Similarity=0.279 Sum_probs=49.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCH--HHH-HHHHc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDP--PSL-HRLCS 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~--~sl-~~~~~ 87 (452)
-+|+|+|| |.+|..+++.+...|. .+|+++++++++++. .++++. .. ..|..+. .+. +++.+
T Consensus 30 ~~VlV~Ga-G~iG~~~~~~ak~~Ga------~~Vi~~~~~~~~~~~-a~~lGa------~~-vi~~~~~~~~~~~~~i~~ 94 (182)
T d1vj0a2 30 KTVVIQGA-GPLGLFGVVIARSLGA------ENVIVIAGSPNRLKL-AEEIGA------DL-TLNRRETSVEERRKAIMD 94 (182)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTB------SEEEEEESCHHHHHH-HHHTTC------SE-EEETTTSCHHHHHHHHHH
T ss_pred CEEEEECC-Cccchhheeccccccc------ccccccccccccccc-cccccc------eE-EEeccccchHHHHHHHHH
Confidence 57999997 8899999999988882 389999999999854 456642 21 2344332 222 22222
Q ss_pred -----CccEEeecCCC
Q 012947 88 -----QTKLLLNCVGP 98 (452)
Q Consensus 88 -----~~dvVIn~aGp 98 (452)
++|+||+|+|.
T Consensus 95 ~~~~~g~Dvvid~vG~ 110 (182)
T d1vj0a2 95 ITHGRGADFILEATGD 110 (182)
T ss_dssp HTTTSCEEEEEECSSC
T ss_pred hhCCCCceEEeecCCc
Confidence 47999999873
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=96.38 E-value=0.027 Score=47.10 Aligned_cols=78 Identities=8% Similarity=0.022 Sum_probs=53.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC--C-CCCCccEEEEeCCCHHHHHHHHc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--S-HSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~--~-~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
.||.|+|+ |.+|..++-.|+.++- .++.+.++++++++....++.. . ...+..+...+ +. +.++
T Consensus 4 ~KI~IIGa-G~VG~~~a~~l~~~~l------~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~----~~~~ 70 (150)
T d1t2da1 4 AKIVLVGS-GMIGGVMATLIVQKNL------GDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TY----DDLA 70 (150)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC------CEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CG----GGGT
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCC------CeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--cc----cccC
Confidence 58999996 9999999976666552 5899999999887776665532 0 11233444332 32 3467
Q ss_pred CccEEeecCCCCCC
Q 012947 88 QTKLLLNCVGPYRL 101 (452)
Q Consensus 88 ~~dvVIn~aGp~~~ 101 (452)
++|+||.++|.-..
T Consensus 71 ~advvvitag~~~~ 84 (150)
T d1t2da1 71 GADVVIVTAGFTKA 84 (150)
T ss_dssp TCSEEEECCSCSSC
T ss_pred CCcEEEEecccccC
Confidence 89999999995443
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=96.38 E-value=0.0052 Score=51.41 Aligned_cols=67 Identities=18% Similarity=0.235 Sum_probs=51.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
|+|.++|+ |-+|+++++.|++.++ .++.+.+|++++++++.++++ +.. .+ +.+. ++++|
T Consensus 1 MkI~fIG~-G~MG~ai~~~l~~~~~------~~i~v~~r~~~~~~~l~~~~~------~~~--~~--~~~~----v~~~D 59 (152)
T d1yqga2 1 MNVYFLGG-GNMAAAVAGGLVKQGG------YRIYIANRGAEKRERLEKELG------VET--SA--TLPE----LHSDD 59 (152)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHCS------CEEEEECSSHHHHHHHHHHTC------CEE--ES--SCCC----CCTTS
T ss_pred CEEEEEcC-cHHHHHHHHHHHHCCC------CcEEEEeCChhHHHHhhhhcc------ccc--cc--cccc----ccccc
Confidence 57999987 9999999999999874 799999999999998887652 221 11 1121 46789
Q ss_pred EEeecCCC
Q 012947 91 LLLNCVGP 98 (452)
Q Consensus 91 vVIn~aGp 98 (452)
+||-++-|
T Consensus 60 iv~lavkP 67 (152)
T d1yqga2 60 VLILAVKP 67 (152)
T ss_dssp EEEECSCH
T ss_pred eEEEecCH
Confidence 99988754
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=96.37 E-value=0.0084 Score=51.19 Aligned_cols=73 Identities=12% Similarity=0.132 Sum_probs=50.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHH---HHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLH---RLC 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~---~~~ 86 (452)
.-+|+|+|+ |.+|..+++.+...+. .++++++++++|++.+ ++++. ..+ .|..+++..+ ++.
T Consensus 29 g~~VlI~G~-G~iG~~~~~~ak~~g~------~~v~~~~~~~~k~~~a-~~~Ga-----~~~--i~~~~~~~~~~i~~~t 93 (174)
T d1f8fa2 29 ASSFVTWGA-GAVGLSALLAAKVCGA------SIIIAVDIVESRLELA-KQLGA-----THV--INSKTQDPVAAIKEIT 93 (174)
T ss_dssp TCEEEEESC-SHHHHHHHHHHHHHTC------SEEEEEESCHHHHHHH-HHHTC-----SEE--EETTTSCHHHHHHHHT
T ss_pred CCEEEEeCC-CHHHhhhhhccccccc------ceeeeeccHHHHHHHH-HHcCC-----eEE--EeCCCcCHHHHHHHHc
Confidence 457999998 8999999999888873 4677889999998654 45642 122 3555533333 332
Q ss_pred c-CccEEeecCC
Q 012947 87 S-QTKLLLNCVG 97 (452)
Q Consensus 87 ~-~~dvVIn~aG 97 (452)
. ++|+||+|+|
T Consensus 94 ~gg~D~vid~~G 105 (174)
T d1f8fa2 94 DGGVNFALESTG 105 (174)
T ss_dssp TSCEEEEEECSC
T ss_pred CCCCcEEEEcCC
Confidence 2 4799999886
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=96.36 E-value=0.008 Score=50.84 Aligned_cols=73 Identities=21% Similarity=0.313 Sum_probs=49.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeC--CCHHHHHHHHc-
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADT--TDPPSLHRLCS- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl--~d~~sl~~~~~- 87 (452)
-+++|+| +|.+|..+++.+...| .+|++++++++|++.. ++++. . ..+..|- .+...+.+.+.
T Consensus 28 ~~vlV~G-~G~vG~~~~~~ak~~G-------a~vi~v~~~~~r~~~a-~~~ga----~-~~~~~~~~~~~~~~~~~~~~~ 93 (170)
T d1e3ja2 28 TTVLVIG-AGPIGLVSVLAAKAYG-------AFVVCTARSPRRLEVA-KNCGA----D-VTLVVDPAKEEESSIIERIRS 93 (170)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHH-HHTTC----S-EEEECCTTTSCHHHHHHHHHH
T ss_pred CEEEEEc-ccccchhhHhhHhhhc-------ccccccchHHHHHHHH-HHcCC----c-EEEeccccccccchhhhhhhc
Confidence 4689997 5889999999887777 7999999999998554 44531 1 2233332 23333333332
Q ss_pred ----CccEEeecCC
Q 012947 88 ----QTKLLLNCVG 97 (452)
Q Consensus 88 ----~~dvVIn~aG 97 (452)
++|+||+|+|
T Consensus 94 ~~g~g~D~vid~~g 107 (170)
T d1e3ja2 94 AIGDLPNVTIDCSG 107 (170)
T ss_dssp HSSSCCSEEEECSC
T ss_pred ccccCCceeeecCC
Confidence 5899999987
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=96.24 E-value=0.0036 Score=51.29 Aligned_cols=88 Identities=17% Similarity=0.177 Sum_probs=58.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEE-ecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~ia-gR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
++|.|.|++|-+|+.+++.+.+.+ +++... +++.. +.+.++
T Consensus 1 mki~i~G~~GrMG~~i~~~~~~~~-------~~l~~~id~~~~-------------------------------~~~~~~ 42 (128)
T d1vm6a3 1 MKYGIVGYSGRMGQEIQKVFSEKG-------HELVLKVDVNGV-------------------------------EELDSP 42 (128)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-------CEEEEEEETTEE-------------------------------EECSCC
T ss_pred CEEEEECCCCHHHHHHHHHHhcCC-------CeEEEEECCCcH-------------------------------HHhccC
Confidence 589999999999999999887766 565432 22110 012457
Q ss_pred cEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHh
Q 012947 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVE 140 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~ 140 (452)
|+||....|-.. ...++.|.++++..| .|...|..+.....++.++.
T Consensus 43 DVvIDFS~p~~~--~~~l~~~~~~~~p~V--iGTTG~~~~~~~~i~~~ak~ 89 (128)
T d1vm6a3 43 DVVIDFSSPEAL--PKTVDLCKKYRAGLV--LGTTALKEEHLQMLRELSKE 89 (128)
T ss_dssp SEEEECSCGGGH--HHHHHHHHHHTCEEE--ECCCSCCHHHHHHHHHHTTT
T ss_pred CEEEEecCHHHH--HHHHHHHHhcCCCEE--EEcCCCCHHHHHHHHHHHhh
Confidence 899998766433 678999999999864 33444555544555555543
|
| >d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Virulence factor MviM species: Escherichia coli [TaxId: 562]
Probab=96.22 E-value=0.021 Score=48.01 Aligned_cols=110 Identities=14% Similarity=0.115 Sum_probs=70.9
Q ss_pred CeEEEEcCCchHHHH-HHHHHHHcCCCCCCCceEE-EEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 11 FDVIILGASGFTGKY-VVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~-va~~L~~~g~~~~~~~~~v-~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
++|.|+|. |.+|+. .+..+..... +++ .+++++.++.+++.++++ +.+ .++ ++.+.++
T Consensus 2 iri~iIG~-G~~g~~~~~~~l~~~~~------~~i~~v~d~~~~~~~~~~~~~~------~~~----~~~---~~~l~~~ 61 (164)
T d1tlta1 2 LRIGVVGL-GGIAQKAWLPVLAAASD------WTLQGAWSPTRAKALPICESWR------IPY----ADS---LSSLAAS 61 (164)
T ss_dssp EEEEEECC-STHHHHTHHHHHHSCSS------EEEEEEECSSCTTHHHHHHHHT------CCB----CSS---HHHHHTT
T ss_pred CEEEEEcC-CHHHHHHHHHHHHhCCC------cEEEEEEechhHhhhhhhhccc------ccc----ccc---chhhhhh
Confidence 68999995 888875 4555554431 554 578899999988888764 121 233 4445678
Q ss_pred ccEEeecCCCCCCCCHHHHHHHHHhCCc-EEE--ecCcHHHHHHHHHHHHHHHHhCccEEE
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACVHSGCD-YLD--ISGEPEFMERMEARYHEKAVETGSLLV 146 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~~~g~~-yvD--lsge~~~~~~~~~~~~~~A~~~gv~iv 146 (452)
+|+|+-|.-+ ..+ ..++..|+++|.| +++ ++-...-. ..+.+.++++++.+.
T Consensus 62 ~D~V~I~tp~-~~h-~~~~~~al~~gk~V~~EKPla~~~~e~----~~l~~~a~~~~~~~~ 116 (164)
T d1tlta1 62 CDAVFVHSST-ASH-FDVVSTLLNAGVHVCVDKPLAENLRDA----ERLVELAARKKLTLM 116 (164)
T ss_dssp CSEEEECSCT-THH-HHHHHHHHHTTCEEEEESSSCSSHHHH----HHHHHHHHHTTCCEE
T ss_pred cccccccccc-hhc-cccccccccccceeeccccccCCHHHH----HHHHHHHHHcCCcEE
Confidence 9999877643 222 6788999999998 444 22222222 334566778887654
|
| >d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Probable oxidoreductase At4g09670 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=96.21 E-value=0.037 Score=47.22 Aligned_cols=126 Identities=13% Similarity=0.062 Sum_probs=78.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEE-EEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLA-LAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~-iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
+++|.|+|+ |.+|+..++.|..... .+++ +.+++.++++++.++.+. .....+ .+| ++++++
T Consensus 1 kiki~iIG~-G~~g~~~~~~l~~~~~------~~i~ai~d~~~~~~~~~~~~~~~--~~~~~~----~~~---~~~ll~~ 64 (184)
T d1ydwa1 1 QIRIGVMGC-ADIARKVSRAIHLAPN------ATISGVASRSLEKAKAFATANNY--PESTKI----HGS---YESLLED 64 (184)
T ss_dssp CEEEEEESC-CTTHHHHHHHHHHCTT------EEEEEEECSSHHHHHHHHHHTTC--CTTCEE----ESS---HHHHHHC
T ss_pred CeEEEEEcC-CHHHHHHHHHHHhCCC------CEEEEEEeCCccccccchhcccc--ccceee----cCc---HHHhhhc
Confidence 368999996 7889999998876542 5654 779999999888877642 111222 223 445553
Q ss_pred -CccEEeecCCCCCCCCHHHHHHHHHhCCcE-EEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcch
Q 012947 88 -QTKLLLNCVGPYRLHGDPVAAACVHSGCDY-LDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIP 155 (452)
Q Consensus 88 -~~dvVIn~aGp~~~~~~~vv~ac~~~g~~y-vDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P 155 (452)
+.|+|+-+..+. .+ ..++..|+++|.|. |+=-... ...-..++.+.++++++.+..+.-+---|
T Consensus 65 ~~iD~v~I~tp~~-~h-~~~~~~~l~~g~~v~~EKP~~~--~~~e~~~l~~~~~~~~~~~~v~~~~r~~~ 130 (184)
T d1ydwa1 65 PEIDALYVPLPTS-LH-VEWAIKAAEKGKHILLEKPVAM--NVTEFDKIVDACEANGVQIMDGTMWVHPQ 130 (184)
T ss_dssp TTCCEEEECCCGG-GH-HHHHHHHHTTTCEEEECSSCSS--SHHHHHHHHHHHHTTTCCEEECCCGGGCH
T ss_pred cccceeeecccch-hh-cchhhhhhhccceeeccccccc--CHHHHHHHHHHHHhhCCEEEEEEeeecCh
Confidence 689998776443 33 57888999999984 4321111 11122445677888888765443343444
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=96.21 E-value=0.016 Score=49.35 Aligned_cols=122 Identities=12% Similarity=0.053 Sum_probs=76.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
|+|-|+|- |.+|..+++.|++.+ ++|.+.+|++++.+++.++... ......... ..+.+.+-..+...+
T Consensus 2 MkIGvIGl-G~MG~~ma~~L~~~G-------~~V~~~dr~~~~~~~l~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~ 70 (178)
T d1pgja2 2 MDVGVVGL-GVMGANLALNIAEKG-------FKVAVFNRTYSKSEEFMKANAS--APFAGNLKA-FETMEAFAASLKKPR 70 (178)
T ss_dssp BSEEEECC-SHHHHHHHHHHHHTT-------CCEEEECSSHHHHHHHHHHTTT--STTGGGEEE-CSCHHHHHHHBCSSC
T ss_pred CEEEEEee-hHHHHHHHHHHHHCC-------CeEEEEECCHHHHHHHHHcCCc--cccccchhh-hhhhhHHHHhcccce
Confidence 67889985 999999999999998 8999999999999998887532 111122222 345567777777777
Q ss_pred EEeecCCCCCCCCHHHHHH---HHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEc
Q 012947 91 LLLNCVGPYRLHGDPVAAA---CVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVS 147 (452)
Q Consensus 91 vVIn~aGp~~~~~~~vv~a---c~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~ 147 (452)
.++-+..+.... ..++.. ....+.-+||.+...+-.... ..++.++.++..+.
T Consensus 71 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~iii~~st~~~~~~~~---~~~~l~~~~~~~ld 126 (178)
T d1pgja2 71 KALILVQAGAAT-DSTIEQLKKVFEKGDILVDTGNAHFKDQGR---RAQQLEAAGLRFLG 126 (178)
T ss_dssp EEEECCCCSHHH-HHHHHHHHHHCCTTCEEEECCCCCHHHHHH---HHHHHHTTTCEEEE
T ss_pred EEEEeecCcchh-hhhhhhhhhhccccceecccCccchhHHHH---HHHHHhhcceeEec
Confidence 777766432211 112222 223355677777554433222 23344556666654
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.21 E-value=0.0034 Score=54.26 Aligned_cols=73 Identities=15% Similarity=0.045 Sum_probs=49.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCH-HHHHHHH--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDP-PSLHRLC-- 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~-~sl~~~~-- 86 (452)
.-+|+|.||+|.+|...++.....| .+|+...++++|.+.+ ++++. +. ..|.++. ++..+..
T Consensus 32 g~~VLI~gaaGGVG~~aiQlak~~G-------a~Viat~~s~~k~~~~-~~lGa------~~-vi~~~~~~~~~~~~~~~ 96 (176)
T d1xa0a2 32 RGPVLVTGATGGVGSLAVSMLAKRG-------YTVEASTGKAAEHDYL-RVLGA------KE-VLAREDVMAERIRPLDK 96 (176)
T ss_dssp GCCEEESSTTSHHHHHHHHHHHHTT-------CCEEEEESCTTCHHHH-HHTTC------SE-EEECC---------CCS
T ss_pred CCEEEEEeccchHHHHHHHHHHHcC-------CceEEecCchHHHHHH-Hhccc------ce-eeecchhHHHHHHHhhc
Confidence 3569999999999999999988887 8999999999998554 44542 21 1244332 1111111
Q ss_pred cCccEEeecCC
Q 012947 87 SQTKLLLNCVG 97 (452)
Q Consensus 87 ~~~dvVIn~aG 97 (452)
++.|+||+++|
T Consensus 97 ~gvD~vid~vg 107 (176)
T d1xa0a2 97 QRWAAAVDPVG 107 (176)
T ss_dssp CCEEEEEECST
T ss_pred cCcCEEEEcCC
Confidence 26899999987
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=96.18 E-value=0.00061 Score=58.66 Aligned_cols=44 Identities=18% Similarity=0.070 Sum_probs=37.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhC
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWAS 62 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~ 62 (452)
-+|+|.||+|.+|...++.....| ++|+...|+++|.+.+ ++++
T Consensus 25 ~~VLV~gaaGgVG~~avQlAk~~G-------a~Viat~~s~~k~~~~-~~lG 68 (167)
T d1tt7a2 25 GSVLVTGATGGVGGIAVSMLNKRG-------YDVVASTGNREAADYL-KQLG 68 (167)
T ss_dssp CCEEEESTTSHHHHHHHHHHHHHT-------CCEEEEESSSSTHHHH-HHHT
T ss_pred CEEEEeCCcchHHHHHHHHHHHcC-------CceEEEecCHHHHHHH-Hhhc
Confidence 369999999999999999988888 8999999999998665 4453
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.16 E-value=0.0043 Score=53.56 Aligned_cols=78 Identities=18% Similarity=0.156 Sum_probs=52.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh--HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT--RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~--kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
|+|.|+|| |..|.+++..|++.+ .+|.+++|..+ ..+.+.+.-.-+ .....+...++.-..++++++++
T Consensus 1 MkI~ViGa-G~~GtalA~~la~~g-------~~V~l~~r~~~~~~~~~i~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~ 71 (180)
T d1txga2 1 MIVSILGA-GAMGSALSVPLVDNG-------NEVRIWGTEFDTEILKSISAGREHP-RLGVKLNGVEIFWPEQLEKCLEN 71 (180)
T ss_dssp CEEEEESC-CHHHHHHHHHHHHHC-------CEEEEECCGGGHHHHHHHHTTCCBT-TTTBCCCSEEEECGGGHHHHHTT
T ss_pred CEEEEECC-CHHHHHHHHHHHHCC-------CEEEEEEecccHHHHHHHhhhhhhh-hhcchhccccccccccHHHHHhc
Confidence 68999998 889999999999998 79999999544 344433221100 01111111222334678999999
Q ss_pred ccEEeecCC
Q 012947 89 TKLLLNCVG 97 (452)
Q Consensus 89 ~dvVIn~aG 97 (452)
+|+||.++.
T Consensus 72 ad~Ii~avp 80 (180)
T d1txga2 72 AEVVLLGVS 80 (180)
T ss_dssp CSEEEECSC
T ss_pred cchhhcccc
Confidence 999999884
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=96.11 E-value=0.002 Score=55.82 Aligned_cols=72 Identities=15% Similarity=0.063 Sum_probs=49.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-Cc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-QT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-~~ 89 (452)
-+++|+||+|.+|...++.....| ++|+...|+++|.+.+ ++++. + ...|.++++..+.+.+ ..
T Consensus 33 ~~vlV~gasGGVG~~aiQlAk~~G-------a~Via~~~~~~k~~~~-~~lGa------d-~vi~~~~~~~~~~l~~~~~ 97 (177)
T d1o89a2 33 GEIVVTGASGGVGSTAVALLHKLG-------YQVVAVSGRESTHEYL-KSLGA------S-RVLPRDEFAESRPLEKQVW 97 (177)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT-------CCEEEEESCGGGHHHH-HHHTE------E-EEEEGGGSSSCCSSCCCCE
T ss_pred CcEEEEEccccchHHHHHHHHHcC-------CCeEEEecchhHHHHH-Hhhcc------c-cccccccHHHHHHHHhhcC
Confidence 479999999999999999998888 8999999999997554 45542 2 2234433222122222 24
Q ss_pred cEEeecCC
Q 012947 90 KLLLNCVG 97 (452)
Q Consensus 90 dvVIn~aG 97 (452)
|.+|+++|
T Consensus 98 ~~vvD~Vg 105 (177)
T d1o89a2 98 AGAIDTVG 105 (177)
T ss_dssp EEEEESSC
T ss_pred CeeEEEcc
Confidence 77777775
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=96.06 E-value=0.022 Score=47.70 Aligned_cols=48 Identities=21% Similarity=0.225 Sum_probs=38.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEE--EecChhHHHHHHHHhC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLAL--AGRNPTRVKQALQWAS 62 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~i--agR~~~kl~~l~~~l~ 62 (452)
+.+|.|+|+||-||+...+-+.++.+ .++|.. +.+|.+++.+...++.
T Consensus 2 pK~I~IlGsTGSIG~~tL~Vi~~~~d-----~f~v~~lsa~~N~~~L~~q~~ef~ 51 (150)
T d1r0ka2 2 PRTVTVLGATGSIGHSTLDLIERNLD-----RYQVIALTANRNVKDLADAAKRTN 51 (150)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTGG-----GEEEEEEEESSCHHHHHHHHHHTT
T ss_pred CcEEEEECCCcHHHHHHHHHHHcCCC-----CcEEEEEEeCCCHHHHHHHHHhhc
Confidence 56899999999999999999887642 266643 5688899988888874
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=96.05 E-value=0.0049 Score=52.90 Aligned_cols=72 Identities=15% Similarity=0.188 Sum_probs=50.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCH---HHHHHHHc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDP---PSLHRLCS 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~---~sl~~~~~ 87 (452)
-+|+|+|+ |.+|...++.+...|. .+|++++++++|++.. ++++. .. ..|..++ +.+.+...
T Consensus 29 ~~VlI~Ga-G~vGl~~~q~ak~~Ga------~~Vi~~d~~~~r~~~a-~~lGa-----~~--~i~~~~~~~~~~v~~~t~ 93 (174)
T d1jqba2 29 SSVVVIGI-GAVGLMGIAGAKLRGA------GRIIGVGSRPICVEAA-KFYGA-----TD--ILNYKNGHIEDQVMKLTN 93 (174)
T ss_dssp CCEEEECC-SHHHHHHHHHHHTTTC------SCEEEECCCHHHHHHH-HHHTC-----SE--EECGGGSCHHHHHHHHTT
T ss_pred CEEEEEcC-Ccchhhhhhhhhcccc------cccccccchhhhHHHH-HhhCc-----cc--cccccchhHHHHHHHHhh
Confidence 46999987 8999999999887773 4799999999997544 55642 12 2344332 33444443
Q ss_pred --CccEEeecCC
Q 012947 88 --QTKLLLNCVG 97 (452)
Q Consensus 88 --~~dvVIn~aG 97 (452)
++|+||.|+|
T Consensus 94 g~G~D~vid~~g 105 (174)
T d1jqba2 94 GKGVDRVIMAGG 105 (174)
T ss_dssp TSCEEEEEECSS
T ss_pred ccCcceEEEccC
Confidence 4899999997
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=96.02 E-value=0.00085 Score=57.50 Aligned_cols=124 Identities=20% Similarity=0.212 Sum_probs=69.3
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEE-EecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHH
Q 012947 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLAL-AGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 8 ~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~i-agR~~~kl~~l~~~l~~-~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
+..++|.|.||+|-+|+.+++.+.+... +++.. .+|..... +-+.++. .......+.. ..+++..
T Consensus 2 ~s~ikI~i~Ga~GrMG~~i~~~i~~~~~------~~lv~~~~~~~~~~--~g~d~~~~~~~~~~~~~~-----~~~~~~~ 68 (162)
T d1diha1 2 DANIRVAIAGAGGRMGRQLIQAALALEG------VQLGAALEREGSSL--LGSDAGELAGAGKTGVTV-----QSSLDAV 68 (162)
T ss_dssp CCBEEEEETTTTSHHHHHHHHHHHHSTT------EECCCEECCTTCTT--CSCCTTCSSSSSCCSCCE-----ESCSTTT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCC------CEEEEEEecccchh--ccchhhhhhccccCCcee-----eccHHHH
Confidence 3468999999999999999999988752 55533 34432211 0011110 0001111111 1223456
Q ss_pred HcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEE-ecCcHHHHHHHHHHHHHHHHhCccEEEcCCCC
Q 012947 86 CSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLD-ISGEPEFMERMEARYHEKAVETGSLLVSACGF 151 (452)
Q Consensus 86 ~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvD-lsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~ 151 (452)
++.+||||...-|-. ....++.|.+.++.+|- .|| |..+-.....+.+++ +.|+.+.-|
T Consensus 69 ~~~~DViIDFs~p~~--~~~~~~~a~~~~~~~ViGTTG---~~~~~~~~i~~~a~~--ipi~~apN~ 128 (162)
T d1diha1 69 KDDFDVFIDFTRPEG--TLNHLAFCRQHGKGMVIGTTG---FDEAGKQAIRDAAAD--IAIVFAANF 128 (162)
T ss_dssp TTSCSEEEECSCHHH--HHHHHHHHHHTTCEEEECCCC---CCHHHHHHHHHHTTT--SCEEECSCC
T ss_pred hcccceEEEeccHHH--HHHHHHHHHhccceeEEecCC---CcHHHHHHHHHHcCC--CCEEEEccc
Confidence 678999999875532 25688999999998654 333 333333444554444 334444444
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=96.01 E-value=0.0051 Score=45.71 Aligned_cols=43 Identities=19% Similarity=0.104 Sum_probs=36.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQAL 58 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~ 58 (452)
+..+++|+||+|.+|...++.+...| ++|+...++++|.+.+.
T Consensus 31 ~~~~vlI~gasGgVG~~aiQlak~~G-------~~Vi~~t~s~~k~~~~~ 73 (77)
T d1o8ca2 31 QDGEIVVTGASGGVGSTAVALLHKLG-------YQVVAVSGRESTHEYLK 73 (77)
T ss_dssp GGCEEEESSTTSHHHHHHHHHHHHTT-------CCEEEEESCGGGHHHHH
T ss_pred CCCcEEEEeCCCcHHHHHHHHHHHcC-------CeEEEEECCHHHHHHHH
Confidence 45679999999999999999888777 89999999999986543
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=95.91 E-value=0.012 Score=53.11 Aligned_cols=103 Identities=18% Similarity=0.199 Sum_probs=69.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC-------------------hhHHHHHHHHhCCCCCCCcc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASPSHSLSIP 70 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~-------------------~~kl~~l~~~l~~~~~~~v~ 70 (452)
+.+|+|+|+ |.+|..++.+|++.|. -++.+++.+ ..|.+.+.+.+.. ..+.+.
T Consensus 30 ~~~VliiG~-GglGs~va~~La~~Gv------g~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~-~np~~~ 101 (247)
T d1jw9b_ 30 DSRVLIVGL-GGLGCAASQYLASAGV------GNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTR-INPHIA 101 (247)
T ss_dssp HCEEEEECC-SHHHHHHHHHHHHHTC------SEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHH-HCTTSE
T ss_pred CCCEEEECC-CHHHHHHHHHHHHcCC------CeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHH-hhcccc
Confidence 468999997 7799999999999994 478887743 1244444443321 123455
Q ss_pred EEEEeC-CCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEec
Q 012947 71 ILTADT-TDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 71 ~v~~Dl-~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDls 121 (452)
+...+. -+.+.+.......|+||.+...+. ....+-+.|.+.++.+|.-.
T Consensus 102 i~~~~~~~~~~~~~~~~~~~divid~~d~~~-~~~~in~~~~~~~ip~i~g~ 152 (247)
T d1jw9b_ 102 ITPVNALLDDAELAALIAEHDLVLDCTDNVA-VRNQLNAGCFAAKVPLVSGA 152 (247)
T ss_dssp EEEECSCCCHHHHHHHHHTSSEEEECCSSHH-HHHHHHHHHHHHTCCEEEEE
T ss_pred hhhhhhhhhhccccccccccceeeeccchhh-hhhhHHHHHHHhCCCccccc
Confidence 554443 245667778889999999875432 22567788888888888654
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=95.88 E-value=0.0028 Score=53.19 Aligned_cols=74 Identities=19% Similarity=0.173 Sum_probs=49.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
|+|.|+|+ |.+|.+++.+|++.| ++|.+..|+.++.+.... .. ............++. +....+|
T Consensus 1 MkI~IiGa-G~iG~~~a~~L~~~G-------~~V~~~~r~~~~~~~~~~-~~--~~~~~~~~~~~~~~~----~~~~~~D 65 (167)
T d1ks9a2 1 MKITVLGC-GALGQLWLTALCKQG-------HEVQGWLRVPQPYCSVNL-VE--TDGSIFNESLTANDP----DFLATSD 65 (167)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT-------CEEEEECSSCCSEEEEEE-EC--TTSCEEEEEEEESCH----HHHHTCS
T ss_pred CEEEEECc-CHHHHHHHHHHHHCC-------CceEEEEcCHHHhhhhcc-cc--CCccccccccccchh----hhhcccc
Confidence 68999999 999999999999998 899999998875532211 11 011111112222333 3345789
Q ss_pred EEeecCCCC
Q 012947 91 LLLNCVGPY 99 (452)
Q Consensus 91 vVIn~aGp~ 99 (452)
+||.++-++
T Consensus 66 ~iii~vka~ 74 (167)
T d1ks9a2 66 LLLVTLKAW 74 (167)
T ss_dssp EEEECSCGG
T ss_pred eEEEeeccc
Confidence 999988544
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=95.84 E-value=0.0032 Score=55.02 Aligned_cols=74 Identities=11% Similarity=0.144 Sum_probs=53.1
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCC-CCCCcc---EEEEeCCCHHHHHHHH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIP---ILTADTTDPPSLHRLC 86 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~-~~~~v~---~v~~Dl~d~~sl~~~~ 86 (452)
.+|.|+|| |..|.+++..|++.+ .+|.+.+|+++.++++.+.-..+ ..+++. -+.+ ..++++++
T Consensus 8 ~KI~ViGa-G~wGtAlA~~La~~g-------~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~----t~~l~~a~ 75 (189)
T d1n1ea2 8 NKAVVFGS-GAFGTALAMVLSKKC-------REVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITF----TSDVEKAY 75 (189)
T ss_dssp EEEEEECC-SHHHHHHHHHHHTTE-------EEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEE----ESCHHHHH
T ss_pred ceEEEECC-CHHHHHHHHHHHHcC-------CeEEEEEecHHHHHHHhhccccccccccccccccccc----chhhhhcc
Confidence 36999998 778999999999987 79999999999988776542110 011111 1111 13478889
Q ss_pred cCccEEeecC
Q 012947 87 SQTKLLLNCV 96 (452)
Q Consensus 87 ~~~dvVIn~a 96 (452)
+++|+||-++
T Consensus 76 ~~ad~iiiav 85 (189)
T d1n1ea2 76 NGAEIILFVI 85 (189)
T ss_dssp TTCSCEEECS
T ss_pred CCCCEEEEcC
Confidence 9999999887
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.84 E-value=0.025 Score=46.45 Aligned_cols=102 Identities=17% Similarity=0.176 Sum_probs=64.1
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEE-ecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~ia-gR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
||.|.||+|-+|+.+++.+.+... +++... ++.. .+ ..+ ...++|
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~~------~~l~~~~d~~~-~~-------------------------~~~--~~~~~D 46 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAADD------LTLSAELDAGD-PL-------------------------SLL--TDGNTE 46 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTT------SEEEEEECTTC-CT-------------------------HHH--HTTTCS
T ss_pred CEEEECCCCHHHHHHHHHHHhCCC------CEEEEEEecCC-ch-------------------------hhh--ccccCC
Confidence 689999999999999999887652 565432 2210 00 000 113689
Q ss_pred EEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHH-HHhCccEEEcCCCC
Q 012947 91 LLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEK-AVETGSLLVSACGF 151 (452)
Q Consensus 91 vVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~-A~~~gv~iv~~~G~ 151 (452)
+||...-|-.. ...++.|.+.++..|- |...|..+-++..++. ++.+++.++-+.-|
T Consensus 47 vvIDFS~p~~~--~~~~~~~~~~~~~~Vi--GTTG~~~~~~~~l~~~~~~~~~ipil~apNf 104 (135)
T d1yl7a1 47 VVIDFTHPDVV--MGNLEFLIDNGIHAVV--GTTGFTAERFQQVESWLVAKPNTSVLIAPNF 104 (135)
T ss_dssp EEEECCCTTTH--HHHHHHHHHTTCEEEE--CCCCCCHHHHHHHHHHHHSCTTCEEEECSCC
T ss_pred EEEEcccHHHH--HHHHHHHHhcCCCEEE--eccccchhHHHHHHHHHHhcCCCCEEEcCCc
Confidence 99998866432 5789999999998653 4444544333444443 34456666655555
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=95.72 E-value=0.02 Score=48.53 Aligned_cols=72 Identities=17% Similarity=0.167 Sum_probs=48.1
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCC--HHHHHHHHc-
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTD--PPSLHRLCS- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d--~~sl~~~~~- 87 (452)
-.|+|+|+ |.+|...++.+...+. .++++++++++|++.+. +++ ...+ .|..+ .+.+.+...
T Consensus 34 ~~vli~Ga-G~vG~~~~~~a~~~g~------~~vv~~~~~~~k~~~~~-~~g-----a~~~--i~~~~~~~~~~~~~~~~ 98 (172)
T d1h2ba2 34 AYVAIVGV-GGLGHIAVQLLKVMTP------ATVIALDVKEEKLKLAE-RLG-----ADHV--VDARRDPVKQVMELTRG 98 (172)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHCC------CEEEEEESSHHHHHHHH-HTT-----CSEE--EETTSCHHHHHHHHTTT
T ss_pred CEEEEeCC-ChHHHHHHHHHHhhcC------cccccccchhHHHHHHh-hcc-----ccee--ecCcccHHHHHHHhhCC
Confidence 46888876 9999999999888873 57888999999986554 443 1223 34332 222333222
Q ss_pred -CccEEeecCC
Q 012947 88 -QTKLLLNCVG 97 (452)
Q Consensus 88 -~~dvVIn~aG 97 (452)
++|+||+|+|
T Consensus 99 ~g~d~vid~~g 109 (172)
T d1h2ba2 99 RGVNVAMDFVG 109 (172)
T ss_dssp CCEEEEEESSC
T ss_pred CCceEEEEecC
Confidence 4799999987
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=95.55 E-value=0.012 Score=50.92 Aligned_cols=77 Identities=12% Similarity=0.115 Sum_probs=56.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEE-------E--------
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPIL-------T-------- 73 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v-------~-------- 73 (452)
++-+++|+|| |-.|...++-....| .+|.+.+.+.++++++.+.... .+.+. .
T Consensus 28 ~pa~VvViGa-GvaG~~Aa~~A~~lG-------A~V~v~D~~~~~~~~l~~l~~~----~i~~~~~~~~~~~~~~gyA~~ 95 (183)
T d1l7da1 28 PPARVLVFGV-GVAGLQAIATAKRLG-------AVVMATDVRAATKEQVESLGGK----FITVDDEAMKTAETAGGYAKE 95 (183)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTT-------CEEEEECSCSTTHHHHHHTTCE----ECCC-----------------
T ss_pred CCcEEEEEcC-cHHHHHHHHHHHHcC-------CEEEEEeccHHHHHHHHHhhcc----eEEEeccccccccccccchhh
Confidence 4668999998 899999999999998 8999999999998877653321 11100 0
Q ss_pred ----EeCCCHHHHHHHHcCccEEeecCC
Q 012947 74 ----ADTTDPPSLHRLCSQTKLLLNCVG 97 (452)
Q Consensus 74 ----~Dl~d~~sl~~~~~~~dvVIn~aG 97 (452)
.-..+.+.+.+.++++|+||.++=
T Consensus 96 ~s~~~~~~~~~~l~~~l~~aDlVI~tal 123 (183)
T d1l7da1 96 MGEEFRKKQAEAVLKELVKTDIAITTAL 123 (183)
T ss_dssp ------CCHHHHHHHHHTTCSEEEECCC
T ss_pred cCHHHHHHHHHHHHHHHHhhhhheeeee
Confidence 001234677888999999999984
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=95.50 E-value=0.078 Score=44.17 Aligned_cols=99 Identities=17% Similarity=0.177 Sum_probs=62.4
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEE--EEecChhHHHHHHHHhCCCCCCCccEEEE-e-------------
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLA--LAGRNPTRVKQALQWASPSHSLSIPILTA-D------------- 75 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~--iagR~~~kl~~l~~~l~~~~~~~v~~v~~-D------------- 75 (452)
+|.|+|+||-||+...+-+.++.+ .++|. .+++|.+++.+...++.. ..+.. |
T Consensus 3 ~I~IlGsTGSIG~~tL~Vi~~~~d-----~f~v~~Lsa~~N~~~L~~q~~~f~p------k~v~i~d~~~~~~l~~~l~~ 71 (151)
T d1q0qa2 3 QLTILGSTGSIGCSTLDVVRHNPE-----HFRVVALVAGKNVTRMVEQCLEFSP------RYAVMDDEASAKLLKTMLQQ 71 (151)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTT-----TEEEEEEEESSCHHHHHHHHHHHCC------SEEEESSHHHHHHHHHHHHH
T ss_pred eEEEEcCCcHHHHHHHHHHHhCCC-----CcEEEEEEecCcHHHHHHHHHHHhh------cccccccHHHHHHHHHHhhh
Confidence 699999999999999999877642 16654 467889999988888852 22221 1
Q ss_pred -------CCCHHHHHHHHc--CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCc
Q 012947 76 -------TTDPPSLHRLCS--QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGE 123 (452)
Q Consensus 76 -------l~d~~sl~~~~~--~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge 123 (452)
+..++++.+++. ++|+|++...- ..|..-.-++++.|....=.+=|
T Consensus 72 ~~~~~~~~~g~~~l~~~~~~~~~D~vi~AI~G--~aGL~~t~~aik~gk~iaLANKE 126 (151)
T d1q0qa2 72 QGSRTEVLSGQQAACDMAALEDVDQVMAAIVG--AAGLLPTLAAIRAGKTILLANKD 126 (151)
T ss_dssp TTCCCEEEESHHHHHHHHTCTTCCEEEECCSS--GGGHHHHHHHHHTTCEEEECCHC
T ss_pred hccccccccChHHHHHHhcCCCCCEEEEecCc--ccHHHHHHHHHhcCCeEEEEccH
Confidence 112345555444 46888886532 23444555566666554433334
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=95.47 E-value=0.026 Score=42.86 Aligned_cols=88 Identities=18% Similarity=0.163 Sum_probs=58.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+|+|+|. |-+|+.++++|.+++ .+|.+.+.+.... ..+++. ..+....... +.+ .+.+.
T Consensus 5 ~K~v~ViGl-G~sG~s~a~~L~~~g-------~~v~~~D~~~~~~--~~~~~~----~~~~~~~~~~-~~~----~~~~~ 65 (93)
T d2jfga1 5 GKNVVIIGL-GLTGLSCVDFFLARG-------VTPRVMDTRMTPP--GLDKLP----EAVERHTGSL-NDE----WLMAA 65 (93)
T ss_dssp TCCEEEECC-SHHHHHHHHHHHHTT-------CCCEEEESSSSCT--TGGGSC----TTSCEEESBC-CHH----HHHHC
T ss_pred CCEEEEEeE-CHHHHHHHHHHHHCC-------CEEEEeeCCcCch--hHHHHh----hccceeeccc-chh----hhccC
Confidence 457999999 789999999999998 7899998855421 112221 2344444443 322 34567
Q ss_pred cEEeecCCCCCCCCHHHHHHHHHhCCcEE
Q 012947 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYL 118 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~~~g~~yv 118 (452)
|.||-.-|. ....++++.+.+.|+..|
T Consensus 66 d~vi~SPGi--~~~~~~~~~a~~~gi~ii 92 (93)
T d2jfga1 66 DLIVASPGI--ALAHPSLSAAADAGIEIV 92 (93)
T ss_dssp SEEEECTTS--CTTSHHHHHHHHTTCEEE
T ss_pred CEEEECCCC--CCCCHHHHHHHHcCCCeE
Confidence 999887664 344578888888776543
|
| >d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative oxidoreductase VCA1048 species: Vibrio cholerae [TaxId: 666]
Probab=95.46 E-value=0.023 Score=47.79 Aligned_cols=111 Identities=16% Similarity=0.125 Sum_probs=70.3
Q ss_pred CeEEEEcCCchHHHH-HHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 11 FDVIILGASGFTGKY-VVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~-va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
++|.|+|+ |.+|+. ....|.+.. ..++++++++.++++.+.++++. ..+ .+|.+++-+ .++
T Consensus 2 irvgiiG~-G~~~~~~~~~~l~~~~------~~~~~~~d~~~~~~~~~~~~~~~------~~~---~~~~~~ll~--~~i 63 (167)
T d1xeaa1 2 LKIAMIGL-GDIAQKAYLPVLAQWP------DIELVLCTRNPKVLGTLATRYRV------SAT---CTDYRDVLQ--YGV 63 (167)
T ss_dssp EEEEEECC-CHHHHHTHHHHHTTST------TEEEEEECSCHHHHHHHHHHTTC------CCC---CSSTTGGGG--GCC
T ss_pred eEEEEEcC-CHHHHHHHHHHHHhCC------CcEEEEEECCHHHHHHHHHhccc------ccc---cccHHHhcc--ccc
Confidence 68999997 677865 455555443 27888999999999999887742 111 123222221 378
Q ss_pred cEEeecCCCCCCCCHHHHHHHHHhCCcE-EEe--cCcHHHHHHHHHHHHHHHHhCccEE
Q 012947 90 KLLLNCVGPYRLHGDPVAAACVHSGCDY-LDI--SGEPEFMERMEARYHEKAVETGSLL 145 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~~~g~~y-vDl--sge~~~~~~~~~~~~~~A~~~gv~i 145 (452)
|+|+-|..+. .+ ..++..|++.|.|. ++= +-...-. ..+.+.+++++..+
T Consensus 64 D~V~I~tp~~-~H-~~~~~~al~~gk~V~~EKP~~~~~~e~----~~l~~~a~~~~~~~ 116 (167)
T d1xeaa1 64 DAVMIHAATD-VH-STLAAFFLHLGIPTFVDKPLAASAQEC----ENLYELAEKHHQPL 116 (167)
T ss_dssp SEEEECSCGG-GH-HHHHHHHHHTTCCEEEESCSCSSHHHH----HHHHHHHHHTTCCE
T ss_pred ceeccccccc-cc-ccccccccccccccccCCCCcCCHHHH----HHHHHHHHHcCCEE
Confidence 9998776443 33 67899999999983 432 2222222 33456677777664
|
| >d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=95.42 E-value=0.022 Score=47.53 Aligned_cols=105 Identities=15% Similarity=0.209 Sum_probs=62.8
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCccE
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKL 91 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~dv 91 (452)
+|-++|- |.+|..+++.|++.+ + ..+..|+.++.+++.++.+. ..+ . .+.+.++|+
T Consensus 2 kIg~IGl-G~MG~~ma~~L~~~g-------~-~~~~~~~~~~~~~~~~~~~~---------~~~--~----~~~~~~~~~ 57 (156)
T d2cvza2 2 KVAFIGL-GAMGYPMAGHLARRF-------P-TLVWNRTFEKALRHQEEFGS---------EAV--P----LERVAEARV 57 (156)
T ss_dssp CEEEECC-STTHHHHHHHHHTTS-------C-EEEECSSTHHHHHHHHHHCC---------EEC--C----GGGGGGCSE
T ss_pred eEEEEeH-HHHHHHHHHHHHhCC-------C-EEEEeCCHHHHHHHHHHcCC---------ccc--c----cccccceeE
Confidence 5788886 999999999999877 4 34789999988887776531 011 1 133345677
Q ss_pred EeecCCCCCCCCHHHHHHHH---H---hCCcEEEecCcHH-HHHHHHHHHHHHHHhCccEEEcC
Q 012947 92 LLNCVGPYRLHGDPVAAACV---H---SGCDYLDISGEPE-FMERMEARYHEKAVETGSLLVSA 148 (452)
Q Consensus 92 VIn~aGp~~~~~~~vv~ac~---~---~g~~yvDlsge~~-~~~~~~~~~~~~A~~~gv~iv~~ 148 (452)
+|.+.- ....+..... . .+..+||++...+ ..+++ .+..++.|+.++-+
T Consensus 58 ~i~~~~----~~~~v~~~~~~l~~~~~~~~~iid~sT~~p~~~~~~----~~~~~~~gi~~lda 113 (156)
T d2cvza2 58 IFTCLP----TTREVYEVAEALYPYLREGTYWVDATSGEPEASRRL----AERLREKGVTYLDA 113 (156)
T ss_dssp EEECCS----SHHHHHHHHHHHTTTCCTTEEEEECSCCCHHHHHHH----HHHHHTTTEEEEEC
T ss_pred EEeccc----chhhhhhhhccccccccccccccccccCCHHHHHHH----HHHHHHcCCeEEec
Confidence 766652 1122222221 1 2345788765433 33333 45566678777744
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=95.40 E-value=0.033 Score=47.13 Aligned_cols=75 Identities=11% Similarity=0.075 Sum_probs=48.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEE-EEeCCC-HHHHHHHH--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPIL-TADTTD-PPSLHRLC-- 86 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v-~~Dl~d-~~sl~~~~-- 86 (452)
-.|+|+|| |.+|...+..+...+. .+|++++++++|++.. .+++. ...+ ..|..| .+.+.+..
T Consensus 30 dtVlV~Ga-GG~G~~~~~~~~~~g~------~~Vi~~~~~~~k~~~a-~~~Ga-----~~~i~~~~~~~~~~~~~~~~~~ 96 (176)
T d2jhfa2 30 STCAVFGL-GGVGLSVIMGCKAAGA------ARIIGVDINKDKFAKA-KEVGA-----TECVNPQDYKKPIQEVLTEMSN 96 (176)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC------SEEEEECSCGGGHHHH-HHTTC-----SEEECGGGCSSCHHHHHHHHTT
T ss_pred CEEEEECC-CCcHHHHHHHHHHcCC------ceEEeecCcHHHHHHH-HHhCC-----eeEEecCCchhHHHHHHHHHhc
Confidence 46999999 5689999999998873 6899999999998644 44431 1111 112222 12222222
Q ss_pred cCccEEeecCCC
Q 012947 87 SQTKLLLNCVGP 98 (452)
Q Consensus 87 ~~~dvVIn~aGp 98 (452)
.++|++|.++|.
T Consensus 97 ~G~D~vid~~G~ 108 (176)
T d2jhfa2 97 GGVDFSFEVIGR 108 (176)
T ss_dssp SCBSEEEECSCC
T ss_pred CCCCEEEecCCc
Confidence 257899888874
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=95.23 E-value=0.025 Score=47.72 Aligned_cols=73 Identities=10% Similarity=0.097 Sum_probs=48.1
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCC-CHHHHHHHH---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTT-DPPSLHRLC--- 86 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~-d~~sl~~~~--- 86 (452)
-.|+|.|+ |.+|...++.+...+. .+|++++++++|++ +.++++. ..++ |.. +.+.+.+.+
T Consensus 30 ~tVlI~Ga-GGvG~~aiq~ak~~G~------~~vi~~~~~~~k~~-~ak~lGa-----~~~i--~~~~~~~~~~~~~~~~ 94 (176)
T d2fzwa2 30 SVCAVFGL-GGVGLAVIMGCKVAGA------SRIIGVDINKDKFA-RAKEFGA-----TECI--NPQDFSKPIQEVLIEM 94 (176)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC------SEEEEECSCGGGHH-HHHHHTC-----SEEE--CGGGCSSCHHHHHHHH
T ss_pred CEEEEecc-hhHHHHHHHHHHHHhc------CceEEEcccHHHHH-HHHHhCC-----cEEE--eCCchhhHHHHHHHHH
Confidence 46899998 5789999999998883 47888888998874 5566752 1222 221 112222222
Q ss_pred --cCccEEeecCCC
Q 012947 87 --SQTKLLLNCVGP 98 (452)
Q Consensus 87 --~~~dvVIn~aGp 98 (452)
.++|+||.++|.
T Consensus 95 ~~~g~D~vid~~G~ 108 (176)
T d2fzwa2 95 TDGGVDYSFECIGN 108 (176)
T ss_dssp TTSCBSEEEECSCC
T ss_pred cCCCCcEeeecCCC
Confidence 258999998873
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.17 E-value=0.038 Score=46.23 Aligned_cols=44 Identities=20% Similarity=0.059 Sum_probs=35.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWAS 62 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~ 62 (452)
.-+|+|+|+ |.+|..+++.+...| .+|+++++++++++.. ++++
T Consensus 28 g~~VlV~Ga-G~vG~~~~~~ak~~G-------~~Vi~~~~~~~~~~~a-~~~G 71 (166)
T d1llua2 28 GQWVAISGI-GGLGHVAVQYARAMG-------LHVAAIDIDDAKLELA-RKLG 71 (166)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTT-------CEEEEEESCHHHHHHH-HHTT
T ss_pred CCEEEEeec-cccHHHHHHHHHHcC-------CccceecchhhHHHhh-hccC
Confidence 357899887 889999998877777 7999999999998654 4554
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=95.13 E-value=0.042 Score=47.67 Aligned_cols=74 Identities=20% Similarity=0.200 Sum_probs=50.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCH---HHHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDP---PSLHRLC 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~---~sl~~~~ 86 (452)
.-+|+|+|| |.+|...++.+...+. .+|++++++++|++. .++++ ... ..|..+. +.+.++.
T Consensus 26 G~tVlV~Ga-G~vGl~a~~~ak~~ga------~~Vi~~d~~~~rl~~-a~~~G------a~~-~~~~~~~~~~~~i~~~t 90 (195)
T d1kola2 26 GSTVYVAGA-GPVGLAAAASARLLGA------AVVIVGDLNPARLAH-AKAQG------FEI-ADLSLDTPLHEQIAALL 90 (195)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTC------SEEEEEESCHHHHHH-HHHTT------CEE-EETTSSSCHHHHHHHHH
T ss_pred CCEEEEECc-CHHHHHHHHHHHhhcc------cceeeecccchhhHh-hhhcc------ccE-EEeCCCcCHHHHHHHHh
Confidence 357999987 8999888888777762 589999999999854 45553 222 2333332 3344444
Q ss_pred c--CccEEeecCCC
Q 012947 87 S--QTKLLLNCVGP 98 (452)
Q Consensus 87 ~--~~dvVIn~aGp 98 (452)
. ++|++|.++|.
T Consensus 91 ~g~g~D~vid~vG~ 104 (195)
T d1kola2 91 GEPEVDCAVDAVGF 104 (195)
T ss_dssp SSSCEEEEEECCCT
T ss_pred CCCCcEEEEECccc
Confidence 3 58999999984
|
| >d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0312 species: Thermotoga maritima [TaxId: 2336]
Probab=95.03 E-value=0.18 Score=42.69 Aligned_cols=115 Identities=11% Similarity=0.137 Sum_probs=72.8
Q ss_pred CCeEEEEcCCchHHHH-HHHHHHHcCCCCCCCceEE-EEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 10 LFDVIILGASGFTGKY-VVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~-va~~L~~~g~~~~~~~~~v-~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
+++|.|+|+ |.+|+. .++.+.+... ..++ .+++|+.++++.+.+.++ ...+. +| ++++++
T Consensus 3 kirigiIG~-G~~g~~~h~~~l~~~~~-----~~~i~~v~d~~~~~~~~~~~~~~------~~~~~---~~---~~ell~ 64 (181)
T d1zh8a1 3 KIRLGIVGC-GIAARELHLPALKNLSH-----LFEITAVTSRTRSHAEEFAKMVG------NPAVF---DS---YEELLE 64 (181)
T ss_dssp CEEEEEECC-SHHHHHTHHHHHHTTTT-----TEEEEEEECSSHHHHHHHHHHHS------SCEEE---SC---HHHHHH
T ss_pred CcEEEEEcC-CHHHHHHHHHHHHhCCC-----CeEEEEEEeccHhhhhhhhcccc------cccee---ee---eecccc
Confidence 578999996 888976 4666655431 1454 478999999988888763 12221 23 455565
Q ss_pred --CccEEeecCCCCCCCCHHHHHHHHHhCCc-EEEecCcHHHHHHHHHHHHHHHHhCccEEE
Q 012947 88 --QTKLLLNCVGPYRLHGDPVAAACVHSGCD-YLDISGEPEFMERMEARYHEKAVETGSLLV 146 (452)
Q Consensus 88 --~~dvVIn~aGp~~~~~~~vv~ac~~~g~~-yvDlsge~~~~~~~~~~~~~~A~~~gv~iv 146 (452)
++|+|+-+..+. .+ ..++..|+++|.| +++=-.... ..+ ..++.+.++++++.+.
T Consensus 65 ~~~id~v~I~tp~~-~h-~~~~~~al~~gk~V~~EKPl~~~-~~e-~~~l~~~~~~~~~~~~ 122 (181)
T d1zh8a1 65 SGLVDAVDLTLPVE-LN-LPFIEKALRKGVHVICEKPISTD-VET-GKKVVELSEKSEKTVY 122 (181)
T ss_dssp SSCCSEEEECCCGG-GH-HHHHHHHHHTTCEEEEESSSSSS-HHH-HHHHHHHHHHCSSCEE
T ss_pred ccccceeecccccc-cc-ccccccccccchhhhcCCCCcCC-HHH-HHHHHHHHHHhCCeEE
Confidence 579888776443 33 6788999999987 443221111 122 2445677888887654
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=94.98 E-value=0.0096 Score=52.17 Aligned_cols=76 Identities=16% Similarity=0.219 Sum_probs=52.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCc----------cEEEEeCCCHH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSI----------PILTADTTDPP 80 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v----------~~v~~Dl~d~~ 80 (452)
|+|.|+|. ||+|..++..|++.| ++|.+.+.|.++++.+.+.......... ..+.+ ..
T Consensus 1 MkI~ViGl-G~vGl~~a~~la~~g-------~~V~g~D~n~~~i~~ln~g~~p~~e~~~~~~l~~~~~~~~~~~----~~ 68 (202)
T d1mv8a2 1 MRISIFGL-GYVGAVCAGCLSARG-------HEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSG----TT 68 (202)
T ss_dssp CEEEEECC-STTHHHHHHHHHHTT-------CEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE----ES
T ss_pred CEEEEECC-CHhHHHHHHHHHhCC-------CcEEEEeCCHHHHHHhcccCCcccchhhhhhhhhhhccccccc----CC
Confidence 57999976 999999999999998 7999999999998877643210000000 00000 12
Q ss_pred HHHHHHcCccEEeecCCC
Q 012947 81 SLHRLCSQTKLLLNCVGP 98 (452)
Q Consensus 81 sl~~~~~~~dvVIn~aGp 98 (452)
++.++++.+|+++-|++.
T Consensus 69 ~~~~~i~~~d~i~i~VpT 86 (202)
T d1mv8a2 69 DFKKAVLDSDVSFICVGT 86 (202)
T ss_dssp CHHHHHHTCSEEEECCCC
T ss_pred CHHHHHhhCCEEEEecCc
Confidence 356677889999999963
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=94.92 E-value=0.011 Score=51.08 Aligned_cols=38 Identities=24% Similarity=0.206 Sum_probs=33.9
Q ss_pred CCCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh
Q 012947 6 QIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP 51 (452)
Q Consensus 6 ~~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~ 51 (452)
+|+.+|||+|+|| |..|..+|.+|++.| ++|.|+.++.
T Consensus 1 ~m~~~yDviViGa-G~~Gl~~A~~La~~G-------~~V~vlE~~~ 38 (297)
T d2bcgg1 1 TIDTDYDVIVLGT-GITECILSGLLSVDG-------KKVLHIDKQD 38 (297)
T ss_dssp CCCCBCSEEEECC-SHHHHHHHHHHHHTT-------CCEEEECSSS
T ss_pred CCCCcCCEEEECc-CHHHHHHHHHHHHCC-------CCEEEEcCCC
Confidence 3677899999997 999999999999998 8999998864
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=94.90 E-value=0.0064 Score=52.71 Aligned_cols=40 Identities=20% Similarity=0.171 Sum_probs=31.5
Q ss_pred CeEEEE-cCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHH
Q 012947 11 FDVIIL-GASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQA 57 (452)
Q Consensus 11 ~~ilV~-GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l 57 (452)
-+++|. ||+|.+|..+++.....| ++++++.|+.++.++.
T Consensus 30 ~~vli~~ga~g~vG~~aiqlAk~~G-------a~vI~~v~~~~~~~~~ 70 (189)
T d1gu7a2 30 KDWFIQNGGTSAVGKYASQIGKLLN-------FNSISVIRDRPNLDEV 70 (189)
T ss_dssp TCEEEESCTTSHHHHHHHHHHHHHT-------CEEEEEECCCTTHHHH
T ss_pred CEEEEEeCCCchHHHHHHHHHhhcC-------CeEEEEEecccccchH
Confidence 457775 899999999999988888 8988888876655443
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=94.79 E-value=0.07 Score=41.79 Aligned_cols=87 Identities=13% Similarity=0.042 Sum_probs=56.3
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhH-HHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR-VKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~k-l~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
+..+|+|+|+ |-+|..-++.|++.+ .++.+....... +..+.+ ..++.++.-+.++ +.++
T Consensus 11 ~~k~vlVvG~-G~va~~ka~~ll~~g-------a~v~v~~~~~~~~~~~~~~------~~~i~~~~~~~~~-----~dl~ 71 (113)
T d1pjqa1 11 RDRDCLIVGG-GDVAERKARLLLEAG-------ARLTVNALTFIPQFTVWAN------EGMLTLVEGPFDE-----TLLD 71 (113)
T ss_dssp BTCEEEEECC-SHHHHHHHHHHHHTT-------BEEEEEESSCCHHHHHHHT------TTSCEEEESSCCG-----GGGT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCC-------CeEEEEeccCChHHHHHHh------cCCceeeccCCCH-----HHhC
Confidence 4568999998 889999999999998 788888765543 333332 2456666655543 2356
Q ss_pred CccEEeecCCCCCCCCHHHHHHHHHhCC
Q 012947 88 QTKLLLNCVGPYRLHGDPVAAACVHSGC 115 (452)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~ac~~~g~ 115 (452)
++++|+.+.+-- .....+.+.|.+.++
T Consensus 72 ~~~lv~~at~d~-~~n~~i~~~a~~~~i 98 (113)
T d1pjqa1 72 SCWLAIAATDDD-TVNQRVSDAAESRRI 98 (113)
T ss_dssp TCSEEEECCSCH-HHHHHHHHHHHHTTC
T ss_pred CCcEEeecCCCH-HHHHHHHHHHHHcCC
Confidence 788888775421 112345555555443
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=94.74 E-value=0.029 Score=45.16 Aligned_cols=68 Identities=15% Similarity=0.173 Sum_probs=54.0
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-HcCcc
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQTK 90 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~-~~~~d 90 (452)
.++|+|. |-+|+.+++.|.. ..+.+...++++.+.+.+ .++.++.+|.+|++.|+++ +++++
T Consensus 2 HivI~G~-g~~g~~l~~~L~~---------~~i~vi~~d~~~~~~~~~-------~~~~~i~Gd~~~~~~L~~a~i~~A~ 64 (129)
T d2fy8a1 2 HVVICGW-SESTLECLRELRG---------SEVFVLAEDENVRKKVLR-------SGANFVHGDPTRVSDLEKANVRGAR 64 (129)
T ss_dssp CEEEESC-CHHHHHHHHTSCG---------GGEEEEESCTTHHHHHHH-------TTCEEEESCTTSHHHHHHTTCTTCS
T ss_pred EEEEECC-CHHHHHHHHHHcC---------CCCEEEEcchHHHHHHHh-------cCccccccccCCHHHHHHhhhhcCc
Confidence 4788886 7789999999843 356778899988876644 3578999999999999876 67899
Q ss_pred EEeecC
Q 012947 91 LLLNCV 96 (452)
Q Consensus 91 vVIn~a 96 (452)
.+|-+.
T Consensus 65 ~vi~~~ 70 (129)
T d2fy8a1 65 AVIVNL 70 (129)
T ss_dssp EEEECC
T ss_pred EEEEec
Confidence 998776
|
| >d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Alpha-glucosidase AglA species: Thermotoga maritima [TaxId: 2336]
Probab=94.67 E-value=0.07 Score=45.33 Aligned_cols=144 Identities=13% Similarity=0.113 Sum_probs=78.3
Q ss_pred CCeEEEEcCCchHHHH--HHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC---CCCCCccEEEEeCCCHHHHHH
Q 012947 10 LFDVIILGASGFTGKY--VVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP---SHSLSIPILTADTTDPPSLHR 84 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~--va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~---~~~~~v~~v~~Dl~d~~sl~~ 84 (452)
.+||.|+|| |.+|.. ++..|+.... . ...++++.++++++++.....+.. .......+... +| .++
T Consensus 2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~--l-~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~--td---~~e 72 (171)
T d1obba1 2 SVKIGIIGA-GSAVFSLRLVSDLCKTPG--L-SGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKT--MN---LDD 72 (171)
T ss_dssp CCEEEEETT-TCHHHHHHHHHHHHTCGG--G-TTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEE--SC---HHH
T ss_pred CcEEEEECC-CHHHhHHHHHHHHHhccc--c-CCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEe--CC---hhh
Confidence 479999998 666653 4445554321 0 014899999999988654333211 01123333322 23 667
Q ss_pred HHcCccEEeecCCCCCCCC-HHHHHHHHHhCC------cEEEecC---------cHHHHHHHHHHHHHHHHhCccEEEcC
Q 012947 85 LCSQTKLLLNCVGPYRLHG-DPVAAACVHSGC------DYLDISG---------EPEFMERMEARYHEKAVETGSLLVSA 148 (452)
Q Consensus 85 ~~~~~dvVIn~aGp~~~~~-~~vv~ac~~~g~------~yvDlsg---------e~~~~~~~~~~~~~~A~~~gv~iv~~ 148 (452)
+++++|+||++++.....+ +.......+.|. ...|+.| ..+.++++++...+.+. .+++++-
T Consensus 73 aL~dad~Vv~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~~p--~a~~i~~ 150 (171)
T d1obba1 73 VIIDADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSP--KAWYLQA 150 (171)
T ss_dssp HHTTCSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCT--TCEEEEC
T ss_pred cccCCCeEeeecccccccceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHHCc--CeEEEEE
Confidence 8899999999987533211 111222223322 1233333 23444555444443332 4454433
Q ss_pred CCCCcchhhHHHHHHhhhcC
Q 012947 149 CGFDSIPAELGVMFNSRQWI 168 (452)
Q Consensus 149 ~G~~s~P~dl~~~~~~~~~~ 168 (452)
+-|-|+.++.+.+...
T Consensus 151 ----TNPvdv~t~~~~k~~~ 166 (171)
T d1obba1 151 ----ANPIFEGTTLVTRTVP 166 (171)
T ss_dssp ----SSCHHHHHHHHHHHSC
T ss_pred ----CChHHHHHHHHHHhcC
Confidence 4688999998888764
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=94.51 E-value=0.081 Score=44.91 Aligned_cols=75 Identities=12% Similarity=0.090 Sum_probs=49.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCC--HHHHHHHH-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTD--PPSLHRLC- 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d--~~sl~~~~- 86 (452)
.-+|+|+|+ |.+|...++.+...|. .+|++.+++++|+ ++.++++. ..++...-.| .+.+.+..
T Consensus 29 G~~VlV~G~-G~iGl~a~~~ak~~Ga------~~Vi~~d~~~~r~-~~a~~~Ga-----~~~i~~~~~~~~~~~~~~~~~ 95 (174)
T d1e3ia2 29 GSTCAVFGL-GCVGLSAIIGCKIAGA------SRIIAIDINGEKF-PKAKALGA-----TDCLNPRELDKPVQDVITELT 95 (174)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTC------SEEEEECSCGGGH-HHHHHTTC-----SEEECGGGCSSCHHHHHHHHH
T ss_pred CCEEEEECC-ChHHHHHHHHHHHhCC------ceeeeeccchHHH-HHHHHhCC-----CcccCCccchhhhhhhHhhhh
Confidence 357999986 9999999999998883 4788999999997 55666642 1222111111 12222222
Q ss_pred -cCccEEeecCC
Q 012947 87 -SQTKLLLNCVG 97 (452)
Q Consensus 87 -~~~dvVIn~aG 97 (452)
.++|+||.|+|
T Consensus 96 ~~G~d~vie~~G 107 (174)
T d1e3ia2 96 AGGVDYSLDCAG 107 (174)
T ss_dssp TSCBSEEEESSC
T ss_pred cCCCcEEEEecc
Confidence 36889988886
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=94.43 E-value=0.052 Score=44.71 Aligned_cols=37 Identities=19% Similarity=0.221 Sum_probs=33.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRV 54 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl 54 (452)
.+|.|+|+.|.+|+.+++.|.+.| ++|.+.+|+....
T Consensus 10 ~kI~iIGg~G~mG~~la~~L~~~G-------~~V~~~d~~~~~~ 46 (152)
T d2pv7a2 10 HKIVIVGGYGKLGGLFARYLRASG-------YPISILDREDWAV 46 (152)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTT-------CCEEEECTTCGGG
T ss_pred CeEEEEcCCCHHHHHHHHHHHHcC-------CCcEecccccccc
Confidence 579999999999999999999998 8999999976543
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=94.42 E-value=0.089 Score=44.66 Aligned_cols=75 Identities=11% Similarity=0.112 Sum_probs=50.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEE-EeCCC-HHHHHHHH--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILT-ADTTD-PPSLHRLC-- 86 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~-~Dl~d-~~sl~~~~-- 86 (452)
-.|+|+|+ |.+|...++.+...+. .+|++++++++|++ +..+++. . .++- -|-++ .+.+.+..
T Consensus 31 ~tVlI~G~-GgvGl~ai~~ak~~G~------~~Vi~vd~~~~kl~-~Ak~~GA----~-~~in~~~~~~~~~~~~~~~~g 97 (176)
T d1d1ta2 31 STCVVFGL-GGVGLSVIMGCKSAGA------SRIIGIDLNKDKFE-KAMAVGA----T-ECISPKDSTKPISEVLSEMTG 97 (176)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC------SEEEEECSCGGGHH-HHHHHTC----S-EEECGGGCSSCHHHHHHHHHT
T ss_pred CEEEEECC-CchhHHHHHHHHHcCC------ceEEEecCcHHHHH-HHHhcCC----c-EEECccccchHHHHHHHHhcc
Confidence 46889987 8999999999998873 58999999999995 5566652 1 1211 12221 23333333
Q ss_pred cCccEEeecCCC
Q 012947 87 SQTKLLLNCVGP 98 (452)
Q Consensus 87 ~~~dvVIn~aGp 98 (452)
.+.|++|.++|.
T Consensus 98 ~G~d~vi~~~g~ 109 (176)
T d1d1ta2 98 NNVGYTFEVIGH 109 (176)
T ss_dssp SCCCEEEECSCC
T ss_pred ccceEEEEeCCc
Confidence 358888888763
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=94.35 E-value=0.088 Score=44.57 Aligned_cols=44 Identities=9% Similarity=0.014 Sum_probs=36.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhC
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWAS 62 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~ 62 (452)
-+|+|+|+ |.+|...++.+...+. .+|++++++++|++. .++++
T Consensus 29 ~~VlV~Ga-GgvGl~a~~~ak~~G~------~~Vi~~d~~~~kl~~-a~~lG 72 (174)
T d1p0fa2 29 STCAVFGL-GGVGFSAIVGCKAAGA------SRIIGVGTHKDKFPK-AIELG 72 (174)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC------SEEEEECSCGGGHHH-HHHTT
T ss_pred CEEEEECC-CchhHHHHHHHHHcCC------ceeeccCChHHHHHH-HHHcC
Confidence 46999997 8999999999998883 589999999999954 45564
|
| >d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=94.26 E-value=0.037 Score=47.02 Aligned_cols=146 Identities=14% Similarity=0.084 Sum_probs=76.3
Q ss_pred CeEEEEcCC-chHHHHHHHHHHHcCCCCCCCceEEEEEecChhH--HHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHH
Q 012947 11 FDVIILGAS-GFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR--VKQALQWASP-SHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 11 ~~ilV~GAT-G~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~k--l~~l~~~l~~-~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
++|.|+||. .+++..++..+..... . ..-++.+.++++++ ++.+-..... ....+..+.....+| ..+.+
T Consensus 2 ~KI~iIGaGs~~~~~~~~~l~~~~~~--~-~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~~~td---~~~al 75 (169)
T d1s6ya1 2 LKIATIGGGSSYTPELVEGLIKRYHE--L-PVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLD---RRRAL 75 (169)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHTTTT--C-CEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESC---HHHHH
T ss_pred cEEEEECCChhhHHHHHHHHHHhccc--c-CCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceeeecCC---chhhc
Confidence 689999983 3555666665554431 0 11489999998754 4332211000 000122333333344 35678
Q ss_pred cCccEEeecCCCCCCCCH-HHHHHHHHhCCcEEEecCcHHHH---------HHHHHHHHHHHHhCccEEEcCCCCCcchh
Q 012947 87 SQTKLLLNCVGPYRLHGD-PVAAACVHSGCDYLDISGEPEFM---------ERMEARYHEKAVETGSLLVSACGFDSIPA 156 (452)
Q Consensus 87 ~~~dvVIn~aGp~~~~~~-~vv~ac~~~g~~yvDlsge~~~~---------~~~~~~~~~~A~~~gv~iv~~~G~~s~P~ 156 (452)
+++|+||+++|.-...+. .......+.|..+-+..|+..+. +++.....+.+ -.+++++ -+-|-
T Consensus 76 ~gaDvVv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~--pda~~i~----vtNPv 149 (169)
T d1s6ya1 76 DGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELC--PDAWLIN----FTNPA 149 (169)
T ss_dssp TTCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHC--TTCEEEE----CSSSH
T ss_pred CCCCEEEEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcC--CCeEEEE----eCChH
Confidence 899999999986543221 22222334455444444443222 22222222222 2444443 25688
Q ss_pred hHHHHHHhhhcC
Q 012947 157 ELGVMFNSRQWI 168 (452)
Q Consensus 157 dl~~~~~~~~~~ 168 (452)
|..++.+.|...
T Consensus 150 dv~t~~~~k~~p 161 (169)
T d1s6ya1 150 GMVTEAVLRYTK 161 (169)
T ss_dssp HHHHHHHHHHCC
T ss_pred HHHHHHHHHHCC
Confidence 999999998863
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=94.15 E-value=0.051 Score=42.89 Aligned_cols=86 Identities=16% Similarity=0.153 Sum_probs=60.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..+|.|+|| |.+|+.++....+.| +++.+.+.+++.-.. . ..-..+.+|.+|.+.+.+++.
T Consensus 11 ~~kigIlGg-GQL~rMla~aA~~lG-------~~v~v~d~~~~~PA~---~------va~~~i~~~~~d~~~l~~~~~~~ 73 (111)
T d1kjqa2 11 ATRVMLLGS-GELGKEVAIECQRLG-------VEVIAVDRYADAPAM---H------VAHRSHVINMLDGDALRRVVELE 73 (111)
T ss_dssp CCEEEEESC-SHHHHHHHHHHHTTT-------CEEEEEESSTTCGGG---G------GSSEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEEeC-CHHHHHHHHHHHHCC-------CEEEEEcCCCCCchh---h------cCCeEEECCCCCHHHHHHHHHhh
Confidence 358999996 899999999988888 899999987764211 1 122678899999999999885
Q ss_pred CccEEeecCCCCCCCCHHHHHHHHHhCC
Q 012947 88 QTKLLLNCVGPYRLHGDPVAAACVHSGC 115 (452)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~ac~~~g~ 115 (452)
++|+|..- +..-....++.+.+.|+
T Consensus 74 ~~DviT~E---~EnI~~~~L~~le~~g~ 98 (111)
T d1kjqa2 74 KPHYIVPE---IEAIATDMLIQLEEEGL 98 (111)
T ss_dssp CCSEEEEC---SSCSCHHHHHHHHHTTC
T ss_pred CCceEEEE---ecCcCHHHHHHHHHCCC
Confidence 57888432 12222445555544443
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=94.11 E-value=0.017 Score=51.99 Aligned_cols=37 Identities=19% Similarity=0.325 Sum_probs=33.2
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh
Q 012947 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP 51 (452)
Q Consensus 7 ~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~ 51 (452)
|.+++||+|+|| |.+|..+|.+|+++| .+|+|+.|+.
T Consensus 1 m~~~~DvvIIGa-Gi~Gls~A~~La~~G-------~~V~vlE~~~ 37 (276)
T d1ryia1 1 MKRHYEAVVIGG-GIIGSAIAYYLAKEN-------KNTALFESGT 37 (276)
T ss_dssp CCSEEEEEEECC-SHHHHHHHHHHHHTT-------CCEEEECSSS
T ss_pred CCccCCEEEECc-CHHHHHHHHHHHHCC-------CcEEEEeCCC
Confidence 456799999998 999999999999998 7999999864
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=94.03 E-value=0.18 Score=41.91 Aligned_cols=97 Identities=13% Similarity=0.061 Sum_probs=60.4
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCccE
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKL 91 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~dv 91 (452)
+|.|+|. |.+|..+++.|.+.+. ..+|...+|+.+.++...+. ..+....-+.. .....++|+
T Consensus 3 ~I~IIG~-G~mG~sla~~L~~~g~-----~~~I~~~D~~~~~~~~a~~~------~~~~~~~~~~~-----~~~~~~~dl 65 (171)
T d2g5ca2 3 NVLIVGV-GFMGGSFAKSLRRSGF-----KGKIYGYDINPESISKAVDL------GIIDEGTTSIA-----KVEDFSPDF 65 (171)
T ss_dssp EEEEESC-SHHHHHHHHHHHHTTC-----CSEEEEECSCHHHHHHHHHT------TSCSEEESCGG-----GGGGTCCSE
T ss_pred EEEEEcc-CHHHHHHHHHHHhcCC-----CeEEEEEECChHHHHHHHHh------hcchhhhhhhh-----hhhcccccc
Confidence 5999986 9999999999999873 15888899999988776652 12222222211 122347899
Q ss_pred EeecCCCCCCCCHHHHHHHHH---hCCcEEEecCcHHHH
Q 012947 92 LLNCVGPYRLHGDPVAAACVH---SGCDYLDISGEPEFM 127 (452)
Q Consensus 92 VIn~aGp~~~~~~~vv~ac~~---~g~~yvDlsge~~~~ 127 (452)
||-|+-|.. . ..+++.... .++-.+|+++.-..+
T Consensus 66 Iila~p~~~-~-~~vl~~l~~~~~~~~ii~d~~s~k~~~ 102 (171)
T d2g5ca2 66 VMLSSPVRT-F-REIAKKLSYILSEDATVTDQGSVKGKL 102 (171)
T ss_dssp EEECSCHHH-H-HHHHHHHHHHSCTTCEEEECCSCCTHH
T ss_pred ccccCCchh-h-hhhhhhhhccccccccccccccccHHH
Confidence 999884321 1 233333222 344577777654433
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=93.49 E-value=0.085 Score=43.81 Aligned_cols=71 Identities=11% Similarity=0.035 Sum_probs=46.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCC---HHHHHHHHc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTD---PPSLHRLCS 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d---~~sl~~~~~ 87 (452)
-+|+|.|+ |.+|...++.+...+ .+|.+++++++|++.+ ++++. ..+ .|..+ .+.+.+...
T Consensus 29 ~~vlv~G~-G~iG~~a~~~a~~~g-------~~v~~~~~~~~r~~~~-k~~Ga------~~~-~~~~~~~~~~~~~~~~~ 92 (168)
T d1rjwa2 29 EWVAIYGI-GGLGHVAVQYAKAMG-------LNVVAVDIGDEKLELA-KELGA------DLV-VNPLKEDAAKFMKEKVG 92 (168)
T ss_dssp CEEEEECC-STTHHHHHHHHHHTT-------CEEEEECSCHHHHHHH-HHTTC------SEE-ECTTTSCHHHHHHHHHS
T ss_pred CEEEEeec-ccchhhhhHHHhcCC-------CeEeccCCCHHHhhhh-hhcCc------cee-cccccchhhhhcccccC
Confidence 46888875 889999888888777 7899999999998654 44542 222 23322 233455555
Q ss_pred CccEEeecCC
Q 012947 88 QTKLLLNCVG 97 (452)
Q Consensus 88 ~~dvVIn~aG 97 (452)
+.+.+|.+++
T Consensus 93 ~~~~~v~~~~ 102 (168)
T d1rjwa2 93 GVHAAVVTAV 102 (168)
T ss_dssp SEEEEEESSC
T ss_pred CCceEEeecC
Confidence 6666665553
|
| >d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM1727 species: Thermotoga maritima [TaxId: 2336]
Probab=93.46 E-value=0.0045 Score=51.59 Aligned_cols=61 Identities=10% Similarity=0.138 Sum_probs=39.1
Q ss_pred EEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCccEEee
Q 012947 15 ILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKLLLN 94 (452)
Q Consensus 15 V~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~dvVIn 94 (452)
++| +|.+|+.+++.|.+.+ ....+.+|+.++++++.++... . ..+ +.++++++|+||-
T Consensus 4 fIG-~G~mg~~l~~~L~~~~-------~~~~v~~R~~~~~~~l~~~~~~----~-------~~~---~~~~~~~~DiVil 61 (153)
T d2i76a2 4 FVG-TGTLTRFFLECLKDRY-------EIGYILSRSIDRARNLAEVYGG----K-------AAT---LEKHPELNGVVFV 61 (153)
T ss_dssp EES-CCHHHHHHHHTTC-----------CCCEECSSHHHHHHHHHHTCC----C-------CCS---SCCCCC---CEEE
T ss_pred EEe-CcHHHHHHHHHHHhCC-------CEEEEEeCChhhhcchhhcccc----c-------ccc---hhhhhccCcEEEE
Confidence 455 5999999999886544 2335789999999999887641 0 111 2345678999999
Q ss_pred cCC
Q 012947 95 CVG 97 (452)
Q Consensus 95 ~aG 97 (452)
|+-
T Consensus 62 ~v~ 64 (153)
T d2i76a2 62 IVP 64 (153)
T ss_dssp CSC
T ss_pred ecc
Confidence 984
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.35 E-value=0.063 Score=46.44 Aligned_cols=42 Identities=14% Similarity=0.215 Sum_probs=36.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQW 60 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~ 60 (452)
.+|.|+|| |.+|+.+|..+++.| ++|.+.+++++.+++..+.
T Consensus 5 kkvaViGa-G~mG~~iA~~~a~~G-------~~V~l~D~~~~~l~~a~~~ 46 (192)
T d1f0ya2 5 KHVTVIGG-GLMGAGIAQVAAATG-------HTVVLVDQTEDILAKSKKG 46 (192)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT-------CEEEEECSCHHHHHHHHHH
T ss_pred EEEEEECc-CHHHHHHHHHHHhCC-------CcEEEEECChHHHHHHHhh
Confidence 37999998 999999999999998 8999999999877655443
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.89 E-value=0.043 Score=53.70 Aligned_cols=93 Identities=9% Similarity=0.070 Sum_probs=57.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC-------------------hhHHHHHHHHhCC-CCCCCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASP-SHSLSI 69 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~-------------------~~kl~~l~~~l~~-~~~~~v 69 (452)
..+|+|+|+ |.+|..+++.|+..|- -++.+++.+ ..|.+.+.+.+.. ....++
T Consensus 37 ~~kVlvvG~-GglG~ei~k~L~~~Gv------g~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i 109 (426)
T d1yovb1 37 TCKVLVIGA-GGLGCELLKNLALSGF------RQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNV 109 (426)
T ss_dssp HCCEEEECS-STTHHHHHHHHHTTTC------CCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCC
T ss_pred cCeEEEECC-CHHHHHHHHHHHHcCC------CeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCce
Confidence 457999999 6699999999999983 367777653 1233333333321 112334
Q ss_pred cEEEEeCCCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHH
Q 012947 70 PILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVH 112 (452)
Q Consensus 70 ~~v~~Dl~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~ 112 (452)
..+..++.+. -...+++.|+||++...+.. ...+-+.|..
T Consensus 110 ~~~~~~i~~~--~~~~~~~~DlVi~~~Dn~~a-R~~in~~c~~ 149 (426)
T d1yovb1 110 VPHFNKIQDF--NDTFYRQFHIIVCGLDSIIA-RRWINGMLIS 149 (426)
T ss_dssp EEECSCGGGB--CHHHHTTCSEEEECCSCHHH-HHHHHHHHHH
T ss_pred Eeeeccccch--HHHHHHhcchheeccCcHHH-HHHHHHHHHH
Confidence 4444444332 24678899999998864322 1345566764
|
| >d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Thermotoga maritima [TaxId: 2336]
Probab=92.87 E-value=0.31 Score=40.65 Aligned_cols=146 Identities=10% Similarity=0.098 Sum_probs=74.4
Q ss_pred CeEEEEcCCchHHHHHH-HHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 11 FDVIILGASGFTGKYVV-REALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va-~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
+||.|+||.+ +|...+ ..|++... .. ...++++.+.++++++...+...........+. .. ++ ..+.++++
T Consensus 1 mKIaiIGaGs-~g~~~~~~~l~~~~~-~~-~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~-~t-~~---~~~~l~~a 72 (162)
T d1up7a1 1 MRIAVIGGGS-SYTPELVKGLLDISE-DV-RIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVL-IS-DT---FEGAVVDA 72 (162)
T ss_dssp CEEEEETTTC-TTHHHHHHHHHHHTT-TS-CCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEE-EC-SS---HHHHHTTC
T ss_pred CEEEEECCCH-HHHHHHHHHHHhccc-cc-CccEEEEEecCcHHHHHHHHHHHhhhccCceEE-Ee-cC---cccccCCC
Confidence 5899999954 554444 33443221 00 114899999999998754432211001122322 22 22 45678999
Q ss_pred cEEeecCCCCCCCCH-HHHHHHHHhCCcEEEecCcHHHHHHH--HHHH---HHHH-HhCccEEEcCCCCCcchhhHHHHH
Q 012947 90 KLLLNCVGPYRLHGD-PVAAACVHSGCDYLDISGEPEFMERM--EARY---HEKA-VETGSLLVSACGFDSIPAELGVMF 162 (452)
Q Consensus 90 dvVIn~aGp~~~~~~-~vv~ac~~~g~~yvDlsge~~~~~~~--~~~~---~~~A-~~~gv~iv~~~G~~s~P~dl~~~~ 162 (452)
|+||.++|+-...+. .......+.++..=+..|...+...+ ++.+ .+.. ....+++++- +-|-|+.++.
T Consensus 73 DvVVita~~~~~~~~~r~~~i~~~~~i~~~~~~g~~g~~~~~r~~~~~~~i~~~~~~~p~a~~i~v----tNPvdiit~~ 148 (162)
T d1up7a1 73 KYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTSNATIVNF----TNPSGHITEF 148 (162)
T ss_dssp SEEEECCCTTHHHHHHHHHHGGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEC----SSSHHHHHHH
T ss_pred CEEEEecccCCCCCcchHhhhhhhcCeeeeeccCcchhhhhhhhhHHHHHHhhhhccCCCeEEEEe----CCHHHHHHHH
Confidence 999999986433222 22222333344332233333222111 1111 1111 1235555533 4688999998
Q ss_pred HhhhcC
Q 012947 163 NSRQWI 168 (452)
Q Consensus 163 ~~~~~~ 168 (452)
+.+...
T Consensus 149 ~~~~~p 154 (162)
T d1up7a1 149 VRNYLE 154 (162)
T ss_dssp HHHTTC
T ss_pred HHHhCC
Confidence 888863
|
| >d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=92.78 E-value=0.34 Score=40.91 Aligned_cols=98 Identities=17% Similarity=0.149 Sum_probs=60.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEE-EEecChhHHHHHHHHhCCCCCCCccEEEEeCC-----------C
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLA-LAGRNPTRVKQALQWASPSHSLSIPILTADTT-----------D 78 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~-iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~-----------d 78 (452)
++|-|-|- |-||+.+++.+..+.. .+++ +-+.++......+...+ ......+-. .
T Consensus 3 irIaINGf-GRIGR~v~Ral~~~~d------ieiVaINd~~~~~~~~~l~~~~------~~~~~~~~~~~~~~~~~~~~~ 69 (172)
T d2czca2 3 VKVGVNGY-GTIGKRVAYAVTKQDD------MELIGITKTKPDFEAYRAKELG------IPVYAASEEFIPRFEKEGFEV 69 (172)
T ss_dssp EEEEEECC-SHHHHHHHHHHHTCTT------EEEEEEEESSCSHHHHHHHHTT------CCEEESSGGGHHHHHHHTCCC
T ss_pred EEEEEECC-CHHHHHHHHHHHhCCC------ceEEEEecCCChHHHHHhhhcC------ceeecccccceeeecccCccc
Confidence 57899885 9999999999987652 5554 45555443333333221 222222111 1
Q ss_pred HHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCc
Q 012947 79 PPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGE 123 (452)
Q Consensus 79 ~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge 123 (452)
...+..+.+++|+||-|.|.|.. ..-.+...++|+..|-++++
T Consensus 70 ~~~~~~~~~~vDvViEcTG~f~~--~~~~~~hl~~G~k~Vi~s~~ 112 (172)
T d2czca2 70 AGTLNDLLEKVDIIVDATPGGIG--AKNKPLYEKAGVKAIFQGGE 112 (172)
T ss_dssp SCBHHHHHTTCSEEEECCSTTHH--HHHHHHHHHHTCEEEECTTS
T ss_pred cchhhhhhccCCEEEECCCCCCC--HHHHHHHHHcCCCEEEECCC
Confidence 12345556689999999987753 34456677777777777765
|
| >d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain species: Pyrococcus horikoshii [TaxId: 53953]
Probab=92.51 E-value=0.068 Score=43.27 Aligned_cols=111 Identities=18% Similarity=0.166 Sum_probs=69.0
Q ss_pred CCCeEEEEcCC---chHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 012947 9 ELFDVIILGAS---GFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 9 ~~~~ilV~GAT---G~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
++..|.|+||| +..|..+.+.|.+.+. .+|..+..+.+.+. .+. ..-+++| +
T Consensus 7 ~PksIAVVGaS~~~~~~g~~v~~~L~~~~~------g~v~pVnP~~~~i~------------G~~-~y~sl~d------l 61 (129)
T d2csua1 7 NPKGIAVIGASNDPKKLGYEVFKNLKEYKK------GKVYPVNIKEEEVQ------------GVK-AYKSVKD------I 61 (129)
T ss_dssp SCSEEEEETCCSCTTSHHHHHHHHHTTCCS------SEEEEECSSCSEET------------TEE-CBSSTTS------C
T ss_pred CCCeEEEEccCCCCCCcHHHHHHHHHHcCC------CcEEEeccCccccC------------CeE-eecchhh------c
Confidence 35689999999 8899999999876542 57776665432220 111 1112322 2
Q ss_pred HcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEe-c-C--cH-HHHHHHHHHHHHHHHhCccEEE
Q 012947 86 CSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDI-S-G--EP-EFMERMEARYHEKAVETGSLLV 146 (452)
Q Consensus 86 ~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDl-s-g--e~-~~~~~~~~~~~~~A~~~gv~iv 146 (452)
=..+|+++-++.+- .-..+++.|.+.|++.+-+ + | |. .--..+..+..+.|++.|+.++
T Consensus 62 p~~vDlvvi~vp~~--~~~~~~~~~~~~g~~~~vi~s~Gf~e~~~~~~~~~~~l~~~a~~~girv~ 125 (129)
T d2csua1 62 PDEIDLAIIVVPKR--FVKDTLIQCGEKGVKGVVIITAGFGETGEEGKREEKELVEIAHKYGMRII 125 (129)
T ss_dssp SSCCSEEEECSCHH--HHHHHHHHHHHHTCCEEEECCCSSTTSCHHHHHHHHHHHHHHHHHTCEEE
T ss_pred CCCCceEEEecChH--HhHHHHHHHHHcCCCEEEEecccccccchhhHHHHHHHHHHHHHcCCEEe
Confidence 23689888887432 2267899999999985433 2 2 11 1223344556778888898887
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.44 E-value=0.14 Score=43.05 Aligned_cols=65 Identities=12% Similarity=0.189 Sum_probs=48.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
.+++|+| +|.+|+.+|+.+...+ .+|.+..+++-+.-+ +.+. ... ...+++++..+|
T Consensus 25 k~v~V~G-yG~iG~g~A~~~rg~G-------~~V~v~e~dp~~al~--A~~d-----G~~--------v~~~~~a~~~ad 81 (163)
T d1li4a1 25 KVAVVAG-YGDVGKGCAQALRGFG-------ARVIITEIDPINALQ--AAME-----GYE--------VTTMDEACQEGN 81 (163)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTT-------CEEEEECSCHHHHHH--HHHT-----TCE--------ECCHHHHTTTCS
T ss_pred CEEEEec-cccccHHHHHHHHhCC-------CeeEeeecccchhHH--hhcC-----ceE--------eeehhhhhhhcc
Confidence 4677777 7999999999999998 899999999865322 2221 111 123678899999
Q ss_pred EEeecCCC
Q 012947 91 LLLNCVGP 98 (452)
Q Consensus 91 vVIn~aGp 98 (452)
+||.+.|-
T Consensus 82 ivvtaTGn 89 (163)
T d1li4a1 82 IFVTTTGC 89 (163)
T ss_dssp EEEECSSC
T ss_pred EEEecCCC
Confidence 99999874
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=92.35 E-value=0.046 Score=47.00 Aligned_cols=63 Identities=19% Similarity=0.140 Sum_probs=47.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
+..+|.|+|. |.||+.+++.+...| .+|...+|+.... ... -.+++++++++
T Consensus 41 ~gk~vgIiG~-G~IG~~va~~l~~~g-------~~v~~~d~~~~~~-------------~~~-------~~~~l~ell~~ 92 (181)
T d1qp8a1 41 QGEKVAVLGL-GEIGTRVGKILAALG-------AQVRGFSRTPKEG-------------PWR-------FTNSLEEALRE 92 (181)
T ss_dssp TTCEEEEESC-STHHHHHHHHHHHTT-------CEEEEECSSCCCS-------------SSC-------CBSCSHHHHTT
T ss_pred cCceEEEecc-ccccccceeeeeccc-------ccccccccccccc-------------cee-------eeechhhhhhc
Confidence 4568999997 889999999999988 8999998865321 001 11357899999
Q ss_pred ccEEeecCCCCC
Q 012947 89 TKLLLNCVGPYR 100 (452)
Q Consensus 89 ~dvVIn~aGp~~ 100 (452)
+|+|+.++ |..
T Consensus 93 sDiv~~~~-pl~ 103 (181)
T d1qp8a1 93 ARAAVCAL-PLN 103 (181)
T ss_dssp CSEEEECC-CCS
T ss_pred cchhhccc-ccc
Confidence 99999887 444
|
| >d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Galactose/lactose metabolism regulatory protein GAL80 species: Yeast (Kluyveromyces lactis) [TaxId: 28985]
Probab=92.17 E-value=0.76 Score=40.35 Aligned_cols=91 Identities=11% Similarity=0.058 Sum_probs=60.0
Q ss_pred CCCCeEEEEcCC---chHHHHHHHHHHHcCCCCCCCceEEE-EEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHH
Q 012947 8 PELFDVIILGAS---GFTGKYVVREALKLFNFPSSPIKSLA-LAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLH 83 (452)
Q Consensus 8 ~~~~~ilV~GAT---G~iG~~va~~L~~~g~~~~~~~~~v~-iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~ 83 (452)
+++++|-|+|.+ |++++.-...+.+..+ .++++ +++|+.++.+++.++++. ..... .+| ++
T Consensus 14 ~k~irvgiIG~G~~~~~~~~~h~~ai~~~~~-----~~~ivav~d~~~~~~~~~~~~~~~---~~~~~----~~~---~~ 78 (237)
T d2nvwa1 14 SRPIRVGFVGLTSGKSWVAKTHFLAIQQLSS-----QFQIVALYNPTLKSSLQTIEQLQL---KHATG----FDS---LE 78 (237)
T ss_dssp GCCEEEEEECCCSTTSHHHHTHHHHHHHTTT-----TEEEEEEECSCHHHHHHHHHHTTC---TTCEE----ESC---HH
T ss_pred CCCeEEEEEecCccccHHHHHHHHHHHhcCC-----CeEEEEEEcCCHHHHHHHHHhccc---cccee----ecc---hh
Confidence 577999999985 4566666666665432 16654 789999999988887642 11111 234 44
Q ss_pred HHHc--CccEEeecCCCCCCCCHHHHHHHHHhCC
Q 012947 84 RLCS--QTKLLLNCVGPYRLHGDPVAAACVHSGC 115 (452)
Q Consensus 84 ~~~~--~~dvVIn~aGp~~~~~~~vv~ac~~~g~ 115 (452)
++++ +.|+|+-|.-+.. + ..++..|+++|.
T Consensus 79 ~l~~~~~iD~V~i~tp~~~-h-~~~~~~al~aG~ 110 (237)
T d2nvwa1 79 SFAQYKDIDMIVVSVKVPE-H-YEVVKNILEHSS 110 (237)
T ss_dssp HHHHCTTCSEEEECSCHHH-H-HHHHHHHHHHSS
T ss_pred hcccccccceeeccCCCcc-h-hhHHHHHHHhcc
Confidence 4554 5788888874332 2 577888998885
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=92.13 E-value=0.22 Score=41.50 Aligned_cols=73 Identities=16% Similarity=0.231 Sum_probs=47.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCC----HHHHHHHH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTD----PPSLHRLC 86 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d----~~sl~~~~ 86 (452)
-+|+|+|+ |.+|...+..+...+. .+|++.+++++|++. ..+++. ..++ |..+ .+.+.+..
T Consensus 30 ~~VlI~G~-Gg~g~~~~~~~~~~g~------~~Vi~~~~~~~rl~~-a~~~GA-----d~~i--n~~~~~~~~~~~~~~~ 94 (175)
T d1cdoa2 30 STCAVFGL-GAVGLAAVMGCHSAGA------KRIIAVDLNPDKFEK-AKVFGA-----TDFV--NPNDHSEPISQVLSKM 94 (175)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC------SEEEEECSCGGGHHH-HHHTTC-----CEEE--CGGGCSSCHHHHHHHH
T ss_pred CEEEEEec-CCccchHHHHHHHHhh------chheeecchHHHHHH-HHHcCC-----cEEE--cCCCcchhHHHHHHhh
Confidence 46889987 5578888888888773 589999999999855 445642 1222 3222 12333333
Q ss_pred --cCccEEeecCCC
Q 012947 87 --SQTKLLLNCVGP 98 (452)
Q Consensus 87 --~~~dvVIn~aGp 98 (452)
.+.|++|.++|.
T Consensus 95 ~~~G~d~vid~~G~ 108 (175)
T d1cdoa2 95 TNGGVDFSLECVGN 108 (175)
T ss_dssp HTSCBSEEEECSCC
T ss_pred ccCCcceeeeecCC
Confidence 257888888863
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=92.08 E-value=0.09 Score=45.11 Aligned_cols=42 Identities=19% Similarity=0.228 Sum_probs=36.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQW 60 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~ 60 (452)
.+|.|+|| |.+|+.++..++..| ++|.+.+++++.+++..+.
T Consensus 5 ~~vaViGa-G~mG~~iA~~~a~~G-------~~V~l~D~~~~~l~~~~~~ 46 (186)
T d1wdka3 5 KQAAVLGA-GIMGGGIAYQSASKG-------TPILMKDINEHGIEQGLAE 46 (186)
T ss_dssp SSEEEECC-HHHHHHHHHHHHHTT-------CCEEEECSSHHHHHHHHHH
T ss_pred CEEEEECc-CHHHHHHHHHHHhCC-------CeEEEEECCHHHHhhhhhh
Confidence 35999998 999999999999998 8999999999887665443
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=91.43 E-value=0.13 Score=44.79 Aligned_cols=36 Identities=19% Similarity=0.221 Sum_probs=31.8
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC
Q 012947 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN 50 (452)
Q Consensus 7 ~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~ 50 (452)
|..+.+|+|+|| |..|..+|.+|+++| ++|.|+.|+
T Consensus 3 ~~~~~kVvVIGa-GiaGl~~A~~L~~~G-------~~V~vier~ 38 (268)
T d1c0pa1 3 MHSQKRVVVLGS-GVIGLSSALILARKG-------YSVHILARD 38 (268)
T ss_dssp CCCSCEEEEECC-SHHHHHHHHHHHHTT-------CEEEEEESS
T ss_pred CCCCCcEEEECc-cHHHHHHHHHHHHCC-------CCEEEEeCC
Confidence 444578999998 999999999999998 799999985
|
| >d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Ornithine cyclodeaminase-like domain: Ornithine cyclodeaminase species: Pseudomonas putida [TaxId: 303]
Probab=90.75 E-value=0.44 Score=44.71 Aligned_cols=73 Identities=11% Similarity=0.173 Sum_probs=57.1
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
..+.|+|+ |..++.-++.+...-+ .-+|.+.+|++++.+++.+++.. ..++.+..+ ++++++++++|
T Consensus 129 ~~l~iiG~-G~QA~~~~~a~~~v~~-----i~~V~v~~r~~~~~~~~~~~l~~--~~g~~v~~~-----~s~~eav~~AD 195 (340)
T d1x7da_ 129 RKMALIGN-GAQSEFQALAFHKHLG-----IEEIVAYDTDPLATAKLIANLKE--YSGLTIRRA-----SSVAEAVKGVD 195 (340)
T ss_dssp CEEEEECC-STTHHHHHHHHHHHSC-----CCEEEEECSSHHHHHHHHHHHTT--CTTCEEEEC-----SSHHHHHTTCS
T ss_pred ceEEEEcc-cHHHHHHHHHHhhhcc-----eeeeEEEecChHHHHHHHHhhhh--ccCCCceec-----CCHHHHHhcCC
Confidence 47889986 7889988888877653 26899999999999999998852 235566655 34788999999
Q ss_pred EEeecC
Q 012947 91 LLLNCV 96 (452)
Q Consensus 91 vVIn~a 96 (452)
+|+.|.
T Consensus 196 Ii~t~T 201 (340)
T d1x7da_ 196 IITTVT 201 (340)
T ss_dssp EEEECC
T ss_pred ceeecc
Confidence 998765
|
| >d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=90.32 E-value=0.13 Score=43.83 Aligned_cols=36 Identities=25% Similarity=0.289 Sum_probs=26.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEE-ecChhH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRNPTR 53 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~ia-gR~~~k 53 (452)
.+|-|-| .|.||+.++|.+..+.. .+++.+ ++++..
T Consensus 2 IKVaING-fGRIGR~v~Ral~~~~d------ievVaInd~~~~~ 38 (178)
T d1b7go1 2 VNVAVNG-YGTIGKRVADAIIKQPD------MKLVGVAKTSPNY 38 (178)
T ss_dssp EEEEEEC-CSHHHHHHHHHHHTCTT------EEEEEEECSSCSH
T ss_pred eEEEEEC-CCHHHHHHHHHHHhCCC------CEEEEEECCCCcH
Confidence 4688888 79999999999998753 666554 454443
|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Sarcosine oxidase species: Bacillus sp., strain b0618 [TaxId: 1409]
Probab=90.01 E-value=0.12 Score=46.26 Aligned_cols=33 Identities=30% Similarity=0.248 Sum_probs=30.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN 50 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~ 50 (452)
.|||+|+|| |.+|..+|.+|+++| ++|+++.|.
T Consensus 3 ~yDvvIIGa-Gi~Gls~A~~La~~G-------~~V~viE~~ 35 (281)
T d2gf3a1 3 HFDVIVVGA-GSMGMAAGYQLAKQG-------VKTLLVDAF 35 (281)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHTT-------CCEEEECSS
T ss_pred cCCEEEECc-CHHHHHHHHHHHHCC-------CcEEEEeCC
Confidence 699999998 999999999999998 899999874
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=89.89 E-value=0.22 Score=38.82 Aligned_cols=36 Identities=8% Similarity=0.157 Sum_probs=31.5
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT 52 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~ 52 (452)
.+.+++|+|| |++|-.+|..|.+.| .+|.++.|...
T Consensus 21 ~p~~v~IiGg-G~ig~E~A~~l~~~G-------~~Vtlve~~~~ 56 (117)
T d1ebda2 21 VPKSLVVIGG-GYIGIELGTAYANFG-------TKVTILEGAGE 56 (117)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTT-------CEEEEEESSSS
T ss_pred cCCeEEEECC-Cccceeeeeeecccc-------cEEEEEEecce
Confidence 3568999998 999999999999998 79999988653
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=89.51 E-value=0.35 Score=40.45 Aligned_cols=66 Identities=17% Similarity=0.233 Sum_probs=49.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
.+++|.| .|.+|+-+|++|...| .+|.+.-+++-+. +.+.+. ..++ ..++++++.+|
T Consensus 24 k~vvV~G-YG~vGrG~A~~~rg~G-------a~V~V~E~DPi~a--lqA~md-----Gf~v--------~~~~~a~~~aD 80 (163)
T d1v8ba1 24 KIVVICG-YGDVGKGCASSMKGLG-------ARVYITEIDPICA--IQAVME-----GFNV--------VTLDEIVDKGD 80 (163)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHHT-------CEEEEECSCHHHH--HHHHTT-----TCEE--------CCHHHHTTTCS
T ss_pred CEEEEec-ccccchhHHHHHHhCC-------CEEEEEecCchhh--HHHHhc-----CCcc--------CchhHccccCc
Confidence 4677877 6999999999999998 8999999998653 222221 1121 23688999999
Q ss_pred EEeecCCCC
Q 012947 91 LLLNCVGPY 99 (452)
Q Consensus 91 vVIn~aGp~ 99 (452)
++|.+.|-.
T Consensus 81 i~vTaTGn~ 89 (163)
T d1v8ba1 81 FFITCTGNV 89 (163)
T ss_dssp EEEECCSSS
T ss_pred EEEEcCCCC
Confidence 999998843
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=89.35 E-value=2.6 Score=31.45 Aligned_cols=91 Identities=10% Similarity=0.061 Sum_probs=57.4
Q ss_pred CCCCCCeEEEEcCCchHH-HHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH
Q 012947 6 QIPELFDVIILGASGFTG-KYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHR 84 (452)
Q Consensus 6 ~~~~~~~ilV~GATG~iG-~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~ 84 (452)
.+.+..+|-++|-. ++| ..+|+.|.+.| ++|...++.....-+.+.+. .+.+...+ +++.
T Consensus 4 ~~~~~~~ihfiGig-G~GMs~LA~~L~~~G-------~~VsGSD~~~~~~~~~L~~~------Gi~v~~g~--~~~~--- 64 (96)
T d1p3da1 4 EMRRVQQIHFIGIG-GAGMSGIAEILLNEG-------YQISGSDIADGVVTQRLAQA------GAKIYIGH--AEEH--- 64 (96)
T ss_dssp CCTTCCEEEEETTT-STTHHHHHHHHHHHT-------CEEEEEESCCSHHHHHHHHT------TCEEEESC--CGGG---
T ss_pred cchhCCEEEEEEEC-HHHHHHHHHHHHhCC-------CEEEEEeCCCChhhhHHHHC------CCeEEECC--cccc---
Confidence 34456678888764 345 66799999999 89999998755443333333 34444332 2332
Q ss_pred HHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEE
Q 012947 85 LCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYL 118 (452)
Q Consensus 85 ~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yv 118 (452)
++++|+||...+.- ..-+.+.+|.+.|...+
T Consensus 65 -i~~~d~vV~S~AI~--~~npel~~A~~~gipii 95 (96)
T d1p3da1 65 -IEGASVVVVSSAIK--DDNPELVTSKQKRIPVI 95 (96)
T ss_dssp -GTTCSEEEECTTSC--TTCHHHHHHHHTTCCEE
T ss_pred -CCCCCEEEECCCcC--CCCHHHHHHHHcCCCEE
Confidence 35788888776532 33466777888877543
|
| >d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=89.21 E-value=0.13 Score=44.34 Aligned_cols=34 Identities=24% Similarity=0.282 Sum_probs=31.1
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN 50 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~ 50 (452)
++||++|+|| |..|...+.++++.| .+|+++.++
T Consensus 1 k~yDvvVIG~-G~aG~~aA~~a~~~G-------~kV~iiE~~ 34 (217)
T d1gesa1 1 KHYDYIAIGG-GSGGIASINRAAMYG-------QKCALIEAK 34 (217)
T ss_dssp CEEEEEEECC-SHHHHHHHHHHHTTT-------CCEEEEESS
T ss_pred CcCCEEEECC-CHHHHHHHHHHHHCC-------CEEEEEecc
Confidence 4799999998 999999999999998 799999875
|
| >d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: Amyloid beta precursor protein-binding protein 1, APPBP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.95 E-value=0.15 Score=51.11 Aligned_cols=101 Identities=14% Similarity=0.113 Sum_probs=62.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh-------------------hHHHHHHHHhCCCCCCCcc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-------------------TRVKQALQWASPSHSLSIP 70 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~-------------------~kl~~l~~~l~~~~~~~v~ 70 (452)
..+|+|+|+ |.+|..+++.|+..|. -++.+++.+. .|.+.+.+.+.. ..+.+.
T Consensus 25 ~s~VlvvG~-gglG~Ei~knLvl~GV------g~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~-lNp~v~ 96 (529)
T d1yova1 25 SAHVCLINA-TATGTEILKNLVLPGI------GSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQE-LNSDVS 96 (529)
T ss_dssp HCEEEECCC-SHHHHHHHHHHHTTTC------SEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHT-TCTTSB
T ss_pred CCCEEEECC-CHHHHHHHHHHHHhcC------CEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHH-hCCCCc
Confidence 458999998 6799999999999884 4777775431 233333333321 123333
Q ss_pred EEEEeCCCHHHH----HHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEe
Q 012947 71 ILTADTTDPPSL----HRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDI 120 (452)
Q Consensus 71 ~v~~Dl~d~~sl----~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDl 120 (452)
+...+. +.+++ ...+++.|+||.|..+.... ..+.+.|.+.++.+|+.
T Consensus 97 i~~~~~-~~~~~~~~~~~~~~~~dvVv~~~~~~~~~-~~l~~~c~~~~ip~i~~ 148 (529)
T d1yova1 97 GSFVEE-SPENLLDNDPSFFCRFTVVVATQLPESTS-LRLADVLWNSQIPLLIC 148 (529)
T ss_dssp CCEESS-CHHHHHHSCGGGGGGCSEEEEESCCHHHH-HHHHHHHHHHTCCEEEE
T ss_pred EEEEcC-CchhhhhhHHHHhcCCCEEEECCCCHHHH-HHHHHHHHHcCCCEEEE
Confidence 333322 23332 24567889999987544322 56788999888876654
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=88.61 E-value=0.25 Score=42.19 Aligned_cols=64 Identities=16% Similarity=0.084 Sum_probs=46.5
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
+..++.|+|. |.||+.+++.+...+ .+|...+|...+...... .+. ..++++++++
T Consensus 43 ~~k~vgiiG~-G~IG~~va~~~~~fg-------~~v~~~d~~~~~~~~~~~--------~~~--------~~~l~ell~~ 98 (184)
T d1ygya1 43 FGKTVGVVGL-GRIGQLVAQRIAAFG-------AYVVAYDPYVSPARAAQL--------GIE--------LLSLDDLLAR 98 (184)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHTTT-------CEEEEECTTSCHHHHHHH--------TCE--------ECCHHHHHHH
T ss_pred cceeeeeccc-cchhHHHHHHhhhcc-------ceEEeecCCCChhHHhhc--------Cce--------eccHHHHHhh
Confidence 3457888875 999999999998877 799988887655433221 111 1347889999
Q ss_pred ccEEeecC
Q 012947 89 TKLLLNCV 96 (452)
Q Consensus 89 ~dvVIn~a 96 (452)
+|+|+.++
T Consensus 99 sDiv~~~~ 106 (184)
T d1ygya1 99 ADFISVHL 106 (184)
T ss_dssp CSEEEECC
T ss_pred CCEEEEcC
Confidence 99999887
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=88.49 E-value=1.9 Score=31.95 Aligned_cols=85 Identities=13% Similarity=0.148 Sum_probs=56.2
Q ss_pred CeEEEEcCCchHH-HHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 11 FDVIILGASGFTG-KYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG-~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
++|-++|-.| +| +.+|+.|.+.| +.|...++.....-+.++++ .+.+... .+++. ++++
T Consensus 2 ~~ihfiGIgG-~GMs~LA~~L~~~G-------~~VsGSD~~~~~~t~~L~~~------Gi~i~~g--h~~~~----i~~~ 61 (89)
T d1j6ua1 2 MKIHFVGIGG-IGMSAVALHEFSNG-------NDVYGSNIEETERTAYLRKL------GIPIFVP--HSADN----WYDP 61 (89)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTT-------CEEEEECSSCCHHHHHHHHT------TCCEESS--CCTTS----CCCC
T ss_pred cEEEEEeECH-HHHHHHHHHHHhCC-------CeEEEEeCCCChhHHHHHHC------CCeEEee--ecccc----cCCC
Confidence 5777888744 45 46789999998 89999999875554445554 3454432 22222 3578
Q ss_pred cEEeecCCCCCCCCHHHHHHHHHhCCcE
Q 012947 90 KLLLNCVGPYRLHGDPVAAACVHSGCDY 117 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~~~g~~y 117 (452)
|+||...+.- ..-+.+++|.+.|...
T Consensus 62 d~vV~SsAI~--~~npel~~A~~~gIpv 87 (89)
T d1j6ua1 62 DLVIKTPAVR--DDNPEIVRARMERVPI 87 (89)
T ss_dssp SEEEECTTCC--TTCHHHHHHHHTTCCE
T ss_pred CEEEEecCcC--CCCHHHHHHHHcCCCc
Confidence 9988776543 3357788888888754
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=88.24 E-value=0.2 Score=44.51 Aligned_cols=73 Identities=16% Similarity=0.159 Sum_probs=52.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
...+|+|-|- |-+|+.++++|.+.| .++++.+.+..+++.+....+. .. .+++++ +-..
T Consensus 38 ~g~~v~IqG~-GnVG~~~a~~L~~~G-------akvv~~d~~~~~~~~~~~~~g~------~~-----~~~~~~--~~~~ 96 (230)
T d1leha1 38 EGLAVSVQGL-GNVAKALCKKLNTEG-------AKLVVTDVNKAAVSAAVAEEGA------DA-----VAPNAI--YGVT 96 (230)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTT-------CEEEEECSCHHHHHHHHHHHCC------EE-----CCGGGT--TTCC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCC-------CEEEeecccHHHHHHHHHhcCC------cc-----cCCccc--cccc
Confidence 4567888875 999999999999998 8999999999999888876542 11 122222 1236
Q ss_pred ccEEeecCCCCCCC
Q 012947 89 TKLLLNCVGPYRLH 102 (452)
Q Consensus 89 ~dvVIn~aGp~~~~ 102 (452)
||+++=||-.....
T Consensus 97 cDIl~PcA~~~~I~ 110 (230)
T d1leha1 97 CDIFAPCALGAVLN 110 (230)
T ss_dssp CSEEEECSCSCCBS
T ss_pred ccEecccccccccC
Confidence 88888888655444
|
| >d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=88.06 E-value=0.12 Score=44.64 Aligned_cols=36 Identities=28% Similarity=0.316 Sum_probs=32.3
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC
Q 012947 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN 50 (452)
Q Consensus 7 ~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~ 50 (452)
|.++||++|+|| |-.|...+.++++.| .+|+++.+.
T Consensus 2 m~~~yDviVIG~-GpAGl~aA~~aa~~G-------~kV~lie~~ 37 (233)
T d1v59a1 2 INKSHDVVIIGG-GPAGYVAAIKAAQLG-------FNTACVEKR 37 (233)
T ss_dssp EEEEEEEEEECC-SHHHHHHHHHHHHTT-------CCEEEEESS
T ss_pred CCcccCEEEECC-CHHHHHHHHHHHHCC-------CcEEEEEec
Confidence 567899999998 899999999999998 799999864
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=87.94 E-value=0.32 Score=42.03 Aligned_cols=63 Identities=14% Similarity=0.021 Sum_probs=47.1
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
+..+|.|+|- |.||+.+++.|...| .+|...++....... .. .. ..+++++++++
T Consensus 42 ~gk~vgIiG~-G~IG~~va~~l~~fg-------~~V~~~d~~~~~~~~--~~-------~~--------~~~~l~~~l~~ 96 (197)
T d1j4aa1 42 RDQVVGVVGT-GHIGQVFMQIMEGFG-------AKVITYDIFRNPELE--KK-------GY--------YVDSLDDLYKQ 96 (197)
T ss_dssp GGSEEEEECC-SHHHHHHHHHHHHTT-------CEEEEECSSCCHHHH--HT-------TC--------BCSCHHHHHHH
T ss_pred cCCeEEEecc-cccchhHHHhHhhhc-------ccccccCcccccccc--cc-------ee--------eeccccccccc
Confidence 4578999996 999999999998888 899988876543221 10 11 12458889999
Q ss_pred ccEEeecC
Q 012947 89 TKLLLNCV 96 (452)
Q Consensus 89 ~dvVIn~a 96 (452)
+|+|+.++
T Consensus 97 sDii~~~~ 104 (197)
T d1j4aa1 97 ADVISLHV 104 (197)
T ss_dssp CSEEEECS
T ss_pred cccccccC
Confidence 99999887
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=87.90 E-value=0.7 Score=39.87 Aligned_cols=109 Identities=15% Similarity=0.157 Sum_probs=66.7
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH-
Q 012947 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC- 86 (452)
Q Consensus 8 ~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~- 86 (452)
-+..+|+|-| -|-+|+.++++|.+.| .+|++.+.+.+++..... ++ ...+ +.+ +++
T Consensus 25 L~gk~v~IqG-~G~VG~~~A~~L~~~G-------akvvv~d~d~~~~~~~~~-~g------~~~~-----~~~---~~~~ 81 (201)
T d1c1da1 25 LDGLTVLVQG-LGAVGGSLASLAAEAG-------AQLLVADTDTERVAHAVA-LG------HTAV-----ALE---DVLS 81 (201)
T ss_dssp STTCEEEEEC-CSHHHHHHHHHHHHTT-------CEEEEECSCHHHHHHHHH-TT------CEEC-----CGG---GGGG
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHCC-------CEEEEecchHHHHHHHHh-hc------cccc-----Ccc---cccc
Confidence 3557899988 5899999999999999 899999999988876543 21 1111 112 233
Q ss_pred cCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEE
Q 012947 87 SQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLV 146 (452)
Q Consensus 87 ~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv 146 (452)
.++|+++=||...... ...+ ..-++.+|-=....++..+- .++..+++|+.++
T Consensus 82 ~~~DI~iPcA~~~~I~-~~~a---~~i~ak~i~e~AN~p~~~~~---~~~~L~~rgI~~i 134 (201)
T d1c1da1 82 TPCDVFAPCAMGGVIT-TEVA---RTLDCSVVAGAANNVIADEA---ASDILHARGILYA 134 (201)
T ss_dssp CCCSEEEECSCSCCBC-HHHH---HHCCCSEECCSCTTCBCSHH---HHHHHHHTTCEEC
T ss_pred ccceeeeccccccccc-HHHH---hhhhhheeeccCCCCcchhh---HHHHhcccceEEE
Confidence 3789999888654433 2222 23355666322223333221 1334456788765
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=87.79 E-value=0.34 Score=38.00 Aligned_cols=34 Identities=15% Similarity=0.155 Sum_probs=30.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP 51 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~ 51 (452)
+.+++|+|| |++|-.+|..|.+.| .+|.+..|..
T Consensus 22 p~~v~IiGg-G~iG~E~A~~l~~~g-------~~Vtlv~~~~ 55 (117)
T d1onfa2 22 SKKIGIVGS-GYIAVELINVIKRLG-------IDSYIFARGN 55 (117)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHTTT-------CEEEEECSSS
T ss_pred CCEEEEECC-chHHHHHHHHHHhcc-------ccceeeehhc
Confidence 568999998 999999999999988 7999999853
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=87.74 E-value=0.31 Score=38.51 Aligned_cols=35 Identities=17% Similarity=0.169 Sum_probs=31.1
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP 51 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~ 51 (452)
-+.+++|+|| |++|-.+|..|.+.| .+|.++.|+.
T Consensus 22 ~p~~~vIiG~-G~ig~E~A~~l~~lG-------~~Vtii~~~~ 56 (122)
T d1v59a2 22 IPKRLTIIGG-GIIGLEMGSVYSRLG-------SKVTVVEFQP 56 (122)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTT-------CEEEEECSSS
T ss_pred CCCeEEEECC-CchHHHHHHHHHhhC-------cceeEEEecc
Confidence 3568999998 999999999999998 7999998865
|
| >d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=87.52 E-value=0.25 Score=42.18 Aligned_cols=35 Identities=31% Similarity=0.393 Sum_probs=31.2
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC
Q 012947 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN 50 (452)
Q Consensus 8 ~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~ 50 (452)
+++||++|+|| |-.|...+.++++.+ .+|+++.+.
T Consensus 1 ~~kYDviIIGg-GpAGl~aA~~aar~G-------~~V~viE~~ 35 (229)
T d3lada1 1 SQKFDVIVIGA-GPGGYVAAIKSAQLG-------LKTALIEKY 35 (229)
T ss_dssp CCCCSEEEECC-SHHHHHHHHHHHHHT-------CCEEEEECC
T ss_pred CCcCCEEEECc-CHHHHHHHHHHHHCC-------CeEEEEecc
Confidence 36799999998 899999999999998 799998764
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=87.27 E-value=0.34 Score=37.75 Aligned_cols=34 Identities=21% Similarity=0.059 Sum_probs=30.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP 51 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~ 51 (452)
+.+++|+|| |++|-.++..|.+.| .+|.+..|..
T Consensus 21 p~~vvIiGg-G~ig~E~A~~l~~~G-------~~Vtlve~~~ 54 (116)
T d1gesa2 21 PERVAVVGA-GYIGVELGGVINGLG-------AKTHLFEMFD 54 (116)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTT-------CEEEEECSSS
T ss_pred CCEEEEECC-ChhhHHHHHHhhccc-------cEEEEEeecc
Confidence 468999998 999999999999998 7999999864
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=87.24 E-value=0.16 Score=43.06 Aligned_cols=78 Identities=9% Similarity=-0.063 Sum_probs=52.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeC--CCHHHHHHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADT--TDPPSLHRLC 86 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl--~d~~sl~~~~ 86 (452)
+..+++|+|.+.-+|+-++..|++++ ..|.++.++..........+ .-......|+ -.++.+++.+
T Consensus 28 ~GK~vvVIGrS~iVG~Pla~lL~~~g-------aTVt~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~lk~~~ 95 (171)
T d1edza1 28 YGKKCIVINRSEIVGRPLAALLANDG-------ATVYSVDVNNIQKFTRGESL-----KLNKHHVEDLGEYSEDLLKKCS 95 (171)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTS-------CEEEEECSSEEEEEESCCCS-----SCCCCEEEEEEECCHHHHHHHH
T ss_pred CCCEEEEECCccccHHHHHHHHHHCC-------CEEEEeccccccccccccce-----eeeeeccccccccchhHHhhcc
Confidence 45789999999999999999999987 78888776432210000000 0001112222 3467799999
Q ss_pred cCccEEeecCCC
Q 012947 87 SQTKLLLNCVGP 98 (452)
Q Consensus 87 ~~~dvVIn~aGp 98 (452)
.++|+||+.+|-
T Consensus 96 ~~aDIvIsavG~ 107 (171)
T d1edza1 96 LDSDVVITGVPS 107 (171)
T ss_dssp HHCSEEEECCCC
T ss_pred ccCCEEEEccCC
Confidence 999999999985
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=87.19 E-value=0.41 Score=37.69 Aligned_cols=35 Identities=20% Similarity=0.268 Sum_probs=30.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT 52 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~ 52 (452)
..+++|.|| |++|-.+|..|.+.+ .+|.++.|+..
T Consensus 30 ~~~vvIIGg-G~iG~E~A~~l~~~g-------~~Vtli~~~~~ 64 (121)
T d1d7ya2 30 QSRLLIVGG-GVIGLELAATARTAG-------VHVSLVETQPR 64 (121)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTT-------CEEEEEESSSS
T ss_pred CCeEEEECc-chhHHHHHHHhhccc-------ceEEEEeeccc
Confidence 357999998 999999999999998 79999988653
|
| >d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PF0725 species: Pyrococcus furiosus [TaxId: 2261]
Probab=87.16 E-value=0.24 Score=39.00 Aligned_cols=102 Identities=17% Similarity=0.169 Sum_probs=64.8
Q ss_pred eEEEEcCC---chHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 12 DVIILGAS---GFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 12 ~ilV~GAT---G~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
.|.|+||| +-.|..+.+.|.+.| ++|.....+.+... ....+ .++.++=..
T Consensus 3 sIAVvGaS~~~~k~g~~v~~~L~~~g-------~~V~pVnP~~~~i~------------G~~~y-------~sl~~lp~~ 56 (116)
T d1y81a1 3 KIALVGASKNPAKYGNIILKDLLSKG-------FEVLPVNPNYDEIE------------GLKCY-------RSVRELPKD 56 (116)
T ss_dssp EEEEETCCSCTTSHHHHHHHHHHHTT-------CEEEEECTTCSEET------------TEECB-------SSGGGSCTT
T ss_pred EEEEEcccCCCCCcHHHHHHHHHHCC-------CEEEEEcccccccc------------Ccccc-------ccchhcccc
Confidence 58899998 668999999999998 78776654332210 11111 223333346
Q ss_pred ccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEE
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLV 146 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv 146 (452)
.|+++-+..+- ....+++.|.+.|+..+-+.... +. +...+.+++.|+.++
T Consensus 57 ~D~vvi~vp~~--~~~~~l~~~~~~g~k~v~~~~g~-~~----~~~~~~a~~~gi~vi 107 (116)
T d1y81a1 57 VDVIVFVVPPK--VGLQVAKEAVEAGFKKLWFQPGA-ES----EEIRRFLEKAGVEYS 107 (116)
T ss_dssp CCEEEECSCHH--HHHHHHHHHHHTTCCEEEECTTS-CC----HHHHHHHHHHTCEEE
T ss_pred ceEEEEEeCHH--HHHHHHHHHHhcCCceEEeccch-hh----HHHHHHHHHcCCEEE
Confidence 78888777542 22678899999999866553221 11 223567888898877
|
| >d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=86.96 E-value=0.29 Score=41.89 Aligned_cols=34 Identities=24% Similarity=0.232 Sum_probs=30.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN 50 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~ 50 (452)
.+||++|+|| |..|...+.++++.| .+|+++.++
T Consensus 2 ~~yDvvVIGg-GpaGl~aA~~aa~~G-------~kV~vie~~ 35 (221)
T d1dxla1 2 DENDVVIIGG-GPGGYVAAIKAAQLG-------FKTTCIEKR 35 (221)
T ss_dssp CCCCEEEECC-SHHHHHHHHHHHHHT-------CCEEEEECS
T ss_pred CcCCEEEECC-CHHHHHHHHHHHHCC-------CcEEEEEec
Confidence 4699999998 899999999999998 789998764
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=86.92 E-value=0.35 Score=41.50 Aligned_cols=65 Identities=15% Similarity=0.105 Sum_probs=46.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..++.|+|. |.||+.+++.+...+ .++...++............ ....++++++++++
T Consensus 47 g~tvgIiG~-G~IG~~va~~l~~fg-------~~v~~~d~~~~~~~~~~~~~--------------~~~~~~l~~ll~~s 104 (191)
T d1gdha1 47 NKTLGIYGF-GSIGQALAKRAQGFD-------MDIDYFDTHRASSSDEASYQ--------------ATFHDSLDSLLSVS 104 (191)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHTTT-------CEEEEECSSCCCHHHHHHHT--------------CEECSSHHHHHHHC
T ss_pred ccceEEeec-ccchHHHHHHHHhhc-------cccccccccccccchhhccc--------------ccccCCHHHHHhhC
Confidence 467889886 899999999998887 78988887654332222211 01124588999999
Q ss_pred cEEeecC
Q 012947 90 KLLLNCV 96 (452)
Q Consensus 90 dvVIn~a 96 (452)
|+|+.++
T Consensus 105 D~v~l~~ 111 (191)
T d1gdha1 105 QFFSLNA 111 (191)
T ss_dssp SEEEECC
T ss_pred CeEEecC
Confidence 9998877
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=86.88 E-value=0.29 Score=42.18 Aligned_cols=65 Identities=12% Similarity=-0.004 Sum_probs=47.1
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
+..++.|+|. |-||+.+++.|...| .+|...+|....... ...+ +...+++++++++
T Consensus 48 ~gktvgIiG~-G~IG~~va~~l~~fg-------~~v~~~d~~~~~~~~--~~~~-------------~~~~~~l~~ll~~ 104 (193)
T d1mx3a1 48 RGETLGIIGL-GRVGQAVALRAKAFG-------FNVLFYDPYLSDGVE--RALG-------------LQRVSTLQDLLFH 104 (193)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHTTT-------CEEEEECTTSCTTHH--HHHT-------------CEECSSHHHHHHH
T ss_pred eCceEEEecc-ccccccceeeeeccc-------cceeeccCcccccch--hhhc-------------cccccchhhcccc
Confidence 3467999986 999999999998887 899998886543221 1111 1112468889999
Q ss_pred ccEEeecC
Q 012947 89 TKLLLNCV 96 (452)
Q Consensus 89 ~dvVIn~a 96 (452)
+|+|+.++
T Consensus 105 sD~i~~~~ 112 (193)
T d1mx3a1 105 SDCVTLHC 112 (193)
T ss_dssp CSEEEECC
T ss_pred CCEEEEee
Confidence 99998877
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=86.73 E-value=0.53 Score=40.04 Aligned_cols=66 Identities=15% Similarity=0.030 Sum_probs=47.3
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
+..++.|+|. |.||+.++++|...+ .+|...+|......... ... +....++++++++
T Consensus 43 ~~~~vgiiG~-G~IG~~va~~l~~fg-------~~v~~~d~~~~~~~~~~-~~~-------------~~~~~~l~~~l~~ 100 (188)
T d2naca1 43 EAMHVGTVAA-GRIGLAVLRRLAPFD-------VHLHYTDRHRLPESVEK-ELN-------------LTWHATREDMYPV 100 (188)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHGGGT-------CEEEEECSSCCCHHHHH-HHT-------------CEECSSHHHHGGG
T ss_pred cccceeeccc-cccchhhhhhhhccC-------ceEEEEeeccccccccc-ccc-------------ccccCCHHHHHHh
Confidence 4567888885 999999999998887 79999998654332221 111 1122557888999
Q ss_pred ccEEeecC
Q 012947 89 TKLLLNCV 96 (452)
Q Consensus 89 ~dvVIn~a 96 (452)
+|+|+.++
T Consensus 101 sD~v~~~~ 108 (188)
T d2naca1 101 CDVVTLNC 108 (188)
T ss_dssp CSEEEECS
T ss_pred ccchhhcc
Confidence 99998877
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=86.58 E-value=0.51 Score=37.13 Aligned_cols=34 Identities=18% Similarity=0.281 Sum_probs=29.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP 51 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~ 51 (452)
..+|+|.|| |++|-.+|..|.+.| .+|.+..|..
T Consensus 30 ~k~vvViGg-G~iG~E~A~~l~~~g-------~~Vtlie~~~ 63 (123)
T d1nhpa2 30 VNNVVVIGS-GYIGIEAAEAFAKAG-------KKVTVIDILD 63 (123)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTT-------CEEEEEESSS
T ss_pred CCEEEEECC-hHHHHHHHHHhhccc-------eEEEEEEecC
Confidence 458999987 999999999999998 7999998754
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=86.47 E-value=0.39 Score=42.87 Aligned_cols=38 Identities=16% Similarity=0.155 Sum_probs=32.8
Q ss_pred CCCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh
Q 012947 6 QIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP 51 (452)
Q Consensus 6 ~~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~ 51 (452)
...++.+|+|+|| |..|-.+|.+|++.| ++|.|..++.
T Consensus 26 ~~~~pkkV~IIGa-G~aGLsaA~~L~~~G-------~~V~vlE~~~ 63 (370)
T d2iida1 26 ATSNPKHVVIVGA-GMAGLSAAYVLAGAG-------HQVTVLEASE 63 (370)
T ss_dssp CCSSCCEEEEECC-BHHHHHHHHHHHHHT-------CEEEEECSSS
T ss_pred CCCCCCeEEEECC-CHHHHHHHHHHHHCC-------CCEEEEeCCC
Confidence 3446789999998 999999999999998 8999998754
|
| >d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Transcriptional repressor Rex, C-terminal domain domain: Transcriptional repressor Rex, C-terminal domain species: Thermus aquaticus [TaxId: 271]
Probab=86.47 E-value=0.14 Score=41.06 Aligned_cols=86 Identities=16% Similarity=0.062 Sum_probs=51.5
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEE-EecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLAL-AGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~i-agR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
|+++++|+|| |.+|+.+++++..+. .++++. .+-++++.-.. + .++++. +. +.+.+..+
T Consensus 2 ~~~~v~I~Ga-G~~G~~l~~~l~~~~------~~~iv~fiDdd~~k~G~~---I-----~Gi~V~--~~---~~l~~~~~ 61 (126)
T d2dt5a2 2 RKWGLCIVGM-GRLGSALADYPGFGE------SFELRGFFDVDPEKVGRP---V-----RGGVIE--HV---DLLPQRVP 61 (126)
T ss_dssp SCEEEEEECC-SHHHHHHHHCSCCCS------SEEEEEEEESCTTTTTCE---E-----TTEEEE--EG---GGHHHHST
T ss_pred CCceEEEEcC-CHHHHHHHHhHhhcC------CcEEEEEEeCchHhcCCE---E-----CCEEEe--cH---HHHHHHHh
Confidence 6789999998 899999999875433 166554 45555543211 1 234443 33 34555554
Q ss_pred -CccEEeecCCCCCCCCHHHHHHHHHhCCc
Q 012947 88 -QTKLLLNCVGPYRLHGDPVAAACVHSGCD 116 (452)
Q Consensus 88 -~~dvVIn~aGp~~~~~~~vv~ac~~~g~~ 116 (452)
+.++.+-++.. .....+++.|.+.|+.
T Consensus 62 ~~i~iai~~i~~--~~~~~I~d~l~~~gIk 89 (126)
T d2dt5a2 62 GRIEIALLTVPR--EAAQKAADLLVAAGIK 89 (126)
T ss_dssp TTCCEEEECSCH--HHHHHHHHHHHHHTCC
T ss_pred hcccEEEEeCCH--HHHHHHHHHHHHcCCC
Confidence 45666655521 1225677888887775
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.18 E-value=0.42 Score=37.77 Aligned_cols=34 Identities=21% Similarity=0.133 Sum_probs=30.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP 51 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~ 51 (452)
+.+++|+|| |++|-.++..|.+.| .+|.++.|+.
T Consensus 22 pk~vvIvGg-G~iG~E~A~~l~~~G-------~~Vtlv~~~~ 55 (125)
T d3grsa2 22 PGRSVIVGA-GYIAVEMAGILSALG-------SKTSLMIRHD 55 (125)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTT-------CEEEEECSSS
T ss_pred CCEEEEEcC-CccHHHHHHHHhcCC-------cEEEEEeecc
Confidence 468999998 999999999999998 7999999964
|
| >d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Flavoprotein BC4706 species: Bacillus cereus [TaxId: 1396]
Probab=86.17 E-value=0.26 Score=43.07 Aligned_cols=35 Identities=23% Similarity=0.331 Sum_probs=31.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT 52 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~ 52 (452)
+|||+|+|| |-.|..+|..|++.| ++|.++.++..
T Consensus 2 ~yDViIIGa-G~aGl~aA~~la~~G-------~~V~liEk~~~ 36 (251)
T d2i0za1 2 HYDVIVIGG-GPSGLMAAIGAAEEG-------ANVLLLDKGNK 36 (251)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTT-------CCEEEECSSSS
T ss_pred cCCEEEECc-CHHHHHHHHHHHHCC-------CcEEEEeCCCC
Confidence 489999998 899999999999998 89999998754
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=86.06 E-value=0.41 Score=37.76 Aligned_cols=34 Identities=9% Similarity=0.016 Sum_probs=29.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN 50 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~ 50 (452)
.+.+++|+|| |+||-.+|..|.+.| .+|.++.|+
T Consensus 19 ~P~~vvIIGg-G~iG~E~A~~l~~lG-------~~Vtii~~~ 52 (122)
T d1h6va2 19 CPGKTLVVGA-SYVALECAGFLAGIG-------LDVTVMVRS 52 (122)
T ss_dssp CCCSEEEECC-SHHHHHHHHHHHHTT-------CCEEEEESS
T ss_pred CCCeEEEECC-CccHHHHHHHHhhcC-------CeEEEEEec
Confidence 3457999998 999999999999998 688888886
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=85.99 E-value=0.55 Score=36.71 Aligned_cols=35 Identities=14% Similarity=0.029 Sum_probs=31.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP 51 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~ 51 (452)
.+.+++|+|| |++|-.+|..|++.| .+|.+..|+.
T Consensus 21 ~p~~i~IiG~-G~ig~E~A~~l~~~G-------~~Vtiv~~~~ 55 (119)
T d3lada2 21 VPGKLGVIGA-GVIGLELGSVWARLG-------AEVTVLEAMD 55 (119)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTT-------CEEEEEESSS
T ss_pred CCCeEEEECC-ChHHHHHHHHHHHcC-------CceEEEEeec
Confidence 4578999998 999999999999998 7899988764
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=85.62 E-value=0.36 Score=38.08 Aligned_cols=36 Identities=11% Similarity=0.132 Sum_probs=31.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT 52 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~ 52 (452)
-+.+++|+|| |++|-.+|..|.+.| .+|.++.|+..
T Consensus 24 ~p~~~viiG~-G~iglE~A~~~~~~G-------~~Vtvi~~~~~ 59 (123)
T d1dxla2 24 IPKKLVVIGA-GYIGLEMGSVWGRIG-------SEVTVVEFASE 59 (123)
T ss_dssp CCSEEEESCC-SHHHHHHHHHHHHHT-------CEEEEECSSSS
T ss_pred cCCeEEEEcc-chHHHHHHHHHHhcC-------CeEEEEEEccc
Confidence 4568999998 999999999999999 79999998653
|
| >d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=85.49 E-value=0.31 Score=44.73 Aligned_cols=38 Identities=32% Similarity=0.520 Sum_probs=32.8
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh
Q 012947 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT 52 (452)
Q Consensus 7 ~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~ 52 (452)
+.+++||+|+|| |..|-.++.+|.+.| .++.|..++.+
T Consensus 4 p~~~~dV~IIGA-G~sGl~~a~~L~~~G-------~~v~i~Ek~~~ 41 (298)
T d1w4xa1 4 PPEEVDVLVVGA-GFSGLYALYRLRELG-------RSVHVIETAGD 41 (298)
T ss_dssp CCSEEEEEEECC-SHHHHHHHHHHHHTT-------CCEEEECSSSS
T ss_pred CCCCCCEEEECc-cHHHHHHHHHHHhCC-------CCEEEEEcCCC
Confidence 346789999999 999999999999988 78999988653
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=85.24 E-value=0.55 Score=36.33 Aligned_cols=35 Identities=14% Similarity=0.185 Sum_probs=30.5
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP 51 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~ 51 (452)
.+.+++|.|| |++|-.+|..|.+.| .+|.+..|.+
T Consensus 20 ~p~~vvIiGg-G~~G~E~A~~l~~~g-------~~Vtlve~~~ 54 (115)
T d1lvla2 20 LPQHLVVVGG-GYIGLELGIAYRKLG-------AQVSVVEARE 54 (115)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHHT-------CEEEEECSSS
T ss_pred CCCeEEEECC-CHHHHHHHHHHhhcc-------cceEEEeeec
Confidence 3568999998 999999999999998 7999998853
|
| >d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=84.80 E-value=1.9 Score=37.17 Aligned_cols=95 Identities=11% Similarity=0.054 Sum_probs=61.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEe-------------
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTAD------------- 75 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~D------------- 75 (452)
.+.+|.|+|- |..|..++.+|.+.+.. ..+...+.-+.+.|.... ....+....
T Consensus 14 ~~~ki~ViGv-GGaG~n~v~~l~~~~~~----~v~~iainTD~~~L~~~~--------~~~ki~ig~~~t~g~Gag~~p~ 80 (209)
T d2vapa1 14 TKAKITVVGC-GGAGNNTITRLKMEGIE----GAKTVAINTDAQQLIRTK--------ADKKILIGKKLTRGLGAGGNPK 80 (209)
T ss_dssp TCCCEEEEEE-HHHHHHHHHHHHHHTCT----TEEEEEEESBHHHHHTSC--------CSEEEECCTTTTTTBCCTTCHH
T ss_pred cCCcEEEEEe-CChHHHHHHHHHHcCCC----ceEEEEEeCCHHHHhcCC--------cchhcccccccccccccccchH
Confidence 3478999998 77799999999998742 266677776666664321 111222211
Q ss_pred ------CCCHHHHHHHHcCccEEeecCCCCCCCC----HHHHHHHHHhCCc
Q 012947 76 ------TTDPPSLHRLCSQTKLLLNCVGPYRLHG----DPVAAACVHSGCD 116 (452)
Q Consensus 76 ------l~d~~sl~~~~~~~dvVIn~aGp~~~~~----~~vv~ac~~~g~~ 116 (452)
..+.+.+.+.++++|+||-+||.-...| .-+.+.|.+.+..
T Consensus 81 ~g~~aa~e~~~~I~~~l~~~d~vfi~AGlGGGTGsgaapvia~~ake~g~l 131 (209)
T d2vapa1 81 IGEEAAKESAEEIKAAIQDSDMVFITCGLGGGTGTGSAPVVAEISKKIGAL 131 (209)
T ss_dssp HHHHHHHHTHHHHHHHHTTCSEEEEEEETTSSHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCccccHHHHHHHHHHHcCCc
Confidence 1234678888999999999998655443 2244555555553
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=84.80 E-value=0.48 Score=41.27 Aligned_cols=35 Identities=11% Similarity=0.123 Sum_probs=31.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT 52 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~ 52 (452)
..+|+|+|| |..|..+|..|+++| ++|.|..|+.+
T Consensus 4 ~~kV~IiGa-G~aGl~~A~~L~~~G-------~~v~v~Er~~~ 38 (265)
T d2voua1 4 TDRIAVVGG-SISGLTAALMLRDAG-------VDVDVYERSPQ 38 (265)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTT-------CEEEEECSSSS
T ss_pred CCcEEEECc-CHHHHHHHHHHHHCC-------CCEEEEeCCCC
Confidence 468999998 999999999999998 89999998653
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=84.69 E-value=0.46 Score=37.31 Aligned_cols=33 Identities=24% Similarity=0.313 Sum_probs=29.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP 51 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~ 51 (452)
.+++|.|| |++|-.+|..|.+.| .+|.++.|++
T Consensus 33 ~~vvIiGg-G~iG~E~A~~l~~~g-------~~Vtlv~~~~ 65 (122)
T d1xhca2 33 GEAIIIGG-GFIGLELAGNLAEAG-------YHVKLIHRGA 65 (122)
T ss_dssp SEEEEEEC-SHHHHHHHHHHHHTT-------CEEEEECSSS
T ss_pred CcEEEECC-cHHHHHHHHHhhccc-------ceEEEEeccc
Confidence 57899998 999999999999998 7999998864
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=84.31 E-value=0.38 Score=40.16 Aligned_cols=36 Identities=14% Similarity=0.085 Sum_probs=30.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCce-EEEEEecChh
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIK-SLALAGRNPT 52 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~-~v~iagR~~~ 52 (452)
++.+|+|+|| |.+|-.+|.+|+++| + .|.+..|+..
T Consensus 3 ~~~kVaIIGa-GpaGl~aA~~l~~~G-------~~~V~v~E~~~~ 39 (196)
T d1gtea4 3 YSAKIALLGA-GPASISCASFLARLG-------YSDITIFEKQEY 39 (196)
T ss_dssp GGCCEEEECC-SHHHHHHHHHHHHTT-------CCCEEEEESSSS
T ss_pred CCCEEEEECC-hHHHHHHHHHHHHCC-------CCeEEEEEecCc
Confidence 4568999998 999999999999998 5 4888888653
|
| >d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Ornithine cyclodeaminase-like domain: Archaeal alanine dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=84.27 E-value=1.6 Score=40.14 Aligned_cols=72 Identities=11% Similarity=0.145 Sum_probs=51.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
...+.|+|+ |..++.-++.|...-+ .-++.+.+|+.++.+++.+++.. ..+... . +. .+.+.++
T Consensus 125 ~~~l~iiGa-G~QA~~~~~al~~~~~-----i~~i~v~~r~~e~~~~~~~~~~~---~~~~~~-~--~~----~~a~~~a 188 (320)
T d1omoa_ 125 SSVFGFIGC-GTQAYFQLEALRRVFD-----IGEVKAYDVREKAAKKFVSYCED---RGISAS-V--QP----AEEASRC 188 (320)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHSC-----CCEEEEECSSHHHHHHHHHHHHH---TTCCEE-E--CC----HHHHTSS
T ss_pred ccEEEEecC-cccHHHHHHHHHHHhh-----hhhcccccCCHHHHHHHHHHHHh---cCCccc-c--ch----hhhhccc
Confidence 346888875 8999999999988763 25899999999999988887741 222222 1 22 3456789
Q ss_pred cEEeecCC
Q 012947 90 KLLLNCVG 97 (452)
Q Consensus 90 dvVIn~aG 97 (452)
|+||.|..
T Consensus 189 DiV~taT~ 196 (320)
T d1omoa_ 189 DVLVTTTP 196 (320)
T ss_dssp SEEEECCC
T ss_pred cEEEEecc
Confidence 99998763
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=84.10 E-value=0.65 Score=40.38 Aligned_cols=39 Identities=23% Similarity=0.244 Sum_probs=33.3
Q ss_pred CCCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh
Q 012947 6 QIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT 52 (452)
Q Consensus 6 ~~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~ 52 (452)
.+..+.+|+|+|| |..|-..|.+|+++| +++.+..++.+
T Consensus 45 ~~~~~k~VvIIGa-GpAGl~aA~~l~~~G-------~~v~l~E~~~~ 83 (233)
T d1djqa3 45 QTKNKDSVLIVGA-GPSGSEAARVLMESG-------YTVHLTDTAEK 83 (233)
T ss_dssp CCSSCCEEEEECC-SHHHHHHHHHHHHTT-------CEEEEECSSSS
T ss_pred cccCCceEEEEcc-cHHHHHHHHHHHHhc-------cceeeEeeccc
Confidence 3445689999998 999999999999998 89999987653
|
| >d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Hypothetical protein HI0933 species: Haemophilus influenzae [TaxId: 727]
Probab=83.96 E-value=0.28 Score=43.35 Aligned_cols=42 Identities=24% Similarity=0.347 Sum_probs=34.9
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHH
Q 012947 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQ 56 (452)
Q Consensus 7 ~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~ 56 (452)
|++.+||+|+|| |-.|...|-+|++.| .+|.|+.|+..-...
T Consensus 1 M~~~~DViIIGa-G~aGl~aA~~la~~G-------~~V~vlEk~~~~G~k 42 (253)
T d2gqfa1 1 MSQYSENIIIGA-GAAGLFCAAQLAKLG-------KSVTVFDNGKKIGRK 42 (253)
T ss_dssp CEEECSEEEECC-SHHHHHHHHHHHHTT-------CCEEEECSSSSSCHH
T ss_pred CCCCCcEEEECc-CHHHHHHHHHHHHCC-------CcEEEEecCCCCCCc
Confidence 345689999998 899999999999998 799999998654333
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=83.87 E-value=0.37 Score=42.07 Aligned_cols=33 Identities=18% Similarity=0.265 Sum_probs=29.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP 51 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~ 51 (452)
|||+|+|| |..|...|.+|+++| ++|.|.-++.
T Consensus 1 m~V~IIGa-G~aGL~aA~~L~~~G-------~~V~vlE~~~ 33 (347)
T d2ivda1 1 MNVAVVGG-GISGLAVAHHLRSRG-------TDAVLLESSA 33 (347)
T ss_dssp CCEEEECC-BHHHHHHHHHHHTTT-------CCEEEECSSS
T ss_pred CeEEEECC-CHHHHHHHHHHHhCC-------CCEEEEecCC
Confidence 58999998 999999999999998 7999998753
|
| >d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella frigidimarina [TaxId: 56812]
Probab=83.68 E-value=0.38 Score=43.52 Aligned_cols=36 Identities=22% Similarity=0.318 Sum_probs=31.8
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh
Q 012947 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP 51 (452)
Q Consensus 8 ~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~ 51 (452)
..++||+|+|+ |..|..++.+|+++| ++|+|+.+..
T Consensus 14 ~e~~DVlVIG~-G~aGl~aA~~la~~G-------~~V~lvEK~~ 49 (308)
T d1y0pa2 14 HDTVDVVVVGS-GGAGFSAAISATDSG-------AKVILIEKEP 49 (308)
T ss_dssp SEECSEEEECC-SHHHHHHHHHHHHTT-------CCEEEECSSS
T ss_pred CCcCCEEEECc-CHHHHHHHHHHHHCC-------CcEEEEecCC
Confidence 35799999998 999999999999998 7999998753
|
| >d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Biliverdin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=83.59 E-value=0.76 Score=38.08 Aligned_cols=112 Identities=17% Similarity=0.172 Sum_probs=62.9
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 012947 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 7 ~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
++.+++|.|+|. |.+|+.-++.|.+.... ..+.+.+....+. .. ..-.... . ++++++
T Consensus 4 ~~~k~kv~iIG~-G~~g~~h~~~l~~~~~~-----~~~~~~~~~~~~~------~~----~~~~~~~---~---~~~e~l 61 (172)
T d1lc0a1 4 NSGKFGVVVVGV-GRAGSVRLRDLKDPRSA-----AFLNLIGFVSRRE------LG----SLDEVRQ---I---SLEDAL 61 (172)
T ss_dssp CCCSEEEEEECC-SHHHHHHHHHHTSHHHH-----TTEEEEEEECSSC------CC----EETTEEB---C---CHHHHH
T ss_pred CCCCcEEEEEcC-CHHHHHHHHHHHhCCCC-----cEEEEEeccchHH------HH----HhhccCc---C---CHHHHH
Confidence 445789999997 89999888877654310 1234444322110 00 0001111 1 245565
Q ss_pred c--CccEEeecCCCCCCCCHHHHHHHHHhCCc-EEEe--cCcHHHHHHHHHHHHHHHHhCccEEE
Q 012947 87 S--QTKLLLNCVGPYRLHGDPVAAACVHSGCD-YLDI--SGEPEFMERMEARYHEKAVETGSLLV 146 (452)
Q Consensus 87 ~--~~dvVIn~aGp~~~~~~~vv~ac~~~g~~-yvDl--sge~~~~~~~~~~~~~~A~~~gv~iv 146 (452)
+ ++|+|+-+..+. .+ ..++..|++.|.| +++= +-...-. .++.+.+++++..+.
T Consensus 62 ~~~~iD~V~I~tp~~-~H-~~~~~~al~~gk~V~~EKP~a~~~~e~----~~l~~~a~~~~~~~~ 120 (172)
T d1lc0a1 62 RSQEIDVAYICSESS-SH-EDYIRQFLQAGKHVLVEYPMTLSFAAA----QELWELAAQKGRVLH 120 (172)
T ss_dssp HCSSEEEEEECSCGG-GH-HHHHHHHHHTTCEEEEESCSCSCHHHH----HHHHHHHHHTTCCEE
T ss_pred hCCCcchhhhccccc-cc-ccccccccccchhhhcCCCccccHHHH----HHHHHHHHHcCCeEE
Confidence 5 678888777443 33 6789999999998 3431 1122222 344566778887654
|
| >d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monooxygenase PhzS species: Pseudomonas aeruginosa [TaxId: 287]
Probab=83.56 E-value=0.54 Score=41.05 Aligned_cols=35 Identities=20% Similarity=0.209 Sum_probs=30.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP 51 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~ 51 (452)
++||+|+|| |..|..++..|.+.|- .+|.|.-|+.
T Consensus 1 ~~~V~IvGa-G~aGl~~A~~L~~~Gi------~~V~V~Er~~ 35 (288)
T d3c96a1 1 PIDILIAGA-GIGGLSCALALHQAGI------GKVTLLESSS 35 (288)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTC------SEEEEEESSS
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCC------CeEEEEeCCC
Confidence 589999998 9999999999999981 2888888865
|
| >d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=83.17 E-value=0.35 Score=44.16 Aligned_cols=33 Identities=30% Similarity=0.493 Sum_probs=29.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP 51 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~ 51 (452)
+||+|+|| |..|..+|++|++.| .+|.|..++.
T Consensus 2 ~dv~IIGa-G~sGl~~A~~L~~~g-------~~V~iiEk~~ 34 (298)
T d1i8ta1 2 YDYIIVGS-GLFGAVCANELKKLN-------KKVLVIEKRN 34 (298)
T ss_dssp EEEEEECC-SHHHHHHHHHHGGGT-------CCEEEECSSS
T ss_pred ccEEEECC-cHHHHHHHHHHHhCC-------CcEEEEECCC
Confidence 68999998 999999999999988 7899987754
|
| >d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Pyranose 2-oxidase species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]
Probab=82.88 E-value=0.51 Score=43.35 Aligned_cols=35 Identities=26% Similarity=0.303 Sum_probs=30.8
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec
Q 012947 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR 49 (452)
Q Consensus 7 ~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR 49 (452)
|+.+||+||+|+ |.-|..+|.+|++.| ++|.++-+
T Consensus 1 md~~yDviIVGs-G~aG~v~A~~La~~G-------~kVlvLEa 35 (379)
T d2f5va1 1 MDIKYDVVIVGS-GPIGCTYARELVGAG-------YKVAMFDI 35 (379)
T ss_dssp CCSEEEEEEECC-SHHHHHHHHHHHHTT-------CEEEEECS
T ss_pred CCCcccEEEECc-CHHHHHHHHHHhhCC-------CeEEEEec
Confidence 456799999997 999999999999988 89999865
|
| >d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Thermotoga maritima [TaxId: 2336]
Probab=82.86 E-value=2.8 Score=35.65 Aligned_cols=93 Identities=10% Similarity=0.161 Sum_probs=60.1
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEe---------------
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTAD--------------- 75 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~D--------------- 75 (452)
++|.|+|- |..|..++.+|.+.+... .+...+.-+.+.|+.. .....+....
T Consensus 1 ~kI~viGv-GGaG~n~v~~l~~~~~~~----v~~iainTD~~~L~~~--------~a~~ki~iG~~~t~G~G~g~~p~~g 67 (194)
T d1w5fa1 1 LKIKVIGV-GGAGNNAINRMIEIGIHG----VEFVAVNTDLQVLEAS--------NADVKIQIGENITRGLGAGGRPEIG 67 (194)
T ss_dssp CCEEEEEE-HHHHHHHHHHHHHHCCTT----EEEEEEESCHHHHHTC--------CCSEEEECCTTTTTTSCCTTCHHHH
T ss_pred CeEEEEEe-CchHHHHHHHHHHcCCCc----eEEEEEcCCHHHHhcC--------CcceEEecccccCCCcccccCchhh
Confidence 47889997 778999999999987522 5667777666655421 1122222221
Q ss_pred ----CCCHHHHHHHHcCccEEeecCCCCCCCC----HHHHHHHHHhCCc
Q 012947 76 ----TTDPPSLHRLCSQTKLLLNCVGPYRLHG----DPVAAACVHSGCD 116 (452)
Q Consensus 76 ----l~d~~sl~~~~~~~dvVIn~aGp~~~~~----~~vv~ac~~~g~~ 116 (452)
..+.+.+.+.++++|+||-+||.-...| ..+.+.|.+.+..
T Consensus 68 ~~aa~e~~~~I~~~l~~~d~vfi~AGlGGgTGtgaapviA~~ake~g~l 116 (194)
T d1w5fa1 68 EQAALESEEKIREVLQDTHMVFITAGFGGGTGTGASPVIAKIAKEMGIL 116 (194)
T ss_dssp HHHHHHTHHHHHHHTTTCSEEEEEEETTSSHHHHHHHHHHHHHHHTTCE
T ss_pred HhHHHHHHHHHHHHhcCCCeEEEEEecCCCcccchHHHHHHHHHHcCCc
Confidence 1245678888899999999998655443 2355666665554
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=82.51 E-value=0.79 Score=38.72 Aligned_cols=37 Identities=16% Similarity=0.134 Sum_probs=32.8
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh
Q 012947 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP 51 (452)
Q Consensus 7 ~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~ 51 (452)
...+.+|+|+|| |..|-..|.+|+++| ++|.+..++.
T Consensus 40 ~~~~k~V~IIGa-GPAGL~AA~~la~~G-------~~Vtl~E~~~ 76 (179)
T d1ps9a3 40 AVQKKNLAVVGA-GPAGLAFAINAAARG-------HQVTLFDAHS 76 (179)
T ss_dssp CSSCCEEEEECC-SHHHHHHHHHHHTTT-------CEEEEEESSS
T ss_pred CCCCcEEEEECc-cHHHHHHHHHHHhhc-------cceEEEeccC
Confidence 345689999998 999999999999999 8999999865
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=82.47 E-value=0.71 Score=37.41 Aligned_cols=35 Identities=17% Similarity=0.155 Sum_probs=29.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP 51 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~ 51 (452)
.+|+|+|| |++|-.++.+|.+.++ ..+|+++.+++
T Consensus 3 krivIvGg-G~~G~e~A~~l~~~~~-----~~~Vtlie~~~ 37 (186)
T d1fcda1 3 RKVVVVGG-GTGGATAAKYIKLADP-----SIEVTLIEPNT 37 (186)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHCT-----TSEEEEECSCS
T ss_pred CcEEEECc-cHHHHHHHHHHHHcCC-----CCcEEEEECCC
Confidence 48999998 9999999999999874 26888887764
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=82.47 E-value=0.86 Score=35.97 Aligned_cols=35 Identities=17% Similarity=0.091 Sum_probs=30.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP 51 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~ 51 (452)
.+.+++|+|| |++|-.+|..|.+.| .+|.++.|..
T Consensus 25 ~p~~vvIiGg-G~IG~E~A~~~~~~G-------~~Vtive~~~ 59 (125)
T d1ojta2 25 VPGKLLIIGG-GIIGLEMGTVYSTLG-------SRLDVVEMMD 59 (125)
T ss_dssp CCSEEEEESC-SHHHHHHHHHHHHHT-------CEEEEECSSS
T ss_pred cCCeEEEECC-CHHHHHHHHHhhcCC-------CEEEEEEeec
Confidence 4568999998 999999999999999 7999998754
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=82.38 E-value=0.82 Score=36.41 Aligned_cols=34 Identities=21% Similarity=0.333 Sum_probs=30.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP 51 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~ 51 (452)
..+++|+|| |++|-.+|..|.+.+ .+|.+..|+.
T Consensus 35 ~k~v~VIGg-G~iG~E~A~~l~~~g-------~~Vtvie~~~ 68 (133)
T d1q1ra2 35 DNRLVVIGG-GYIGLEVAATAIKAN-------MHVTLLDTAA 68 (133)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTT-------CEEEEECSSS
T ss_pred CCEEEEECC-chHHHHHHHHHHhhC-------cceeeeeecc
Confidence 468999998 999999999999998 7999998864
|
| >d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=82.20 E-value=0.76 Score=38.67 Aligned_cols=35 Identities=26% Similarity=0.351 Sum_probs=29.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP 51 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~ 51 (452)
|||+|+|| |++|-.+|..|.+.++ ..+|.+..|+.
T Consensus 1 ~KVvIIGg-G~~G~e~A~~l~~~~~-----~~~V~v~~~~~ 35 (198)
T d1nhpa1 1 MKVIVLGS-SHGGYEAVEELLNLHP-----DAEIQWYEKGD 35 (198)
T ss_dssp CEEEEECS-SHHHHHHHHHHHHHCT-----TSEEEEEESSS
T ss_pred CEEEEECC-cHHHHHHHHHHHhcCC-----CCeEEEEeCCC
Confidence 68999998 8999999999999874 26888888754
|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: N,N-dimethylglycine oxidase species: Arthrobacter globiformis [TaxId: 1665]
Probab=82.19 E-value=0.49 Score=42.52 Aligned_cols=33 Identities=21% Similarity=0.454 Sum_probs=28.6
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP 51 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~ 51 (452)
||+|+|| |.+|..+|.+|+++|. .+|+|+.|+.
T Consensus 3 dViIIGa-Gi~G~s~A~~La~~G~------~~V~liE~~~ 35 (305)
T d1pj5a2 3 RIVIIGA-GIVGTNLADELVTRGW------NNITVLDQGP 35 (305)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTC------CCEEEECSSC
T ss_pred CEEEECc-CHHHHHHHHHHHHcCC------CcEEEEeCCC
Confidence 7999998 8999999999999982 3699998863
|
| >d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=82.14 E-value=0.5 Score=40.52 Aligned_cols=35 Identities=20% Similarity=0.133 Sum_probs=31.2
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC
Q 012947 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN 50 (452)
Q Consensus 8 ~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~ 50 (452)
+.++|++|+|| |..|...+.++++.| .+|+++.++
T Consensus 3 ~~~~DlvVIG~-GpaGl~aA~~aa~~G-------~~V~liE~~ 37 (220)
T d1lvla1 3 TIQTTLLIIGG-GPGGYVAAIRAGQLG-------IPTVLVEGQ 37 (220)
T ss_dssp CEECSEEEECC-SHHHHHHHHHHHHHT-------CCEEEECSS
T ss_pred ccccCEEEECC-CHHHHHHHHHHHHCC-------CcEEEEecC
Confidence 45799999997 899999999999999 799999875
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=81.93 E-value=0.99 Score=37.72 Aligned_cols=18 Identities=28% Similarity=0.458 Sum_probs=14.1
Q ss_pred HHHHHHcCccEEeecCCC
Q 012947 81 SLHRLCSQTKLLLNCVGP 98 (452)
Q Consensus 81 sl~~~~~~~dvVIn~aGp 98 (452)
.+.+.++++|+||.++|-
T Consensus 73 ~l~~~~~~ADivI~a~G~ 90 (166)
T d1b0aa1 73 NLRHHVENADLLIVAVGK 90 (166)
T ss_dssp CHHHHHHHCSEEEECSCC
T ss_pred hhHHHHhhhhHhhhhccC
Confidence 356667889999999984
|
| >d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Lysine-specific histone demethylase 1, LSD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=81.59 E-value=0.8 Score=40.27 Aligned_cols=33 Identities=24% Similarity=0.317 Sum_probs=28.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR 49 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR 49 (452)
+..||+|+|| |..|...|.+|++.| ++|.|.-+
T Consensus 4 ~~~kViVIGa-G~aGL~aA~~L~~~G-------~~V~VlEa 36 (449)
T d2dw4a2 4 KTGKVIIIGS-GVSGLAAARQLQSFG-------MDVTLLEA 36 (449)
T ss_dssp CCCEEEEECC-BHHHHHHHHHHHHTT-------CEEEEECS
T ss_pred CCCcEEEECC-CHHHHHHHHHHHhCC-------CCEEEEeC
Confidence 4568999998 999999999999998 78888754
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=81.36 E-value=0.82 Score=38.64 Aligned_cols=40 Identities=18% Similarity=0.304 Sum_probs=33.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQ 59 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~ 59 (452)
|+|.|+| .||+|..++..|+ .+ ++|...+-++++++.+.+
T Consensus 1 MkI~ViG-lG~vGl~~a~~~a-~g-------~~V~g~Din~~~v~~l~~ 40 (196)
T d1dlja2 1 MKIAVAG-SGYVGLSLGVLLS-LQ-------NEVTIVDILPSKVDKINN 40 (196)
T ss_dssp CEEEEEC-CSHHHHHHHHHHT-TT-------SEEEEECSCHHHHHHHHT
T ss_pred CEEEEEC-CChhHHHHHHHHH-CC-------CcEEEEECCHHHHHHHhh
Confidence 6899997 5999999997664 56 799999999999877654
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=81.05 E-value=4 Score=34.17 Aligned_cols=86 Identities=14% Similarity=-0.009 Sum_probs=55.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
+..+|.|+|- |.||+.+++.+...+ .+|...++..... ...... + +++++++++
T Consensus 43 ~~~~vgiiG~-G~IG~~va~~l~~fg-------~~v~~~d~~~~~~-------------~~~~~~--~---~~l~ell~~ 96 (188)
T d1sc6a1 43 RGKKLGIIGY-GHIGTQLGILAESLG-------MYVYFYDIENKLP-------------LGNATQ--V---QHLSDLLNM 96 (188)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTT-------CEEEEECSSCCCC-------------CTTCEE--C---SCHHHHHHH
T ss_pred cceEEEEeec-ccchhhhhhhccccc-------ceEeeccccccch-------------hhhhhh--h---hhHHHHHhh
Confidence 4567888875 999999999998887 8998888754321 001111 1 357788888
Q ss_pred ccEEeecCCCCCC----CCHHHHHHHHHhCCcEEEec
Q 012947 89 TKLLLNCVGPYRL----HGDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 89 ~dvVIn~aGp~~~----~~~~vv~ac~~~g~~yvDls 121 (452)
+|+|+.++.-... .+...++.+ ..+.-.|+++
T Consensus 97 sDii~i~~plt~~T~~li~~~~l~~m-k~~a~lIN~a 132 (188)
T d1sc6a1 97 SDVVSLHVPENPSTKNMMGAKEISLM-KPGSLLINAS 132 (188)
T ss_dssp CSEEEECCCSSTTTTTCBCHHHHHHS-CTTEEEEECS
T ss_pred ccceeecccCCcchhhhccHHHHhhC-CCCCEEEEcC
Confidence 9988887732211 235555555 3455677775
|
| >d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Methanothermus fervidus [TaxId: 2180]
Probab=80.99 E-value=5.8 Score=32.75 Aligned_cols=97 Identities=13% Similarity=0.113 Sum_probs=54.2
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEE-EEecChhHHHHHHHHhCCCCCCCccEEEEe-----------CCCH
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLA-LAGRNPTRVKQALQWASPSHSLSIPILTAD-----------TTDP 79 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~-iagR~~~kl~~l~~~l~~~~~~~v~~v~~D-----------l~d~ 79 (452)
+|-|-| .|.||+.+++.+..+.. .+++ +-.+++.......-... ......+ +.-.
T Consensus 3 ~VgING-fGRIGR~v~R~l~~~~d------i~vvaInd~~~~~~~~~l~~~~------~~~~~~~~~~~~~~~~~~~~v~ 69 (171)
T d1cf2o1 3 AVAING-YGTVGKRVADAIAQQDD------MKVIGVSKTRPDFEARMALKKG------YDLYVAIPERVKLFEKAGIEVA 69 (171)
T ss_dssp EEEEEC-CSHHHHHHHHHHHTSSS------EEEEEEEESSCSHHHHHHHHTT------CCEEESSGGGHHHHHHTTCCCC
T ss_pred EEEEEc-CcHHHHHHHHHHHhCCC------ceEEEEecCCcHHHHHHHHhcC------CceEecccccceeecccCcccC
Confidence 577776 69999999999887763 5654 44555433222222221 1111111 1101
Q ss_pred HHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCc
Q 012947 80 PSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGE 123 (452)
Q Consensus 80 ~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge 123 (452)
..+..+.+++|+||-|.|.|.. ..-++.-+++|+..|-.+++
T Consensus 70 g~~~~~~~~vDvViEcTG~f~~--~~~~~~hl~~G~K~vi~~~~ 111 (171)
T d1cf2o1 70 GTVDDMLDEADIVIDCTPEGIG--AKNLKMYKEKGIKAIFQGGE 111 (171)
T ss_dssp EEHHHHHHTCSEEEECCSTTHH--HHHHHHHHHTTCEEEECTTS
T ss_pred CChhHhhcCCCEEEEccCCCCC--HHHHHHHHHcCCCEEEECCC
Confidence 2344556788999999887643 33455556667666655544
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=80.71 E-value=1.2 Score=34.42 Aligned_cols=34 Identities=12% Similarity=-0.109 Sum_probs=29.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP 51 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~ 51 (452)
..+++|.|| |++|-.++..|.+.+ .++.++.|.+
T Consensus 22 ~~~vvVvGg-G~ig~E~A~~l~~~g-------~~vt~i~~~~ 55 (121)
T d1mo9a2 22 GSTVVVVGG-SKTAVEYGCFFNATG-------RRTVMLVRTE 55 (121)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTT-------CEEEEECSSC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcc-------hhheEeeccc
Confidence 468999987 999999999999998 7899988864
|
| >d1rq2a1 c.32.1.1 (A:8-205) Cell-division protein FtsZ {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=80.58 E-value=3.7 Score=34.97 Aligned_cols=93 Identities=12% Similarity=0.097 Sum_probs=61.0
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEe----------------
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTAD---------------- 75 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~D---------------- 75 (452)
.|-|+|- |..|-.++.+|.+++.. ..+...+.-+...+... .....+..+.
T Consensus 3 ~IkViGv-GGaG~n~vn~~~~~~~~----~v~~iainTD~~~L~~~--------~~~~ki~iG~~~t~G~Gagg~p~~g~ 69 (198)
T d1rq2a1 3 VIKVVGI-GGGGVNAVNRMIEQGLK----GVEFIAINTDAQALLMS--------DADVKLDVGRDSTRGLGAGADPEVGR 69 (198)
T ss_dssp CEEEEEE-HHHHHHHHHHHHHTTCC----SEEEEEEESCHHHHHHC--------CCSEEEECCTTTC-----CCCHHHHH
T ss_pred eEEEEEe-CchHHHHHHHHHHcCCC----CceEEEEcchHHHHhcC--------CcchhhccccccccCCCcCcChhhhH
Confidence 3567776 56699999999998742 26777777666665431 1122222221
Q ss_pred ---CCCHHHHHHHHcCccEEeecCCCCCCCC---HH-HHHHHHHhCCcE
Q 012947 76 ---TTDPPSLHRLCSQTKLLLNCVGPYRLHG---DP-VAAACVHSGCDY 117 (452)
Q Consensus 76 ---l~d~~sl~~~~~~~dvVIn~aGp~~~~~---~~-vv~ac~~~g~~y 117 (452)
..+.+.+.++++++|+||-+||.-...| .| +.+.|.+.++..
T Consensus 70 ~aa~e~~~~I~~~l~~~d~vfi~AGlGGgTGtGaaPviA~iake~g~l~ 118 (198)
T d1rq2a1 70 KAAEDAKDEIEELLRGADMVFVTAGEGGGTGTGGAPVVASIARKLGALT 118 (198)
T ss_dssp HHHHHTHHHHHHHHTTCSEEEEEEETTSSHHHHHHHHHHHHHHHHTCEE
T ss_pred hhHHHHHHHHHHHhcCCCEEEEEEecCCCCCcchHHHHHHHHHHcCCcE
Confidence 1356788889999999999999765544 23 567777777653
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=80.37 E-value=0.8 Score=42.00 Aligned_cols=34 Identities=21% Similarity=0.381 Sum_probs=29.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP 51 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~ 51 (452)
..+|+|+|| |..|..+|.+|++.| ++|.|..++.
T Consensus 2 ~KKI~IIGa-G~sGL~aA~~L~k~G-------~~V~viEk~~ 35 (314)
T d2bi7a1 2 SKKILIVGA-GFSGAVIGRQLAEKG-------HQVHIIDQRD 35 (314)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHTTT-------CEEEEEESSS
T ss_pred CCEEEEECC-cHHHHHHHHHHHhCC-------CCEEEEECCC
Confidence 468999998 999999999999887 7999988754
|